Miyakogusa Predicted Gene
- Lj0g3v0057179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0057179.1 tr|G7ZYM9|G7ZYM9_MEDTR FBD-associated F-box
protein OS=Medicago truncatula GN=MTR_076s0012 PE=4
SV=1,38.3,2e-19,domain in FBox and BRCT domain containing pl,FBD;
FAMILY NOT NAMED,NULL; FBD,FBD,CUFF.2502.1
(141 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54910.3 | Symbols: | RNI-like superfamily protein | chr3:20... 79 1e-15
AT3G54910.2 | Symbols: | RNI-like superfamily protein | chr3:20... 79 1e-15
AT3G54910.1 | Symbols: | RNI-like superfamily protein | chr3:20... 79 1e-15
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 73 5e-14
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 73 5e-14
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 1e-12
AT3G26920.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 67 3e-12
AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains cont... 67 4e-12
AT3G52690.1 | Symbols: | RNI-like superfamily protein | chr3:19... 64 3e-11
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 3e-11
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 3e-11
AT4G13965.1 | Symbols: | Protein with RNI-like/FBD-like domains... 64 5e-11
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 63 6e-11
AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 62 9e-11
AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 61 2e-10
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 3e-10
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 3e-10
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 3e-10
AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 3e-10
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 3e-10
AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains... 59 2e-09
AT3G49020.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 58 2e-09
AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 58 2e-09
AT5G56452.2 | Symbols: | FBD-like domain family protein | chr5:... 57 3e-09
AT5G56452.1 | Symbols: | FBD-like domain family protein | chr5:... 57 3e-09
AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 57 4e-09
AT3G26930.1 | Symbols: | Protein with RNI-like/FBD-like domains... 56 8e-09
AT1G55030.1 | Symbols: | RNI-like superfamily protein | chr1:20... 56 8e-09
AT5G56800.1 | Symbols: | Protein with RNI-like/FBD-like domains... 55 1e-08
AT5G56325.1 | Symbols: | FBD-like domain family protein | chr5:... 55 2e-08
AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 3e-08
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 3e-08
AT5G38580.1 | Symbols: | FBD-like domain family protein | chr5:... 54 4e-08
AT3G53550.1 | Symbols: | FBD-like domain family protein | chr3:... 54 4e-08
AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 4e-08
AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 54 5e-08
AT5G38565.1 | Symbols: | F-box/FBD-like domains containing prot... 53 6e-08
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 7e-08
AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 53 8e-08
AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 52 9e-08
AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 1e-07
AT5G56430.1 | Symbols: | F-box/FBD-like domains containing prot... 51 2e-07
AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 3e-07
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 6e-07
AT1G51055.1 | Symbols: | FBD-like domain family protein | chr1:... 50 6e-07
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 8e-07
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 8e-07
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 49 1e-06
AT3G55670.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD (Inter... 48 2e-06
AT5G44850.1 | Symbols: | Protein with RNI-like/FBD-like domains... 46 9e-06
>AT3G54910.3 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVL-ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F+ L HL+L R H S +L LL LQ L +++ D H H W P
Sbjct: 246 VFNQLKHLKLC--RCKGHSSDLLVRLLKDSSNLQALDLSEMDYHENH----DILYWHQPS 299
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKELS 127
+VP+C+LL L+ L+ YRGT E + A Y + N LK+ TI + + + +F MLKEL+
Sbjct: 300 TVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKSCVFDDERFDMLKELA 359
Query: 128 SCKRGSATCRLCFK 141
R S TC+L F
Sbjct: 360 LSSRASTTCQLVFD 373
>AT3G54910.2 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVL-ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F+ L HL+L R H S +L LL LQ L +++ D H H W P
Sbjct: 246 VFNQLKHLKLC--RCKGHSSDLLVRLLKDSSNLQALDLSEMDYHENH----DILYWHQPS 299
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKELS 127
+VP+C+LL L+ L+ YRGT E + A Y + N LK+ TI + + + +F MLKEL+
Sbjct: 300 TVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKSCVFDDERFDMLKELA 359
Query: 128 SCKRGSATCRLCFK 141
R S TC+L F
Sbjct: 360 LSSRASTTCQLVFD 373
>AT3G54910.1 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVL-ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F+ L HL+L R H S +L LL LQ L +++ D H H W P
Sbjct: 246 VFNQLKHLKLC--RCKGHSSDLLVRLLKDSSNLQALDLSEMDYHENH----DILYWHQPS 299
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKELS 127
+VP+C+LL L+ L+ YRGT E + A Y + N LK+ TI + + + +F MLKEL+
Sbjct: 300 TVPECMLLSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKSCVFDDERFDMLKELA 359
Query: 128 SCKRGSATCRLCFK 141
R S TC+L F
Sbjct: 360 LSSRASTTCQLVFD 373
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 73.2 bits (178), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
MF+ L+ L++ Y R W+ + +L + PKLQ+L + +FH + + G+W P
Sbjct: 307 MFYQLVSLEM-YTREAEWWNLLTLMLENSPKLQVLKLTDRS-QNFHKDGLVSGKWNEPKD 364
Query: 69 VPQCLLLHLKRCYLNHYR-GTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKE-- 125
VP+CLL L+ + G + E E A Y + NGR LK T ST ++ + LKE
Sbjct: 365 VPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELNKLKERR 424
Query: 126 -----LSSCKRGSATCRLCFK 141
L R S +C+L FK
Sbjct: 425 KVLNGLDGVVRASNSCQLVFK 445
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 73.2 bits (178), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
MF+ L+ L++ Y R W+ + +L + PKLQ+L + +FH + + G+W P
Sbjct: 307 MFYQLVSLEM-YTREAEWWNLLTLMLENSPKLQVLKLTDRS-QNFHKDGLVSGKWNEPKD 364
Query: 69 VPQCLLLHLKRCYLNHYR-GTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKE-- 125
VP+CLL L+ + G + E E A Y + NGR LK T ST ++ + LKE
Sbjct: 365 VPECLLSQLETFVWRRFDWGREEEKEIATYILKNGRRLKKATFSTNPIESEELNKLKERR 424
Query: 126 -----LSSCKRGSATCRLCFK 141
L R S +C+L FK
Sbjct: 425 KVLNGLDGVVRASNSCQLVFK 445
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 68.6 bits (166), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
+F+ L+ L++ Y R W + +L H PKLQ+L + + FH + G+W P
Sbjct: 304 IFYQLVSLEM-YTREIDWWDLLTLMLEHSPKLQVLKLTDNCV-KFHKNGLPGGKWNEPKY 361
Query: 69 VPQCLLLHLKRCYLNHYR-GTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLK--- 124
VP+CLL HL+ + G + E E A Y + N R L T ST + + LK
Sbjct: 362 VPECLLSHLETFVWRRFDWGREEEKEIATYILKNARRLNKATFSTNPVNSEELDKLKERR 421
Query: 125 ----ELSSCKRGSATCRLCFK 141
EL R S +C+ FK
Sbjct: 422 KVHNELDGVVRASNSCQFVFK 442
>AT3G26920.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr3:9921241-9922429 FORWARD
LENGTH=340
Length = 340
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 14/137 (10%)
Query: 10 FHNLIHLQLVYQRYNAHWSQVLEL-LHHCPKLQLLAINQPDIHSFHFEQIQK--GEWQLP 66
F++L +L+L Y W +L L L P LQ+L I F Q Q+ +W P
Sbjct: 211 FYHLTYLEL--STYKPKWWNLLTLMLDTSPNLQVLKI-----FDFMTSQEQRPWEKWNEP 263
Query: 67 PSVPQCLLLHLKRCYLNHYRGT-KPEFEFARYSMHNGRFLKSMTISTGIAKNP--KFKML 123
+VP+CLLLHL+ Y G + E E A+Y + N R LK T S I NP + +M+
Sbjct: 264 KNVPECLLLHLETFVWTCYEGKLENEIELAKYILRNARRLKKATFSI-IEINPDKRVEMV 322
Query: 124 KELSSCKRGSATCRLCF 140
EL S R S +C+L F
Sbjct: 323 GELKSVVRASNSCQLVF 339
>AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr3:9921241-9922429 FORWARD
LENGTH=301
Length = 301
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 14/137 (10%)
Query: 10 FHNLIHLQLVYQRYNAHWSQVLEL-LHHCPKLQLLAINQPDIHSFHFEQIQK--GEWQLP 66
F++L +L+L Y W +L L L P LQ+L I F Q Q+ +W P
Sbjct: 172 FYHLTYLEL--STYKPKWWNLLTLMLDTSPNLQVLKI-----FDFMTSQEQRPWEKWNEP 224
Query: 67 PSVPQCLLLHLKRCYLNHYRGT-KPEFEFARYSMHNGRFLKSMTISTGIAKNP--KFKML 123
+VP+CLLLHL+ Y G + E E A+Y + N R LK T S I NP + +M+
Sbjct: 225 KNVPECLLLHLETFVWTCYEGKLENEIELAKYILRNARRLKKATFSI-IEINPDKRVEMV 283
Query: 124 KELSSCKRGSATCRLCF 140
EL S R S +C+L F
Sbjct: 284 GELKSVVRASNSCQLVF 300
>AT3G52690.1 | Symbols: | RNI-like superfamily protein |
chr3:19530736-19531811 FORWARD LENGTH=299
Length = 299
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Query: 3 HCNSFPMFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGE 62
C +F+ L+HL+ +Y W+ + +L PKLQ+L + ++ F + G+
Sbjct: 154 ECPIDSIFYQLVHLE-IYTCKEEWWNLLKLMLDSSPKLQVLKLIGKNL-DFKKVGMVGGK 211
Query: 63 WQLPPSVPQCLLLHLKR-CYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKN---- 117
W P +VP+CLL LK + +++ ++ E E A Y + N R LK+++ ST +
Sbjct: 212 WNEPKNVPECLLSQLKMFVWTSYHWESEVEKEVATYILKNARQLKNVSFSTRPIHSKEHN 271
Query: 118 ---PKFKMLKELSSCKRGSATCRLCF 140
K KMLKEL R S++C L F
Sbjct: 272 KLEEKCKMLKELDGVVRASSSCHLVF 297
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
+FH L HL+ + W ++ +L H PKL+ L +N+ ++ + W+ P S
Sbjct: 281 IFHQLEHLE--FCSCCTEWDILMFMLKHSPKLRSLKLNETHGYTIVSQSDPMFHWEEPSS 338
Query: 69 VPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNP---------- 118
VP+ L+ L+ +YRG K E E A + + + R LK T S K
Sbjct: 339 VPETLMFVLETLEWRNYRGLKMENELASFLLKHSRRLKIATFSPADCKQVRIELRTTVGM 398
Query: 119 KFKMLKELSSCKRGSATCRLCF 140
K+++L EL+ RGSA C L F
Sbjct: 399 KYRILMELARLPRGSAECELVF 420
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
+FH L HL+ + W ++ +L H PKL+ L +N+ ++ + W+ P S
Sbjct: 281 IFHQLEHLE--FCSCCTEWDILMFMLKHSPKLRSLKLNETHGYTIVSQSDPMFHWEEPSS 338
Query: 69 VPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNP---------- 118
VP+ L+ L+ +YRG K E E A + + + R LK T S K
Sbjct: 339 VPETLMFVLETLEWRNYRGLKMENELASFLLKHSRRLKIATFSPADCKQVRIELRTTVGM 398
Query: 119 KFKMLKELSSCKRGSATCRLCF 140
K+++L EL+ RGSA C L F
Sbjct: 399 KYRILMELARLPRGSAECELVF 420
>AT4G13965.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr4:8066138-8067435 REVERSE LENGTH=376
Length = 376
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 14 IHLQLVYQRYNAHWSQVLELL----HHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSV 69
I QLVY H ++ L LL + PKLQ+L + P S+ + + G+W P V
Sbjct: 245 IFYQLVYLELLTHEAECLNLLTLMLNSSPKLQILKLLSPKYQSWKKDVV--GKWNKPKIV 302
Query: 70 PQCLLLHLKRCYLNHYRGTK-PEFEFARYSMHNGRFLKSMT-ISTGIAKNPKFKMLKELS 127
P+CLL HL+ Y + E E A+Y + N LK T S I+ + KM+K L+
Sbjct: 303 PECLLFHLETFMWKGYEWKRNDETEVAKYILSNTNRLKRATFFSKPISSEERVKMVKNLN 362
Query: 128 SCKRGSATCRLCFK 141
S R +C+L K
Sbjct: 363 SVVRALNSCQLLIK 376
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLE-LLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+FH L+ L + W +L +L PKL+ L + + ++ H + W P
Sbjct: 293 VFHCLVRLTIC--TCETEWLNLLMCVLRDSPKLRELKLVKNHVYRSHQ---PRPCWNEPS 347
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAK-NPKFKMLKEL 126
+VP+CLL L+ Y GT+ E E A + + +G LK +TIS+ N KF+MLKEL
Sbjct: 348 AVPECLLTSLETLEWVKYEGTEEEKEVAAFILRSGSCLKKVTISSKSTDINKKFEMLKEL 407
Query: 127 SSCKRGSATCRLCFK 141
S R S TC++ F
Sbjct: 408 SLLFRRSPTCQIAFD 422
>AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=443
Length = 443
Score = 62.4 bits (150), Expect = 9e-11, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 7 FP---MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKG-- 61
FP +F L++L V + W+ + +L PKLQ+L + I+KG
Sbjct: 303 FPTGKVFDQLVYLD-VLTKEREWWNLLSRMLESSPKLQILKLTG-------LSCIEKGLD 354
Query: 62 --EWQLPPSVPQCLLLHLKRCYLNHYRGTK-PEFEFARYSMHNGRFLKSMTISTGIAK-- 116
W P VP+CLL HL++ Y + E E A Y + N R LK T ST
Sbjct: 355 GQNWNPPKCVPECLLFHLEKFLWTGYEWQRGDEKEVATYILENARLLKKATFSTKRIDLE 414
Query: 117 --NPKFKMLKELSSCKRGSATCRLCF 140
+ +ML EL+S R S +C L F
Sbjct: 415 NLEKRREMLNELASVARASDSCHLVF 440
>AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr3:19525247-19526737 FORWARD LENGTH=384
Length = 384
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 19 VYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLK 78
++ R W+ + +L PKLQ+L + + + +W P VP+CLL HL+
Sbjct: 253 MHTRREEWWNLLTVMLDSSPKLQVLKLID-HTQDVSKDNVVSEKWNEPKYVPECLLSHLE 311
Query: 79 R-CYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKF-------KMLKELSSCK 130
++ + + E E A Y + N R+LK TIST ++ KML EL S
Sbjct: 312 TFVWIRYDWEREEEKEVATYILRNARWLKKGTISTNPIESKDLEKLEERRKMLNELDSVV 371
Query: 131 RGSATCRLCFK 141
R S +C L F+
Sbjct: 372 RASNSCNLVFE 382
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 9 MFHNLIHLQLVY--QRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLP 66
+F L+HL+L R+ W + L+ PKL++L + Q I + W+
Sbjct: 293 IFSQLVHLELCTCAPRW---WDLLTRLIEDSPKLRVLKLRQKHIRR---APSPRASWK-Q 345
Query: 67 PSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKN--PKFKMLK 124
P++P+CLL HL+ Y G++ + E A + + + LK+ IS K +MLK
Sbjct: 346 PALPKCLLFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLK 405
Query: 125 ELSSCKRGSATCRLCFK 141
+LSS RGS+TC L F
Sbjct: 406 DLSSSPRGSSTCELLFD 422
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 9 MFHNLIHLQLVY--QRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLP 66
+F L+HL+L R+ W + L+ PKL++L + Q I + W+
Sbjct: 293 IFSQLVHLELCTCAPRW---WDLLTRLIEDSPKLRVLKLRQKHIRR---APSPRASWK-Q 345
Query: 67 PSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKN--PKFKMLK 124
P++P+CLL HL+ Y G++ + E A + + + LK+ IS K +MLK
Sbjct: 346 PALPKCLLFHLETFKWELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLK 405
Query: 125 ELSSCKRGSATCRLCFK 141
+LSS RGS+TC L F
Sbjct: 406 DLSSSPRGSSTCELLFD 422
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 4 CNSFPMFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGE- 62
C S +F L+HL L W + +L PKLQ L + I H + E
Sbjct: 282 CPSGIIFSQLVHLNL-STVVKGWWDLLTSMLQDSPKLQSLKL----IDKQHESGLCGIET 336
Query: 63 ---WQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTIS-TGIAKNP 118
W+LP SVP+CLL L+ Y+G + + E A Y + N L++ S
Sbjct: 337 PIGWKLPSSVPECLLFSLEAFEWIGYKGRRGDREVATYVLKNAACLRTAKFSPESTDVGE 396
Query: 119 KFKMLKELSSCKRGSATCRLCFK 141
K+ MLKEL+S S + +L F
Sbjct: 397 KYHMLKELASVPTASTSSKLLFD 419
>AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:18845199-18846673
REVERSE LENGTH=427
Length = 427
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 10 FHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQP--DIHSFHFEQIQKGEWQLPP 67
F+ L+HL+L W + +L PKLQ+L I + + H + + I++ W+ P
Sbjct: 293 FYQLVHLELCGDAL-MWWDLLTWMLQSSPKLQVLKIYECKCEEHDYLDDPIEE-HWEEPS 350
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTG---IAKNPKFKMLK 124
SVPQCLL HL +Y E + Y + N R LK+ T S K + + L
Sbjct: 351 SVPQCLLFHLNIFEWKYYNAGDEEKKVVAYILKNARQLKTATFSAASYLYPKEERSRELN 410
Query: 125 ELSSCKRGSATCRL 138
EL R S++C+L
Sbjct: 411 ELVYMARASSSCQL 424
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 9 MFHNLIHLQL-VYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFE---QIQKGEWQ 64
+FH L++L+L +++R N ++L LL H P LQ L +N+ + S + ++K
Sbjct: 290 IFHQLLYLELHLHKRLNG--DRILSLLKHSPNLQTLKLNEKPLRSIKDQPNISVRK---- 343
Query: 65 LPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIA-------KN 117
P SVP+CL HL+ Y G + E A Y + N L + TIS + +
Sbjct: 344 -PNSVPECLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRYFSSSRFRHHQK 402
Query: 118 PKFKMLKELSSCKRGSATCRLCFK 141
K+++EL S + S +C+L +
Sbjct: 403 KDLKIVEELKSITKASTSCQLVLQ 426
>AT5G62970.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:25272033-25273537 FORWARD LENGTH=449
Length = 449
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLE-LLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F+ L HL + +NA+WS++L LL PKLQ L ++ + W P
Sbjct: 317 VFNELEHLN--FHIHNAYWSELLYWLLKASPKLQNLEFDEQCSRDGTMGTLAVF-WNQPN 373
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNP--KFKMLKE 125
SVPQCLL L+ + Y G+ + A Y + R LK TIS G +P K KM +
Sbjct: 374 SVPQCLLSTLQTFEWSGYPGSVQGKDLATYILRKSRQLKIATISIGYGLDPQQKLKMEMD 433
Query: 126 LSSCKRGSATCRLCF 140
+ R S TC+ F
Sbjct: 434 VKFSFRASPTCKRVF 448
>AT3G49020.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18169079-18170660
FORWARD LENGTH=447
Length = 447
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLE-LLHHCPKLQLLAINQPDIHSFHFEQIQKG-EWQLP 66
+F+ L+ L+L + Y+ W +L +L PKLQ+L + P + F E G EW P
Sbjct: 307 IFYQLLSLEL--RAYSYEWWNLLWFMLDSSPKLQILKLVDP--YQFPKEDCSVGWEWSRP 362
Query: 67 PSVPQCLLLHLKRCYLNHYRGTK-PEFEFARYSMHNGRFLKSMTISTGIAKNPKF----- 120
VP+CLL HL+ Y + E A Y + N R LK T+ST + +
Sbjct: 363 KCVPECLLFHLETFVWTRYEWQREDEKAVATYILKNARCLKKATLSTKPIGSEELEKLGK 422
Query: 121 --KMLKELSSCKRGSATCRLCFK 141
+ML EL++ S +C L F+
Sbjct: 423 RREMLNELATQASPSNSCNLVFE 445
>AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22855742-22857117
REVERSE LENGTH=430
Length = 430
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQK-------- 60
+F+ L+ L L + W +++ L+H PKL++L Q + K
Sbjct: 290 VFNQLVSLSLCT--CSLGWCRLI--LNHTPKLRVLRFEQRQAKFYQLLDPLKRCCSSSVD 345
Query: 61 --GEWQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTIST--GIAK 116
+W+ P SVP+CL+ L+ Y+G + E + Y + N R LK+M I +
Sbjct: 346 VQTQWEQPSSVPKCLISSLETVEWIDYKGREVEKKVVMYLLENSRQLKTMAIRSLKSTND 405
Query: 117 NPKFKMLKELSSCKRGSATCRLCF 140
N K KML+ELSS R C L F
Sbjct: 406 NEKLKMLQELSSIHRICTKCGLSF 429
>AT5G56452.2 | Symbols: | FBD-like domain family protein |
chr5:22860483-22861336 REVERSE LENGTH=226
Length = 226
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 10 FHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSV 69
++L+HL+L Q W + +L + PKLQ+L + + F I+ W+ P SV
Sbjct: 96 IYHLVHLELC-QDSPGWWGLLTWMLDNSPKLQVLKLGKCKERCF-ISSIE-SHWRGPISV 152
Query: 70 PQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTG--IAKNPKFKMLKELS 127
P+CL LHL +Y G E + Y + N R LK+ S +F+ KE+
Sbjct: 153 PECLRLHLSTFEWKYYNGRDEEKKIVAYILKNARQLKTAAFSVQRVFPMKERFQKHKEVV 212
Query: 128 SCKRGSATCRL 138
S R S++C+L
Sbjct: 213 SLHRASSSCKL 223
>AT5G56452.1 | Symbols: | FBD-like domain family protein |
chr5:22860483-22861336 REVERSE LENGTH=227
Length = 227
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 10 FHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSV 69
++L+HL+L Q W + +L + PKLQ+L + + F I+ W+ P SV
Sbjct: 97 IYHLVHLELC-QDSPGWWGLLTWMLDNSPKLQVLKLGKCKERCF-ISSIE-SHWRGPISV 153
Query: 70 PQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTG--IAKNPKFKMLKELS 127
P+CL LHL +Y G E + Y + N R LK+ S +F+ KE+
Sbjct: 154 PECLRLHLSTFEWKYYNGRDEEKKIVAYILKNARQLKTAAFSVQRVFPMKERFQKHKEVV 213
Query: 128 SCKRGSATCRL 138
S R S++C+L
Sbjct: 214 SLHRASSSCKL 224
>AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr4:6453085-6454209 REVERSE
LENGTH=322
Length = 322
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 55 FEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGI 114
+E ++ W P VP+CLL L++ + Y G + + A Y + N L++ TI +
Sbjct: 236 YENMRMFPWNQPSIVPECLLSSLQKFTWSQYLGRTQDRDIAVYILKNACCLRNATIDSYT 295
Query: 115 AKNPKFKMLKELSSCKRGSATCRLCF 140
P+ KM+KEL+ R S TC L F
Sbjct: 296 CLVPELKMIKELTRSSRASTTCELNF 321
>AT3G26930.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr3:9925931-9927351 FORWARD LENGTH=409
Length = 409
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
+F+ L+ L+L Y W+ ++ +L PKLQ+L +N S + W P +
Sbjct: 261 IFYQLVSLEL-YTNKAEWWNLLVLMLDSSPKLQVLKLNGK--LSGENNHLASMNWDQPKN 317
Query: 69 VPQCLLLHLKR-CYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKN-------PKF 120
+P CLL +L+ + R + E E A+Y + N LK T + I +
Sbjct: 318 IPGCLLFNLETFIWKGCKRIGEDEKEVAKYILRNTNRLKRATFTREIYEENNSQDMFENL 377
Query: 121 KMLKELSSCKRGSATCRLCFK 141
+M++EL S R S +C+L F+
Sbjct: 378 EMVEELESVVRASKSCKLVFE 398
>AT1G55030.1 | Symbols: | RNI-like superfamily protein |
chr1:20530417-20531768 REVERSE LENGTH=422
Length = 422
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 6 SFP---MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGE 62
+FP +F+ L++L++ + + W + +LH PKLQ+L + D ++ + GE
Sbjct: 286 TFPTGIIFNQLVYLEICTNK-TSWWKLLPLMLHSSPKLQVLKLID-DTDGMNYVE-ASGE 342
Query: 63 WQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTIS-TGIAKNPKFK 121
W P +VP+C L HL++ Y+ + E E A+Y + N LK S GI+ +
Sbjct: 343 WNQPKNVPEC-LHHLEKFIWEGYKWKREEIEVAKYILKNTNRLKRAIFSLKGISSEDRLV 401
Query: 122 MLKELSSCKRGSA-TCRLCF 140
++++L S + +C+ F
Sbjct: 402 VVEDLKSVVMATTNSCQFQF 421
>AT5G56800.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:22972989-22974208 FORWARD LENGTH=344
Length = 344
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 27 WSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYR 86
W+ + +L P+LQ+L + + E + W P SVP+CL HL+ HY+
Sbjct: 234 WNLLNRILEDAPRLQVLKLKLGNCVQCSTELMDY--WNEPCSVPKCLSSHLEIFEWRHYK 291
Query: 87 GTKPEFEFARYSMHNGRFLKSMTISTG-IAKNPKFKMLKELSSCKRGSATCRLCFK 141
GTK E + A+Y + LK S+ I KN FK L+ + RGS C L F+
Sbjct: 292 GTKQERKVAKYILAKASCLKVAIFSSVCIEKNLIFKKLENVD---RGSKACELVFQ 344
>AT5G56325.1 | Symbols: | FBD-like domain family protein |
chr5:22812213-22813193 FORWARD LENGTH=264
Length = 264
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVL-ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F+ L+HL+L W +L LL + P L++L I Q +H + Q + W P
Sbjct: 134 IFNRLVHLRLC--TCETEWINLLMRLLRNSPSLRVLEIEQ--VHYLRYYQ-PRPCWSEPS 188
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTIST--GIAKNPKFKMLKE 125
S+P+CL +L+ HY G + E E A + + + LK TI I + K +M KE
Sbjct: 189 SIPECLTHNLETFKWEHYYGAEEEKEVAAFILRSSICLKKATIILHRSIVHDEKLEMNKE 248
Query: 126 LSSCKRGSATCRLCF 140
LS S C+L F
Sbjct: 249 LSLLPICSPICQLAF 263
>AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13326853-13328315
FORWARD LENGTH=431
Length = 431
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGE-WQLPP 67
+FH L+ L + W + +L PKL+ L + H ++ W+ P
Sbjct: 297 IFHMLVDLTICTCT-QGWWDLLTHMLQGSPKLRFLTLTND--HCRELPSLETPACWKRPS 353
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKS-MTISTGIAKNPKFKMLKEL 126
SVP CLL L+ + Y+G + + E +Y + N LK + IS KF ML+EL
Sbjct: 354 SVPACLLSSLQAFTWSGYKGRQGDKEVVKYVLRNATGLKKRIFISKSNDFGEKFCMLQEL 413
Query: 127 SSCKRGSATCRLCFK 141
+S S +C+L F
Sbjct: 414 ASVPTPSPSCQLLFD 428
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Query: 27 WSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYR 86
W+ + +L PKLQ+L + ++ S QI + +W P VP+CLL HL+ Y
Sbjct: 292 WNLLTFMLEASPKLQILKLTDLNMSSTKGNQIGQ-KWIQPKCVPECLLFHLETFVWTGYE 350
Query: 87 -GTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLK-------ELSSCKRGSATCRL 138
+ E E ARY + N LK T ST + K K+ K EL+S R S
Sbjct: 351 WQRRDEKEVARYILRNTTSLKKATFSTKPIEPVKLKVFKKRREILNELASLGRASNPSDF 410
Query: 139 CFK 141
F+
Sbjct: 411 VFE 413
>AT5G38580.1 | Symbols: | FBD-like domain family protein |
chr5:15451164-15451842 REVERSE LENGTH=168
Length = 168
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 32 ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYRGTKPE 91
+LL P L++L I+ H E+ W P VP+CLL L+ + Y G + +
Sbjct: 54 QLLKDSPNLRILDISVVKDHGTD-ERNGMVSWNQPNFVPECLLSSLQTLLWSRYFGRQQD 112
Query: 92 FEFARYSMHNGRFLKSMTI--STGIAKNPKFKMLKELSSCKRGSATCRLCF 140
+ A Y + N LK+ TI T P +M+KEL+ R S C+L F
Sbjct: 113 RDIAVYILKNACHLKTATILADTDEHDVPNLQMIKELALSLRTSVICQLVF 163
>AT3G53550.1 | Symbols: | FBD-like domain family protein |
chr3:19856870-19858308 FORWARD LENGTH=256
Length = 256
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 41 QLLAINQPD-IHSF-HFEQIQKG---EWQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFA 95
+L+ +N+ D + S F+Q++K W P SVP+CL HLK YRG K E E
Sbjct: 138 KLIILNELDWLESLMSFKQLEKELPLSWNQPSSVPECLSNHLKIFEWKGYRGRKEEKEIV 197
Query: 96 RYSMHNGRFLKSMTISTGIAKNPKFKMLKELSSCKRGSATCRLCF 140
RY + N + L+ + +S N K +KEL S R S + L F
Sbjct: 198 RYILANSKCLRRIGVSLKSTNN--HKTIKELESMSRVSTSSHLLF 240
>AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22974520-22975992
FORWARD LENGTH=435
Length = 435
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 1 MYHCNSFPMFHNLIHLQL-VYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQ 59
++H + + L+HL+L +Y + ++ L P LQ L +N H + + Q
Sbjct: 296 VFHLDDRFISKQLLHLKLDIYDNFQSNLLLSLL--KDLPNLQSLKLNHS--HPSYNVEDQ 351
Query: 60 KGEWQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTIST-GIAKNP 118
P SVP+CL HL+ Y GT E A Y + N R LK+ TIS
Sbjct: 352 PCSVSEPSSVPECLSFHLETFQWIGYAGTFEEIAAAVYVLKNARCLKNATISLYSRGTEN 411
Query: 119 KFKMLKELSSCKRGSATCRLCFK 141
M+KEL S +GS C+L K
Sbjct: 412 GLMMIKELESMSKGSIMCQLLVK 434
>AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22899724-22901985
FORWARD LENGTH=607
Length = 607
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLE-LLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F +L +L+L +A W+ + +L+ P+L+ L + H F++ W+ P
Sbjct: 480 VFSSLKYLELCT--CSARWANLFACILNAAPELRSLKLKSK--HKFNYND-PMTLWEEPA 534
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKELS 127
V +CL HL+ Y GT+ E A Y + N LK T ST +N +MLK+L
Sbjct: 535 VVAKCLSEHLEIFEWRQYEGTEQERNVAGYILANATCLKMATFSTR-CRNRNHRMLKKLK 593
Query: 128 SCKRGSATCRLCFK 141
S R S CRL F
Sbjct: 594 SMDRVSKACRLVFD 607
>AT5G38565.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:15444571-15446009 REVERSE LENGTH=349
Length = 349
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 32 ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYRGTKPE 91
+LL P L++L I + H + W P SVP+CLL L+ L+HY G + +
Sbjct: 235 QLLKDSPNLRVLNIFKVQGHVTLSTGVDC--WNQPISVPECLLESLQIFNLSHYFGKQQD 292
Query: 92 FEFARYSMHNGRFLKSMTISTGIAKNPK--FKMLKELSSCKRGSATCRLCFK 141
+F Y + N LK+ TI +A P+ LKEL+ R S+TC+L +
Sbjct: 293 LDFVVYILKNACHLKTATI---LADEPEHLVPNLKELTLSPRASSTCQLSIR 341
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVL-ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F++L HL+L +++ S +L +LL P LQ+L I F ++ W P
Sbjct: 250 IFNHLEHLKLCMCPFDS--SNLLGQLLKGSPNLQVLDI-------FEMKRNDIVCWNQPS 300
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTG--IAKNPKFKMLKE 125
SV +CLL LK + Y G + + A Y + N LK+ T T I + KM+KE
Sbjct: 301 SVLECLLSSLKILNWSAYFGRPQDRDIAVYILKNACHLKTATFLTDKRINDVRRLKMIKE 360
Query: 126 LSSCKRGSATCRLCF 140
L R S+TC+L F
Sbjct: 361 LRLSPRASSTCQLVF 375
>AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr5:22902736-22904404 FORWARD LENGTH=439
Length = 439
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 10 FHNLIHLQLVYQRYNAHWSQVLE-LLHHCPKLQLLAIN---QPDIHSFHFEQIQKGEWQL 65
F NL+HL+L +A W +L +L+ P L+ L + + D++ K W+
Sbjct: 314 FSNLVHLKLCT--CSAGWQNLLACMLNDAPNLRSLTLKLRQKSDVNP-------KKVWEK 364
Query: 66 PPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKE 125
P VP+CL L+ Y GT+ E + Y + N FL+ T ST +N E
Sbjct: 365 PTVVPECLSTRLEILKWRDYEGTEHEKDMVGYILANATFLQRATFSTK-DRNQCDSRFSE 423
Query: 126 LSSCKRGSATCRLCFK 141
L S +R S C F
Sbjct: 424 LQSMERVSEICEFVFD 439
>AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=417
Length = 417
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 58 IQKG----EWQLPPSVPQCLLLHLKRCYLNHYRGTK-PEFEFARYSMHNGRFLKSMTIST 112
I+KG W P VP+CLL HL++ Y + E E A Y + N R LK T ST
Sbjct: 323 IEKGLDGQNWNPPKCVPECLLFHLEKFLWTGYEWQRGDEKEVATYILENARLLKKATFST 382
Query: 113 GIAK----NPKFKMLKELSSCKRGSATCRLCF 140
+ +ML EL+S R S +C L F
Sbjct: 383 KRIDLENLEKRREMLNELASVARASDSCHLVF 414
>AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19112873-19114497
REVERSE LENGTH=455
Length = 455
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQK----GEWQ 64
M+H L++L++ + W+ + +L PKLQ+L + + + E +K G+W
Sbjct: 314 MYHQLVYLEMHTHKVE-WWNLLTHMLDSSPKLQVLKLIDRETRHENLEFDKKYKDQGKWN 372
Query: 65 LPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKF---- 120
P VP+CL + R N G + E E A Y + N R LK T ST + +
Sbjct: 373 QPKYVPECLETFMWR---NCNWGREEEKEVATYILRNARQLKKATFSTDPIEAKRLCKLA 429
Query: 121 ---KMLKELSSCKRGSATCRLCFK 141
KM +EL S +C L F+
Sbjct: 430 KRRKMREELDGVVMTSNSCHLVFE 453
>AT5G56430.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:22853323-22854575 REVERSE LENGTH=360
Length = 360
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 33 LLHHCPKLQLLAINQPDIHSFHFEQIQ--KGEWQLPPSVPQCLLLHLKRCYLNHYRGTKP 90
+L PKL+ L + Q ++ + + +W+ P SVP+CLL+ L+ Y+GT+
Sbjct: 245 ILRRSPKLRSLKLYQSRERNWSCRNSKHVRTKWEQPNSVPECLLVSLETVKWILYKGTQE 304
Query: 91 EFEFARYSMHNGRFLKSMTI--STGIAKNPKFKMLKELSSCKR-GSATCRLCF 140
E + +Y + NG F+K+M+I S+ + + + E R S+ C+L F
Sbjct: 305 EKDVVKYLLKNGNFIKTMSIRFSSVVTLEERIHIPMEFEFMGRINSSRCQLSF 357
>AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22838836-22840353
REVERSE LENGTH=439
Length = 439
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 10 FHNLIHLQLVYQRYNAHWSQV-LELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
FH L L++ + + W + + LL P LQ + INQ H + +W P S
Sbjct: 311 FHKLKRLEVCTCK--SEWLDLFIHLLEDSPSLQDIKINQ-----CHPVTNPRPQWNQPGS 363
Query: 69 VPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTIS---TGIAKNPKFKMLKE 125
VP+CL L+ Y GT E E + Y K + + +G N K +ML+E
Sbjct: 364 VPRCLSSSLETLEWVEYGGTHEEKELSTYLFKTAVCFKKASFTAKWSGGDANKKLQMLQE 423
Query: 126 LSSCKRGSATCRLCF 140
L+ R S TC L F
Sbjct: 424 LALSPRVSPTCELVF 438
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 5 NSFPMFHNLIHLQLVYQRYNAHWSQVL-ELLHHCPKLQLLAINQPDIHSFHFEQIQKGEW 63
+ P F NL L+ Y + ++L +L CP L+ L + + F+ ++ + E
Sbjct: 337 DPLPQFCNLSRLKAEISLY---FLEILPTILESCPNLKSLVM----VLEFYLQE--EDEP 387
Query: 64 QLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPK-FKM 122
+ SVP+CL+ L+ + + G + E ARY + N L+ + + + + F +
Sbjct: 388 IIFSSVPRCLVSSLESVEIKKFNGRPAKMEVARYFLENSGVLQKLVLHLRCSTHEDGFYI 447
Query: 123 LKELSSCKRGSATCRL 138
LK+L + RGS+TCR+
Sbjct: 448 LKDLLALPRGSSTCRI 463
>AT1G51055.1 | Symbols: | FBD-like domain family protein |
chr1:18925286-18926315 REVERSE LENGTH=161
Length = 161
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 27 WSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYR 86
W+ + +L PKL++L + H + + + W+ P VP CL +L+ Y
Sbjct: 50 WNLLTCILDDAPKLRVLKLKLYRKHCVEYNESMEP-WKQPDYVPICLSSYLEIFEWRQYN 108
Query: 87 GTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKELSSCKRGSATCRLCF 140
G + E E A+Y + N LK A+ K +LKEL RGS C+L F
Sbjct: 109 GEEQEREVAKYILENASRLKKAIFYLESAE--KHGILKELECMARGSKKCQLVF 160
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKL-QLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F++L L L + +Y+++ ++ L + P L +L+ +++ D H E + W P
Sbjct: 283 IFNHLEELTL-WNKYSSN--LLVWFLKNSPNLRELMLVSETDDH----ENLGMLSWNQPS 335
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKELS 127
VP+C+L L++ Y G + + A Y + N L++ TI + K +M+ EL
Sbjct: 336 IVPECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITELR 395
Query: 128 SCKRGSATCRLCF 140
+ S+TC L F
Sbjct: 396 LSSQASSTCELNF 408
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 9 MFHNLIHLQLVYQRYNAHWSQVLELLHHCPKL-QLLAINQPDIHSFHFEQIQKGEWQLPP 67
+F++L L L + +Y+++ ++ L + P L +L+ +++ D H E + W P
Sbjct: 283 IFNHLEELTL-WNKYSSN--LLVWFLKNSPNLRELMLVSETDDH----ENLGMLSWNQPS 335
Query: 68 SVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKMLKELS 127
VP+C+L L++ Y G + + A Y + N L++ TI + K +M+ EL
Sbjct: 336 IVPECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITELR 395
Query: 128 SCKRGSATCRLCF 140
+ S+TC L F
Sbjct: 396 LSSQASSTCELNF 408
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 27 WSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYR 86
W+ + +L PKLQ+L + +H ++ +W P P+CLL HL+ Y
Sbjct: 325 WNLLSIMLDSSPKLQILKLTDVYLHDNKTNPDER-KWNPPKCAPECLLFHLETFLWIGYE 383
Query: 87 GTK-PEFEFARYSMHNGRFLKSMTIST---GIAKNPKF----KMLKELSSCKRGSATCRL 138
+ E E A Y + N R LK T ST G K F +ML EL+ S +C L
Sbjct: 384 WQRGDEKEVATYILENARRLKKATFSTKRIGREKLEDFEKRREMLNELAIVLWDSNSCHL 443
Query: 139 CFK 141
F+
Sbjct: 444 VFE 446
>AT3G55670.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566);
BEST Arabidopsis thaliana protein match is:
F-box/RNI-like/FBD-like domains-containing protein
(TAIR:AT3G52680.2); Has 400 Blast hits to 249 proteins
in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 400; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:20658013-20659503 REVERSE
LENGTH=218
Length = 218
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 43 LAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHYR-GTKPEFEFARYSMHN 101
L +N + +FH + + G+W P VP+CLL L+ G + E E A Y + N
Sbjct: 46 LLLNLSPLKNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRLDWGREEEKEIATYILKN 105
Query: 102 GRFLKSMTISTGIAKNPKFKMLKE 125
GR LK T +T ++ LKE
Sbjct: 106 GRRLKKETFTTNPIESEGLNKLKE 129
>AT5G44850.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:18108304-18109593 FORWARD LENGTH=331
Length = 331
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 33 LLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRC-YLNHYRGTKPE 91
LL PKL+ L++ D + W P SVP CL HL+ ++ Y G E
Sbjct: 223 LLGKSPKLKKLSV---DYGPTENPEDLPLSWNEPSSVPGCLSSHLEIFEWVEKYGGRVEE 279
Query: 92 FEFARYSMHNGRFLKSMTISTGIAKN--PKFKMLKELSSCKRGSATCRLCFK 141
F Y + N + LK TIS A N K K++KEL S R S + +L K
Sbjct: 280 LGFVTYILANSKCLKRATISLRSAFNLEQKQKVMKELDSIPRVSKSSQLLLK 331