Miyakogusa Predicted Gene
- Lj0g3v0056309.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0056309.1 Non Chatacterized Hit- tr|C0JP12|C0JP12_LOTJA
Putative basic helix-loop-helix protein BHLH4 OS=Lotus,96.14,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain; SUBFAMILY
NOT NAMED,NULL; FAMILY N,NODE_31649_length_1513_cov_169.750824.path1.1
(285 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 291 2e-79
AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 291 2e-79
AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 265 3e-71
AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 262 2e-70
AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 256 2e-68
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 138 5e-33
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 137 6e-33
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 132 3e-31
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 3e-07
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 3e-07
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr... 52 3e-07
AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 6e-07
AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 6e-07
AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 6e-07
AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 6e-07
AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 7e-07
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 51 8e-07
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 51 8e-07
AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 | chr... 50 2e-06
>AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/299 (56%), Positives = 192/299 (64%), Gaps = 20/299 (6%)
Query: 6 SDAPAADDFLEQILGLPNFASADGTDASSLHA-------PMMLQLNSGDLAA-------- 50
SD +DDF EQILGLPNF+++ S + PMMLQL SG+ +
Sbjct: 11 SDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGSHMGGLGGS 70
Query: 51 GGAGFHSPVYQLGLSLDQGKGGGFLKPDDASGSGNRFREDVV--VGARHKNAFHGQXXXX 108
G GFH+ ++ LGLSLDQGKG GFL+P+ GSG RF +DVV + K FHGQ
Sbjct: 71 GPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQ 130
Query: 109 XXXXXXXXXXXXX-XXXXXXGQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVM 167
GQATDPHS QELVP+VNKTDRA M
Sbjct: 131 PPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAM 190
Query: 168 LDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VXXXXXXXXRN-QPAWEKW 225
+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD+PLSS V R QPAWEKW
Sbjct: 191 IDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKW 250
Query: 226 SNDGTEKQVAKLMEENIGAAMQFLQSKALCIMPISLASAIYQSQPSENSSIVKPETSPP 284
SNDGTE+QVAKLMEEN+GAAMQ LQSKALC+MPISLA AIY SQP + SS+VKPE +PP
Sbjct: 251 SNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309
>AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/299 (56%), Positives = 192/299 (64%), Gaps = 20/299 (6%)
Query: 6 SDAPAADDFLEQILGLPNFASADGTDASSLHA-------PMMLQLNSGDLAA-------- 50
SD +DDF EQILGLPNF+++ S + PMMLQL SG+ +
Sbjct: 11 SDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGSHMGGLGGS 70
Query: 51 GGAGFHSPVYQLGLSLDQGKGGGFLKPDDASGSGNRFREDVV--VGARHKNAFHGQXXXX 108
G GFH+ ++ LGLSLDQGKG GFL+P+ GSG RF +DVV + K FHGQ
Sbjct: 71 GPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQ 130
Query: 109 XXXXXXXXXXXXX-XXXXXXGQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVM 167
GQATDPHS QELVP+VNKTDRA M
Sbjct: 131 PPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAM 190
Query: 168 LDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VXXXXXXXXRN-QPAWEKW 225
+DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD+PLSS V R QPAWEKW
Sbjct: 191 IDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKW 250
Query: 226 SNDGTEKQVAKLMEENIGAAMQFLQSKALCIMPISLASAIYQSQPSENSSIVKPETSPP 284
SNDGTE+QVAKLMEEN+GAAMQ LQSKALC+MPISLA AIY SQP + SS+VKPE +PP
Sbjct: 251 SNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309
>AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140117
REVERSE LENGTH=247
Length = 247
Score = 265 bits (676), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/235 (61%), Positives = 160/235 (68%), Gaps = 5/235 (2%)
Query: 55 FHSPVYQLGLSLDQGKGGGFLKPDDASGSGNRFREDVV--VGARHKNAFHGQXXXXXXXX 112
FH+ ++ LGLSLDQGKG GFL+P+ GSG RF +DVV + K FHGQ
Sbjct: 12 FHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPS 71
Query: 113 XXXXXXXXX-XXXXXXGQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEI 171
GQATDPHS QELVP+VNKTDRA M+DEI
Sbjct: 72 APHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEI 131
Query: 172 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSS-VXXXXXXXXRN-QPAWEKWSNDG 229
VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD+PLSS V R QPAWEKWSNDG
Sbjct: 132 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDG 191
Query: 230 TEKQVAKLMEENIGAAMQFLQSKALCIMPISLASAIYQSQPSENSSIVKPETSPP 284
TE+QVAKLMEEN+GAAMQ LQSKALC+MPISLA AIY SQP + SS+VKPE +PP
Sbjct: 192 TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 246
>AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=302
Length = 302
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/297 (55%), Positives = 188/297 (63%), Gaps = 26/297 (8%)
Query: 6 SDAPAADDFLEQILGLPNFASADGTDASSLHA----PMMLQLNSGD----------LAAG 51
SD DDF EQILGL NF+ + G+ S + PMMLQL SG+ G
Sbjct: 13 SDPSPTDDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGG 72
Query: 52 GAGFHSPVYQLGLSLDQGKGGGFLKPDDASGSGNRFREDVV--VGARHKNAFHGQXXXXX 109
GFH+ ++ LGLSLDQGKG GFLKPD+ +G RF++DV+ + K FHGQ
Sbjct: 73 PVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDVLDNRCSSMKPIFHGQPMSQP 129
Query: 110 XXXXXXXXXXXX-XXXXXXGQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVML 168
GQATDPHS QELVP+VNKTDRA M+
Sbjct: 130 APPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMI 189
Query: 169 DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVXXXXXXXXRNQPAWEKWSND 228
DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVT++PLSS Q WEKWSND
Sbjct: 190 DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSS-----SVEDETQAVWEKWSND 244
Query: 229 GTEKQVAKLMEENIGAAMQFLQSKALCIMPISLASAIYQSQPSE-NSSIVKPETSPP 284
GTE+QVAKLMEEN+GAAMQ LQSKALCIMPISLA AIY SQP + +SSIVKPE +PP
Sbjct: 245 GTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPP 301
>AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=297
Length = 297
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 184/294 (62%), Gaps = 25/294 (8%)
Query: 6 SDAPAADDFLEQILGLPNFASADGTDASSLHA----PMMLQLNSGD----------LAAG 51
SD DDF EQILGL NF+ + G+ S + PMMLQL SG+ G
Sbjct: 13 SDPSPTDDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGG 72
Query: 52 GAGFHSPVYQLGLSLDQGKGGGFLKPDDASGSGNRFREDVVVGARHKNAFHGQXXXXXXX 111
GFH+ ++ LGLSLDQGKG GFLKPD+ +G RF++DV+ ++
Sbjct: 73 PVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDVL--DNRCSSMKPPMSQPAPP 127
Query: 112 XXXXXXXXXXXXXXXXGQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEI 171
GQATDPHS QELVP+VNKTDRA M+DEI
Sbjct: 128 MPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEI 187
Query: 172 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVXXXXXXXXRNQPAWEKWSNDGTE 231
VDYVKFLRLQVKVLSMSRLGGAGAVAPLVT++PLSS Q WEKWSNDGTE
Sbjct: 188 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSS-----SVEDETQAVWEKWSNDGTE 242
Query: 232 KQVAKLMEENIGAAMQFLQSKALCIMPISLASAIYQSQPSE-NSSIVKPETSPP 284
+QVAKLMEEN+GAAMQ LQSKALCIMPISLA AIY SQP + +SSIVKPE +PP
Sbjct: 243 RQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPP 296
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 100/163 (61%), Gaps = 8/163 (4%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSM 187
GQATDPHS QELVP+ NKTD+A MLDEI++YV+FL+LQVKVLSM
Sbjct: 104 GQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSM 163
Query: 188 SRLGGAGAVAPLVTDIP------LSSVXXXXXXXXRNQPAW--EKWSNDGTEKQVAKLME 239
SRLGGAG+V P + + L+++ N A S TE++VAKLME
Sbjct: 164 SRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRSTEQRVAKLME 223
Query: 240 ENIGAAMQFLQSKALCIMPISLASAIYQSQPSENSSIVKPETS 282
E++G+AMQ+LQ K LC+MPISLA+AI S S+ P +S
Sbjct: 224 EDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFNPISS 266
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 93/141 (65%), Gaps = 5/141 (3%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSM 187
GQATDPHS QELVP+ NKTD+A MLDEI+DYVKFL+LQVKVLSM
Sbjct: 143 GQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 202
Query: 188 SRLGGAGAVAPLVTDIPLSSVXXXXXXXXRNQPAWEKWSNDG---TEKQVAKLMEENIGA 244
SRLGGA +V+ +++ S +Q A SND TE QVAKLMEE++G+
Sbjct: 203 SRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGN--SNDSVTMTEHQVAKLMEEDMGS 260
Query: 245 AMQFLQSKALCIMPISLASAI 265
AMQ+LQ K LC+MPISLA+AI
Sbjct: 261 AMQYLQGKGLCLMPISLATAI 281
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 93/155 (60%), Gaps = 18/155 (11%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSM 187
GQATDPHS QELVP+ NKTD+A MLDEI+DYVKFL+LQVKVLSM
Sbjct: 135 GQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 194
Query: 188 SRLGGAGAVAPLVTDIPLSSVXXXXXXXXRNQPAWEKWSNDG----TEKQVAKLMEENIG 243
SRLGGA + + +++ S E S+ G TE QVAKLMEE++G
Sbjct: 195 SRLGGAASASSQISEDAGGS--------------HENTSSSGEAKMTEHQVAKLMEEDMG 240
Query: 244 AAMQFLQSKALCIMPISLASAIYQSQPSENSSIVK 278
+AMQ+LQ K LC+MPISLA+ I + S VK
Sbjct: 241 SAMQYLQGKGLCLMPISLATTISTATCPSRSPFVK 275
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNK-TDRAVMLDEIVDYVKFLRLQVKVLS 186
GQATD HS Q+LVP N+ T +AVMLDEI++YV+ L+ QV+ LS
Sbjct: 196 GQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLS 255
Query: 187 M 187
M
Sbjct: 256 M 256
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNK-TDRAVMLDEIVDYVKFLRLQVKVLS 186
GQAT+ HS QELVP NK T +AVMLDEI++YV+ L+ QV+ LS
Sbjct: 211 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
Query: 187 M 187
M
Sbjct: 271 M 271
>AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 |
chr4:16239566-16241052 REVERSE LENGTH=352
Length = 352
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 40/80 (50%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSM 187
G ATDP S Q LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 271 GAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 330
Query: 188 SRLGGAGAVAPLVTDIPLSS 207
L +A DI LSS
Sbjct: 331 DDLWMYAPIAFNGMDIGLSS 350
>AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNK-TDRAVMLDEIVDYVKFLRLQVKVLS 186
GQAT+ HS Q+LVP NK T +AVMLDEI++YV+ L+ QV+ LS
Sbjct: 308 GQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
Query: 187 M 187
M
Sbjct: 368 M 368
>AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNK-TDRAVMLDEIVDYVKFLRLQVKVLS 186
GQAT+ HS Q+LVP NK T +AVMLDEI++YV+ L+ QV+ LS
Sbjct: 308 GQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
Query: 187 M 187
M
Sbjct: 368 M 368
>AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=485
Length = 485
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNK-TDRAVMLDEIVDYVKFLRLQVKVLS 186
GQAT+ HS Q+LVP NK T +AVMLDEI++YV+ L+ QV+ LS
Sbjct: 307 GQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 366
Query: 187 M 187
M
Sbjct: 367 M 367
>AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:2341188-2343288 REVERSE
LENGTH=456
Length = 456
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNK-TDRAVMLDEIVDYVKFLRLQVKVLS 186
GQATD HS Q+LVP NK T +A+MLDEI++YV+ L+ QV+ LS
Sbjct: 263 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
Query: 187 M 187
M
Sbjct: 323 M 323
>AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:19684160-19686871 FORWARD
LENGTH=498
Length = 498
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNK-TDRAVMLDEIVDYVKFLRLQVKVLS 186
GQATD HS Q+LVP NK T +A+MLDEI++YV+ L+ QV+ LS
Sbjct: 306 GQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 365
Query: 187 M 187
M
Sbjct: 366 M 366
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 31/36 (86%)
Query: 153 QELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSMS 188
QEL+P+ NK D+A MLDE ++Y+K L+LQV+++SM+
Sbjct: 367 QELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMA 402
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 31/36 (86%)
Query: 153 QELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSMS 188
QEL+P+ NK D+A MLDE ++Y+K L+LQV+++SM+
Sbjct: 367 QELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMA 402
>AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 38/78 (48%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSM 187
G ATDP S Q LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 242 GAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 301
Query: 188 SRLGGAGAVAPLVTDIPL 205
L +A DI L
Sbjct: 302 DDLWMYAPIAYNGMDIGL 319
>AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 |
chr1:9654753-9655806 FORWARD LENGTH=258
Length = 258
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 128 GQATDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLS 186
G ATDP S Q LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 172 GTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 230