Miyakogusa Predicted Gene

Lj0g3v0056439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0056439.1 Non Chatacterized Hit- tr|I1JF47|I1JF47_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57741
PE,84.8,0,HYPOTHETICAL PROTEIN,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; seg,NULL; RNI-like,NULL; no
descr,NODE_36425_length_1584_cov_28.639521.path1.1
         (455 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54650.1 | Symbols: FBL17 | RNI-like superfamily protein | ch...   525   e-149

>AT3G54650.1 | Symbols: FBL17 | RNI-like superfamily protein |
           chr3:20226004-20228882 REVERSE LENGTH=593
          Length = 593

 Score =  525 bits (1352), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 260/440 (59%), Positives = 318/440 (72%), Gaps = 8/440 (1%)

Query: 15  VCRGWRETAKRLWKAAEELKLRVPANVQVGFVASMLQKCPGIVRLSLRMESDFDSTMLAC 74
           VC+GWRET++++WKAAEEL++RVP   Q+G++ S+LQKCP ++RLSL++ESDFD+T LAC
Sbjct: 158 VCKGWRETSRKMWKAAEELRIRVPERAQIGYIGSLLQKCPRLIRLSLKIESDFDATTLAC 217

Query: 75  IAFSCPNLECMEICIFDTATNRINGDELSRFVADKRSLKSLKMEGCSNLGGFAXXXXXXX 134
           IAFSCPNLE +EI     A NRI+GDELSRFVA+KR L SLKMEGCSNLGGF+       
Sbjct: 218 IAFSCPNLEVLEITTSGAAVNRISGDELSRFVANKRGLTSLKMEGCSNLGGFSLSSSSLS 277

Query: 135 XXXXXXXXXXXKMVFNCPQLREISLEFSSQDDDGTDLITMIESLGRSCLKLQNIHIASVR 194
                      KM+FNCP L EISLEFS Q+DD TDL+TM++ LGR+C +LQNIHIAS++
Sbjct: 278 TLWLSDLHSLSKMIFNCPNLTEISLEFSRQEDDSTDLVTMVDGLGRTCTRLQNIHIASLK 337

Query: 195 LSHAAVLALTAAQLRGLRMLSLVLGSEITDASVAAIASSYPNXXXXXXXXXXXXXXXXXM 254
           LSH  VL+LTA   R LRMLSLVLG  ITDASVAAI+S Y N                 M
Sbjct: 338 LSHTVVLSLTAVNFRYLRMLSLVLGINITDASVAAISSGYKNLELLDLSGSSITDTGLGM 397

Query: 255 ICNVFPETLARLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPNSLNLPADENDES 314
           IC+V P+TL++LL+ALCPN+TSSGIQFATAQLPLLELMDCGMT+ DPNS N    EN   
Sbjct: 398 ICDVLPDTLSKLLVALCPNITSSGIQFATAQLPLLELMDCGMTVSDPNSDNPTFVENPSP 457

Query: 315 QKTSSTNLHLINQKLIIKHSRLKKLSLWGCTSLDGLYLNCPQLNDLNLNSCRNLIPERLL 374
            KT        NQK+ IKH RLKKLSLWGC+SLD L+LNCP+L DLNLN C NL PE L+
Sbjct: 458 HKTPG-----YNQKMFIKHKRLKKLSLWGCSSLDALFLNCPELMDLNLNLCSNLHPESLV 512

Query: 375 LQCPTLENVHASGCQDMLVEAIQSQVRDACSSMENQSPSKRLPDGSKRVRVPYSLSSETP 434
           LQCP L+ V+ASGCQ +L  AI+ QV +  S+ EN  P KRL D SKR++   SL  ET 
Sbjct: 513 LQCPKLQLVYASGCQGLLTGAIRKQVSENFSAGENHMPRKRLADASKRIQALPSLYQETR 572

Query: 435 EP---EKKRRRVDRRLCNVL 451
           E      KRR++++ +C ++
Sbjct: 573 EDGIYAGKRRKLEKEMCTII 592