Miyakogusa Predicted Gene
- Lj0g3v0056239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0056239.1 Non Chatacterized Hit- tr|C0P3H9|C0P3H9_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,41.1,1e-17,coiled-coil,NULL,
NODE_64740_length_942_cov_22.079618.path1.1
(223 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43680.2 | Symbols: | unknown protein; EXPRESSED IN: 21 plan... 181 2e-46
AT5G43680.1 | Symbols: | unknown protein; Has 30201 Blast hits ... 181 2e-46
>AT5G43680.2 | Symbols: | unknown protein; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages. |
chr5:17544074-17545354 FORWARD LENGTH=232
Length = 232
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 140/226 (61%), Gaps = 14/226 (6%)
Query: 1 MLGFSYGEIFLLLGATAAVIGPKDLPMISRTAGRLAGRAIGYVQLARGQFDNVMQQSQAR 60
MLG SYGE+ L++GATAA++GPKDLP+I+R GRL GRAIGY+ +ARG D VM+Q Q +
Sbjct: 1 MLGLSYGELLLIVGATAALVGPKDLPIIARAGGRLFGRAIGYINMARGHLDGVMKQPQMQ 60
Query: 61 QVHKELQDTMAQLDAIRHEIRSISFMNPAPAQRVVDN-PDQTPI-SNANTDCTKPEDTGV 118
++ KE+QD AQ+DAI H R S + +P R VDN Q P S N T
Sbjct: 61 EISKEVQDLRAQVDAISHGAR-FSLFDSSPLTRRVDNQKTQEPSPSTTNGIVTSVNVEEK 119
Query: 119 KNPIPSVIK--DSTSMPSNSCNMQSQATTYARLAESPAIKDGLLASSTGVEKDEQQLLVL 176
+ P+ K + + S S N+ +QAT++ARL+E+ K L S + VL
Sbjct: 120 QKPVDHYTKAQEFSGSSSASVNLHAQATSFARLSETVNGKTHSLNSDSP---------VL 170
Query: 177 PISAESSGLLPNRGADVKGSDIVLEAILEAEVAHNAKEFFSQPQNQ 222
P+SAE + LLP R +GSD++LEA+LEAEVAH AK FF+Q + +
Sbjct: 171 PVSAEMAKLLPQRKESARGSDLMLEAVLEAEVAHKAKSFFAQAEKE 216
>AT5G43680.1 | Symbols: | unknown protein; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr5:17544074-17545354 FORWARD LENGTH=232
Length = 232
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 140/226 (61%), Gaps = 14/226 (6%)
Query: 1 MLGFSYGEIFLLLGATAAVIGPKDLPMISRTAGRLAGRAIGYVQLARGQFDNVMQQSQAR 60
MLG SYGE+ L++GATAA++GPKDLP+I+R GRL GRAIGY+ +ARG D VM+Q Q +
Sbjct: 1 MLGLSYGELLLIVGATAALVGPKDLPIIARAGGRLFGRAIGYINMARGHLDGVMKQPQMQ 60
Query: 61 QVHKELQDTMAQLDAIRHEIRSISFMNPAPAQRVVDN-PDQTPI-SNANTDCTKPEDTGV 118
++ KE+QD AQ+DAI H R S + +P R VDN Q P S N T
Sbjct: 61 EISKEVQDLRAQVDAISHGAR-FSLFDSSPLTRRVDNQKTQEPSPSTTNGIVTSVNVEEK 119
Query: 119 KNPIPSVIK--DSTSMPSNSCNMQSQATTYARLAESPAIKDGLLASSTGVEKDEQQLLVL 176
+ P+ K + + S S N+ +QAT++ARL+E+ K L S + VL
Sbjct: 120 QKPVDHYTKAQEFSGSSSASVNLHAQATSFARLSETVNGKTHSLNSDSP---------VL 170
Query: 177 PISAESSGLLPNRGADVKGSDIVLEAILEAEVAHNAKEFFSQPQNQ 222
P+SAE + LLP R +GSD++LEA+LEAEVAH AK FF+Q + +
Sbjct: 171 PVSAEMAKLLPQRKESARGSDLMLEAVLEAEVAHKAKSFFAQAEKE 216