Miyakogusa Predicted Gene

Lj0g3v0057259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057259.1 tr|A9RC35|A9RC35_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64386
,38.03,0.0000000000005,ACETYLTRANSFERASE-RELATED,NULL;
seg,NULL,FS325281.path2.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45670.1 | Symbols:  | calcineurin B subunit-related | chr2:1...   233   6e-62
AT2G45670.2 | Symbols:  | calcineurin B subunit-related | chr2:1...   229   6e-61

>AT2G45670.1 | Symbols:  | calcineurin B subunit-related |
           chr2:18815070-18818382 REVERSE LENGTH=539
          Length = 539

 Score =  233 bits (594), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 125/146 (85%), Gaps = 3/146 (2%)

Query: 49  PPAI---TVDPFRNDKARIKGVYDWVRTLVCVPLMLARLVLFGLCLAVGFVATKLALYGW 105
           PP +   TVDPFRN+   + G+Y+ ++ ++C+P+ L RLVLF   LAVG++ATKLAL GW
Sbjct: 66  PPVLGPTTVDPFRNNTPGVSGLYEAIKLVICLPIALIRLVLFAASLAVGYLATKLALAGW 125

Query: 106 KDKENPMPVWRCRVMWVTRICARCILFAFGYQWIKRKGRPAPRGIAPIIVSNHVSYIEPI 165
           KDKENPMP+WRCR+MW+TRIC RCILF+FGYQWI+RKG+PA R IAPI+VSNHVSYIEPI
Sbjct: 126 KDKENPMPLWRCRIMWITRICTRCILFSFGYQWIRRKGKPARREIAPIVVSNHVSYIEPI 185

Query: 166 FYFYELFATIVASESHDSLPFVGTII 191
           FYFYEL  TIVASESHDSLPFVGTII
Sbjct: 186 FYFYELSPTIVASESHDSLPFVGTII 211


>AT2G45670.2 | Symbols:  | calcineurin B subunit-related |
           chr2:18817080-18818382 REVERSE LENGTH=281
          Length = 281

 Score =  229 bits (585), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 125/146 (85%), Gaps = 3/146 (2%)

Query: 49  PPAI---TVDPFRNDKARIKGVYDWVRTLVCVPLMLARLVLFGLCLAVGFVATKLALYGW 105
           PP +   TVDPFRN+   + G+Y+ ++ ++C+P+ L RLVLF   LAVG++ATKLAL GW
Sbjct: 66  PPVLGPTTVDPFRNNTPGVSGLYEAIKLVICLPIALIRLVLFAASLAVGYLATKLALAGW 125

Query: 106 KDKENPMPVWRCRVMWVTRICARCILFAFGYQWIKRKGRPAPRGIAPIIVSNHVSYIEPI 165
           KDKENPMP+WRCR+MW+TRIC RCILF+FGYQWI+RKG+PA R IAPI+VSNHVSYIEPI
Sbjct: 126 KDKENPMPLWRCRIMWITRICTRCILFSFGYQWIRRKGKPARREIAPIVVSNHVSYIEPI 185

Query: 166 FYFYELFATIVASESHDSLPFVGTII 191
           FYFYEL  TIVASESHDSLPFVGTII
Sbjct: 186 FYFYELSPTIVASESHDSLPFVGTII 211