Miyakogusa Predicted Gene

Lj0g3v0056219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0056219.1 tr|A7SNS4|A7SNS4_NEMVE Predicted protein
OS=Nematostella vectensis GN=v1g246436 PE=4
SV=1,27.71,0.000003,GBP_C,Guanylate-binding protein, C-terminal;
Interferon-induced guanylate-binding protein 1 (GBP1),
,gene.g3948.t1.1
         (309 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38840.1 | Symbols:  | Guanylate-binding family protein | chr...   457   e-129

>AT2G38840.1 | Symbols:  | Guanylate-binding family protein |
           chr2:16227329-16232115 FORWARD LENGTH=602
          Length = 602

 Score =  457 bits (1175), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 209/293 (71%), Positives = 250/293 (85%)

Query: 1   MKDVELDELYVKRREQLKELVASMISPKIVQGKTLNGKEFVSFLEQILEALNKGEIPSTG 60
           +KD +LD  YV RR+QLK+LVAS+I PKIVQGKTLNGKEF+SFLEQIL+ALNKGEIPSTG
Sbjct: 263 LKDEDLDSTYVARRDQLKKLVASIIRPKIVQGKTLNGKEFISFLEQILDALNKGEIPSTG 322

Query: 61  SLVEVFNKGILERCLKLYSEKMATLGLPLPEESLQEAHDRSSDEVRQAFDQQHFGHHHAN 120
           SLVEVFNK I+ERC+KLY+EKM  + LP+ EESLQ AH+ + +E  +AFD QHFG  HA 
Sbjct: 323 SLVEVFNKDIVERCVKLYNEKMVRVRLPMSEESLQSAHEMAHNEAIKAFDAQHFGRQHAK 382

Query: 121 RSILQLDEEIQKIHNNVILQNEYQSSKLCEAAYTRCEDKMDQLQVLRLPSLAKFNAGSLQ 180
           +S+ QLDE++Q+++ N +L NEYQSSKLCEA YT CED MD LQ LRLPS+AKFNAG + 
Sbjct: 383 KSVDQLDEQMQEVYKNFVLANEYQSSKLCEALYTSCEDDMDHLQALRLPSMAKFNAGFVY 442

Query: 181 CYHSIENECVGPAKTNYQQRMMKMLRKSRSQFIKEYNRRLFNWLVAFSLVMVVIGRFIIK 240
           C  + E +CVGP+K NY+QR+ KM+ KSRS FIKEYN RLFNWLV FSLVMVV+GRFIIK
Sbjct: 443 CNKTFEQQCVGPSKQNYEQRLTKMMGKSRSLFIKEYNNRLFNWLVGFSLVMVVVGRFIIK 502

Query: 241 FVLIEIGAWILFIFLETYTRMFWSAESLYFNPVWHFIVATWETLVYSPILDLD 293
           F+L+E+ AWILFIFLETYTRMFW+AE+LY+NPVWHFIV TWE +VYSP+LDLD
Sbjct: 503 FILLEMAAWILFIFLETYTRMFWTAEALYYNPVWHFIVGTWENVVYSPVLDLD 555