Miyakogusa Predicted Gene
- Lj0g3v0057069.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0057069.1 Non Chatacterized Hit- tr|I1LZZ7|I1LZZ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44583
PE,68.45,0,Helicase_C,Helicase, C-terminal;
HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding domain;
,CUFF.2501.1
(350 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 363 e-100
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 352 2e-97
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 347 8e-96
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 347 8e-96
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 347 8e-96
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 195 4e-50
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 182 3e-46
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 181 6e-46
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 181 7e-46
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 180 2e-45
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 179 2e-45
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 179 2e-45
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 179 2e-45
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 179 2e-45
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 176 3e-44
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 174 8e-44
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 3e-43
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 159 2e-39
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 154 9e-38
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 152 3e-37
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 152 3e-37
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 148 6e-36
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 148 6e-36
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 147 1e-35
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 136 2e-32
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 136 2e-32
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 131 6e-31
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 127 1e-29
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 126 3e-29
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 122 4e-28
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 118 6e-27
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 116 3e-26
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 112 4e-25
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 110 2e-24
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 110 2e-24
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 109 2e-24
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 109 3e-24
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 105 4e-23
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 105 4e-23
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 105 6e-23
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 105 7e-23
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 104 7e-23
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 103 3e-22
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 102 3e-22
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 102 5e-22
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 102 5e-22
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 102 5e-22
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 102 6e-22
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 102 6e-22
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 100 2e-21
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 100 3e-21
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 98 7e-21
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 98 8e-21
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 96 3e-20
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 96 3e-20
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 95 8e-20
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 95 8e-20
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 94 2e-19
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 93 2e-19
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 92 6e-19
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 90 2e-18
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 89 3e-18
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 89 3e-18
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 89 4e-18
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 88 1e-17
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 86 3e-17
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 84 1e-16
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 79 4e-15
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 79 6e-15
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 75 6e-14
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 72 5e-13
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 72 6e-13
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 69 4e-12
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 67 2e-11
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 67 2e-11
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 66 4e-11
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 65 1e-10
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 59 4e-09
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 57 3e-08
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/235 (75%), Positives = 200/235 (85%), Gaps = 1/235 (0%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
MLDMGFE QIRKIVQQM MPPPGVRQTMLFSATFP +IQ+LA+DFLSNYIFLAVGRVGSS
Sbjct: 310 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSS 369
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
T+LIVQ++E V D+DKR+HL +LL QR N + GKQALTL+FVETKKGAD+LE WL NG
Sbjct: 370 TDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCING 429
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
FPA IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV+N+DLP DI DY
Sbjct: 430 FPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 489
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEGSS 235
VHRIGRTGRAG SGLATAFF+ N N +AK L E++QEA QEVP WL ++A +S
Sbjct: 490 VHRIGRTGRAGNSGLATAFFNDN-NTTMAKPLAELMQEANQEVPDWLTRYASRAS 543
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 352 bits (903), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/235 (72%), Positives = 200/235 (85%), Gaps = 1/235 (0%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
MLDMGFE QIRKIV+QM MPP GVRQT+LFSATFP +IQ+LAADFL+NYIFLAVGRVGSS
Sbjct: 323 MLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSS 382
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
T+LIVQ++E V D+DKR+HL +LL QR N GKQALTL+FVETK+GAD+LE WL NG
Sbjct: 383 TDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCING 442
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
FPA +IHGD+ Q ERE AL++FK G TPILVATDVA+RGLDIPHVAHV+N+DLP DI DY
Sbjct: 443 FPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 502
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEGSS 235
VHRIGRTGRAGKSGLATAFF ++ N +A+ L E++QEA QEVP WL ++A SS
Sbjct: 503 VHRIGRTGRAGKSGLATAFF-NDGNTSLARPLAELMQEANQEVPEWLTRYASRSS 556
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 347 bits (890), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 169/235 (71%), Positives = 198/235 (84%), Gaps = 3/235 (1%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
MLDMGFE QIRKIV+QM MPP GVRQTMLFSATFP+ IQ+LAADF+SNYIFLAVGRVGSS
Sbjct: 315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
T+LI Q++E VQ++DKR+HL +LL QR D KQ+LTL+FVETK+GAD LE WL N
Sbjct: 375 TDLITQRVEFVQESDKRSHLMDLLHAQRETQD--KQSLTLVFVETKRGADTLENWLCMNE 432
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
FPA +IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV+N+DLP DI DY
Sbjct: 433 FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 492
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEGSS 235
VHRIGRTGRAGKSG+ATAFF+ N N +A++L E++QEA QEVP WL ++A +S
Sbjct: 493 VHRIGRTGRAGKSGIATAFFNEN-NAQLARSLAELMQEANQEVPEWLTRYASRAS 546
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 347 bits (890), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 169/235 (71%), Positives = 198/235 (84%), Gaps = 3/235 (1%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
MLDMGFE QIRKIV+QM MPP GVRQTMLFSATFP+ IQ+LAADF+SNYIFLAVGRVGSS
Sbjct: 315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
T+LI Q++E VQ++DKR+HL +LL QR D KQ+LTL+FVETK+GAD LE WL N
Sbjct: 375 TDLITQRVEFVQESDKRSHLMDLLHAQRETQD--KQSLTLVFVETKRGADTLENWLCMNE 432
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
FPA +IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV+N+DLP DI DY
Sbjct: 433 FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 492
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEGSS 235
VHRIGRTGRAGKSG+ATAFF+ N N +A++L E++QEA QEVP WL ++A +S
Sbjct: 493 VHRIGRTGRAGKSGIATAFFNEN-NAQLARSLAELMQEANQEVPEWLTRYASRAS 546
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 347 bits (890), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 169/235 (71%), Positives = 198/235 (84%), Gaps = 3/235 (1%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
MLDMGFE QIRKIV+QM MPP GVRQTMLFSATFP+ IQ+LAADF+SNYIFLAVGRVGSS
Sbjct: 315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
T+LI Q++E VQ++DKR+HL +LL QR D KQ+LTL+FVETK+GAD LE WL N
Sbjct: 375 TDLITQRVEFVQESDKRSHLMDLLHAQRETQD--KQSLTLVFVETKRGADTLENWLCMNE 432
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
FPA +IHGD+ Q ERE ALRSFK G TPILVATDVA+RGLDIPHVAHV+N+DLP DI DY
Sbjct: 433 FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 492
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEGSS 235
VHRIGRTGRAGKSG+ATAFF+ N N +A++L E++QEA QEVP WL ++A +S
Sbjct: 493 VHRIGRTGRAGKSGIATAFFNEN-NAQLARSLAELMQEANQEVPEWLTRYASRAS 546
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 145/228 (63%), Gaps = 12/228 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVG-S 59
MLDMGFE QIRKIV Q+ RQT+L+SAT+P +++ LA FL + +G
Sbjct: 324 MLDMGFEPQIRKIVSQIRPD----RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 379
Query: 60 STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
+ + I Q IE+V +K N L LL + +D K LIFVETK+G D + L +
Sbjct: 380 ANQSINQVIEIVPTPEKYNRLLTLL---KQLMDGSK---ILIFVETKRGCDQVTRQLRMD 433
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G+PA+AIHGDK Q ER+R L FK G +PI+ ATDVA+RGLD+ + V+NYD P + D
Sbjct: 434 GWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLED 493
Query: 180 YVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 227
Y+HRIGRTGRAG G+A FF+ + N A+ LV+ILQEA Q VP L
Sbjct: 494 YIHRIGRTGRAGAKGMAFTFFTHD-NAKFARELVKILQEAGQVVPPTL 540
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 145/233 (62%), Gaps = 14/233 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS- 59
MLDMGFE QIRKIV ++ P RQT++++AT+P +++K+AAD L N + +G V
Sbjct: 319 MLDMGFEPQIRKIVNEV----PTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDEL 374
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ + I Q IE++ +K + L +L Q + +IF TK+ D L L+R
Sbjct: 375 VANKSITQTIEVLAPMEKHSRLEQILRSQEPG------SKIIIFCSTKRMCDQLARNLTR 428
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ + V+NYD P +
Sbjct: 429 T-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVE 487
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAG +GLA FF +++ A L++IL+ A Q+VP + + A
Sbjct: 488 DYVHRIGRTGRAGATGLAYTFF-GDQDAKHASDLIKILEGANQKVPPQVREMA 539
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 145/236 (61%), Gaps = 12/236 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVG-S 59
MLDMGF+ QIRKIV H+ P RQT+ +SAT+P ++++L+ FL N + +G
Sbjct: 258 MLDMGFDPQIRKIVS--HIRPD--RQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLK 313
Query: 60 STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
+ I Q ++++ ++ K N L LL ++ G + L+F++TKKG D + L +
Sbjct: 314 ANRAIRQIVDVISESQKYNKLVKLL----EDIMDGSR--ILVFLDTKKGCDQITRQLRMD 367
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G+PA++IHGDK Q ER+ L F+ G +PI+ ATDVA+RGLD+ V +VINYD P + D
Sbjct: 368 GWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLED 427
Query: 180 YVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEGSS 235
YVHRIGRTGRAG G A FF+ N AK L ILQEA Q+V L ++
Sbjct: 428 YVHRIGRTGRAGAKGTAYTFFTV-ANARFAKELTNILQEAGQKVSPELASMGRSTA 482
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 145/233 (62%), Gaps = 14/233 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS- 59
MLDMGFE QIRKIV ++ P RQT++++AT+P +++K+AAD L N + +G V
Sbjct: 387 MLDMGFEPQIRKIVNEV----PTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDEL 442
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ + I Q IE++ +K + L +L Q + +IF TK+ D L L+R
Sbjct: 443 VANKSITQTIEVLAPMEKHSRLEQILRSQEPG------SKIIIFCSTKRMCDQLARNLTR 496
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ + V+NYD P +
Sbjct: 497 T-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVE 555
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAG +GLA FF +++ A L++IL+ A Q+VP + + A
Sbjct: 556 DYVHRIGRTGRAGATGLAYTFF-GDQDAKHASDLIKILEGANQKVPPQVREMA 607
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 137/230 (59%), Gaps = 12/230 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
++D+GFE IR++ RQT+LFSAT PT IQ A L + + VGR G++
Sbjct: 314 LVDLGFEDDIREVFDHFK----SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAA 369
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
++Q++E V+ K +L L C Q+ + LIF E K D + +L G
Sbjct: 370 NLDVIQEVEYVKQEAKIVYL--LECLQKTS------PPVLIFCENKADVDDIHEYLLLKG 421
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
A+AIHG K Q +RE A+ SFK G +LVATDVAS+GLD P + HVINYD+P +I +Y
Sbjct: 422 VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 481
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQF 230
VHRIGRTGR GK+G+AT F + N++ L +LQEAKQ +P L +
Sbjct: 482 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 531
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 143/233 (61%), Gaps = 14/233 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS- 59
MLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N + +G V
Sbjct: 316 MLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ + I Q IE+V +K+ L +L Q + +IF TK+ D L L+R
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTKRMCDQLTRNLTR 425
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ + V+NYD P +
Sbjct: 426 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 484
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP + + A
Sbjct: 485 DYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 143/233 (61%), Gaps = 14/233 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS- 59
MLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N + +G V
Sbjct: 316 MLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ + I Q IE+V +K+ L +L Q + +IF TK+ D L L+R
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTKRMCDQLTRNLTR 425
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ + V+NYD P +
Sbjct: 426 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 484
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP + + A
Sbjct: 485 DYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 143/233 (61%), Gaps = 14/233 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS- 59
MLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N + +G V
Sbjct: 316 MLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ + I Q IE+V +K+ L +L Q + +IF TK+ D L L+R
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTKRMCDQLTRNLTR 425
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ + V+NYD P +
Sbjct: 426 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 484
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP + + A
Sbjct: 485 DYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 143/233 (61%), Gaps = 14/233 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS- 59
MLDMGFE QIRKIV+++ P RQT++++AT+P ++K+AAD L N + +G V
Sbjct: 316 MLDMGFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 371
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ + I Q IE+V +K+ L +L Q + +IF TK+ D L L+R
Sbjct: 372 VANKSITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTKRMCDQLTRNLTR 425
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
F A AIHGDK Q ER+ L F+ G TP+LVATDVA+RGLD+ + V+NYD P +
Sbjct: 426 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 484
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAG +G A FF +++ A L++IL+ A Q VP + + A
Sbjct: 485 DYVHRIGRTGRAGATGQAFTFF-GDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 146/233 (62%), Gaps = 14/233 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVG-- 58
MLDMGFE QIRKIV ++ P RQT++++AT+P +++K+A+D L N + + +GRV
Sbjct: 593 MLDMGFEPQIRKIVNEI----PPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDEL 648
Query: 59 SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
++ + I Q +E+V +K L +L Q + + +IF TK+ D L + R
Sbjct: 649 AANKAITQYVEVVPQMEKERRLEQILRSQE------RGSKVIIFCSTKRLCDHLARSVGR 702
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
+ F A+ IHGDK Q ER+ L F+ G + +L+ATDVA+RGLDI + VINYD P +
Sbjct: 703 H-FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVE 761
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAG +G+A FF+ ++ A L+++L+ A Q+VP + A
Sbjct: 762 DYVHRIGRTGRAGATGVAFTFFTE-QDWKYAPDLIKVLEGANQQVPPQVRDIA 813
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 145/233 (62%), Gaps = 11/233 (4%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS-NYIFLAVGRVG- 58
MLDMGFE+ +R I+ + VRQ ++FSAT+P D+ KLA +F+ N I + +G V
Sbjct: 277 MLDMGFEEPVRFILSNTNK----VRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDL 332
Query: 59 SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
++ ++Q IE++ + + L LL + + ++ L+F K A+ LE +L +
Sbjct: 333 AANHDVMQIIEVLDERARDQRLIALLEKYHKS----QKNRVLVFALYKVEAERLERFLQQ 388
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
G+ A++IHG+K Q ER R+L FK G P+LVATDVA+RGLDIP V VINY P
Sbjct: 389 RGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTE 448
Query: 179 DYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
DYVHRIGRTGRAGK G+A FF+ N +A LV +L+EA Q VPA L +F
Sbjct: 449 DYVHRIGRTGRAGKKGVAHTFFTP-LNKGLAGELVNVLREAGQVVPADLLKFG 500
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 133/230 (57%), Gaps = 12/230 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
++D+GFE IR + RQT+LFSAT P IQ A L + + VGR G++
Sbjct: 265 LVDLGFEDDIRHVFDHFK----SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAA 320
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
++Q++E V+ K +L L C Q+ LIF E K D + +L G
Sbjct: 321 NLDVIQEVEYVKQEAKIVYL--LECLQKTT------PPVLIFCENKADVDDIHEYLLLKG 372
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
A+AIHG K Q +R+ A+ FK G +LVATDVAS+GLD P + HVINYD+P +I +Y
Sbjct: 373 VEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENY 432
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQF 230
VHRIGRTGR GK+G+AT F + N++ L +LQEAKQ +P L +
Sbjct: 433 VHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAEL 482
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 139/242 (57%), Gaps = 21/242 (8%)
Query: 1 MLDMGFEQQIRKIVQQM---HMPPPGV----------RQTMLFSATFPTDIQKLAADFLS 47
M+DMGFE Q+ ++ M ++ P R T +FSAT P +++LA +L
Sbjct: 475 MIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLR 534
Query: 48 NYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKK 107
N + + +G G +T+LI Q + ++++++K L LL D + ++FV TKK
Sbjct: 535 NPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL-------DELGEKTAIVFVNTKK 587
Query: 108 GADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAH 167
D++ L + G+ +HG K Q +RE +L F+ +LVATDV RG+DIP VAH
Sbjct: 588 NCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAH 647
Query: 168 VINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 227
VINYD+P+ I Y HRIGRTGRAGKSG+AT+F + + + + L ++L ++ VP L
Sbjct: 648 VINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLH-DTEVFYDLKQMLVQSNSAVPPEL 706
Query: 228 GQ 229
+
Sbjct: 707 AR 708
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 127/232 (54%), Gaps = 11/232 (4%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
M D+GFE Q+R IV Q+ RQT+LFSAT P ++KLA + LS+ I + VG VG +
Sbjct: 387 MFDLGFEPQVRSIVGQIRPD----RQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMA 442
Query: 61 TELIVQKIELV-QDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
E I Q + ++ D +K L LL + +D G L+F K D +E L+ N
Sbjct: 443 NEDITQVVNVIPSDAEK---LPWLLEKLPGMIDEGD---VLVFASKKATVDEIEAQLTLN 496
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
F A+HGDK Q R L+ FK G +L+ATDVA+RGLDI + V+NYD+ +D+
Sbjct: 497 SFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDM 556
Query: 180 YVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFA 231
+VHRIGRTGRAG + + A LV L A Q VP L A
Sbjct: 557 HVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLA 608
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 134/233 (57%), Gaps = 11/233 (4%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
M DMGFE QI +I+Q + RQT+LFSATFP ++ LA L+ + + VG
Sbjct: 353 MFDMGFEPQITRIIQNIRPE----RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 408
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
+ I Q +E+ ++D+ L LL + ++ L+FV++++ DAL + ++
Sbjct: 409 NKDITQLVEVRPESDRFLRLLELLG------EWSEKGKILVFVQSQEKCDALYRDMIKSS 462
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
+P +++HG K Q +RE + FK +L+AT VA+RGLD+ + V+N+D P DY
Sbjct: 463 YPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDY 522
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEG 233
VHR+GRTGRAG+ G A F S + + A LV+ L+ ++Q VP L A+G
Sbjct: 523 VHRVGRTGRAGRKGCAVTFISED-DAKYAPDLVKALELSEQPVPDDLKALADG 574
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 134/233 (57%), Gaps = 11/233 (4%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
M DMGFE QI +I+Q + RQT+LFSATFP ++ LA L+ + + VG
Sbjct: 691 MFDMGFEPQITRIIQNIRPE----RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 746
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
+ I Q +E+ ++D+ L LL + ++ L+FV++++ DAL + ++
Sbjct: 747 NKDITQLVEVRPESDRFLRLLELLG------EWSEKGKILVFVQSQEKCDALYRDMIKSS 800
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
+P +++HG K Q +RE + FK +L+AT VA+RGLD+ + V+N+D P DY
Sbjct: 801 YPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDY 860
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEG 233
VHR+GRTGRAG+ G A F S + + A LV+ L+ ++Q VP L A+G
Sbjct: 861 VHRVGRTGRAGRKGCAVTFISED-DAKYAPDLVKALELSEQPVPDDLKALADG 912
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 17/209 (8%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML +GFE+ + I++ + P RQ+MLFSAT PT ++KLA +L N L + VG
Sbjct: 264 MLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKLARKYLDNP--LNIDLVGDQ 317
Query: 61 TELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWL 116
E + + I+L T KR L++L+ + K T++F +TK+ AD + + L
Sbjct: 318 DEKLAEGIKLYAIATTSTSKRTILSDLITV------YAKGGKTIVFTQTKRDADEVSLAL 371
Query: 117 SRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRD 176
S N A+HGD Q +RER L +F++G +LVATDVASRGLDIP+V VI+Y+LP D
Sbjct: 372 S-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPND 430
Query: 177 IADYVHRIGRTGRAGKSGLATAFFSSNKN 205
+VHR GRTGRAGK G A +S++
Sbjct: 431 PETFVHRSGRTGRAGKEGSAILMHTSSQK 459
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 17/209 (8%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML +GFE+ + I++ + P RQ+MLFSAT PT ++KLA +L N L + VG
Sbjct: 264 MLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKLARKYLDNP--LNIDLVGDQ 317
Query: 61 TELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWL 116
E + + I+L T KR L++L+ + K T++F +TK+ AD + + L
Sbjct: 318 DEKLAEGIKLYAIATTSTSKRTILSDLITV------YAKGGKTIVFTQTKRDADEVSLAL 371
Query: 117 SRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRD 176
S N A+HGD Q +RER L +F++G +LVATDVASRGLDIP+V VI+Y+LP D
Sbjct: 372 S-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPND 430
Query: 177 IADYVHRIGRTGRAGKSGLATAFFSSNKN 205
+VHR GRTGRAGK G A +S++
Sbjct: 431 PETFVHRSGRTGRAGKEGSAILMHTSSQK 459
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 17/209 (8%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML +GFE+ + I++ + P RQ+MLFSAT PT ++KLA +L N L + VG
Sbjct: 171 MLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKLARKYLDNP--LNIDLVGDQ 224
Query: 61 TELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWL 116
E + + I+L T KR L++L+ + K T++F +TK+ AD + + L
Sbjct: 225 DEKLAEGIKLYAIATTSTSKRTILSDLITV------YAKGGKTIVFTQTKRDADEVSLAL 278
Query: 117 SRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRD 176
S N A+HGD Q +RER L +F++G +LVATDVASRGLDIP+V VI+Y+LP D
Sbjct: 279 S-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPND 337
Query: 177 IADYVHRIGRTGRAGKSGLATAFFSSNKN 205
+VHR GRTGRAGK G A +S++
Sbjct: 338 PETFVHRSGRTGRAGKEGSAILMHTSSQK 366
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 15/211 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML +GF + + I++++ P RQ+M+FSAT P+ I+ L +L+N L V VG S
Sbjct: 262 MLQVGFAEDVEIILEKL----PEKRQSMMFSATMPSWIRSLTKKYLNNP--LTVDLVGDS 315
Query: 61 TELIVQKI---ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLS 117
+ + I ++ D+ R + L +H K ++F +TK+ AD L L+
Sbjct: 316 DQKLADGITTYSIIADSYGRASIIGPLV-----TEHAKGGKCIVFTQTKRDADRLSYALA 370
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
R+ F A+HGD Q +RER L F+ G ILVATDVA+RGLD+P+V +I+Y+LP +
Sbjct: 371 RS-FKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNT 429
Query: 178 ADYVHRIGRTGRAGKSGLATAFFSSNKNPPI 208
+VHR GRTGRAGK G A +S +++ +
Sbjct: 430 ETFVHRTGRTGRAGKKGSAILIYSQDQSRAV 460
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 15/199 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML +GF + + I+Q++ P RQ+M+FSAT P+ I+ L +L+N L + VG S
Sbjct: 274 MLQVGFAEDVEIILQKL----PAKRQSMMFSATMPSWIRSLTKKYLNNP--LTIDLVGDS 327
Query: 61 TELIVQKI---ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLS 117
+ + I + D+ R + L ++ HGK ++F +TK+ AD L L+
Sbjct: 328 DQKLADGITMYSIAADSYGRASIIGPLVKE-----HGKGGKCIVFTQTKRDADRLAFGLA 382
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
++ + A+HGD Q +RER L F+ G ILVATDVA+RGLD+P+V VI+Y+LP +
Sbjct: 383 KS-YKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNT 441
Query: 178 ADYVHRIGRTGRAGKSGLA 196
+VHR GRTGRAGK G A
Sbjct: 442 ETFVHRTGRTGRAGKKGSA 460
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 115/202 (56%), Gaps = 10/202 (4%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
+LD+GF+ ++R I Q + P RQT+LFSAT +++Q L + SN + G
Sbjct: 215 VLDVGFQDELRTIFQCL----PKSRQTLLFSATMTSNLQALL-EHSSNKAYFYEAYEGLK 269
Query: 61 TELIVQKIELVQDTD-KRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
T + + + +D D K +L ++L + D G ++ +IFV T + L + L
Sbjct: 270 TVDTLTQQFIFEDKDAKELYLVHILSQME---DKGIRS-AMIFVSTCRTCQRLSLMLDEL 325
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
IA+H Q R AL FK G PIL+ATDVASRGLDIP V VINYD+PRD D
Sbjct: 326 EVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRD 385
Query: 180 YVHRIGRTGRAGKSGLATAFFS 201
YVHR+GRT RAG+ GLA + +
Sbjct: 386 YVHRVGRTARAGRGGLAVSIIT 407
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 100/161 (62%), Gaps = 11/161 (6%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVG-S 59
MLDMGFE QIRKIV Q+ RQT+L+SAT+P +++ LA FL + +G
Sbjct: 324 MLDMGFEPQIRKIVSQIR----PDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 379
Query: 60 STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
+ + I Q IE+V +K N L LL + +D K LIFVETK+G D + L +
Sbjct: 380 ANQSINQVIEIVPTPEKYNRLLTLL---KQLMDGSK---ILIFVETKRGCDQVTRQLRMD 433
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGL 160
G+PA+AIHGDK Q ER+R L FK G +PI+ ATDVA+RGL
Sbjct: 434 GWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 127/245 (51%), Gaps = 28/245 (11%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGV---------------RQTMLFSATFPTDIQKLAADF 45
M+DM FE Q+ +++ M P + R T +FSAT +++LA F
Sbjct: 364 MIDMDFEPQVSEVLDVM--PCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKF 421
Query: 46 LSNYIFLAVGRVGSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVET 105
L N + + +G +T+ I Q++ + +++DK + L L+ D G ++FV T
Sbjct: 422 LRNPVVVTIG---ETTKFITQQVIMTKESDKFSRLKKLI------DDLGDDKTAIVFVNT 472
Query: 106 KKGADALEIWLSRNGFPAIA-IHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPH 164
+ D + L + G + +H K Q +R+ +L FK+ +LV TDV RGLDI
Sbjct: 473 RNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILD 532
Query: 165 VAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVP 224
+A VINYD+P + Y HRIGRTGRAGK+G+AT F + ++ + L + L E VP
Sbjct: 533 LAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTL-EDKDVFYGLKQKLNECNSLVP 591
Query: 225 AWLGQ 229
L +
Sbjct: 592 PELAR 596
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
+L+ FE+ + +I++++ P R+T LFSAT ++KL L N + + S+
Sbjct: 176 LLNEDFEKSLNQILEEI----PLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYST 231
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
+ + Q+ V K +L +L ++ ++IF T G L + L G
Sbjct: 232 VDTLKQQYRFVAAKYKDCYLVYIL-------SEMPESTSMIFTRTCDGTRFLALVLRSLG 284
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
F AI I G Q +R AL FK G ILV TDVASRGLDIP V VINYD+P + DY
Sbjct: 285 FRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDY 344
Query: 181 VHRIGRTGRAGKSGLATAF 199
+HR+GRT RAG+SG+ +
Sbjct: 345 IHRVGRTARAGRSGVGISL 363
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 40/233 (17%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
M DMGFE QI +IVQ + RQT+LFSATFP ++ LA L+ + + VG
Sbjct: 558 MFDMGFEPQITRIVQNIRPD----RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 613
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
+ I Q +E+ ++++ + L LL + GK L+FV ++
Sbjct: 614 NKDITQLVEIRPESERFSRLLELLGEW---YEKGK---VLVFVRSQ-------------- 653
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
E+++ FK +L+AT VA+RGLD+ + V+N+D P DY
Sbjct: 654 ---------------EKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDY 698
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEG 233
VHR+GRTGRAG+ G A F S + + A LV+ L+ ++Q VP + AEG
Sbjct: 699 VHRVGRTGRAGRKGCAVTFISED-DAKYAPDLVKALELSEQPVPDDVKAVAEG 750
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 12/228 (5%)
Query: 3 DMGFEQQIRK---IVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS 59
D FEQ + K V + P +R LFSAT P +++LA + + + + +GR +
Sbjct: 292 DKLFEQSLLKQIDCVVKACSNPSIIRS--LFSATLPDSVEELARSIMHDAVRVIIGRKNT 349
Query: 60 STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
++E + QK+ + + L R + LIFV++K+ A L L
Sbjct: 350 ASETVKQKLVFAGSEEGK------LLALRQSFAESLNPPVLIFVQSKERAKELYDELKCE 403
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
A IH D ERE A+ F+ G +L+ATDV +RG+D + VINYD P +
Sbjct: 404 NIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASA 463
Query: 180 YVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 227
Y+HRIGR+GRAG+SG A F+ + ++ P + + + + EVP+W+
Sbjct: 464 YIHRIGRSGRAGRSGEAITFY-TEQDVPFLRNIANTMMSSGCEVPSWI 510
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 8/203 (3%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
+L GF +I ++V+ P RQTMLFSAT ++++L L+ + L+
Sbjct: 325 LLQTGFATEITELVRLC----PKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARR 380
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
+ +++ ++ T + N A LL + ++ +IF TK+ A L+I G
Sbjct: 381 PPGLTEEVVRIRRTREANQEAVLL----SLCTRTFKSKVIIFSGTKQAAHRLKILFGLAG 436
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
A +HG+ Q +R +L F++ L+ATDVA+RGLDI V VINY PR+I Y
Sbjct: 437 LKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSY 496
Query: 181 VHRIGRTGRAGKSGLATAFFSSN 203
VHR+GRT RAG+ G A F + +
Sbjct: 497 VHRVGRTARAGREGYAVTFVTDS 519
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 10 IRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSST-ELIVQKI 68
+R+ VQ++ P +Q M+FSAT +I+ + F+ + + + V T +VQ
Sbjct: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267
Query: 69 ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGFPAIAIHG 128
+ + +K L +LL +D + +IFV++ A L L FP+I IH
Sbjct: 268 IKLSEMEKNRKLNDLL----DALDFNQ---VVIFVKSVSRAAELNKLLVECNFPSICIHS 320
Query: 129 DKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTG 188
Q ER +SFK G ILVATD+ RG+DI V VINYD+P Y+HR+GR G
Sbjct: 321 GMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
Query: 189 RAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 227
R G GLA F +S + + + E + +E+P +
Sbjct: 381 RFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 419
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 10 IRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSST-ELIVQKI 68
+R+ VQ++ P +Q M+FSAT +I+ + F+ + + + V T +VQ
Sbjct: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267
Query: 69 ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGFPAIAIHG 128
+ + +K L +LL +D + +IFV++ A L L FP+I IH
Sbjct: 268 IKLSEMEKNRKLNDLL----DALDFNQ---VVIFVKSVSRAAELNKLLVECNFPSICIHS 320
Query: 129 DKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTG 188
Q ER +SFK G ILVATD+ RG+DI V VINYD+P Y+HR+GR G
Sbjct: 321 GMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
Query: 189 RAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 227
R G GLA F +S + + + E + +E+P +
Sbjct: 381 RFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 419
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 10 IRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSST-ELIVQKI 68
+R+ VQ++ P +Q M+FSAT +I+ + F+ + + + V T +VQ
Sbjct: 125 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 184
Query: 69 ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGFPAIAIHG 128
+ + +K L +LL +D + +IFV++ A L L FP+I IH
Sbjct: 185 IKLSEMEKNRKLNDLL----DALDFNQ---VVIFVKSVSRAAELNKLLVECNFPSICIHS 237
Query: 129 DKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTG 188
Q ER +SFK G ILVATD+ RG+DI V VINYD+P Y+HR+GR G
Sbjct: 238 GMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 297
Query: 189 RAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 227
R G GLA F +S + + + E + +E+P +
Sbjct: 298 RFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 336
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI + + ++PP Q L SAT P +I ++ + F++ + + V R +
Sbjct: 189 MLSRGFKDQIYDVYR--YLPPD--LQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELT 244
Query: 61 TELIVQKIELVQDTD-KRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
E I Q V+ + K + L +L D +IF TK+ D L + +
Sbjct: 245 LEGIKQFFVAVEKEEWKFDTLCDLY-------DTLTITQAVIFCNTKRKVDYLSEKMRSH 297
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
F ++HGD Q ER+ + F+ G + +L+ TDV +RG+D+ V+ VINYDLP +
Sbjct: 298 NFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 357
Query: 180 YVHRIGRTGRAGKSGLATAFFSSN 203
Y+HRIGR+GR G+ G+A F S+
Sbjct: 358 YIHRIGRSGRFGRKGVAINFVKSD 381
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF Q+ +I Q + P Q +LFSAT +++K+ I +++G
Sbjct: 272 MLQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKP 326
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR-N 119
+ + Q V K+ L ++L Q +H K +++V ++ GAD L ++
Sbjct: 327 NKAVNQLAIWVDAKQKKQKLFDILRSQ----NHFKPP-AVVYVSSRVGADLLANAITVVT 381
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G A++IHG+K ER + SF G P+LV+T V RG+D+ V VI +D+P I +
Sbjct: 382 GVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKE 441
Query: 180 YVHRIGRTGRAGKSGLATAFFSSN 203
Y+H IGR R G+ G A F + +
Sbjct: 442 YIHVIGRASRMGEKGTAIVFVNED 465
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF Q+ +I Q + P Q +LFSAT +++K+ I +++G
Sbjct: 272 MLQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKP 326
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR-N 119
+ + Q V K+ L ++L Q +H K +++V ++ GAD L ++
Sbjct: 327 NKAVNQLAIWVDAKQKKQKLFDILRSQ----NHFKPP-AVVYVSSRVGADLLANAITVVT 381
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G A++IHG+K ER + SF G P+LV+T V RG+D+ V VI +D+P I +
Sbjct: 382 GVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKE 441
Query: 180 YVHRIGRTGRAGKSGLATAFFSSN 203
Y+H IGR R G+ G A F + +
Sbjct: 442 YIHVIGRASRMGEKGTAIVFVNED 465
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 16/206 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML G + QI + + + P Q L SAT P +I ++ F+++ + + V
Sbjct: 176 MLSKGLKDQIYDVYRAL----PHDIQVCLISATLPQEILEMTEKFMTDPVRILV----KP 227
Query: 61 TELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKGADALEIWLS 117
EL ++ I + D DK + LC +G+ + +IF T++ D L +
Sbjct: 228 DELTLEGIKQYYVDVDKEEWKFDTLCDL-----YGRLTINQAIIFCNTRQKVDWLTEKMR 282
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
+ F ++HGDK Q ER+ + F+ + +L+A+DV +RG+D+ V+HVINYD+P +
Sbjct: 283 SSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNP 342
Query: 178 ADYVHRIGRTGRAGKSGLATAFFSSN 203
Y+HRIGR GR G+ G+A F S+
Sbjct: 343 ELYIHRIGRAGRFGREGVAINFVKSS 368
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF Q+ +I Q + P Q +LFSAT +++K+ I +++G
Sbjct: 135 MLQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKP 189
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR-N 119
+ + Q V K+ L ++L Q +H K +++V ++ GAD L ++
Sbjct: 190 NKAVNQLAIWVDAKQKKQKLFDILRSQ----NHFKPP-AVVYVSSRVGADLLANAITVVT 244
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G A++IHG+K ER + SF G P+LV+T V RG+D+ V VI +D+P I +
Sbjct: 245 GVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKE 304
Query: 180 YVHRIGRTGRAGKSGLATAFFSSN 203
Y+H IGR R G+ G A F + +
Sbjct: 305 YIHVIGRASRMGEKGTAIVFVNED 328
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S + + V R
Sbjct: 193 MLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKR---- 244
Query: 61 TELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
EL ++ I + + +K LC + + ++IFV T++ D L +
Sbjct: 245 DELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKMRSR 301
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ VIN+DLP +
Sbjct: 302 DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN 361
Query: 180 YVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEV 223
Y+HRIGR+GR G+ G+A F + + + I E ++EV
Sbjct: 362 YLHRIGRSGRFGRKGVAINFVTRDDERMLCLRTWPICCEGRKEV 405
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI I Q + P Q +FSAT P + ++ F++ + + V R
Sbjct: 195 MLSRGFKDQIYDIFQLL----PSKVQVGVFSATMPPEALEITRKFMNKPVRILVKR---- 246
Query: 61 TELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
EL ++ I + + DK LC + + ++IFV T++ D L +
Sbjct: 247 DELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKMRSR 303
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ VIN+DLP +
Sbjct: 304 DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN 363
Query: 180 YVHRIGRTGRAGKSGLATAFFSSNKNPPIA 209
Y+HRIGR+GR G+ G+A F +S +A
Sbjct: 364 YLHRIGRSGRFGRKGVAINFMTSEDERMMA 393
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 120/242 (49%), Gaps = 21/242 (8%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS-NYIFLAVGRVGS 59
+LDMGF + I +I+ + P RQT LFSAT P +++++ L ++ F+ + GS
Sbjct: 549 LLDMGFRRDIERIIAAV----PKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGS 604
Query: 60 S-TELIVQKIELVQDTDKRNHLANLLCRQRA--NVDHGKQALTLIFVETKKGADALEIWL 116
T V ++ ++ D+ L ++L ++ NVD+ +IF T + L
Sbjct: 605 GETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYK----VIIFCTTAMVTRLVADLL 660
Query: 117 SRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRD 176
S+ IH K Q R R F++ ILV +DV++RG+D P V+ V+ LP D
Sbjct: 661 SQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSD 720
Query: 177 IADYVHRIGRTGRAGKSGLATA--------FFSSNKNPPIAKA-LVEILQEAKQEVPAWL 227
Y+HR+GRTGR GK G F SS K+ PI K+ L I EA + V L
Sbjct: 721 REQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGL 780
Query: 228 GQ 229
Q
Sbjct: 781 SQ 782
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S + + V R
Sbjct: 193 MLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKR---- 244
Query: 61 TELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
EL ++ I + + +K + LC + + ++IFV T++ D L +
Sbjct: 245 DELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKMRSR 301
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ VIN+DLP +
Sbjct: 302 DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN 361
Query: 180 YVHRIGRTGRAGKSGLATAFFS 201
Y+HRIGR+GR G+ G+A F +
Sbjct: 362 YLHRIGRSGRFGRKGVAINFVT 383
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S + + V R +
Sbjct: 188 MLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKRDELT 243
Query: 61 TELIVQKIELVQDTD-KRNHLANLLCRQRANVDHGKQALT--LIFVETKKGADALEIWLS 117
E I Q V+ D K L +L + A+T +IFV T++ D L +
Sbjct: 244 LEGIKQFYVNVEKEDWKLETLCDL---------YETLAITQSVIFVNTRRKVDWLTDKMR 294
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ VIN+DLP
Sbjct: 295 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP 354
Query: 178 ADYVHRIGRTGRAGKSGLATAFFS 201
+Y+HRIGR+GR G+ G+A F +
Sbjct: 355 ENYLHRIGRSGRFGRKGVAINFVT 378
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S + + V R
Sbjct: 193 MLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKR---- 244
Query: 61 TELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKGADALEIWLS 117
EL ++ I + + +K LC + A+T +IFV T++ D L +
Sbjct: 245 DELTLEGIKQFYVNVEKEEWKLETLCDLYETL-----AITQSVIFVNTRRKVDWLTDKMR 299
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ VIN+DLP
Sbjct: 300 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP 359
Query: 178 ADYVHRIGRTGRAGKSGLATAFFSSN 203
+Y+HRIGR+GR G+ G+A F + +
Sbjct: 360 ENYLHRIGRSGRFGRKGVAINFVTRD 385
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S + + V R
Sbjct: 183 MLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKR---- 234
Query: 61 TELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKGADALEIWLS 117
EL ++ I + + +K LC + A+T +IFV T++ D L +
Sbjct: 235 DELTLEGIKQFYVNVEKEEWKLETLCDLYETL-----AITQSVIFVNTRRKVDWLTDKMR 289
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ VIN+DLP
Sbjct: 290 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP 349
Query: 178 ADYVHRIGRTGRAGKSGLATAFFSSN 203
+Y+HRIGR+GR G+ G+A F + +
Sbjct: 350 ENYLHRIGRSGRFGRKGVAINFVTRD 375
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML GF+ QI I Q + PP + Q +FSAT P + ++ F+S + + V R
Sbjct: 188 MLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKR---- 239
Query: 61 TELIVQKI-ELVQDTDKRNHLANLLCRQRANVDHGKQALT--LIFVETKKGADALEIWLS 117
EL ++ I + + +K LC + A+T +IFV T++ D L +
Sbjct: 240 DELTLEGIKQFYVNVEKEEWKLETLCDLYETL-----AITQSVIFVNTRRKVDWLTDKMR 294
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
A HGD Q R+ +R F+ G + +L+ TD+ +RG+D+ V+ VIN+DLP
Sbjct: 295 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP 354
Query: 178 ADYVHRIGRTGRAGKSGLATAFFSSN 203
+Y+HRIGR+GR G+ G+A F + +
Sbjct: 355 ENYLHRIGRSGRFGRKGVAINFVTRD 380
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS-NYIFLAVGRVGS 59
+LDMGF + I +I+ + P RQT LFSAT P +++++ L ++ F+ G+
Sbjct: 487 LLDMGFRKDIERIISAV----PKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGT 542
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQR--ANVDHGKQALTLIFVETKKGADAL-EIW 115
T V+++ ++ D+ L L R+ NVD+ + TK AD L E+
Sbjct: 543 IETHQQVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELN 602
Query: 116 LSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPR 175
L+ IH K Q R R F++ ILV +DV++RG+D P V V+ LP+
Sbjct: 603 LN-----VREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPK 657
Query: 176 DIADYVHRIGRTGRAGKSGLATA--------FFSSNKNPPIAKA 211
D Y+HR+GRTGR GK G F SS K+ PI K+
Sbjct: 658 DREQYIHRLGRTGRKGKEGEGILLLAPWEEYFLSSLKDLPITKS 701
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 35/253 (13%)
Query: 10 IRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVG-------------- 55
+R+ VQ++ P +Q M+FSAT +I+ + F+ + + G
Sbjct: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGY 267
Query: 56 ---------RVGSSTELIVQKIELVQDTDKRNHLANLL--------CRQRANVDHGKQAL 98
R+G + + +E+ D + + L L+ + ++ AL
Sbjct: 268 CVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDAL 327
Query: 99 ----TLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATD 154
+IFV++ A L L FP+I IH Q ER +SFK G ILVATD
Sbjct: 328 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATD 387
Query: 155 VASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVE 214
+ RG+DI V VINYD+P Y+HR+GR GR G GLA F +S + + + E
Sbjct: 388 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 447
Query: 215 ILQEAKQEVPAWL 227
+ +E+P +
Sbjct: 448 RFEVDIKELPEQI 460
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 120/232 (51%), Gaps = 31/232 (13%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAV---GRV 57
+L+MGF++Q+ I+ ++ P R+T LFSAT +++LA L N + + V +
Sbjct: 179 LLEMGFQRQVNYIISRL----PKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKS 234
Query: 58 GSSTELIVQK------IELVQ-DTDKRN-HLANLLCRQRANVDHGKQALTLIFVETKKGA 109
SS +L K +E ++ + DK++ L +LL + N D ++F T
Sbjct: 235 ESSQQLTNSKTPSGLHLEYMECEADKKSSQLVDLLIK---NSDKK----LIVFFMTCASV 287
Query: 110 DALEIWLSR----NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHV 165
D + LS+ I IHGD Q R++AL SF + + L+ TDVA+RGLDIP +
Sbjct: 288 DYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGI 347
Query: 166 AHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQ 217
+V+ YD P+D + HR GRT R G+ G A F P +A VE ++
Sbjct: 348 DYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLL-----PKEEAYVEFMR 394
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 115/268 (42%), Gaps = 53/268 (19%)
Query: 10 IRKIVQQMHMPPPGVRQTMLFSATFPTDI----QKLAADFLSN----------------- 48
+R+ VQ++ P +Q M+FSAT +I +K DFL N
Sbjct: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEW 267
Query: 49 -------------YIFLAVGRVGSSTELIVQK-------IELVQDTDKRNHLANLL---- 84
+F A+ S T + +K +E+ D + + L L+
Sbjct: 268 RLCSFGFIVLVWVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYI 327
Query: 85 ----CRQRANVDHGKQAL----TLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERE 136
+ ++ AL +IFV++ A L L FP+I IH Q ER
Sbjct: 328 KLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERL 387
Query: 137 RALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLA 196
+SFK G ILVATD+ RG+DI V VINYD+P Y+HR+GR GR G GLA
Sbjct: 388 TRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA 447
Query: 197 TAFFSSNKNPPIAKALVEILQEAKQEVP 224
F +S + + + E + +E+P
Sbjct: 448 ITFVASASDSEVLNQVQERFEVDIKELP 475
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 3 DMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN-YIFLAVGRVGSST 61
D Q+ + V+ + P RQ ++FSATFP ++ FL+N Y+ + + +
Sbjct: 283 DKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDEL--TL 340
Query: 62 ELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGF 121
+ I Q V++ K + L L + + N ++IF + + L ++ G+
Sbjct: 341 KGITQFYAFVEERQKIHCLNTLFSKLQIN-------QSIIFCNSVNRVELLAKKITELGY 393
Query: 122 PAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYV 181
IH +Q R R F+ G LV TD+ +RG+DI V VIN+D P++ Y+
Sbjct: 394 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYL 453
Query: 182 HRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQ 229
HR+GR+GR G GLA + + + E+ E KQ +P + Q
Sbjct: 454 HRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ-IPPHIDQ 500
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 3 DMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN-YIFLAVGRVGSST 61
D Q+ + V+ + P RQ ++FSATFP ++ FL+N Y+ + + +
Sbjct: 283 DKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDEL--TL 340
Query: 62 ELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGF 121
+ I Q V++ K + L L + + N ++IF + + L ++ G+
Sbjct: 341 KGITQFYAFVEERQKIHCLNTLFSKLQIN-------QSIIFCNSVNRVELLAKKITELGY 393
Query: 122 PAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYV 181
IH +Q R R F+ G LV TD+ +RG+DI V VIN+D P++ Y+
Sbjct: 394 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYL 453
Query: 182 HRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQ 229
HR+GR+GR G GLA + + + E+ E KQ +P + Q
Sbjct: 454 HRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ-IPPHIDQ 500
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS-NYIFLAVGRVGS 59
+LDMGF ++I +I+ + P RQT LFSAT +++++ L ++ F+ + G+
Sbjct: 247 LLDMGFRREIERIIAAV----PKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGA 302
Query: 60 -STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
T V ++ ++ D+ L L ++ + G + + IF T + L +
Sbjct: 303 GETHQKVSQMYMIASLDRHFSLLYGLLKKHITDNVGYKVI--IFCTTAMVTRLVADLLGK 360
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
IH K Q R R F++ + ILV +DV++RG+D P V+ V+ LP D
Sbjct: 361 LSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDRE 420
Query: 179 DYVHRIGRTGRAGKSGLATA--------FFSSNKNPPIAK-ALVEILQEAKQEVPAWLGQ 229
Y+HR+GRTGR GK G F SS K+ PI K +L I EA ++V L Q
Sbjct: 421 QYIHRLGRTGRKGKEGEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQ 480
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN-YIFLAVGRVGS 59
+L + F+ I +++Q + P RQ ++FSATFP ++ +L YI + ++
Sbjct: 308 LLSVEFQPSIEELIQFL----PESRQILMFSATFPVTVKSFKDRYLKKPYIINLMDQL-- 361
Query: 60 STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
+ + Q V++ K + L L + + N ++IF + + L ++
Sbjct: 362 TLMGVTQYYAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITEL 414
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G+ IH VQ R R F+ G LV TD+ +RG+DI V VIN+D PR
Sbjct: 415 GYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSES 474
Query: 180 YVHRIGRTGRAGKSGLA 196
Y+HR+GR+GR G GLA
Sbjct: 475 YLHRVGRSGRFGHLGLA 491
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
ML MGF + + I+ ++ QT+LFSAT P+ ++ ++ FL + VG+
Sbjct: 260 MLRMGFVEDVELILGKVEDSTK--VQTLLFSATLPSWVKNISNRFLKRD-QKTIDLVGND 316
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
+ + + +A L+ + G Q T+IF ETK L L +
Sbjct: 317 KMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQ--TIIFAETKVQVSELSGLLDGSR 374
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
A+HG+ Q +RE L F+ G LVAT+VA+RGLDI V +I + PR++ Y
Sbjct: 375 ----ALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAY 430
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKN 205
+HR GRTGRAG +G+A + S K+
Sbjct: 431 IHRSGRTGRAGNTGVAVTLYDSRKS 455
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVG---RV 57
+LDMGF++Q+ I+ ++ P R+T LFSAT + LA L N + + G +
Sbjct: 179 LLDMGFQKQVNYIISRL----PKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKS 234
Query: 58 GSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLS 117
+S+ L + ++ D K + L +LL K ++F T D + LS
Sbjct: 235 KTSSGLYCEYLKCEAD-QKSSQLVHLLI-------ENKNKKLVVFFMTCACVDYWGLVLS 286
Query: 118 R----NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDL 173
+ + HG Q R+ AL SF + +L+ TDVA+RGLDIP + +V+ YD
Sbjct: 287 KIPTLKSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDP 346
Query: 174 PRDIADYVHRIGRTGRAGKSGLATAFF 200
P+D ++HR+GRT R + G A F
Sbjct: 347 PQDPDVFIHRVGRTARMERQGRAIVFL 373
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 31/206 (15%)
Query: 5 GFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSSTELI 64
GF KI++ + P Q +LFSATF ++ DF++ V +L
Sbjct: 255 GFRDDSLKIMKDIGRVNPNF-QVLLFSATFNETVK----DFVART-------VKDPNQLF 302
Query: 65 VQKIELVQDTDKRNHLANLLCRQRAN---------VDHGKQALTLIFVETKKGADALEIW 115
V++ +L D+ K+ ++C + N ++ G T+IFV+TK A +
Sbjct: 303 VKREDLALDSVKQ---YKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKA 359
Query: 116 LSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPR 175
L+ G+ ++HG+ + +R++ ++ FK T +L+ATDV +RG D V V+NY+LP
Sbjct: 360 LAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPT 419
Query: 176 -------DIADYVHRIGRTGRAGKSG 194
D Y+HR+GR GR G+ G
Sbjct: 420 KYETGEPDYEVYLHRVGRAGRFGRKG 445
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
+ MGF +Q+ +I+ Q+ RQT+LFSAT P+ + + A L + +
Sbjct: 185 LFGMGFAEQLHQILTQLSEN----RQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKI 240
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
+ + V+ +K + L L+ R ++ +Q TLIFV TK + +
Sbjct: 241 SPDLKLSFLTVRPEEKYSALLYLV---REHISSDQQ--TLIFVSTKHHVEFVNSLFKLEN 295
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY 180
+GD Q R+ + F+ T +L+ TD+A+RG+DIP + +VIN+D P +
Sbjct: 296 IEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIF 355
Query: 181 VHRIGRTGRAGKSGLATAFFSSNKNP 206
VHR+GR RAG++G A +F + P
Sbjct: 356 VHRVGRAARAGRTGCAYSFVTPEDMP 381
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN-YIFLAVGRVGS 59
+L F+ + +++Q + P RQ ++FSATFP ++ L Y+ + ++
Sbjct: 278 LLSAEFQPSLEELIQFL----PQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQL-- 331
Query: 60 STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
+ + Q V++ K + L L + + N ++IF + + L ++
Sbjct: 332 TLMGVTQYYAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITEL 384
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G+ IH VQ R R F+ G LV TD+ +RG+DI V VIN+D PR
Sbjct: 385 GYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSES 444
Query: 180 YVHRIGRTGRAGKSGLA 196
Y+HR+GR+GR G GLA
Sbjct: 445 YLHRVGRSGRFGHLGLA 461
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN-YIFLAVGRVGS 59
+L F+ + +++Q + P RQ ++FSATFP ++ L Y+ + ++
Sbjct: 278 LLSAEFQPSLEELIQFL----PQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQL-- 331
Query: 60 STELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRN 119
+ + Q V++ K + L L + + N ++IF + + L ++
Sbjct: 332 TLMGVTQYYAFVEERQKVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITEL 384
Query: 120 GFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIAD 179
G+ IH VQ R R F+ G LV TD+ +RG+DI V VIN+D PR
Sbjct: 385 GYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSES 444
Query: 180 YVHRIGRTGRAGKSGLA 196
Y+HR+GR+GR G GLA
Sbjct: 445 YLHRVGRSGRFGHLGLA 461
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS---NYIFLAVGRV 57
+LD+GF + + KI+ + P RQ++LFSAT P ++++++ L +YI +G
Sbjct: 496 LLDLGFRRDVEKIIDCL----PRQRQSLLFSATIPKEVRRVSQLVLKRDHSYID-TIGLG 550
Query: 58 GSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLS 117
T V++ +V + HL L ++ ++++ ++F T + L
Sbjct: 551 CVETHDKVRQSCIVAPHESHFHLVPHLLKE--HINNTPDYKIIVFCSTGMVTSLMYTLLR 608
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
IH K Q+ R R FK ILV +DV++RG++ P V VI +P D
Sbjct: 609 EMKLNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDR 668
Query: 178 ADYVHRIGRTGRAGKSG 194
Y+HR+GRTGR GK G
Sbjct: 669 EQYIHRLGRTGREGKGG 685
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 20/235 (8%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAV--GRVG 58
+L+ FE+ ++KI+ + P RQT LFSAT ++ LA L++ +++ V GR
Sbjct: 313 ILEQNFEEDLKKILNLL----PKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKE 368
Query: 59 SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ E + Q +V + L L R GK+ + + F K E++
Sbjct: 369 VTNEGLEQGYCVVPSAMRLLFLLTFLKRF-----QGKKKIMVFFSTCKSTKFHAELF-RY 422
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
F + I G Q +R F + T IL+ T+VA+RGLD PHV ++ YD P +
Sbjct: 423 IKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPT 482
Query: 179 DYVHRIGRTGRA-GKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAE 232
DY+HR+GRT R G G A + P ++ L+ AK +P +F E
Sbjct: 483 DYIHRVGRTARGEGAKGKALLVLT-----PQELKFIQYLKAAK--IPVEEHEFEE 530
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLS---NYIFLAVGRV 57
+LD+GF++ + KI+ + P RQ++LFSAT P ++++++ L +YI +G
Sbjct: 543 LLDLGFKRDVEKIIDCL----PRQRQSLLFSATIPKEVRRVSQLVLKRDHSYID-TIGLG 597
Query: 58 GSSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLS 117
T V++ +V + HL L ++ ++++ ++F T + L
Sbjct: 598 CVETHDKVKQSCIVAPHESHFHLVPHLLKE--HINNMPDYKIIVFCSTGMVTSLMYTLLR 655
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
IH K Q+ R FK ILV +DV++RG++ P V VI +P D
Sbjct: 656 EMKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDR 715
Query: 178 ADYVHRIGRTGRAGKSG 194
Y+HR+GRTGR GK G
Sbjct: 716 EQYIHRLGRTGREGKGG 732
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVR----QTMLFSATFPTDIQKLAADFLSNYIFLAVGR 56
M D GF +IRK + ++ QT+L +AT +QKL + F +
Sbjct: 275 MFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEE-----FQGIEH 329
Query: 57 VGSST---ELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALE 113
+ +ST ++ + + ++ + + L LL Q K + ++F T + A++
Sbjct: 330 LRTSTLHKKIANARHDFIKLSGGEDKLEALL--QVLEPSLAKGSKVMVFCNTLNSSRAVD 387
Query: 114 IWLSRNGFPAIAIHGDKVQMERERALRSFK--RGFTPILVATDVASRGLDIPHVAHVINY 171
+LS N + HG+ +R L+ FK G P LV TD+A+RGLD+ V HV+ +
Sbjct: 388 HYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMF 446
Query: 172 DLPRDIADYVHRIGRTGRAGKSGLATAFFS 201
D P++ DY+HR GRT R G G T+ S
Sbjct: 447 DFPKNSIDYLHRTGRTARMGAKGKVTSLVS 476
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 24/232 (10%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSN--YIFLAVGRVG 58
+LD F+ Q+ I+ Q+ P RQT+LFSAT ++ LA L + YI + V
Sbjct: 230 VLDSAFKGQLDPIISQL----PKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVT 285
Query: 59 SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLS- 117
++ ++Q + +V K + L + + + +++ + L+F+ TKK + +
Sbjct: 286 ATPTSLMQTVMIVPVEKKLDMLWSFI---KTHLN----SRILVFLSTKKQVKFVHEAFNK 338
Query: 118 -RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPH-VAHVINYDLPR 175
R G P ++HG Q +R F + +L TDV +RGLD V V+ D P
Sbjct: 339 LRPGIPLKSLHGKMSQEKRMGVYSQFIERQS-VLFCTDVLARGLDFDKAVDWVVQVDCPE 397
Query: 176 DIADYVHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWL 227
D+A Y+HR+GRT R G + F + P + ++E LQEAK VP L
Sbjct: 398 DVASYIHRVGRTARFYTQGKSLLFLT-----PSEEKMIEKLQEAK--VPIKL 442
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAV--GRVG 58
+L+ FE+ + KI++ + P RQT LFSAT + ++ LA L++ + + V GR
Sbjct: 248 ILEENFEEDMNKILKIL----PKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRK 303
Query: 59 SSTELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSR 118
+ E + Q +V + L L+ + N++ ++F T K +
Sbjct: 304 VTNEGLEQGYCVVPS---KQRLILLISFLKKNLNKK----IMVFFSTCKSVQFHTEIMKI 356
Query: 119 NGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIA 178
+ IHG Q R + F + IL+ TDVA+RGLDIP V +I YD P
Sbjct: 357 SDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPT 416
Query: 179 DYVHRIGRTGRA-GKSGLA 196
+Y+HR+GRT R G G A
Sbjct: 417 EYIHRVGRTARGEGAKGKA 435
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 113 EIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYD 172
E++L F +HG Q +R A +FK +L++TDVA+RGLD P V +I YD
Sbjct: 369 ELFLKCKTF---RLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYD 425
Query: 173 LPRDIADYVHRIGRTGRAGKSGLATAFF 200
P + +YVHR+GRT R G+ G A F
Sbjct: 426 CPGEATEYVHRVGRTARIGEKGEALLFL 453
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 15/194 (7%)
Query: 28 MLFSATFPTDIQKLAADFLSNYIFLAVGRVGSSTEL--IVQKIELVQDTD-KRNHLANLL 84
M+ SAT D KL L + +F+ G GS L ++ + L+ +T K +L LL
Sbjct: 273 MVLSATLTQDPSKLIQLDLHHPLFMTTG--GSRYRLPEKLECLRLICETGMKPVYLVALL 330
Query: 85 CRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGFPAIAIH---GDKVQMERERALRS 141
G++ + IF + + L L+ G P I G Q R + L++
Sbjct: 331 -----KSWEGEKCI--IFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKA 383
Query: 142 FKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAFFS 201
F++G +LVA+D +RG+D+ V +VINYD+P ++HR GRT RAG++G S
Sbjct: 384 FRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLS 443
Query: 202 SNKNPPIAKALVEI 215
+++ +K L ++
Sbjct: 444 NHEVRRFSKLLEKV 457
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 25 RQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGS-----STELIVQKIELVQDTDKRNH 79
+Q + +AT P + +K A L + AV G+ S L + +E+ D+
Sbjct: 353 KQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQ---- 408
Query: 80 LANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNGFPAIAIHGDKVQMERERAL 139
+ L N ++ T++F T + +A+ L + H + ER L
Sbjct: 409 -VDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANIL 467
Query: 140 RSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAF 199
F R + V TD A+RG+D+P+V+HVI D D++HRIGRT RAG+ G T+
Sbjct: 468 ADF-RETGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSL 526
Query: 200 FSSNKNPPIAKALVEILQEA 219
++ + LVE ++EA
Sbjct: 527 YTEAN-----RDLVEAIREA 541
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 116 LSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPR 175
L G + +HGD ++ R L+ FK G +LV ++++RGLD+ V+N +LP
Sbjct: 427 LEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPT 486
Query: 176 DIADYVHRIGRTGRAGKSG 194
D Y HR GRTGR G+ G
Sbjct: 487 DAVHYAHRAGRTGRLGRKG 505
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
+ + + GD R +L ++G +LV+TD+A+RG+D+P H+ N+DLP+ +
Sbjct: 363 KGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTV 422
Query: 178 ADYVHRIGRTGR 189
DY+HR GR GR
Sbjct: 423 TDYLHRAGRAGR 434
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 118 RNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDI 177
+ + + GD R +L ++G +LV+TD+A+RG+D+P H+ N+DLP+ +
Sbjct: 206 KGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTV 265
Query: 178 ADYVHRIGRTGR 189
DY+HR GR GR
Sbjct: 266 TDYLHRAGRAGR 277
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 49/229 (21%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
+L G+E +R + + P Q +L SAT +D++KL L N I L +
Sbjct: 212 LLSYGYEDNLRSVTSII----PRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDK 267
Query: 61 TELIVQKIEL----VQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWL 116
E + ++ DK H+ LL + Q LIF+ T L+++L
Sbjct: 268 EEAVPSNVQQFWISCSAQDKLLHILALLKLEVV------QKKILIFINTIDMGFRLKLFL 321
Query: 117 SRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVAS------------------- 157
+ G + ++G+ Q R L F G L+ATD S
Sbjct: 322 EKFGIKSAILNGELPQNSRLHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKK 381
Query: 158 ----------------RGLDIPHVAHVINYDLPRDIADYVHRIGRTGRA 190
RG+D V VIN+D+P+ + Y+HRIGRTGRA
Sbjct: 382 NNKRSKPKLDAEFGVVRGIDFKKVHTVINFDMPQSVTGYIHRIGRTGRA 430
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 21 PPGVRQTMLFSATFPTDIQKLAADFLS-----------------NYIFLAVGRVG----- 58
P RQT +FSAT L++DF N I + R G
Sbjct: 408 PKKKRQTFVFSATIA-----LSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNV 462
Query: 59 -----SSTELIVQKIE----LVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGA 109
++T ++ KIE ++ +K +L +L HG Q T++F +
Sbjct: 463 AIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSV------HG-QGRTIVFCTSVTDL 515
Query: 110 DALEIWLSRNGFPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVI 169
+ L G + + Q R +++ F+ IL+ATD+ +RG+DI +V +I
Sbjct: 516 RHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVRTII 575
Query: 170 NYDLPRDIADYVHRIGRTGRAGKSGLATAFFSSNK 204
+Y LP YVHR GRT RA G + A N+
Sbjct: 576 HYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNE 610
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 149 ILVATDVASRGLDIPHVAHVINYDLPRDIADYVHRIGRTGRAGKSGLATAF-FSSNKNPP 207
LV TD ASRG+D V HV+ +D PRD ++YV R+GRT R G G AF F K
Sbjct: 697 FLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTAR-GARGKGKAFIFVVGKQVG 755
Query: 208 IAKALVE 214
+A+ ++E
Sbjct: 756 LARRIIE 762
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 25/168 (14%)
Query: 1 MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS 60
+LDMGF++Q+ I+ ++ P R+T LFSAT + LA L N +L S
Sbjct: 172 LLDMGFQKQVNYIISRL----PKQRRTGLFSATQTQAVADLAKAGLRNP-YLKCEADQKS 226
Query: 61 TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG 120
++L+ L+++ +K+ + + C A VD+ L + + + K S +
Sbjct: 227 SQLVHL---LIENKNKKLVVFFMTC---ACVDYW--GLVISKIPSLK---------SISF 269
Query: 121 FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHV 168
FP HG Q R+ AL SF + +L+ TDVA+RGLDIP + ++
Sbjct: 270 FPT---HGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYI 314