Miyakogusa Predicted Gene
- Lj0g3v0056049.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0056049.1 Non Chatacterized Hit- tr|A5BJ29|A5BJ29_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.08,1e-17,PGR3 (PROTON GRADIENT REGULATION 3),NULL; FAMILY NOT
NAMED,NULL; PPR: pentatricopeptide repeat domai,CUFF.2460.1
(480 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 6e-90
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 8e-87
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 316 2e-86
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 315 3e-86
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 9e-85
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 7e-84
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 308 8e-84
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 1e-83
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 6e-81
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 297 1e-80
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 6e-77
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 6e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 9e-75
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 2e-74
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 275 3e-74
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 274 9e-74
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 273 2e-73
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 271 6e-73
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 270 1e-72
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 268 6e-72
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 1e-71
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 263 2e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 9e-70
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 259 2e-69
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 5e-69
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 257 1e-68
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 257 1e-68
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 257 2e-68
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 256 2e-68
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 253 2e-67
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 3e-67
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 252 5e-67
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 8e-67
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 249 3e-66
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 9e-66
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 9e-66
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 247 1e-65
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 4e-65
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 4e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 239 3e-63
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 8e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 233 2e-61
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 3e-61
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 4e-61
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 6e-61
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 7e-61
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 8e-61
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 3e-60
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 227 1e-59
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 227 1e-59
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 3e-59
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 225 6e-59
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 9e-59
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 221 9e-58
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 9e-57
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 216 3e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 7e-55
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 209 5e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 7e-54
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 7e-53
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 203 3e-52
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 6e-52
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 196 3e-50
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 194 8e-50
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 189 3e-48
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 187 1e-47
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 9e-47
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 9e-47
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 6e-44
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 9e-43
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 8e-40
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 102 5e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 1e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 84 2e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 83 5e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 83 5e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 79 5e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 9e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 78 1e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 76 5e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 72 6e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 5e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 5e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 2e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 1e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 4e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 61 1e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 61 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 60 2e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 6e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 7e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 57 3e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 51 2e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 328 bits (840), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 191/486 (39%), Positives = 271/486 (55%), Gaps = 42/486 (8%)
Query: 32 RQDPPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGD-----LT 86
R P LA+L C++ LK +H ++ T +D + L
Sbjct: 10 RFKHPKLALL-QSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLG 68
Query: 87 HASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACS 143
+A IFS I PN F++N LIR P A Y M + P TFPFL+KA S
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG---------------DLV--- 185
+ L V +Q H+ +++FG D +V N LV Y+ G D+V
Sbjct: 129 EMECVL-VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 186 -------------DARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP 232
+AR +FDE+P R+L W+ M+ GYA+N C +A+ LFE M EG
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
N + SV+S+CA G LE GER +E++ + V +ILG+ALV+M+ + G I A +F
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
+G+PE + ++W+ +I GLA HGH A+ F M G +P DVTF VLSAC HGGL+
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGF-IPRDVTFTAVLSACSHGGLV 366
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
+ G +++ +MK +GIEP++EHYGC+VD+LGR GKL EA+ I M KP+ ILGALL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
A K NTEVA+ V ++ ++P++ G +V LSN+YA AG+W + LR MKE+ +KK
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 473 PGWSLV 478
PGWSL+
Sbjct: 487 PGWSLI 492
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 256/399 (64%), Gaps = 6/399 (1%)
Query: 85 LTHASRIFSSIHQP-NTFMWNTLIRAQR---HPQTALSLYITMRRHGAL-PGKHTFPFLL 139
+++A ++FS I +P N F+WNTLIR + +A SLY MR G + P HT+PFL+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
KA +++ + + + +H+ V++ G G +V N L+ Y+ GD+ A VFD++P + L
Sbjct: 129 KAVTTMAD-VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +++ G+A+N EALAL+ M ++G +P+G T+ S+LSACA+ G L LG+R+H +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
M G+ + + L+++YA+ G + A+ LFD M ++N V+W +I GLA +G ++A
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ LF+ ME +P ++TF+G+L AC H G++ G + F M+ Y IEP+IEH+GCMV
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLL R G++ +A E IK MP +P+VVI LL A G++++A+ +IL LEP++ G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V LSNMYA W DV ++RK M + +KKVPG SLV
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 466
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ A ++F + + + WN++I P+ AL+LY M G P T LL
Sbjct: 170 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC+ + AL + K+VH +++K GL + H +N L+ Y+ G + +A+ +FDE+ ++
Sbjct: 230 SACAKIG-ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACARSGCLELGERIHE 258
WT+++ G A N EA+ LF+ M + EG P T +L AC+ G ++ G
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 259 FMRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHG 314
MR + +E + +V++ A+ G + A + MP + NVV W ++ HG
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 257/489 (52%), Gaps = 55/489 (11%)
Query: 43 DKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXX--GDLTHASRIFSSIHQPNT 100
+ C T+ L Q+HA + + + D DL +A +IF+ + Q N
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 101 FMWNTLIRA-----QRHPQTALSLYITMRRHGAL-PGKHTFPFLLKACSSLTPALPVHKQ 154
F WNT+IR + A++L+ M + P + TFP +LKAC+ T + KQ
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK-TGKIQEGKQ 149
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD---------------------------- 186
+H LK+G G D V + LVR Y + G + D
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 187 -----------------ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG 229
AR +FD++ RS+ W TM+ GY+ N +A+ +F M
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMAR 289
PN TL SVL A +R G LELGE +H + G+ + +LGSAL++MY+K G I A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
+F+ +P NV+TW+ MI G A HG DA+ F M + GV P+DV +I +L+AC HG
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR-PSDVAYINLLTACSHG 388
Query: 350 GLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGA 409
GL++ GR F M +V G+EP+IEHYGCMVDLLGR G L EA+E I MP KPD VI A
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 410 LLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
LL A + GN E+ K V ++ + P + G +V+LSNMYA G W +V +R MKE+ +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Query: 470 KKVPGWSLV 478
+K PG SL+
Sbjct: 509 RKDPGCSLI 517
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 315 bits (808), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/456 (40%), Positives = 257/456 (56%), Gaps = 20/456 (4%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXX-XXXXXXXXXGDLTHASRIFSSIHQPN 99
LA+ C+ + QLKQ+HA + T + D+ +A R+F SI +
Sbjct: 54 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHS 113
Query: 100 TFMWNTLIRAQRH----PQTALSLYITMRRHG-ALPGKHTFPFLLKACSSLTPALPVHKQ 154
+FMWNTLIRA H + A LY M G + P KHTFPF+LKAC+ + KQ
Sbjct: 114 SFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF-GFSEGKQ 172
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
VH ++K G G D +V NGL+ Y G L AR VFDE+P RSL W +M+ +
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 215 SNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK---GVEVGVIL 271
+ AL LF M FEP+G T+ SVLSACA G L LG H F+ K V + V++
Sbjct: 233 YDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM-EKEG 330
++L+ MY K G++ MA ++F GM +R++ +WN MI G ATHG E+A++ F+ M +K
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 331 VAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLE 390
PN VTF+G+L AC H G ++ GR F M Y IEP +EHYGC+VDL+ R G + E
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 391 AKELIKGMPWKPDVVILGALLEA-SKNIGNTEVAKVVTEEILALEPDNH-------GVHV 442
A +++ MP KPD VI +LL+A K + E+++ + I+ + DN G +V
Sbjct: 412 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 471
Query: 443 SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LS +YA A W DV +RK M E ++K PG S +
Sbjct: 472 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSI 507
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 311 bits (796), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 182/472 (38%), Positives = 265/472 (56%), Gaps = 43/472 (9%)
Query: 46 TTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNT 105
++ LKQ H M++T D+ G L +A +F+ PNT++ NT
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNA--GHLRYAYSVFTHQPCPNTYLHNT 83
Query: 106 LIRAQR--HPQTALSLYITMRRH----GALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
+IRA A S+ IT+ R A P TFPF+LK ++ +Q+H V
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVW-FGRQIHGQV 142
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL------------------ 201
+ FG HV GL++ Y G L DAR +FDE+ + +++
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 202 ---------------WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACAR 246
WT ++ GYA++ ++EA+ +F+ M+ E EP+ TL +VLSACA
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 247 SGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
G LELGERI ++ +G+ V L +A+++MYAK+G I A +F+ + ERNVVTW +
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
I GLATHGH +AL++F M K GV PNDVTFI +LSAC H G +D+G+ +F SM++ Y
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVR-PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKY 381
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVV 426
GI P IEHYGCM+DLLGR GKL EA E+IK MP+K + I G+LL AS + E+ +
Sbjct: 382 GIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERA 441
Query: 427 TEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
E++ LEP+N G ++ L+N+Y+ G W + +R MK +KK+ G S +
Sbjct: 442 LSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSI 493
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 308 bits (788), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 166/439 (37%), Positives = 255/439 (58%), Gaps = 13/439 (2%)
Query: 48 VEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLI 107
V+QL+QVHA ++VT TH +F S+ P+ F++N++I
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHL--LFLSVPLPDDFLFNSVI 79
Query: 108 RAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGL 164
++ R P ++ Y M P +TF ++K+C+ L+ AL + K VH H + G
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS-ALRIGKGVHCHAVVSGF 138
Query: 165 GLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEG 224
GLD++V LV YS GD+ AR VFD +P +S+ W ++V G+ QN ++EA+ +F
Sbjct: 139 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 225 MVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGA 284
M GFEP+ AT S+LSACA++G + LG +H+++ +G+++ V LG+AL+N+Y++ G
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 285 IAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLS 344
+ AR++FD M E NV W MI THG+ + A+ LF ME + +PN+VTF+ VLS
Sbjct: 259 VGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLS 318
Query: 345 ACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI-----KGMP 399
AC H GL++ GR V+ M Y + P +EH+ CMVD+LGR G L EA + I G
Sbjct: 319 ACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKA 378
Query: 400 WKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLR 459
P + A+L A K N ++ + + ++ALEPDN G HV LSN+YA +G+ +V
Sbjct: 379 TAP--ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSH 436
Query: 460 LRKTMKEERLKKVPGWSLV 478
+R M L+K G+S++
Sbjct: 437 IRDGMMRNNLRKQVGYSVI 455
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 160/334 (47%), Gaps = 14/334 (4%)
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
P + +QVHAH++ G G + L+ + + +F +P L+ +++
Sbjct: 20 PRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVI 79
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
++ +A + M++ P+ T SV+ +CA L +G+ +H V G
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
+ + +ALV Y+K G + AR++FD MPE+++V WN ++ G +G ++A+ +F M
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
+ G P+ TF+ +LSAC G + +G V + + G++ ++ +++L R G
Sbjct: 200 RESGFE-PDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCG 257
Query: 387 KLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD-----NHGVH 441
+ +A+E+ M + +V A++ A G + A E +E D N+
Sbjct: 258 DVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQA---VELFNKMEDDCGPIPNNVTF 313
Query: 442 VSLSNMYAEAGEWQDVLRLRKTM-KEERLKKVPG 474
V++ + A AG ++ + K M K RL +PG
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTKSYRL--IPG 345
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/430 (38%), Positives = 243/430 (56%), Gaps = 37/430 (8%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITM-RRHGALPGKHTFPFLL 139
D+ +A+R+F+ + PN F++N++IRA H + +Y + R+ LP + TFPF+
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR-- 197
K+C+SL + KQVH H+ KFG N L+ Y DLVDA VFDE+ R
Sbjct: 117 KSCASLGSCY-LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 198 -----------------------------SLSLWTTMVCGYAQNFCSNEALALFEGMVAE 228
++ WT M+ GY C EA+ F M
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
G EP+ +L SVL +CA+ G LELG+ IH + +G + +AL+ MY+K G I+ A
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
+LF M ++V++W+ MI G A HG+ A+ F M++ V PN +TF+G+LSAC H
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSH 354
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
G+ G F M+ Y IEPKIEHYGC++D+L R GKL A E+ K MP KPD I G
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWG 414
Query: 409 ALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEER 468
+LL + + GN +VA V + ++ LEP++ G +V L+N+YA+ G+W+DV RLRK ++ E
Sbjct: 415 SLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNEN 474
Query: 469 LKKVPGWSLV 478
+KK PG SL+
Sbjct: 475 MKKTPGGSLI 484
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 306 bits (785), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/471 (36%), Positives = 258/471 (54%), Gaps = 37/471 (7%)
Query: 44 KCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGD-LTHASRIFSSIHQPNTFM 102
+C+ E+LKQ+HA+M+ T D D L +A +F +P+TF+
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 103 WNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
WN +IR P+ +L LY M A +TFP LLKACS+L+ A Q+HA +
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS-AFEETTQIHAQI 141
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR--------------------SL 199
K G D + N L+ Y+V+G+ A +FD IP +L
Sbjct: 142 TKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIAL 201
Query: 200 SL-----------WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSG 248
+L WTTM+ GY Q + EAL LF M EP+ +LA+ LSACA+ G
Sbjct: 202 TLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 249 CLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMIC 308
LE G+ IH ++ + + +LG L++MYAK G + A ++F + +++V W +I
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 309 GLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGI 368
G A HGH +A+S F M+K G+ PN +TF VL+AC + GL++ G+ +F SM+ Y +
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIK-PNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 369 EPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE 428
+P IEHYGC+VDLLGR G L EAK I+ MP KP+ VI GALL+A + N E+ + + E
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440
Query: 429 EILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVT 479
++A++P + G +V +N++A +W R+ MKE+ + KVPG S ++
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 491
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 257/480 (53%), Gaps = 41/480 (8%)
Query: 35 PPTLAVLADKCTTVEQLKQVHAQMVV-TARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
P LAVL DK +V+++ Q+HA ++ + G + H+ +F
Sbjct: 29 PEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFH 88
Query: 94 SIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
P+ F++ I A LY+ + P + TF LLK+CS+ + L
Sbjct: 89 QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKL- 147
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL----------- 199
+H HVLKFGLG+D +VA GLV Y+ GD+V A+ VFD +P RSL
Sbjct: 148 ----IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYA 203
Query: 200 --------------------SLWTTMVCGYAQNFCSNEALALFEGMVAEGF-EPNGATLA 238
W M+ GYAQ+ N+AL LF+ ++AEG +P+ T+
Sbjct: 204 KQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVV 263
Query: 239 SVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER 298
+ LSAC++ G LE G IH F++ + + V + + L++MY+K G++ A +F+ P +
Sbjct: 264 AALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 299 NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
++V WN MI G A HG+ +DAL LF M+ P D+TFIG L AC H GL++ G +
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 359 FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIG 418
F SM YGI+PKIEHYGC+V LLGR G+L A E IK M D V+ ++L + K G
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Query: 419 NTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ + K + E ++ L N G++V LSN+YA G+++ V ++R MKE+ + K PG S +
Sbjct: 444 DFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 180/399 (45%), Gaps = 42/399 (10%)
Query: 102 MWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLK 161
M ++ + A PQ LS T R LP L+ S+ L Q+HA +L+
Sbjct: 1 MASSPLLATSLPQNQLSTTATARFR--LPPPEKLAVLIDKSQSVDEVL----QIHAAILR 54
Query: 162 FGLGLDSH--VAN-GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEA 218
L L V N L R Y+ G + + +F + L L+T + + N ++A
Sbjct: 55 HNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQA 114
Query: 219 LALFEGMVAEGFEPNGATLASVLSACA-RSG------CLELGERIHEFMRVKGVEV---- 267
L+ +++ PN T +S+L +C+ +SG L+ G I ++ V+V
Sbjct: 115 FLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKG 174
Query: 268 ----------------GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
++ +A++ YAK G + AR LFD M ER++V+WN MI G A
Sbjct: 175 GDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA 234
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
HG DAL LF+ + EG P+++T + LSAC G L+ GR + +K+ I
Sbjct: 235 QHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR-IRLN 293
Query: 372 IEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE-- 429
++ ++D+ + G L EA + P K D+V A++ G ++ A + E
Sbjct: 294 VKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 430 -ILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
I L+P + + A AG + +R+ ++M +E
Sbjct: 353 GITGLQPTDI-TFIGTLQACAHAGLVNEGIRIFESMGQE 390
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/491 (34%), Positives = 263/491 (53%), Gaps = 52/491 (10%)
Query: 32 RQDP----------PTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXX 81
R+DP TL + C + + +HA+++ T F+D
Sbjct: 16 RRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRT--FHDQDAFVVFELIRVCST 73
Query: 82 XGDLTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFL 138
+ +A +FS + PN +++ +I + +SLY M + LP + +
Sbjct: 74 LDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSV 133
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR- 197
LKAC L V +++HA VLK G G V ++ Y SG+LV+A+ +FDE+P R
Sbjct: 134 LKACD-----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRD 188
Query: 198 -------------------SLSL-----------WTTMVCGYAQNFCSNEALALFEGMVA 227
+L L WT M+ G +N N+AL LF M
Sbjct: 189 HVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM 248
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
E N T VLSAC+ G LELG +H F+ + +E+ +G+AL+NMY++ G I
Sbjct: 249 ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINE 308
Query: 288 ARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
AR++F M +++V+++N MI GLA HG +A++ F +M G PN VT + +L+AC
Sbjct: 309 ARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR-PNQVTLVALLNACS 367
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVIL 407
HGGLLD+G +VF SMK V+ +EP+IEHYGC+VDLLGR G+L EA I+ +P +PD ++L
Sbjct: 368 HGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIML 427
Query: 408 GALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
G LL A K GN E+ + + + + E + G +V LSN+YA +G+W++ +R++M++
Sbjct: 428 GTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDS 487
Query: 468 RLKKVPGWSLV 478
++K PG S +
Sbjct: 488 GIEKEPGCSTI 498
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 295 bits (754), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 245/440 (55%), Gaps = 13/440 (2%)
Query: 45 CTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIF--SSIHQPNTFM 102
C++++ L Q+H Q+ +++ ND DL A + SS P+T
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPST-- 80
Query: 103 WNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
WN L R + P ++ +Y M+R G P K TFPFLLKAC+S L +Q+ V
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFL-GLTAGRQIQVEV 139
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEAL 219
LK G D +V N L+ Y DAR VFDE+ R++ W +++ +N N
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 220 ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMY 279
F M+ + F P+ T+ +LSAC G L LG+ +H + V+ +E+ LG+ALV+MY
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 280 AKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF 339
AK+G + AR +F+ M ++NV TW+ MI GLA +G E+AL LF M KE PN VTF
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 340 IGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP 399
+GVL AC H GL+D G F M+ ++ I+P + HYG MVD+LGR G+L EA + IK MP
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 400 WKPDVVILGALLEASK---NIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQD 456
++PD V+ LL A + + + + V + ++ LEP G V ++N +AEA W +
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 457 VLRLRKTMKEERLKKVPGWS 476
+R+ MKE ++KK+ G S
Sbjct: 438 AAEVRRVMKETKMKKIAGES 457
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 14/283 (4%)
Query: 132 KHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVS--GDLVDARF 189
KH LK CSS+ L +H Q+H L+ DS + + LVR S+S DL AR
Sbjct: 13 KHQCLIFLKLCSSIKHLLQIHGQIHLSSLQN----DSFIISELVRVSSLSLAKDLAFART 68
Query: 190 VFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGC 249
+ + S W + GY+ + E++ ++ M G +PN T +L ACA
Sbjct: 69 LLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG 128
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
L G +I + G + V +G+ L+++Y + ARK+FD M ERNVV+WN ++
Sbjct: 129 LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTA 188
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
L +G + F M + P++ T + +LSAC GG L +G+ V S V +E
Sbjct: 189 LVENGKLNLVFECFCEMIGKRFC-PDETTMVVLLSAC--GGNLSLGKLVH-SQVMVRELE 244
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGM----PWKPDVVILG 408
+VD+ + G L A+ + + M W +I+G
Sbjct: 245 LNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVG 287
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 246/429 (57%), Gaps = 38/429 (8%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
+L +A ++F TF++N LI+A P ++ LY + G P HTF F+
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI------ 194
A +S + A P+ + +H+ + G DS L+ Y+ G L AR VFDE+
Sbjct: 91 ASASFSSARPL-RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP 149
Query: 195 -------------------------PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAE- 228
P ++++ WTT++ G++QN +EAL +F M +
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDK 209
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
+PN T+ SVL ACA G LE+G R+ + R G + + +A + MY+K G I +A
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 289 RKLFDGM-PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
++LF+ + +RN+ +WN MI LATHG ++AL+LF M +EG P+ VTF+G+L AC
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREG-EKPDAVTFVGLLLACV 328
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVIL 407
HGG++ G+++F SM+ V+ I PK+EHYGCM+DLLGR GKL EA +LIK MP KPD V+
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 408 GALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
G LL A GN E+A++ +E + LEP N G V +SN+YA +W VLR+RK MK+E
Sbjct: 389 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKE 448
Query: 468 RLKKVPGWS 476
+ K G+S
Sbjct: 449 TMTKAAGYS 457
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 35/235 (14%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
KQ+HAH L+ G+ + L+ + +LV AR +FD + L+ ++ Y +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLL----LIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
+E++ L+ + +G P+ T + +A A +H G E
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 273 SALVNMYAKNGAIAMARK-------------------------------LFDGMPERNVV 301
+ L+ YAK GA+ AR+ LFD MP +NV
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
+W +I G + +G+ +AL +F MEK+ PN +T + VL AC + G L++GR
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKH-TFPFL 138
GD+ A +F S+ + N W T+I + AL +++ M + ++ H T +
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS-R 197
L AC++L L + +++ + + G + +V N + YS G + A+ +F+E+ + R
Sbjct: 222 LPACANLG-ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR 280
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+L W +M+ A + +EAL LF M+ EG +P+ T +L AC G + G+ +
Sbjct: 281 NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELF 340
Query: 258 EFM-RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGH 315
+ M V + + ++++ + G + A L MP + + V W ++ + HG+
Sbjct: 341 KSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGN 400
Query: 316 VEDA 319
VE A
Sbjct: 401 VEIA 404
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 257/448 (57%), Gaps = 37/448 (8%)
Query: 38 LAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQ 97
LA L CT++ +++++H GD+ SRI
Sbjct: 50 LATLLSNCTSLARVRRIH---------------------------GDIFR-SRILD--QY 79
Query: 98 PNTFMWNTLIRAQ-RH--PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
P F+WN ++R+ RH P A+ +Y+ M R LP +++ P ++KA + + K+
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHD-FTLGKE 138
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
+H+ ++ G D +G + Y +G+ +AR VFDE P R L W ++ G
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 215 SNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE-FMRVKGVEVG-VILG 272
+NEA+ +F M G EP+ T+ SV ++C G L L ++H+ ++ K E +++
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
++L++MY K G + +A +F+ M +RNVV+W+ MI G A +G+ +AL F M + GV
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAK 392
PN +TF+GVLSAC HGGL++ G+ F MK+ + +EP + HYGC+VDLL R G+L EAK
Sbjct: 319 -PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 393 ELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAG 452
++++ MP KP+V++ G L+ + G+ E+A+ V ++ LEP N GV+V L+N+YA G
Sbjct: 378 KVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRG 437
Query: 453 EWQDVLRLRKTMKEERLKKVPGWSLVTT 480
W+DV R+RK MK +++ K+P +S +T
Sbjct: 438 MWKDVERVRKLMKTKKVAKIPAYSYAST 465
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 163/438 (37%), Positives = 245/438 (55%), Gaps = 45/438 (10%)
Query: 85 LTHASRIFSSIH-QPNTFMWNTLIRAQRH----PQ--TALSLYITMRRHGALPGKHTFPF 137
+ +A+ IF H + +F+WN +IRA H PQ + +S+Y+ MR H P HTFPF
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLV------------ 185
LL + + LP+ ++ HA +L FGL D V L+ YS GDL
Sbjct: 68 LLPSFHN-PLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 186 -------------------DARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
DAR +FDE+P R++ W+ ++ GY EAL LF M
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 227 ----AEGF-EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK 281
E F PN T+++VLSAC R G LE G+ +H ++ VE+ ++LG+AL++MYAK
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 282 NGAIAMARKLFDGM-PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFI 340
G++ A+++F+ + +++V ++ MIC LA +G ++ LF M PN VTF+
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 341 GVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW 400
G+L AC H GL++ G+ F M +GI P I+HYGCMVDL GR G + EA+ I MP
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 401 KPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRL 460
+PDV+I G+LL S+ +G+ + + + ++ L+P N G +V LSN+YA+ G W +V +
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 461 RKTMKEERLKKVPGWSLV 478
R M+ + + KVPG S V
Sbjct: 427 RHEMEVKGINKVPGCSYV 444
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 13/247 (5%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMR-----RHGALPGKHT 134
G + A ++F + + N W+ LI + AL L+ M+ P + T
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
+L AC L AL K VHA++ K+ + +D + L+ Y+ G L A+ VF+ +
Sbjct: 202 MSTVLSACGRLG-ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 195 PS-RSLSLWTTMVCGYAQNFCSNEALALFEGM-VAEGFEPNGATLASVLSACARSGCLEL 252
S + + ++ M+C A ++E LF M ++ PN T +L AC G +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 253 GERIHEFMRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGL 310
G+ + M + G+ + +V++Y ++G I A MP E +V+ W ++ G
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 311 ATHGHVE 317
G ++
Sbjct: 381 RMLGDIK 387
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 254/458 (55%), Gaps = 13/458 (2%)
Query: 30 ITRQDPPTLAVLAD----KCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDL 85
+ +Q P T +L++ + +QLK++HA +V+ F++ GD+
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKPKQLKKIHA-IVLRTGFSEKNSLLTQLLENLVVI-GDM 59
Query: 86 THASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
+A ++F +H+P F+WNTL + + P +L LY MR G P + T+PF++KA
Sbjct: 60 CYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAI 119
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
S L +HAHV+K+G G VA LV Y G+L A F+F+ + + L W
Sbjct: 120 SQLGD-FSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAW 178
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
+ Q S AL F M A+ + + T+ S+LSAC + G LE+GE I++ R
Sbjct: 179 NAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 238
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
+ ++ +I+ +A ++M+ K G AR LF+ M +RNVV+W+ MI G A +G +AL+L
Sbjct: 239 EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTL 298
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM--KTVYGIEPKIEHYGCMVD 380
F M+ EG+ PN VTF+GVLSAC H GL++ G+ F M +EP+ EHY CMVD
Sbjct: 299 FTTMQNEGLR-PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
LLGR G L EA E IK MP +PD I GALL A + + + V + ++ PD
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
HV LSN+YA AG+W V ++R M++ KKV +S V
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 235/432 (54%), Gaps = 40/432 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ-----TALSLYITMRRHGALPGKHTFPF 137
G + +A +F + + WNT+I +R+ + A L+ M+ +P +
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMI--ERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCN 217
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSH---------------------------- 169
++ AC T + ++ ++ +++ + +D+H
Sbjct: 218 IVSACGR-TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 170 ---VANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
V+ +V YS G L DA+ +FD+ + L WTTM+ Y ++ EAL +FE M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
G +P+ ++ SV+SACA G L+ + +H + V G+E + + +AL+NMYAK G +
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
R +F+ MP RNVV+W+ MI L+ HG DALSLF M++E V PN+VTF+GVL C
Sbjct: 397 ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE-PNEVTFVGVLYGC 455
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVI 406
H GL++ G+ +F SM Y I PK+EHYGCMVDL GR L EA E+I+ MP +VVI
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVI 515
Query: 407 LGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
G+L+ A + G E+ K + IL LEPD+ G V +SN+YA W+DV +R+ M+E
Sbjct: 516 WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEE 575
Query: 467 ERLKKVPGWSLV 478
+ + K G S +
Sbjct: 576 KNVFKEKGLSRI 587
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 188/421 (44%), Gaps = 47/421 (11%)
Query: 35 PPTLAVLADK--------CTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLT 86
PP +A A C ++ +KQ+HA ++ T +H +L+
Sbjct: 4 PPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVI--NHKLNSFLFNLSVSSSSINLS 61
Query: 87 HASRIFSSI-HQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
+A +FSSI P + ++N +R P+ + Y +R G + +F +LKA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
S ++ AL ++H K D V G + Y+ G + AR VFDE+ R + W
Sbjct: 122 SKVS-ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
TM+ Y + +EA LFE M P+ L +++SAC R+G + I+EF+
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
V + L +ALV MYA G + MAR+ F M RN+ M+ G + G ++DA +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 323 FENMEKEGVAV------------------------------PNDVTFIGVLSACCHGGLL 352
F+ EK+ + P+ V+ V+SAC + G+L
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
D + V S V G+E ++ ++++ + G L +++ + MP + +VV +++
Sbjct: 361 DKAKWVH-SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMIN 418
Query: 413 A 413
A
Sbjct: 419 A 419
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 224/400 (56%), Gaps = 6/400 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G ASR+F + W +I A+ ++ M++ G + T +L
Sbjct: 152 GLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVL 211
Query: 140 KACSSLTPALPVHKQVHAHVLKFG-LGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
KA + + + VH L+ G + D + + LV Y DA+ VFDE+PSR+
Sbjct: 212 KAAGKVED-VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ WT ++ GY Q+ C ++ + +FE M+ PN TL+SVLSACA G L G R+H
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
+M +E+ G+ L+++Y K G + A +F+ + E+NV TW MI G A HG+ D
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
A LF M V+ PN+VTF+ VLSAC HGGL++ GR +F SMK + +EPK +HY CM
Sbjct: 391 AFDLFYTMLSSHVS-PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
VDL GR G L EAK LI+ MP +P V+ GAL + + E+ K ++ L+P +
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G + L+N+Y+E+ W +V R+RK MK++++ K PG+S +
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 158/314 (50%), Gaps = 16/314 (5%)
Query: 87 HASRIFSSIHQPNTFMWNTLIRAQRHPQTALSL--------YITMRRHGALPGKHTFPFL 138
+A R+ + + +W++LI H ++L Y MRR+G +P +HTFP L
Sbjct: 54 YARRLLCQLQTLSIQLWDSLIG---HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPL 110
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
LKA L + P Q HAH++KFGL D V N L+ YS SG A +FD +
Sbjct: 111 LKAVFKLRDSNPF--QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKD 168
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ WT M+ G+ +N ++EA+ F M G N T+ SVL A + + G +H
Sbjct: 169 VVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHG 228
Query: 259 -FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
++ V+ V +GS+LV+MY K A+K+FD MP RNVVTW +I G +
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+ +FE M K VA PN+ T VLSAC H G L GR V C M IE
Sbjct: 289 KGMLVFEEMLKSDVA-PNEKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEINTTAGTT 346
Query: 378 MVDLLGRGGKLLEA 391
++DL + G L EA
Sbjct: 347 LIDLYVKCGCLEEA 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 46/309 (14%)
Query: 149 LPVH----KQVHAHVLK---FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
LP+H KQ+H +L F D ++ L RC + + AR + ++ + S+ L
Sbjct: 10 LPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQL 69
Query: 202 WTTMVCGYAQNFCSNEALAL--FEGMVAEGFEPNGATLASVLSACAR---SGCLELGERI 256
W +++ ++ N L+ + M G P+ T +L A + S + I
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHI 129
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
+F G++ + ++L++ Y+ +G A +LFDG +++VVTW MI G +G
Sbjct: 130 VKF----GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSAC-----------CHGGLLDVGR---DVFCSM 362
+A+ F M+K GVA N++T + VL A HG L+ GR DVF
Sbjct: 186 SEAMVYFVEMKKTGVAA-NEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG- 243
Query: 363 KTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEV 422
+VD+ G+ +A+++ MP + +VV AL+ +
Sbjct: 244 -------------SSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAGYVQSRCFDK 289
Query: 423 AKVVTEEIL 431
+V EE+L
Sbjct: 290 GMLVFEEML 298
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 277 bits (709), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 252/451 (55%), Gaps = 23/451 (5%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNT 100
L KC +++ LKQ+HAQ ++T + H L++A I I P+
Sbjct: 15 LISKCKSLQNLKQIHAQ-IITIGLSHHTYPLSKLLHLSSTVC--LSYALSILRQIPNPSV 71
Query: 101 FMWNTLIRA--QRHPQT----ALSLY---ITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
F++NTLI + H T A SLY ++ R + P + T+P L KA S
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA-SGFDAQWHR 130
Query: 152 H-KQVHAHVLKF--GLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCG 208
H + +HAHVLKF + D V LV Y+ G L +AR +F+ I L+ W T++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 209 YAQNF---CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV 265
YA + E L LF M PN +L +++ +CA G G H ++ +
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 266 EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFEN 325
+ +G++L+++Y+K G ++ ARK+FD M +R+V +N MI GLA HG ++ + L+++
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 326 MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRG 385
+ +G+ VP+ TF+ +SAC H GL+D G +F SMK VYGIEPK+EHYGC+VDLLGR
Sbjct: 308 LISQGL-VPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRS 366
Query: 386 GKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLS 445
G+L EA+E IK MP KP+ + + L +S+ G+ E ++ + +L LE +N G +V LS
Sbjct: 367 GRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLS 426
Query: 446 NMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
N+YA W DV + R+ MK+ R+ K PG S
Sbjct: 427 NIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 257/487 (52%), Gaps = 52/487 (10%)
Query: 45 CTTVEQLKQVHAQMVVTAR----------FNDHXXXXXXXXXXXXXXXGDLTHASRIFSS 94
C T++ L Q HAQ + + R F + +++A+ +F
Sbjct: 14 CRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRF 73
Query: 95 IHQPNTFMWNTLIR-AQRHPQTALS---LYITMRRHGALPGKHTFPFLLKACSSLTPA-L 149
I P+TF +NT+IR H ++LS ++ MRR P HTFPF+ KAC++ L
Sbjct: 74 ITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDL 133
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSV----------------------------- 180
+ K +H L+FGL D N L+R YS+
Sbjct: 134 TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGL 193
Query: 181 --SGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLA 238
+ ++V AR +FD +P R L W +++ GYAQ EA+ LF+ MVA G +P+ +
Sbjct: 194 VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV 253
Query: 239 SVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER 298
S LSACA+SG + G+ IH++ + K + + L + LV+ YAK G I A ++F+ ++
Sbjct: 254 STLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK 313
Query: 299 NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
+ TWN MI GLA HG+ E + F M G+ P+ VTFI VL C H GL+D R++
Sbjct: 314 TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK-PDGVTFISVLVGCSHSGLVDEARNL 372
Query: 359 FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW----KPDVVILGALLEAS 414
F M+++Y + +++HYGCM DLLGR G + EA E+I+ MP + ++ LL
Sbjct: 373 FDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGC 432
Query: 415 KNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM-KEERLKKVP 473
+ GN E+A+ + AL P++ GV+ + MYA A W++V+++R+ + +++++KK
Sbjct: 433 RIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNV 492
Query: 474 GWSLVTT 480
G+S V +
Sbjct: 493 GFSKVLS 499
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 220/402 (54%), Gaps = 8/402 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFM--WNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPF 137
GDL A +F +I + + + WN++ +A A LY M R P TF
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFIN 261
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
L +C + L + +H+H + G D N + YS S D AR +FD + SR
Sbjct: 262 LAASCQN-PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+ WT M+ GYA+ +EALALF M+ G +P+ TL S++S C + G LE G+ I
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 258 EFMRVKGVEV-GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
+ G + V++ +AL++MY+K G+I AR +FD PE+ VVTW MI G A +G
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
+AL LF M PN +TF+ VL AC H G L+ G + F MK VY I P ++HY
Sbjct: 441 LEALKLFSKMIDLDYK-PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS 499
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
CMVDLLGR GKL EA ELI+ M KPD I GALL A K N ++A+ E + LEP
Sbjct: 500 CMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQ 559
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V ++N+YA AG W R+R MK+ +KK PG S++
Sbjct: 560 MAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 171/390 (43%), Gaps = 42/390 (10%)
Query: 103 WNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
WN IR + P +L L+ M+R G P TFPF+ KAC+ L + + VHAH+
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD-VGCCEMVHAHL 78
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEAL 219
+K D V V + + A VF+ +P R + W M+ G+ Q+ +++A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 220 ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMY 279
+LF M P+ T+ +++ + + L+L E +H GV+V V + + ++ Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 280 AKNGAIAMARKLFDGMP--ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV 337
K G + A+ +F+ + +R VV+WN M + G DA L+ M +E P+
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK-PDLS 257
Query: 338 TFIGVLSACCHGGLLDVGR------------------DVF----------CSMKTVYGI- 368
TFI + ++C + L GR + F CS + ++ I
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 369 -EPKIEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAK 424
+ M+ G + EA L M KPD+V L +L+ G+ E K
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 425 VVT--EEILALEPDNHGVHVSLSNMYAEAG 452
+ +I + DN + +L +MY++ G
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCG 407
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 247/460 (53%), Gaps = 15/460 (3%)
Query: 33 QDPPTLAVLADKCTTVEQLKQVHAQMVVTA--RFNDHXXXXXXXXXXXXXXXGDLTHASR 90
Q +L + + +C TV+Q+K H+ ++ R +AS
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 91 IFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITM---RRHGALPGKHTFPFLLKACSS 144
IF SI PN+F+++T+IR P L ++ M P TF FL+ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 145 LTPALPVHKQVHAHVLKFGLGL-DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
V KQ+H V+K G+ L D HV G++R Y L DAR VFDEIP + W
Sbjct: 129 -ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWD 187
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
++ GY + +E L +F+ M+ G EP+ ++ + L+ACA+ G L G+ IHEF++ K
Sbjct: 188 VLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 264 G-VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
+E V +G+ALV+MYAK G I A ++F+ + RNV +W +I G A +G+ + A +
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
+ +E+E P+ V +GVL+AC HGG L+ GR + +M+ YGI PK EHY C+VDL+
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 383 GRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN----H 438
R G+L +A +LI+ MP KP + GALL + N E+ ++ + +L LE N
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEE 427
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
V LSN+Y + ++R +++ ++K PGWSL+
Sbjct: 428 AALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLL 467
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 237/472 (50%), Gaps = 37/472 (7%)
Query: 43 DKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFM 102
D C + Q+KQ+H ++ +A R+ + N F+
Sbjct: 57 DDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFL 116
Query: 103 WNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
W +IR + A+++Y MR+ P TF LLKAC ++ L + +Q HA
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD-LNLGRQFHAQT 175
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR---------------------- 197
+ +V N ++ Y + AR VFDE+P R
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 198 ---------SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSG 248
+ WT MV G+AQN EAL F+ M G + T+A +SACA+ G
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 249 CLELGERIHEFMRVKGVEVG--VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
+ +R + + G V++GSAL++MY+K G + A +F M +NV T++ M
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
I GLATHG ++AL LF M + PN VTF+G L AC H GL+D GR VF SM +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVV 426
G++P +HY CMVDLLGR G+L EA ELIK M +P + GALL A + N E+A++
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 427 TEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
E + LEPD G ++ LSN+YA AG+W VLR+RK +KE+ LKK P S V
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 253/504 (50%), Gaps = 69/504 (13%)
Query: 35 PPTLAVLADKCTTVEQLKQVHAQMVVTARFND-HXXXXXXXXXXXXXXXGDLTHASRIFS 93
P + ++ ++ +++Q HA M+ T F+D +++A I +
Sbjct: 39 PVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILN 98
Query: 94 SIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
I PN F N++IRA + P+ AL+++ M P K++F F+LKAC++
Sbjct: 99 RIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFC-GFE 157
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG---------------------------- 182
+Q+H +K GL D V N LV Y SG
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 183 --DLVD-ARFVFDEIPSRSLSLWTTMVCGYA---------QNF----------------- 213
LVD AR +FDE+ R++ W M+ GYA + F
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 214 -----CSNEALALFEGMVAEGFE-PNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
C NE L +F M+ + E P+G TL SVLSACA G L GE +H ++ G+E+
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENME 327
L +ALV+MY+K G I A ++F +R+V TWN +I L+ HG +DAL +F M
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 328 KEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
EG PN +TFIGVLSAC H G+LD R +F M +VY +EP IEHYGCMVDLLGR GK
Sbjct: 398 YEGFK-PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGK 456
Query: 388 LLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNM 447
+ EA+EL+ +P ++L +LL A K G E A+ + +L L + + +SN+
Sbjct: 457 IEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNL 516
Query: 448 YAEAGEWQDVLRLRKTMKEERLKK 471
YA G W+ V+ R+ M+ ER+ +
Sbjct: 517 YASDGRWEKVIDGRRNMRAERVNR 540
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 35/343 (10%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGD---LVDARFVFDEIPSRSLSLWTTMVCGY 209
+Q HA +LK GL D+ A+ LV + + + + A + + I S + +++ Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
A + AL +F M+ P+ + VL ACA E G +IH G+ V
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE 329
+ + LVN+Y ++G +ARK+ D MP R+ V+WN ++ G V++A +LF+ ME+
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEER 235
Query: 330 GVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMK-----TVYGIEPKIEHYGCMVDLLGR 384
V N ++S GL+ ++VF SM + + H GC ++L
Sbjct: 236 NVESWN-----FMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEV 290
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHV-- 442
K+L+ KPD L ++L A ++G+ + V I D HG+ +
Sbjct: 291 FNKMLDDS------TEKPDGFTLVSVLSACASLGSLSQGEWVHVYI-----DKHGIEIEG 339
Query: 443 ----SLSNMYAEAGEWQDVLR-LRKTMKEERLKKVPGWSLVTT 480
+L +MY++ G+ L R T K + V W+ + +
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRATSK----RDVSTWNSIIS 378
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 252/479 (52%), Gaps = 39/479 (8%)
Query: 36 PTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSI 95
P +A+L D T ++++Q+HA++ V D L +A++I
Sbjct: 8 PAIALL-DSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS 66
Query: 96 HQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGA--LPGKHTFPFLLKACSSLTPALP 150
+P F N++IRA P+ + Y + G P +T FL++AC+ L
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLR-MRE 125
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYS------------------------------- 179
QVH ++ G D HV GL+ Y+
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 180 VSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLAS 239
GD+V AR +F+ +P R W M+ GYAQ S EAL +F M EG + NG + S
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 240 VLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN 299
VLSAC + G L+ G H ++ +++ V L + LV++YAK G + A ++F GM E+N
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 300 VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF 359
V TW+ + GLA +G E L LF M+++GV PN VTF+ VL C G +D G+ F
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGV-TPNAVTFVSVLRGCSVVGFVDEGQRHF 364
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN 419
SM+ +GIEP++EHYGC+VDL R G+L +A +I+ MP KP + +LL AS+ N
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKN 424
Query: 420 TEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
E+ + ++++L LE NHG +V LSN+YA++ +W +V +R++MK + ++K PG S++
Sbjct: 425 LELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVM 483
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 244/505 (48%), Gaps = 69/505 (13%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNT 100
L + C + L Q+H + D L +A R+ +P+
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDA 70
Query: 101 FMWNTLIRA---QRHPQTALSLYITMRRHG-ALPGKHTFPFLLKACSSLTPALPVHKQVH 156
FM+NTL+R P ++++++ M R G P +F F++KA + +L Q+H
Sbjct: 71 FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFR-SLRTGFQMH 129
Query: 157 AHVLKFGLGLDSHVANGLVRCYSVSG-------------------------------DLV 185
LK GL V L+ Y G D+
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 186 DARFVFDEIPSRSLSLWTTMVCGY-------------------------------AQNFC 214
AR +FD++ R+ + W M+ GY A N
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 215 SNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSA 274
NE+ F + G PN +L VLSAC++SG E G+ +H F+ G V + +A
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 275 LVNMYAKNGAIAMARKLFDGMPE-RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
L++MY++ G + MAR +F+GM E R +V+W MI GLA HG E+A+ LF M GV
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV-T 368
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
P+ ++FI +L AC H GL++ G D F MK VY IEP+IEHYGCMVDL GR GKL +A +
Sbjct: 369 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 428
Query: 394 LIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGE 453
I MP P ++ LL A + GN E+A+ V + + L+P+N G V LSN YA AG+
Sbjct: 429 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGK 488
Query: 454 WQDVLRLRKTMKEERLKKVPGWSLV 478
W+DV +RK+M +R+KK WSLV
Sbjct: 489 WKDVASIRKSMIVQRIKKTTAWSLV 513
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 248/452 (54%), Gaps = 8/452 (1%)
Query: 30 ITRQDPPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHAS 89
+ Q+P +L KC ++ +L Q+ A + + + +++A
Sbjct: 27 VNTQNP---ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYAR 83
Query: 90 RIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKACSSLT 146
+F ++ +P+ ++N++ R +P SL++ + G LP +TFP LLKAC+ +
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA-VA 142
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
AL +Q+H +K GL + +V L+ Y+ D+ AR VFD I + + M+
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 202
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
GYA+ NEAL+LF M + +PN TL SVLS+CA G L+LG+ IH++ +
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
V + +AL++M+AK G++ A +F+ M ++ W+ MI A HG E ++ +FE M
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
E V P+++TF+G+L+AC H G ++ GR F M + +GI P I+HYG MVDLL R G
Sbjct: 323 RSENVQ-PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 387 KLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSN 446
L +A E I +P P ++ LL A + N ++A+ V+E I L+ + G +V LSN
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 447 MYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+YA +W+ V LRK MK+ + KVPG S +
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSI 473
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 247/460 (53%), Gaps = 15/460 (3%)
Query: 33 QDPPTLAVLADKCTTVEQLKQVHAQMVVTA--RFNDHXXXXXXXXXXXXXXXGDLTHASR 90
Q +L + + +C TV+Q+K H+ ++ R +AS
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 91 IFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITM---RRHGALPGKHTFPFLLKACSS 144
IF SI PN+F+++T+IR P L ++ M P TF FL+ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 145 LTPALPVHKQVHAHVLKFGLGL-DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
V KQ+H V+K G+ L DSHV G++R Y L+DAR VFDEIP + W
Sbjct: 129 -ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWD 187
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
++ GY + +E L +F M+ +G EP+ ++ + L+ACA+ G L G+ IHEF++ K
Sbjct: 188 VLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 264 G-VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
+E V +G+ALV+MYAK G I A ++F + RNV +W +I G A +G+ + A++
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTC 307
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
E +E+E P+ V +GVL+AC HGG L+ GR + +M+ Y I PK EHY C+VDL+
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 383 GRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN----H 438
R G+L +A LI+ MP KP + GALL + N E+ ++ + +L LE N
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 427
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
V LSN+Y + ++R +++ ++K PGWS++
Sbjct: 428 AALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVL 467
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 239/445 (53%), Gaps = 11/445 (2%)
Query: 40 VLADKCTTVEQLKQ---VHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIH 96
L KCT + L Q VHA ++ + H G L A ++F +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQS--IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 97 QPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHK 153
Q + W TLI P AL + M R G P + T ++KA ++ H
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH- 181
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
Q+H +K G + HV + L+ Y+ G + DA+ VFD + SR+ W ++ G+A+
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
+ +AL LF+GM+ +GF P+ + AS+ AC+ +G LE G+ +H +M G ++ G+
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
L++MYAK+G+I ARK+FD + +R+VV+WN ++ A HG ++A+ FE M + G+
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR- 360
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
PN+++F+ VL+AC H GLLD G + MK GI P+ HY +VDLLGR G L A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 394 LIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGE 453
I+ MP +P I ALL A + NTE+ E + L+PD+ G HV L N+YA G
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 454 WQDVLRLRKTMKEERLKKVPGWSLV 478
W D R+RK MKE +KK P S V
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWV 504
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 229/411 (55%), Gaps = 16/411 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G++ + R+F I Q N W +LI A+ + M+ +G + LL
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSH----------VANGLVRCYSVSGDLVDARF 189
AC + K H + GLG D + +A L+ Y+ GDL AR+
Sbjct: 216 VACGRCKD-IVTGKWFHGFLQ--GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARY 272
Query: 190 VFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGC 249
+FD +P R+L W +++ GY+QN + EAL +F M+ G P+ T SV+ A GC
Sbjct: 273 LFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGC 332
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
+LG+ IH ++ G + ALVNMYAK G A+K F+ + +++ + W +I G
Sbjct: 333 SQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
LA+HGH +ALS+F+ M+++G A P+ +T++GVL AC H GL++ G+ F M+ ++G+E
Sbjct: 393 LASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE 452
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE 429
P +EHYGCMVD+L R G+ EA+ L+K MP KP+V I GALL N E+ +
Sbjct: 453 PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSM 512
Query: 430 ILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVTT 480
+ E G++V LSN+YA+AG W DV +R++MK +R+ KV G S V T
Sbjct: 513 VAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 226/480 (47%), Gaps = 57/480 (11%)
Query: 36 PTLAVLADKCTTVEQLKQVHAQMVVTARF-NDHXXXXXXXXXXXXXXXGDLTHASRIFSS 94
P L+ L + C ++ +L Q+H M+ ++ N +L++A +F S
Sbjct: 8 PILSQL-ENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 95 IHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
I P+ ++WN++IR + P AL Y M R G P TFP++LKACS L +
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRD-IQF 125
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQ 211
VH V+K G ++ +V+ L+ Y G++ VF++IP ++ W +++ G+
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 212 NFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG------- 264
N ++A+ F M + G + N + +L AC R + G+ H F++ G
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS 245
Query: 265 -VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
V VIL ++L++MYAK G + AR LFDGMPER +V+WN +I G + +G E+AL +F
Sbjct: 246 KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRD---------------VFCSMKTVYGI 368
+M G+A P+ VTF+ V+ A G +G+ + C++ +Y
Sbjct: 306 LDMLDLGIA-PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAK 364
Query: 369 EPKIEH---------------YGCMVDLLGRGGKLLEAKELIKGMPWK----PDVVILGA 409
E + ++ L G EA + + M K PD +
Sbjct: 365 TGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424
Query: 410 LLEASKNIGNTEVAKVVTEEIL---ALEP--DNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
+L A +IG E + E+ LEP +++G V ++ + AG +++ RL KTM
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMV---DILSRAGRFEEAERLVKTM 481
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 152/321 (47%), Gaps = 24/321 (7%)
Query: 132 KHTFPFL--LKACSSLTPALPVHK-QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDAR 188
KH P L L+ C SL +H + + V++ + L S + + C + +L AR
Sbjct: 4 KHYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPL-SRLIDFCTTC-PETMNLSYAR 61
Query: 189 FVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSG 248
VF+ I S+ +W +M+ GY+ + ++AL ++ M+ +G+ P+ T VL AC+
Sbjct: 62 SVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLR 121
Query: 249 CLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMIC 308
++ G +H F+ G EV + + + L++MY G + ++F+ +P+ NVV W +I
Sbjct: 122 DIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLIS 181
Query: 309 GLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC--C---------HGGLLDVGRD 357
G + DA+ F M+ GV N+ + +L AC C HG L +G D
Sbjct: 182 GFVNNNRFSDAIEAFREMQSNGVKA-NETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFD 240
Query: 358 VFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNI 417
+ K + + ++D+ + G L A+ L GMP + +V +++
Sbjct: 241 PYFQSKVGFNVILATS----LIDMYAKCGDLRTARYLFDGMPERT-LVSWNSIITGYSQN 295
Query: 418 GNTEVAKVVTEEILAL--EPD 436
G+ E A + ++L L PD
Sbjct: 296 GDAEEALCMFLDMLDLGIAPD 316
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/307 (44%), Positives = 198/307 (64%), Gaps = 1/307 (0%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N ++ Y+ G + +A+ +FD++P R W M+ GY+Q+ S EAL LF M EG
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
N ++ +S LS CA LELG+++H + G E G +G+AL+ MY K G+I A L
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
F M +++V+WN MI G + HG E AL FE+M++EG+ P+D T + VLSAC H GL
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK-PDDATMVAVLSACSHTGL 525
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+D GR F +M YG+ P +HY CMVDLLGR G L +A L+K MP++PD I G LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 412 EASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKK 471
AS+ GNTE+A+ ++I A+EP+N G++V LSN+YA +G W DV +LR M+++ +KK
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 472 VPGWSLV 478
VPG+S +
Sbjct: 646 VPGYSWI 652
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 12/243 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
G ++ A +F + + + W +I H AL L++ M R G + +F L
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C+ + AL + KQ+H ++K G V N L+ Y G + +A +F E+ + +
Sbjct: 417 STCADVV-ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W TM+ GY+++ AL FE M EG +P+ AT+ +VLSAC+ +G ++ G ++
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG---RQY 532
Query: 260 MRVKGVEVGVILGSA----LVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHG 314
+ GV+ S +V++ + G + A L MP E + W ++ HG
Sbjct: 533 FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Query: 315 HVE 317
+ E
Sbjct: 593 NTE 595
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 32/315 (10%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N +++ Y + +L AR +F+ +P R + W TM+ GYAQN C ++A ++F+ M E
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----E 185
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG-SALVNMYAKNGAIAMARK 290
N + ++LSA ++ +E M K E ++ + L+ + K I AR+
Sbjct: 186 KNDVSWNALLSAYVQNSKME-----EACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
FD M R+VV+WN +I G A G +++A LF+ V + T+ ++S
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-----SPVQDVFTWTAMVSGYIQNR 295
Query: 351 LLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGAL 410
+++ R++F M E + M+ +G ++ AKEL MP + +V +
Sbjct: 296 MVEEARELFDKMP-----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTM 349
Query: 411 LEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNM---YAEAGEWQDVLRLRKTMKEE 467
+ G AK + +++ +P VS + M Y+++G + LRL M+ E
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDP------VSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 468 --RLKKVPGWSLVTT 480
RL + S ++T
Sbjct: 404 GGRLNRSSFSSALST 418
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 23/230 (10%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLA--SVLSACARSGCLELGERIHEF 259
W + Y + NEAL +F+ M P ++++ ++S R+G EL ++ +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
M E ++ + ++ Y +N + AR+LF+ MPER+V +WN M+ G A +G V+DA
Sbjct: 121 M----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
S+F+ M ++ NDV++ +LSA ++ +F S + + + C++
Sbjct: 177 RSVFDRMPEK-----NDVSWNALLSAYVQNSKMEEACMLFKSRENW-----ALVSWNCLL 226
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE 429
+ K++EA++ M + DVV ++ G + A+ + +E
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDE 275
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/536 (33%), Positives = 268/536 (50%), Gaps = 106/536 (19%)
Query: 44 KCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTH-ASRIFSSIHQPNTFM 102
KC + Q+KQ+HAQ++ R N H T+ A R+F+ + +PN +
Sbjct: 28 KCANLNQVKQLHAQII---RRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHL 84
Query: 103 WNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
N+LIRA P A ++ M+R G T+PFLLKACS + LPV K +H H+
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS-WLPVVKMMHNHI 143
Query: 160 LKFGLGLDSHVANGLVRCYS---------------------------------VSGDLVD 186
K GL D +V N L+ CYS +G+L D
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 203
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM----------VAEGFEPNG-- 234
AR +FDE+P R L W TM+ GYA+ ++A LFE M + G+ G
Sbjct: 204 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 263
Query: 235 -----------------ATLASVLSACARSGCLELGERIHEFMRVKGV------------ 265
T +++ A G L+ +R+ + M G+
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 266 ---EVGVI--------------LGS------ALVNMYAKNGAIAMARKLFDGMPERNVVT 302
E G++ LGS AL++MYAK G + A +F+ +P++++V+
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 303 WNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM 362
WN M+ GL HGH ++A+ LF M +EG+ P+ VTFI VL +C H GL+D G D F SM
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIR-PDKVTFIAVLCSCNHAGLIDEGIDYFYSM 442
Query: 363 KTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEV 422
+ VY + P++EHYGC+VDLLGR G+L EA ++++ MP +P+VVI GALL A + ++
Sbjct: 443 EKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDI 502
Query: 423 AKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
AK V + ++ L+P + G + LSN+YA A +W+ V +R MK ++K G S V
Sbjct: 503 AKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSV 558
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 145/334 (43%), Gaps = 49/334 (14%)
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L C++L KQ+HA +++ L D H+A L+ S+ A VF+++ +
Sbjct: 26 LPKCANLNQV----KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPN 81
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ L +++ +AQN +A +F M G + T +L AC+ L + + +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAM--ARKLFDGMPERNVVTWNGMICGLATHGHV 316
+ G+ + + +AL++ Y++ G + + A KLF+ M ER+ V+WN M+ GL G +
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
DA LF+ M + RD+ +
Sbjct: 202 RDARRLFDEMPQ---------------------------RDLIS--------------WN 220
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
M+D R ++ +A EL + MP + + V ++ G+ E+A+V+ ++ + L
Sbjct: 221 TMLDGYARCREMSKAFELFEKMPER-NTVSWSTMVMGYSKAGDMEMARVMFDK-MPLPAK 278
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
N + YAE G ++ RL M LK
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 234/397 (58%), Gaps = 10/397 (2%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKA 141
L A ++F + Q N W T+I A + Q AL L + M R P +T+ +L++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
C+ ++ + +H ++K GL D V + L+ ++ G+ DA VFDE+ + +
Sbjct: 172 CNGMSDV----RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W +++ G+AQN S+ AL LF+ M GF ATL SVL AC LELG + H +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH--VH 285
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
+ + +IL +ALV+MY K G++ A ++F+ M ER+V+TW+ MI GLA +G+ ++AL
Sbjct: 286 IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
LFE M+ G PN +T +GVL AC H GLL+ G F SMK +YGI+P EHYGCM+DL
Sbjct: 346 LFERMKSSGTK-PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVH 441
LG+ GKL +A +L+ M +PD V LL A + N +A+ ++++AL+P++ G +
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTY 464
Query: 442 VSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LSN+YA + +W V +R M++ +KK PG S +
Sbjct: 465 TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 152/339 (44%), Gaps = 9/339 (2%)
Query: 92 FSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
+SS Q T + QR A+ +++ HG T+ L+K C S A+
Sbjct: 21 YSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCIS-NRAVHE 79
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQ 211
+ H+ G + N L+ Y L DA +FD++P R++ WTTM+ Y++
Sbjct: 80 GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139
Query: 212 NFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVIL 271
+AL L M+ + PN T +SVL +C + + +H + +G+E V +
Sbjct: 140 CKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFV 196
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
SAL++++AK G A +FD M + + WN +I G A + + AL LF+ M++ G
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
+ T VL AC LL++G + + + +VD+ + G L +A
Sbjct: 257 -IAEQATLTSVLRACTGLALLELGMQAHVH---IVKYDQDLILNNALVDMYCKCGSLEDA 312
Query: 392 KELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ M + DV+ ++ G ++ A + E +
Sbjct: 313 LRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFERM 350
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 255/507 (50%), Gaps = 71/507 (14%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNT 100
L C + LKQ+HA MVV ++ G L +A ++F I +P+
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 101 FMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSL---TPALPVHKQ 154
+ N ++R P+ +SLY M + G P ++TF F+LKACS L + H +
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 155 V--HAHVLKF--------------GLGLDSHVANGLVRCYSVS-----------GDLVDA 187
V H VL LG+ S + + + + V+ G + +A
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 188 RFVFDEIP-------------------------------SRSLSLWTTMVCGYAQNFCSN 216
+FDE+P + + W M+ GY
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR-----VKGVEVGVIL 271
EAL +F+ M G P+ T+ S+LSACA G LE G+R+H ++ + VG +
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+AL++MYAK G+I A ++F G+ +R++ TWN +I GLA H H E ++ +FE M++ V
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKV 376
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
PN+VTFIGV+ AC H G +D GR F M+ +Y IEP I+HYGCMVD+LGR G+L EA
Sbjct: 377 W-PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEA 435
Query: 392 KELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEA 451
++ M +P+ ++ LL A K GN E+ K E++L++ D G +V LSN+YA
Sbjct: 436 FMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYAST 495
Query: 452 GEWQDVLRLRKTMKEERLKKVPGWSLV 478
G+W V ++RK + R+KK G SL+
Sbjct: 496 GQWDGVQKVRKMFDDTRVKKPTGVSLI 522
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 210/324 (64%)
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
+H+ V++ G G +V N L+ Y+ GD+ A VFD++P + L W +++ G+A+N
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 215 SNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSA 274
EALAL+ M ++G +P+G T+ S+LSACA+ G L LG+R+H +M G+ + +
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVP 334
L+++YA+ G + A+ LFD M ++N V+W +I GLA +G ++A+ LF+ ME +P
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 189
Query: 335 NDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL 394
++TF+G+L AC H G++ G + F M+ Y IEP+IEH+GCMVDLL R G++ +A E
Sbjct: 190 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 249
Query: 395 IKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEW 454
IK MP +P+VVI LL A G++++A+ +IL LEP++ G +V LSNMYA W
Sbjct: 250 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 309
Query: 455 QDVLRLRKTMKEERLKKVPGWSLV 478
DV ++RK M + +KKVPG SLV
Sbjct: 310 SDVQKIRKQMLRDGVKKVPGHSLV 333
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ A ++F + + + WN++I P+ AL+LY M G P T LL
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC+ + AL + K+VH +++K GL + H +N L+ Y+ G + +A+ +FDE+ ++
Sbjct: 97 SACAKIG-ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACARSGCLELGERIHE 258
WT+++ G A N EA+ LF+ M + EG P T +L AC+ G ++ G
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 259 FMRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHG 314
MR + +E + +V++ A+ G + A + MP + NVV W ++ HG
Sbjct: 216 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
+ LGE IH + G + + ++L+++YA G +A A K+FD MPE+++V WN +I G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
A +G E+AL+L+ M +G+ P+ T + +LSAC G L +G+ V M V G+
Sbjct: 64 FAENGKPEEALALYTEMNSKGIK-PDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLT 121
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDV 404
+ ++DL R G++ EAK L M K V
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 233/430 (54%), Gaps = 36/430 (8%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ +A ++F + WN LI + + A+ +Y M G P T L+
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+CS L L K+ + +V + GL + + N L+ +S GD+ +AR +FD + R++
Sbjct: 265 SSCSMLGD-LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Query: 200 SLWTTMVCGYA-------------------------------QNFCSNEALALFEGMVAE 228
WTTM+ GYA Q +ALALF+ M
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS 383
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
+P+ T+ LSAC++ G L++G IH ++ + + V LG++LV+MYAK G I+ A
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
+F G+ RN +T+ +I GLA HG A+S F M G+A P+++TFIG+LSACCH
Sbjct: 444 LSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA-PDEITFIGLLSACCH 502
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
GG++ GRD F MK+ + + P+++HY MVDLLGR G L EA L++ MP + D + G
Sbjct: 503 GGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWG 562
Query: 409 ALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEER 468
ALL + GN E+ + +++L L+P + G++V L MY EA W+D R R+ M E
Sbjct: 563 ALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERG 622
Query: 469 LKKVPGWSLV 478
++K+PG S +
Sbjct: 623 VEKIPGCSSI 632
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 204/414 (49%), Gaps = 42/414 (10%)
Query: 36 PTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSI 95
P L++L +KC + LKQ+ AQM++ D L ++ +I I
Sbjct: 55 PLLSLL-EKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113
Query: 96 HQPNTFMWNTLIRA---QRHPQTALSLYITMRRHG---ALPGKHTFPFLLKACSSLTPAL 149
PN F WN IR +P+ + LY M RHG + P T+P L K C+ L +
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGY 209
H + HVLK L L SHV N + ++ GD+ +AR VFDE P R L W ++ GY
Sbjct: 174 LGH-MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
+ + +A+ +++ M +EG +P+ T+ ++S+C+ G L G+ +E+++ G+ + +
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE 329
L +AL++M++K G I AR++FD + +R +V+W MI G A G ++ + LF++ME++
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 330 GVAV------------------------------PNDVTFIGVLSACCHGGLLDVGRDVF 359
V + P+++T I LSAC G LDVG +
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV---ILGAL 410
++ Y + + +VD+ + G + EA + G+ + + I+G L
Sbjct: 413 RYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGL 465
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 240/444 (54%), Gaps = 8/444 (1%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXX--XGDLTHASRIFSSIHQP 98
L +C +++ KQVHA+ + + F + +A+ IF I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 99 NTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQV 155
TF +NT+IR + + AL Y M + G P T+P LLKAC+ L ++ KQ+
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRL-KSIREGKQI 154
Query: 156 HAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS 215
H V K GL D V N L+ Y G++ + VF+++ S++ + W++MV A
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 216 NEALALFEGMVAE-GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSA 274
+E L LF GM +E + + + S L ACA +G L LG IH F+ E+ +I+ ++
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVP 334
LV+MY K G + A +F M +RN +T++ MI GLA HG E AL +F M KEG+ P
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE-P 333
Query: 335 NDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL 394
+ V ++ VL+AC H GL+ GR VF M +EP EHYGC+VDLLGR G L EA E
Sbjct: 334 DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALET 393
Query: 395 IKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEW 454
I+ +P + + VI L + N E+ ++ +E+L L N G ++ +SN+Y++ W
Sbjct: 394 IQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMW 453
Query: 455 QDVLRLRKTMKEERLKKVPGWSLV 478
DV R R + + LK+ PG+S+V
Sbjct: 454 DDVARTRTEIAIKGLKQTPGFSIV 477
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 258/477 (54%), Gaps = 40/477 (8%)
Query: 39 AVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQP 98
++L +C ++ +L ++H ++ + GD+ +A + S + P
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 99 NTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQV 155
+ WN +IR R+P+ ++S+YI M R G LP T+PFL+K+ S L+ + +
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR-KLGGSL 130
Query: 156 HAHVLKFGLGLDSHVANGLVR-------------------------------CYSVSGDL 184
H V+K GL D + N L+ Y+ SGD+
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 185 VDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGF-EPNGATLASVLSA 243
V AR VFDE+ R + W++M+ GY + N+AL +F+ M+ G + N T+ SV+ A
Sbjct: 191 VSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICA 250
Query: 244 CARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF--DGMPERNVV 301
CA G L G+ +H ++ + + VIL ++L++MYAK G+I A +F + E + +
Sbjct: 251 CAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
WN +I GLA+HG + ++L LF M +E P+++TF+ +L+AC HGGL+ F S
Sbjct: 311 MWNAIIGGLASHGFIRESLQLFHKM-RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKS 369
Query: 362 MKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTE 421
+K G EPK EHY CMVD+L R G + +A + I MP KP +LGALL N GN E
Sbjct: 370 LKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLE 428
Query: 422 VAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+A+ V ++++ L+P N G +V L+N+YA +++ +R+ M+++ +KK+ G S++
Sbjct: 429 LAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSIL 485
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 42/263 (15%)
Query: 138 LLKACSSLTPALPVHKQVHA-------HVLKFGLGL---DSHVANGL-VRCYSVSGDLVD 186
+LK+ SSL + Q + H L LGL + V+ L S SGD+
Sbjct: 1 MLKSSSSLVAKSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDY 60
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACAR 246
A ++ W ++ G++ + ++++++ M+ G P+ T ++ + +R
Sbjct: 61 AYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSR 120
Query: 247 SGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWN-- 304
+LG +H + G+E + + + L++MY A ARKLFD MP +N+VTWN
Sbjct: 121 LSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSI 180
Query: 305 -----------------------------GMICGLATHGHVEDALSLFENMEKEGVAVPN 335
MI G G AL +F+ M + G + N
Sbjct: 181 LDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 240
Query: 336 DVTFIGVLSACCHGGLLDVGRDV 358
+VT + V+ AC H G L+ G+ V
Sbjct: 241 EVTMVSVICACAHLGALNRGKTV 263
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 234/401 (58%), Gaps = 7/401 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G + +A ++F I + WN +I + AL L+ M + P + T ++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC+ + ++ + +QVH + G G + + N L+ YS G+L A +F+ +P + +
Sbjct: 274 SACAQ-SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W T++ GY EAL LF+ M+ G PN T+ S+L ACA G +++G IH +
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 260 M--RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ R+KGV L ++L++MYAK G I A ++F+ + +++ +WN MI G A HG +
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+ LF M K G+ P+D+TF+G+LSAC H G+LD+GR +F +M Y + PK+EHYGC
Sbjct: 453 ASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
M+DLLG G EA+E+I M +PD VI +LL+A K GN E+ + E ++ +EP+N
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G +V LSN+YA AG W +V + R + ++ +KKVPG S +
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 206/402 (51%), Gaps = 39/402 (9%)
Query: 33 QDPPTLAVLADKCTTVEQLKQVHAQMVVTARFN-DHXXXXXXXXXXXXXXXGDLTHASRI 91
++ P+L++L + C T++ L+ +HAQM+ N ++ L +A +
Sbjct: 32 RNHPSLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISV 90
Query: 92 FSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPA 148
F +I +PN +WNT+ R P +AL LY+ M G LP +TFPF+LK+C+ + A
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK-SKA 149
Query: 149 LPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD---------------- 192
+Q+H HVLK G LD +V L+ Y +G L DA VFD
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 193 ---------------EIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATL 237
EIP + + W M+ GYA+ EAL LF+ M+ P+ +T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 238 ASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPE 297
+V+SACA+SG +ELG ++H ++ G + + +AL+++Y+K G + A LF+ +P
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 298 RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRD 357
++V++WN +I G ++AL LF+ M + G PNDVT + +L AC H G +D+GR
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 358 VFCSM-KTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
+ + K + G+ ++D+ + G + A ++ +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 222/397 (55%), Gaps = 4/397 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA-QRHPQTALSLYITMRRHGALPGKHTFPFLLKA 141
G + S +F +P+ +N +I + +T LSL ++ + L G L +
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL--SLFKELMLSGARLRSSTLVS 327
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
++ L + +H + LK + V+ L YS ++ AR +FDE P +SL
Sbjct: 328 LVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W M+ GY QN + +A++LF M F PN T+ +LSACA+ G L LG+ +H+ +R
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
E + + +AL+ MYAK G+IA AR+LFD M ++N VTWN MI G HG ++AL+
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
+F M G+ P VTF+ VL AC H GL+ G ++F SM YG EP ++HY CMVD+
Sbjct: 508 IFYEMLNSGI-TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVH 441
LGR G L A + I+ M +P + LL A + +T +A+ V+E++ L+PDN G H
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYH 626
Query: 442 VSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
V LSN+++ + +R+T K+ +L K PG++L+
Sbjct: 627 VLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 10/322 (3%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMR----RHGALPGKHTFPFLLKACS 143
A ++F + + +T +WNT+I R + + R T +L A +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
L L + Q+H+ K G +V G + YS G + +F E + +
Sbjct: 233 ELQE-LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
M+ GY N + +L+LF+ ++ G +TL S++ SG L L IH +
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKS 348
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
+ +AL +Y+K I ARKLFD PE+++ +WN MI G +G EDA+SLF
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
M+K + PN VT +LSAC G L +G+ V +++ E I ++ +
Sbjct: 409 REMQKSEFS-PNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYA 466
Query: 384 RGGKLLEAKELIKGMPWKPDVV 405
+ G + EA+ L M K +V
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVT 488
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 7/306 (2%)
Query: 127 GALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD 186
AL K+T+ K +S++ Q HA ++ G D + L + S G +
Sbjct: 15 AALISKNTYLDFFKRSTSISHL----AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYY 70
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM-VAEGFEPNGATLASVLSACA 245
AR +F + + L+ ++ G++ N + +L++F + + +PN +T A +SA +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 246 RSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNG 305
G IH V G + ++LGS +V MY K + ARK+FD MPE++ + WN
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 306 MICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTV 365
MI G + +++ +F ++ E + T + +L A L +G + S+ T
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH-SLATK 249
Query: 366 YGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKV 425
G + L + GK+ L + KPD+V A++ + G TE++
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETELSLS 308
Query: 426 VTEEIL 431
+ +E++
Sbjct: 309 LFKELM 314
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 234/400 (58%), Gaps = 9/400 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
G + +A ++F + ++WN L RA H + L LY M R G + T+ ++L
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 140 KACSS---LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
KAC + L K++HAH+ + G ++ LV Y+ G + A +VF +P
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE--PNGATLASVLSACARSGCLELGE 254
R++ W+ M+ YA+N + EAL F M+ E + PN T+ SVL ACA LE G+
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
IH ++ +G++ + + SALV MY + G + + +++FD M +R+VV+WN +I HG
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH 374
+ + A+ +FE M G A P VTF+ VL AC H GL++ G+ +F +M +GI+P+IEH
Sbjct: 366 YGKKAIQIFEEMLANG-ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 375 YGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
Y CMVDLLGR +L EA ++++ M +P + G+LL + + GN E+A+ + + ALE
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 435 PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPG 474
P N G +V L+++YAEA W +V R++K ++ L+K+PG
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 150/313 (47%), Gaps = 18/313 (5%)
Query: 130 PGKHTFPFLLKAC---SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD 186
P + T+ L+ C SSL+ AL VH+ H+L G D +A L+ YS G +
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHR----HILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACAR 246
AR VFD+ R++ +W + E L L+ M G E + T VL AC
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 247 SGC----LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVT 302
S C L G+ IH + +G V + + LV+MYA+ G + A +F GMP RNVV+
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 303 WNGMICGLATHGHVEDALSLFENMEKEGV-AVPNDVTFIGVLSACCHGGLLDVGRDV--F 359
W+ MI A +G +AL F M +E + PN VT + VL AC L+ G+ + +
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN 419
+ + I P I +V + GR GKL + + M + DVV +L+ + G
Sbjct: 311 ILRRGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRMHDR-DVVSWNSLISSYGVHGY 366
Query: 420 TEVAKVVTEEILA 432
+ A + EE+LA
Sbjct: 367 GKKAIQIFEEMLA 379
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 7/238 (2%)
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI 270
Q+ C L ++++ P+ T ++ C L R+H + G +
Sbjct: 54 QSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPF 113
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
L + L+ MY+ G++ ARK+FD +R + WN + L GH E+ L L+ M + G
Sbjct: 114 LATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG 173
Query: 331 VAVPNDVTFIGVLSAC----CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
V + T+ VL AC C L G+++ + T G + +VD+ R G
Sbjct: 174 VE-SDRFTYTYVLKACVASECTVNHLMKGKEIHAHL-TRRGYSSHVYIMTTLVDMYARFG 231
Query: 387 KLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSL 444
+ A + GMP + +VV A++ G A E++ D+ V++
Sbjct: 232 CVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 251/477 (52%), Gaps = 39/477 (8%)
Query: 38 LAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQ 97
L ++ +C+T+ +LKQ+HA ++ T +D D+ +A +F+ I+
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISD-TVTASRVLAFCCASPSDMNYAYLVFTRINH 86
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITM--RRHGALPGKHTFPFLLKACSSLTPALPVH 152
N F+WNT+IR P+ A+S++I M P + T+P + KA L A
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARD-G 145
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD-------------------------- 186
+Q+H V+K GL DS + N ++ Y G L++
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 187 -----ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVL 241
A+ +FDE+P R+ W +M+ G+ +N +AL +F M + +P+G T+ S+L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 242 SACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVV 301
+ACA G E G IHE++ E+ I+ +AL++MY K G I +F+ P++ +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
WN MI GLA +G E A+ LF +E+ G+ P+ V+FIGVL+AC H G + + F
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELERSGLE-PDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 362 MKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTE 421
MK Y IEP I+HY MV++LG G L EA+ LIK MP + D VI +LL A + IGN E
Sbjct: 385 MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVE 444
Query: 422 VAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+AK + + L+PD +V LSN YA G +++ + R MKE +++K G S +
Sbjct: 445 MAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 123 MRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANG-LVRCYSVS 181
M G+L G + CS++ KQ+HA ++K GL D+ A+ L C +
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMREL----KQIHASLIKTGLISDTVTASRVLAFCCASP 71
Query: 182 GDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV--AEGFEPNGATLAS 239
D+ A VF I ++ +W T++ G++++ A+++F M+ + +P T S
Sbjct: 72 SDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPS 131
Query: 240 VLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN 299
V A R G G ++H + +G+E + + +++MY G + A ++F GM +
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD 191
Query: 300 VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF 359
VV WN MI G A G ++ A +LF+ M + N V++ ++S G D+F
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQR-----NGVSWNSMISGFVRNGRFKDALDMF 246
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN 419
+ ++ K++ KPD + +LL A +G
Sbjct: 247 ---------------------------REMQEKDV------KPDGFTMVSLLNACAYLGA 273
Query: 420 TEVAKVVTEEILALEPD-NHGVHVSLSNMYAEAG 452
+E + + E I+ + N V +L +MY + G
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 232/434 (53%), Gaps = 40/434 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA--QR-HPQTALSLYITMRRHGAL-PGKHTFPFL 138
G + A F + + + WN++I QR + AL ++ M R L P + T +
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG---------------- 182
L AC++L L + KQ+H+H++ G + V N L+ YS G
Sbjct: 286 LSACANL-EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 183 -----------------DLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM 225
D+ A+ +F + R + WT M+ GY Q+ EA+ LF M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
V G PN TLA++LS + L G++IH G V + +AL+ MYAK G I
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 286 AMARKLFDGMP-ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLS 344
A + FD + ER+ V+W MI LA HGH E+AL LFE M EG+ P+ +T++GV S
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR-PDHITYVGVFS 523
Query: 345 ACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDV 404
AC H GL++ GR F MK V I P + HY CMVDL GR G L EA+E I+ MP +PDV
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
Query: 405 VILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
V G+LL A + N ++ KV E +L LEP+N G + +L+N+Y+ G+W++ ++RK+M
Sbjct: 584 VTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Query: 465 KEERLKKVPGWSLV 478
K+ R+KK G+S +
Sbjct: 644 KDGRVKKEQGFSWI 657
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 154/326 (47%), Gaps = 38/326 (11%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N ++ YS GD+ FD++P R WTTM+ GY ++A+ + MV EG E
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
P TL +VL++ A + C+E G+++H F+ G+ V + ++L+NMYAK G MA+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 292 FD-------------------------------GMPERNVVTWNGMICGLATHGHVEDAL 320
FD M ER++VTWN MI G G+ AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+F M ++ + P+ T VLSAC + L +G+ + + T G + ++
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-GFDISGIVLNALIS 322
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILG--ALLEASKNIGNTEVAKVVTEEILALEPDNH 438
+ R G + A+ LI+ K D+ I G ALL+ +G+ AK + ++L+ +
Sbjct: 323 MYSRCGGVETARRLIEQRGTK-DLKIEGFTALLDGYIKLGDMNQAKNI---FVSLKDRDV 378
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTM 464
++ Y + G + + + L ++M
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSM 404
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 187/443 (42%), Gaps = 80/443 (18%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ F + Q ++ W T+I ++ A+ + M + G P + T +L
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ ++ T + K+VH+ ++K GL + V+N L+ Y+ GD + A+FVFD + R +
Sbjct: 154 ASVAA-TRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 200 S-------------------------------LWTTMVCGYAQNFCSNEALALFEGMVAE 228
S W +M+ G+ Q AL +F M+ +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 229 G-FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
P+ TLASVLSACA L +G++IH + G ++ I+ +AL++MY++ G +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 288 ARKL---------------------------------FDGMPERNVVTWNGMICGLATHG 314
AR+L F + +R+VV W MI G HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS-MKT--VYGIEPK 371
+A++LF +M G PN T +LS L G+ + S +K+ +Y +
Sbjct: 393 SYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 372 IEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL 431
++ + + G + A + + D V +++ A G+ E A + E +L
Sbjct: 452 ----NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 432 --ALEPDNHGVHVSLSNMYAEAG 452
L PD H +V + + AG
Sbjct: 508 MEGLRPD-HITYVGVFSACTHAG 529
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 233/437 (53%), Gaps = 43/437 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA--QRHPQT-ALSLYITMRRHGALPGKHTFPFLL 139
G++ A R+F + N WN+LI Q P AL ++ M P + T ++
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 140 KACSSLTPALPVHKQVHAHVLKFG-LGLDSHVANGLVRCYSVSGDLVDARFVFDEIP--- 195
AC+SL+ A+ V ++VH V+K L D ++N V Y+ + +ARF+FD +P
Sbjct: 261 SACASLS-AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 196 ----------------------------SRSLSLWTTMVCGYAQNFCSNEALALFEGMVA 227
R++ W ++ GY QN + EAL+LF +
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIH------EFMRVKGVEVGVILGSALVNMYAK 281
E P + A++L ACA L LG + H F G E + +G++L++MY K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 282 NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIG 341
G + +F M ER+ V+WN MI G A +G+ +AL LF M + G P+ +T IG
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESG-EKPDHITMIG 498
Query: 342 VLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK 401
VLSAC H G ++ GR F SM +G+ P +HY CMVDLLGR G L EAK +I+ MP +
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 402 PDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLR 461
PD VI G+LL A K N + K V E++L +EP N G +V LSNMYAE G+W+DV+ +R
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 462 KTMKEERLKKVPGWSLV 478
K+M++E + K PG S +
Sbjct: 619 KSMRKEGVTKQPGCSWI 635
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 37/308 (12%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA-QRHP--QTALSLYITMRRHGALPGKHTFPFLL 139
G L A +F S+ + + WN+++ +H + AL + M + G + +++F +L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
ACS L + QVH+ + K D ++ + LV YS G++ DA+ VFDE+ R++
Sbjct: 160 SACSGLND-MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH-E 258
W +++ + QN + EAL +F+ M+ EP+ TLASV+SACA +++G+ +H
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP---------------------- 296
++ + +IL +A V+MYAK I AR +FD MP
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 297 ---------ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
ERNVV+WN +I G +G E+ALSLF +++E V P +F +L AC
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC-PTHYSFANILKACA 397
Query: 348 HGGLLDVG 355
L +G
Sbjct: 398 DLAELHLG 405
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 36/366 (9%)
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
F LL +C + + VHA V+K G + + N L+ YS G L D R VFD++
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 195 PSRSL-------------------------------SLWTTMVCGYAQNFCSNEALALFE 223
P R++ W +MV G+AQ+ EAL F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 224 GMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNG 283
M EGF N + ASVLSAC+ + G ++H + V +GSALV+MY+K G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 284 AIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
+ A+++FD M +RNVV+WN +I +G +AL +F+ M + V P++VT V+
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE-PDEVTLASVI 260
Query: 344 SACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPD 403
SAC + VG++V + + I VD+ + ++ EA+ + MP + +
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-N 319
Query: 404 VVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKT 463
V+ +++ +T+ A+++ + N +L Y + GE ++ L L
Sbjct: 320 VIAETSMISGYAMAASTKAARLM---FTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 464 MKEERL 469
+K E +
Sbjct: 377 LKRESV 382
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 66/230 (28%)
Query: 233 NGATLASVLSACARSGCLELGER-IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
+ + A +L +C +S + R +H + G + + + L++ Y+K G++ R++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 292 FDGMPERNVV-------------------------------TWNGMICGLATHGHVEDAL 320
FD MP+RN+ TWN M+ G A H E+AL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
F M KEG V N+ +F VLSAC GL D+ + V
Sbjct: 138 CYFAMMHKEGF-VLNEYSFASVLSAC--SGLNDMNKGV---------------------- 172
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ LI P+ DV I AL++ GN A+ V +E+
Sbjct: 173 ---------QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 251/510 (49%), Gaps = 72/510 (14%)
Query: 35 PPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSS 94
PP L + +C+T + L+ A M+ T+ D DL A +
Sbjct: 773 PPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDL--AVSTMTQ 830
Query: 95 IHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
+ +PN F++N L + HP +L LY+ M R P +T+ L+KA S A
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF---ASRF 887
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGY-- 209
+ + AH+ KFG G + L+ YS +G + +AR VFDE+P R WTTMV Y
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 210 -----AQNFCSN------------------------EALALFEGM----------VAEGF 230
+ N +N +A +LF M + +G+
Sbjct: 948 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 1007
Query: 231 EPNG---------------------ATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
N T+++V+SACA G LE+G+ +H + G + V
Sbjct: 1008 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV 1067
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE 329
+GSALV+MY+K G++ A +F +P++N+ WN +I GLA HG ++AL +F ME E
Sbjct: 1068 YIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME 1127
Query: 330 GVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLL 389
V PN VTF+ V +AC H GL+D GR ++ SM Y I +EHYG MV L + G +
Sbjct: 1128 SVK-PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 1186
Query: 390 EAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYA 449
EA ELI M ++P+ VI GALL+ + N +A++ +++ LEP N G + L +MYA
Sbjct: 1187 EALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 1246
Query: 450 EAGEWQDVLRLRKTMKEERLKKV-PGWSLV 478
E W+DV +R M+E ++K+ PG S +
Sbjct: 1247 EQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 236/427 (55%), Gaps = 36/427 (8%)
Query: 87 HASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKACS 143
+A+R+FS I PN ++N +I+ P +LS + +M+ G ++T+ LLK+CS
Sbjct: 54 YANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCS 113
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
SL+ L K VH +++ G + G+V Y+ G + DA+ VFDE+ R++ +W
Sbjct: 114 SLSD-LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 204 TMVCGYAQN-----------------------------FC--SNEALALFEGMVAEGFEP 232
M+ G+ + C EAL LF M+ +GF+P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI-LGSALVNMYAKNGAIAMARKL 291
+ AT+ +VL A G L+ G+ IH G+ I +G+ALV+ Y K+G + A +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
F M RNVV+WN +I G A +G E + LF+ M +EG PN+ TF+GVL+ C + G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
++ G ++F M + +E + EHYG MVDL+ R G++ EA + +K MP + + G+LL
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Query: 412 EASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKK 471
A ++ G+ ++A+V E++ +EP N G +V LSN+YAE G WQDV ++R MK+ RL+K
Sbjct: 413 SACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Query: 472 VPGWSLV 478
G S +
Sbjct: 473 STGQSTI 479
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 35/224 (15%)
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCY-SVSGDLVDARF---VFDEIPSRSLSLWTTMVCGY 209
++HAH+L+ L H +N L+ + S+ G L ++ + VF I + ++ ++ M+ Y
Sbjct: 22 EIHAHLLRHFL----HGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCY 77
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE------FMRVK 263
+ E+L+ F M + G + T A +L +C+ L G+ +H F R+
Sbjct: 78 SLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLG 137
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
+ +GV V +Y G + A+K+FD M ERNVV WN MI G G VE L LF
Sbjct: 138 KIRIGV------VELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLF 191
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRD-----VFCSM 362
+ M + + N + I LS C GRD +FC M
Sbjct: 192 KQMSERSIVSWN--SMISSLSKC--------GRDREALELFCEM 225
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 228/401 (56%), Gaps = 8/401 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G L A R+F I +P+T WN +I + A+S++ MR G +P + LL
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 140 KACSSLTP-ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
C+ P AL Q+H++++K+G D V N L+ Y+ DL +F++ + +
Sbjct: 379 --CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 436
Query: 199 LSL-WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
S+ W T++ Q+ E L LF+ M+ EP+ T+ ++L C L+LG ++H
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G+ + + L++MYAK G++ AR++FD M R+VV+W+ +I G A G E
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+AL LF+ M+ G+ PN VTF+GVL+AC H GL++ G ++ +M+T +GI P EH C
Sbjct: 557 EALILFKEMKSAGIE-PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSC 615
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
+VDLL R G+L EA+ I M +PDVV+ LL A K GN +A+ E IL ++P N
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFN 675
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
HV L +M+A +G W++ LR +MK+ +KK+PG S +
Sbjct: 676 STAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWI 716
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Query: 134 TFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
T+ L+ ACSS + +L +++H H+L D+ + N ++ Y G L DAR VFD
Sbjct: 69 TYISLICACSS-SRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+P R+L +T+++ GY+QN EA+ L+ M+ E P+ S++ ACA S + LG
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
+++H + +I +AL+ MY + ++ A ++F G+P +++++W+ +I G +
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV--FCSMKTVYGIEPK 371
G +ALS + M GV PN+ F L AC D G + C + G
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 372 IEHYGC-MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
GC + D+ R G L A+ + + +PD ++ N G + A V ++
Sbjct: 308 ----GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 10/269 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G L A +F + + N + ++I A+ LY+ M + +P + F ++
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHV--ANGLVRCYSVSGDLVDARFVFDEIPSR 197
KAC+S + + + KQ+HA V+K L SH+ N L+ Y + DA VF IP +
Sbjct: 176 KACAS-SSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK 232
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERI 256
L W++++ G++Q EAL+ + M++ G F PN S L AC+ + G +I
Sbjct: 233 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI 292
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H + I G +L +MYA+ G + AR++FD + + +WN +I GLA +G+
Sbjct: 293 HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYA 352
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSA 345
++A+S+F M G +P+ ++ +L A
Sbjct: 353 DEAVSVFSQMRSSGF-IPDAISLRSLLCA 380
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 187/424 (44%), Gaps = 16/424 (3%)
Query: 52 KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIRAQR 111
KQ+HAQ V+ + H ++ ASR+F I + W+++I
Sbjct: 188 KQLHAQ-VIKLESSSHLIAQNALIAMYVRF-NQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 112 H---PQTALSLYITMRRHGAL-PGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLD 167
ALS M G P ++ F LKACSSL Q+H +K L +
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP-DYGSQIHGLCIKSELAGN 304
Query: 168 SHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVA 227
+ L Y+ G L AR VFD+I + W ++ G A N ++EA+++F M +
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
GF P+ +L S+L A + L G +IH ++ G + + ++L+ MY +
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 288 ARKLF-DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
LF D + V+WN ++ H + L LF+ M P+ +T +L C
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE-PDHITMGNLLRGC 483
Query: 347 CHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
L +G V C S+KT G+ P+ ++D+ + G L +A+ + M + DVV
Sbjct: 484 VEISSLKLGSQVHCYSLKT--GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVV 540
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILA--LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKT 463
L+ G E A ++ +E+ + +EP NH V + + G ++ L+L T
Sbjct: 541 SWSTLIVGYAQSGFGEEALILFKEMKSAGIEP-NHVTFVGVLTACSHVGLVEEGLKLYAT 599
Query: 464 MKEE 467
M+ E
Sbjct: 600 MQTE 603
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 234/430 (54%), Gaps = 36/430 (8%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A +F + + F WN +I + + ++ L + M R+ P T +L
Sbjct: 184 GLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 140 KACSSLTPALPVHKQVHAHVLKF----GLGLDSHVANGLVRC------------------ 177
ACS + + K+VH +V + L L++ + N C
Sbjct: 244 SACSKVKDK-DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDV 302
Query: 178 ---------YSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAE 228
Y G+L AR FD++P R WT M+ GY + C NE+L +F M +
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
G P+ T+ SVL+ACA G LE+GE I ++ ++ V++G+AL++MY K G A
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKA 422
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
+K+F M +R+ TW M+ GLA +G ++A+ +F M+ + P+D+T++GVLSAC H
Sbjct: 423 QKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ-PDDITYLGVLSACNH 481
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
G++D R F M++ + IEP + HYGCMVD+LGR G + EA E+++ MP P+ ++ G
Sbjct: 482 SGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWG 541
Query: 409 ALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEER 468
ALL AS+ + +A++ ++IL LEPDN V+ L N+YA W+D+ +R+ + +
Sbjct: 542 ALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVA 601
Query: 469 LKKVPGWSLV 478
+KK PG+SL+
Sbjct: 602 IKKTPGFSLI 611
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 198/432 (45%), Gaps = 45/432 (10%)
Query: 45 CTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWN 104
C T +Q KQ+H+Q + + G +++A ++F I +P+ +WN
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 105 TLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLK 161
+I+ + LY+ M + G P HTFPFLL AL K++H HV+K
Sbjct: 104 NMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 162 FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALAL 221
FGLG + +V N LV+ YS+ G + AR VFD + W M+ GY + E++ L
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIEL 223
Query: 222 FEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYA- 280
M P TL VLSAC++ +L +R+HE++ E + L +ALVN YA
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAA 283
Query: 281 ------------------------------KNGAIAMARKLFDGMPERNVVTWNGMICGL 310
+ G + +AR FD MP R+ ++W MI G
Sbjct: 284 CGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGY 343
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
G ++L +F M+ G+ +P++ T + VL+AC H G L++G + Y +
Sbjct: 344 LRAGCFNESLEIFREMQSAGM-IPDEFTMVSVLTACAHLGSLEIGEWI-----KTYIDKN 397
Query: 371 KIEHY----GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVV 426
KI++ ++D+ + G +A+++ M + ++ + N E KV
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 427 TE-EILALEPDN 437
+ + ++++PD+
Sbjct: 458 FQMQDMSIQPDD 469
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 234/447 (52%), Gaps = 8/447 (1%)
Query: 35 PPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSS 94
PP K + + + KQ+H + ++D G+ +A ++F
Sbjct: 110 PPVFKACG-KFSGIREGKQIHGIVTKMGFYDD--IYVQNSLVHFYGVCGESRNACKVFGE 166
Query: 95 IHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
+ + W +I T + P T+ +L + S L + K
Sbjct: 167 MPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVS-SGRVGCLSLGKG 225
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
+H +LK + N L+ Y L DA VF E+ + W +M+ G
Sbjct: 226 IHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER 285
Query: 215 SNEALALFEGM-VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
S EA+ LF M + G +P+G L SVLSACA G ++ G +HE++ G++ +G+
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGT 345
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
A+V+MYAK G I A ++F+G+ +NV TWN ++ GLA HGH ++L FE M K G
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK- 404
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTV-YGIEPKIEHYGCMVDLLGRGGKLLEAK 392
PN VTF+ L+ACCH GL+D GR F MK+ Y + PK+EHYGCM+DLL R G L EA
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL 464
Query: 393 ELIKGMPWKPDVVILGALLEASKNIGN-TEVAKVVTEEILALEPDNHGVHVSLSNMYAEA 451
EL+K MP KPDV I GA+L A KN G E+ K + + L +E ++ GV+V LSN++A
Sbjct: 465 ELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAAN 524
Query: 452 GEWQDVLRLRKTMKEERLKKVPGWSLV 478
W DV R+R+ MK + + KVPG S +
Sbjct: 525 RRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 179/383 (46%), Gaps = 13/383 (3%)
Query: 34 DPPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDL-THASRIF 92
+ L L +C+++ KQ+ Q++ D D +++S I
Sbjct: 5 EKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKS--ADFASYSSVIL 62
Query: 93 SSIHQP-NTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPA 148
SI ++F +NTL+ + P+ + Y T +G P TFP + KAC +
Sbjct: 63 HSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFS-G 121
Query: 149 LPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCG 208
+ KQ+H V K G D +V N LV Y V G+ +A VF E+P R + WT ++ G
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 209 YAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
+ + EAL F M EPN AT VL + R GCL LG+ IH + + +
Sbjct: 182 FTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
+ G+AL++MY K ++ A ++F + +++ V+WN MI GL ++A+ LF M+
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKL 388
P+ VLSAC G +D GR V + T GI+ +VD+ + G +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYI 357
Query: 389 LEAKELIKGMPWKPDVVILGALL 411
A E+ G+ K +V ALL
Sbjct: 358 ETALEIFNGIRSK-NVFTWNALL 379
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 167/388 (43%), Gaps = 54/388 (13%)
Query: 129 LPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD-A 187
LP K L+ CSSL V KQ+ ++ L D + N +V S D +
Sbjct: 3 LPEKSVLLELISRCSSLR----VFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYS 58
Query: 188 RFVFDEIPSRSLSL-WTTMVCGYAQNFCSNEALALF--EGMVAEGFEPNGATLASVLSAC 244
+ I S S + T++ YA C + +F + V+ GF P+ T V AC
Sbjct: 59 SVILHSIRSVLSSFSYNTLLSSYA--VCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC 116
Query: 245 ARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWN 304
+ + G++IH + G + + ++LV+ Y G A K+F MP R+VV+W
Sbjct: 117 GKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWT 176
Query: 305 GMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV------ 358
G+I G G ++AL F M+ E PN T++ VL + G L +G+ +
Sbjct: 177 GIITGFTRTGLYKEALDTFSKMDVE----PNLATYVCVLVSSGRVGCLSLGKGIHGLILK 232
Query: 359 ---FCSMKT-------------------VYG-IEPKIE-HYGCMVDLLGRGGKLLEAKEL 394
S++T V+G +E K + + M+ L + EA +L
Sbjct: 233 RASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDL 292
Query: 395 IKGMP----WKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVHVSLSNMY 448
M KPD IL ++L A ++G + + V E IL ++ D H + ++ +MY
Sbjct: 293 FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTH-IGTAIVDMY 351
Query: 449 AEAGEWQDVLRLRKTMKEERLKKVPGWS 476
A+ G + L + + R K V W+
Sbjct: 352 AKCGYIETALEIFNGI---RSKNVFTWN 376
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 245/456 (53%), Gaps = 27/456 (5%)
Query: 38 LAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQ 97
+ + KC + Q+KQ+ + + F GDL+ A +IF I +
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITMR----------RHGALPGKHTFPFLLKACSS 144
P T WN +IR HP A S Y +M R AL T F LKAC+
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL----TCSFTLKACAR 121
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
+ + Q+H + + GL DS + L+ YS +GDL+ A +FDE+P R ++ W
Sbjct: 122 ALCSSAM-DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNA 180
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI-HEFMRVK 263
++ G ++EA+ L++ M EG + T+ + L AC+ G ++ GE I H +
Sbjct: 181 LIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS--- 237
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVEDALSL 322
VI+ +A ++MY+K G + A ++F+ +++VVTWN MI G A HG AL +
Sbjct: 238 --NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
F+ +E G+ P+DV+++ L+AC H GL++ G VF +M G+E ++HYGC+VDLL
Sbjct: 296 FDKLEDNGIK-PDDVSYLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLL 353
Query: 383 GRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHV 442
R G+L EA ++I M PD V+ +LL AS+ + E+A++ + EI + +N G V
Sbjct: 354 SRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFV 413
Query: 443 SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LSN+YA G W+DV R+R M+ +++KK+PG S +
Sbjct: 414 LLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYI 449
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 245/482 (50%), Gaps = 43/482 (8%)
Query: 38 LAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQ 97
++ + K + LKQV + M+V+ + H +L++A IF
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLC-NLSYARFIFDRFSF 85
Query: 98 PNTFMWNTLIRAQR-----HPQTALSLY-ITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
PNT ++ ++ A H +A S + + + R P +P +LK+ L+ A
Sbjct: 86 PNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST 145
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVS-GDLVDARFVFDEIPSRSLSLWTTMVCGYA 210
VH H+ K G L V L+ Y+ S + AR +FDE+ R++ WT M+ GYA
Sbjct: 146 -PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYA 204
Query: 211 -------------------------------QNFCSNEALALFEGMVAE-GFEPNGATLA 238
QN EA++LF M+ E PN T+
Sbjct: 205 RSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVV 264
Query: 239 SVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER 298
VLSACA++G L+L + IH F + + V + ++LV++Y K G + A +F ++
Sbjct: 265 CVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKK 324
Query: 299 NVVTWNGMICGLATHGHVEDALSLFENMEKEGV--AVPNDVTFIGVLSACCHGGLLDVGR 356
++ WN MI A HG E+A+++FE M K + P+ +TFIG+L+AC HGGL+ GR
Sbjct: 325 SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR 384
Query: 357 DVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKN 416
F M +GIEP+IEHYGC++DLLGR G+ EA E++ M K D I G+LL A K
Sbjct: 385 GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI 444
Query: 417 IGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
G+ ++A+V + ++AL P+N G ++N+Y E G W++ R RK +K + K PGWS
Sbjct: 445 HGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
Query: 477 LV 478
+
Sbjct: 505 RI 506
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 222/399 (55%), Gaps = 7/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G L ++F ++ + WN++I+A P A+SL+ MR P T L
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGL-DSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
S L + + V L+ G L D + N +V Y+ G + AR VF+ +P+
Sbjct: 356 SILSQLGD-IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERIH 257
+ W T++ GYAQN ++EA+ ++ M EG N T SVL AC+++G L G ++H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G+ + V + ++L +MY K G + A LF +P N V WN +I HGH E
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
A+ LF+ M EGV P+ +TF+ +LSAC H GL+D G+ F M+T YGI P ++HYGC
Sbjct: 535 KAVMLFKEMLDEGVK-PDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
MVD+ GR G+L A + IK M +PD I GALL A + GN ++ K+ +E + +EP++
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
G HV LSNMYA AG+W+ V +R + L+K PGWS
Sbjct: 654 VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 151/318 (47%), Gaps = 15/318 (4%)
Query: 45 CTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWN 104
CT ++ K +HA++VV+ + + G++ A F I + + WN
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQN--VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWN 121
Query: 105 TLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVL 160
+I RA + + M G P TFP +LKAC ++ ++H L
Sbjct: 122 LMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDG----NKIHCLAL 177
Query: 161 KFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALA 220
KFG D +VA L+ YS + +AR +FDE+P R + W M+ GY Q+ + EAL
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237
Query: 221 LFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYA 280
L G+ A + T+ S+LSAC +G G IH + G+E + + + L+++YA
Sbjct: 238 LSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 281 KNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFI 340
+ G + +K+FD M R++++WN +I + A+SLF+ M + P+ +T I
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ-PDCLTLI 352
Query: 341 GVLSACCHGGLLDVGRDV 358
+ S G + R V
Sbjct: 353 SLASILSQLGDIRACRSV 370
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 183/408 (44%), Gaps = 58/408 (14%)
Query: 103 WNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHK--QVHA 157
WN +I + + AL+L +R ++ T LL AC T A ++ +H+
Sbjct: 219 WNAMISGYCQSGNAKEALTLSNGLRAMDSV----TVVSLLSAC---TEAGDFNRGVTIHS 271
Query: 158 HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNE 217
+ +K GL + V+N L+ Y+ G L D + VFD + R L W +++ Y N
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV-GVILGSALV 276
A++LF+ M +P+ TL S+ S ++ G + + F KG + + +G+A+V
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVV 391
Query: 277 NMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPND 336
MYAK G + AR +F+ +P +V++WN +I G A +G +A+ ++ ME+EG N
Sbjct: 392 VMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQ 451
Query: 337 VTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL-- 394
T++ VL AC G L G + + G+ + + D+ G+ G+L +A L
Sbjct: 452 GTWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 395 ----IKGMPW----------------------------KPDVVILGALLEASKNIGNTEV 422
+ +PW KPD + LL A + G +
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 423 AKVVTEEILALEPDNHGVHVSLS------NMYAEAGEWQDVLRLRKTM 464
+ E + ++G+ SL +MY AG+ + L+ K+M
Sbjct: 571 GQWCFE----MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 223/394 (56%), Gaps = 5/394 (1%)
Query: 88 ASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A ++F + + + WNT+I R AL +++ MR G + T +L AC
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
AL K++H +K + L+ +V L+ Y+ G + DA VF+ + +S W++
Sbjct: 175 NCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
MV GY QN EAL L+ E N TL+SV+ AC+ L G+++H + G
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
V + S+ V+MYAK G++ + +F + E+N+ WN +I G A H ++ + LFE
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M+++G+ PN+VTF +LS C H GL++ GR F M+T YG+ P + HY CMVD+LGR
Sbjct: 354 KMQQDGMH-PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSL 444
G L EA ELIK +P+ P I G+LL + + N E+A+V E++ LEP+N G HV L
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLL 472
Query: 445 SNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
SN+YA +W+++ + RK +++ +KKV G S +
Sbjct: 473 SNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWI 506
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 153/310 (49%), Gaps = 25/310 (8%)
Query: 101 FMWNTLIRAQRHPQTA--------LSLYITMRRHGALPGKHTFPF--------LLKACSS 144
F N LIR + P+ + +S+ + + PG+++ F +L+ C+
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
A+ K H +++ L D + N L+ YS G + AR VFD + RSL W T
Sbjct: 74 -NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 132
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ Y +N +EAL +F M EGF+ + T++SVLSAC + +++H
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+++ + +G+AL+++YAK G I A ++F+ M +++ VTW+ M+ G + + E+AL L+
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRD---VFCSMKTVYGIEPKIEHYGCMVDL 381
++ + N T V+ AC + L G+ V C K+ +G + VD+
Sbjct: 253 RAQRMSLE-QNQFTLSSVICACSNLAALIEGKQMHAVIC--KSGFGSNVFVASSA--VDM 307
Query: 382 LGRGGKLLEA 391
+ G L E+
Sbjct: 308 YAKCGSLRES 317
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 228/402 (56%), Gaps = 13/402 (3%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQT-----ALSLYITMRRHGALPGKHTFPFLL 139
L A ++ + + N W +I R+ QT AL+++ M R P + TF +L
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMI--SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVL 160
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSH--VANGLVRCYSVSGDLVDARFVFDEIPSR 197
+C + L + KQ+H ++K+ DSH V + L+ Y+ +G + +AR +F+ +P R
Sbjct: 161 TSCIRAS-GLGLGKQIHGLIVKWNY--DSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+ T ++ GYAQ EAL +F + +EG PN T AS+L+A + L+ G++ H
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ + + +L ++L++MY+K G ++ AR+LFD MPER ++WN M+ G + HG
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKT-VYGIEPKIEHYG 376
+ L LF M E P+ VT + VLS C HG + D G ++F M YG +P EHYG
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYG 397
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
C+VD+LGR G++ EA E IK MP KP +LG+LL A + + ++ + V ++ +EP+
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 457
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
N G +V LSN+YA AG W DV +R M ++ + K PG S +
Sbjct: 458 NAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 21/345 (6%)
Query: 90 RIFSSIHQPNTFMWNTLIRAQR-----HPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
R FSS P ++ T++ + Q AL + M G G H + LL AC
Sbjct: 10 RSFSS--SPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLD 64
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
AL ++VHAH++K +++ L+ Y L DAR V DE+P +++ WT
Sbjct: 65 -KRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ Y+Q S+EAL +F M+ +PN T A+VL++C R+ L LG++IH +
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+ + +GS+L++MYAK G I AR++F+ +PER+VV+ +I G A G E+AL +F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG----CMVD 380
+ EG++ PN VT+ +L+A LLD G+ C + + ++ Y ++D
Sbjct: 244 RLHSEGMS-PNYVTYASLLTALSGLALLDHGKQAHCHV-----LRRELPFYAVLQNSLID 297
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKV 425
+ + G L A+ L MP + + L+ SK+ EV ++
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 238/439 (54%), Gaps = 7/439 (1%)
Query: 45 CTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIH-QPNTFMW 103
C ++++L+++H+ +++ + G L+HA +F P+T W
Sbjct: 15 CNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDW 74
Query: 104 NTLIRAQRHPQTALSLYITMRR----HGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
N LIR + + L+ + R + P TF F LK+C + ++P ++H V
Sbjct: 75 NYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERI-KSIPKCLEIHGSV 133
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEAL 219
++ G D+ VA LVRCYS +G + A VFDE+P R L W M+C ++ N+AL
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 220 ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMY 279
++++ M EG + TL ++LS+CA L +G +H E V + +AL++MY
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 280 AKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF 339
AK G++ A +F+GM +R+V+TWN MI G HGH +A+S F M GV PN +TF
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVR-PNAITF 312
Query: 340 IGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP 399
+G+L C H GL+ G + F M + + + P ++HYGCMVDL GR G+L + E+I
Sbjct: 313 LGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 400 WKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLR 459
D V+ LL + K N E+ +V ++++ LE N G +V ++++Y+ A + Q
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 460 LRKTMKEERLKKVPGWSLV 478
+RK ++ L+ VPGWS +
Sbjct: 433 MRKLIRSHDLQTVPGWSWI 451
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 220/432 (50%), Gaps = 7/432 (1%)
Query: 52 KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIR--- 108
KQ+HA V R D D A ++F I + N WN I
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD--DARKLFDEIPERNLETWNAFISNSV 185
Query: 109 AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDS 168
P+ A+ +I RR P TF L ACS L + Q+H VL+ G D
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL-HLNLGMQLHGLVLRSGFDTDV 244
Query: 169 HVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAE 228
V NGL+ Y + + +F E+ +++ W ++V Y QN +A L+ +
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
E + ++SVLSACA LELG IH VE + +GSALV+MY K G I +
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA-VPNDVTFIGVLSACC 347
+ FD MPE+N+VT N +I G A G V+ AL+LFE M G PN +TF+ +LSAC
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVIL 407
G ++ G +F SM++ YGIEP EHY C+VD+LGR G + A E IK MP +P + +
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 408 GALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
GAL A + G ++ + E + L+P + G HV LSN +A AG W + +R+ +K
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 468 RLKKVPGWSLVT 479
+KK G+S +T
Sbjct: 545 GIKKGAGYSWIT 556
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 173/375 (46%), Gaps = 14/375 (3%)
Query: 99 NTFMWNTLIR--AQR-HPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH-KQ 154
N W +LI AQ H TAL + MRR G +P TFP KA +SL LPV KQ
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLR--LPVTGKQ 129
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
+HA +K G LD V Y + DAR +FDEIP R+L W + +
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 215 SNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSA 274
EA+ F PN T + L+AC+ L LG ++H + G + V + +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVP 334
L++ Y K I + +F M +N V+W ++ + E A L+ K+ V
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET- 308
Query: 335 NDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
+D VLSAC L++GR + ++K +E I +VD+ G+ G + ++++
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKAC--VERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 394 LIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL---EPDNHGVHVSLSNMYAE 450
MP K ++V +L+ + G ++A + EE+ N+ VSL + +
Sbjct: 367 AFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 451 AGEWQDVLRLRKTMK 465
AG ++ +++ +M+
Sbjct: 426 AGAVENGMKIFDSMR 440
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 10/247 (4%)
Query: 153 KQVHAHVLKFGLGLDS----HVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCG 208
+ VHA ++K LDS +AN L+ YS AR V P+R++ WT+++ G
Sbjct: 26 RVVHARIVK---TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 209 YAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
AQN + AL F M EG PN T A A G++IH G +
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
V +G + +MY K ARKLFD +PERN+ TWN I T G +A+ F +
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKL 388
PN +TF L+AC L++G + + G + + ++D G+ K
Sbjct: 203 ID-GHPNSITFCAFLNACSDWLHLNLGMQLH-GLVLRSGFDTDVSVCNGLIDFYGK-CKQ 259
Query: 389 LEAKELI 395
+ + E+I
Sbjct: 260 IRSSEII 266
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 220/400 (55%), Gaps = 9/400 (2%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIR------AQRHPQTALSLYITMRRHGALPGKHTFPFL 138
LT A ++F + ++N +I Q AL+++ MR P TF L
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L+A +SLT +L + KQ+H + K+GL LD + L+ YS L D+R VFDE+ +
Sbjct: 461 LRASASLT-SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
L +W +M GY Q + EAL LF + P+ T A++++A ++LG+ H
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
+ +G+E + +AL++MYAK G+ A K FD R+VV WN +I A HG +
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
AL + E M EG+ PN +TF+GVLSAC H GL++ G F + +GIEP+ EHY CM
Sbjct: 640 ALQMLEKMMSEGIE-PNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCM 697
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
V LLGR G+L +A+ELI+ MP KP ++ +LL GN E+A+ E + +P +
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDS 757
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G LSN+YA G W + ++R+ MK E + K PG S +
Sbjct: 758 GSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 174/342 (50%), Gaps = 10/342 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITM-RRHGALPGKHTFPFL 138
G + +A ++F + + N W+T++ A H + +L +++ R P ++
Sbjct: 93 GGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSF 152
Query: 139 LKACSSLT-PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
++ACS L + Q+ + ++K G D +V L+ Y G++ AR VFD +P +
Sbjct: 153 IQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
S WTTM+ G + S +L LF ++ + P+G L++VLSAC+ LE G++IH
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G+E+ L + L++ Y K G + A KLF+GMP +N+++W ++ G + +
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHK 332
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYG 376
+A+ LF +M K G+ P+ +L++C L G V ++K G + + +
Sbjct: 333 EAMELFTSMSKFGLK-PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN-- 389
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIG 418
++D+ + L +A+++ DVV+ A++E +G
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFA-AADVVLFNAMIEGYSRLG 430
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 159/318 (50%), Gaps = 13/318 (4%)
Query: 129 LPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDAR 188
+ G+ F LL+ +S L VH ++ +GL LD++++N L+ YS +G +V AR
Sbjct: 41 IRGRREFARLLQLRAS-DDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYAR 99
Query: 189 FVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALF-EGMVAEGFEPNGATLASVLSACARS 247
VF+++P R+L W+TMV + E+L +F E PN L+S + AC S
Sbjct: 100 KVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--S 157
Query: 248 GCLELGE----RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTW 303
G G ++ F+ G + V +G+ L++ Y K+G I AR +FD +PE++ VTW
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217
Query: 304 NGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMK 363
MI G G +L LF + ++ V VP+ VLSAC L+ G+ + +
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNV-VPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 364 TVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASK-NIGNTEV 422
YG+E ++D + G+++ A +L GMP K +++ LL K N + E
Sbjct: 277 R-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLLSGYKQNALHKEA 334
Query: 423 AKVVTE-EILALEPDNHG 439
++ T L+PD +
Sbjct: 335 MELFTSMSKFGLKPDMYA 352
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 227/420 (54%), Gaps = 38/420 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A +F I + + W T+I + AL Y M R G P + LL
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 140 KA-----------------------CSSLTPALPVHKQVHAHVLKFGL-----GLDSHVA 171
A C A +H ++ +K L + H+A
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 372
Query: 172 --NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG 229
N L+ + +G + AR VFD+ + + W M+ GYAQ+ AL LF M++
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 230 -FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
+P+ T+ SV SA + G LE G+R H+++ + L +A+++MYAK G+I A
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Query: 289 RKLF---DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
+F + + WN +ICG ATHGH + AL L+ +++ + PN +TF+GVLSA
Sbjct: 493 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK-PNSITFVGVLSA 551
Query: 346 CCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
CCH GL+++G+ F SMK+ +GIEP I+HYGCMVDLLG+ G+L EAKE+IK MP K DV+
Sbjct: 552 CCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVM 611
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
I G LL AS+ GN E+A++ E+ A++P + G V LSN+YA+AG W+DV +R+ M+
Sbjct: 612 IWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMR 671
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM 225
LDS N +V Y S L DA +FD +P RS +TT++ GYAQN +EA+ LF M
Sbjct: 105 LDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM 164
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
G N TLA+V+SAC+ G + + +E V + + L++MY +
Sbjct: 165 RNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCL 224
Query: 286 AMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
ARKLFD MPERN+VTWN M+ G + G +E A LF+ + ++ + V++ ++
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI-----VSWGTMIDG 279
Query: 346 CCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
C LD + M G++P MVDLL +
Sbjct: 280 CLRKNQLDEALVYYTEMLRC-GMKPS---EVMMVDLLSASAR 317
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 172/429 (40%), Gaps = 73/429 (17%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIR--AQRHPQT-ALSLYITMRRHGALPGKHTFPFLLKA 141
L A ++F + + + + TLI+ AQ + + A+ L+ MR G + + T ++ A
Sbjct: 123 LWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 182
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
CS L + + + +K L V+ L+ Y + L DAR +FDE+P R+L
Sbjct: 183 CSHLGGIWDC-RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT 241
Query: 202 WTTMVCGYAQ-----------------NFCS--------------NEALALFEGMVAEGF 230
W M+ GY++ + S +EAL + M+ G
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
+P+ + +LSA ARS G ++H + +G + L + +++ YA + I +A +
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
F+ + ++ + N +I G +G VE A +F+
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD---------------------- 399
Query: 351 LLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGAL 410
+D+F + G L L +E+I KPD + + ++
Sbjct: 400 -----KDIFSWNAMISGYAQS----------LSPQLALHLFREMISSSQVKPDAITMVSV 444
Query: 411 LEASKNIGNTEVAKVVTEEI-LALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
A ++G+ E K + + + P N + ++ +MYA+ G + L + K
Sbjct: 445 FSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISS 504
Query: 470 KKVPGWSLV 478
+ W+ +
Sbjct: 505 STISPWNAI 513
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 233/431 (54%), Gaps = 37/431 (8%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
GDL A ++F++I + + WN++I + P AL L+ M T +L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC+ + L +QV +++ + + ++ +AN ++ Y+ G + DA+ +FD + +
Sbjct: 240 SACAKIR-NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 200 SLWTTMVCGYA-------------------------------QNFCSNEALALF-EGMVA 227
WTTM+ GYA QN NEAL +F E +
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
+ + N TL S LSACA+ G LELG IH +++ G+ + + SAL++MY+K G +
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 288 ARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
+R++F+ + +R+V W+ MI GLA HG +A+ +F M++ V PN VTF V AC
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK-PNGVTFTNVFCACS 477
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVIL 407
H GL+D +F M++ YGI P+ +HY C+VD+LGR G L +A + I+ MP P +
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 537
Query: 408 GALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
GALL A K N +A++ +L LEP N G HV LSN+YA+ G+W++V LRK M+
Sbjct: 538 GALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVT 597
Query: 468 RLKKVPGWSLV 478
LKK PG S +
Sbjct: 598 GLKKEPGCSSI 608
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 199/406 (49%), Gaps = 38/406 (9%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNT 100
L ++C ++ QLKQ H M+ T F+D L +A ++F I +PN+
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 101 FMWNTLIRAQRH-PQTALSLYITM---RRHGALPGKHTFPFLLKACSSLTPALPVHKQVH 156
F WNTLIRA P LS++ + P K+TFPFL+KA + ++ +L + + +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS-SLSLGQSLH 154
Query: 157 AHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSN 216
+K +G D VAN L+ CY GDL A VF I + + W +M+ G+ Q +
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
+AL LF+ M +E + + T+ VLSACA+ LE G ++ ++ V V + L +A++
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 277 NMYAKNGAIAMARKLFDG-------------------------------MPERNVVTWNG 305
+MY K G+I A++LFD MP++++V WN
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 306 MICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTV 365
+I +G +AL +F ++ + N +T + LSAC G L++GR + +K
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK- 393
Query: 366 YGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+GI ++ + + G L +++E+ + K DV + A++
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMI 438
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 219/399 (54%), Gaps = 5/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G L A ++F + + N WN++I A +P+ A+ ++ M G P + L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC+ L L + +H ++ GL + V N L+ Y ++ A +F ++ SR+L
Sbjct: 345 HACADLGD-LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W M+ G+AQN +AL F M + +P+ T SV++A A + IH
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ ++ V + +ALV+MYAK GAI +AR +FD M ER+V TWN MI G THG + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L LFE M+K G PN VTF+ V+SAC H GL++ G F MK Y IE ++HYG MV
Sbjct: 524 LELFEEMQK-GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLLGR G+L EA + I MP KP V + GA+L A + N A+ E + L PD+ G
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
HV L+N+Y A W+ V ++R +M + L+K PG S+V
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 169/321 (52%), Gaps = 7/321 (2%)
Query: 39 AVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQP 98
A+L ++C+++++L+Q+ + + +H G + A+R+F I
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY--GSVDEAARVFEPIDSK 98
Query: 99 NTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQV 155
+++T+++ AL ++ MR P + F +LLK C L V K++
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD-EAELRVGKEI 157
Query: 156 HAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS 215
H ++K G LD GL Y+ + +AR VFD +P R L W T+V GY+QN +
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
AL + + M E +P+ T+ SVL A + + +G+ IH + G + V + +AL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 276 VNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPN 335
V+MYAK G++ AR+LFDGM ERNVV+WN MI + + ++A+ +F+ M EGV P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK-PT 336
Query: 336 DVTFIGVLSACCHGGLLDVGR 356
DV+ +G L AC G L+ GR
Sbjct: 337 DVSVMGALHACADLGDLERGR 357
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 5/264 (1%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKA 141
+ A ++F + + + WNT++ + AL + +M P T +L A
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
S+L + V K++H + ++ G +++ LV Y+ G L AR +FD + R++
Sbjct: 246 VSALR-LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W +M+ Y QN EA+ +F+ M+ EG +P ++ L ACA G LE G IH+
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
G++ V + ++L++MY K + A +F + R +V+WN MI G A +G DAL+
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 322 LFENMEKEGVAVPNDVTFIGVLSA 345
F M V P+ T++ V++A
Sbjct: 425 YFSQMRSRTVK-PDTFTYVSVITA 447
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 226/404 (55%), Gaps = 8/404 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
G L +IFSS+ + + WN++I R++R A+ ++ +R G + TF +
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L A SSL+ + KQ+H LK + ++ N L+ CY G++ +F + R
Sbjct: 524 LSAVSSLSFG-ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 199 LSL-WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
++ W +M+ GY N +AL L M+ G + A+VLSA A LE G +H
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+E V++GSALV+MY+K G + A + F+ MP RN +WN MI G A HG E
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+AL LFE M+ +G P+ VTF+GVLSAC H GLL+ G F SM YG+ P+IEH+ C
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEA--SKNIGNTEVAKVVTEEILALEP 435
M D+LGR G+L + ++ I+ MP KP+V+I +L A N E+ K E + LEP
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP 822
Query: 436 DNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVT 479
+N +V L NMYA G W+D+++ RK MK+ +KK G+S VT
Sbjct: 823 ENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 866
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 16/348 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G + +A F I N+ WN++I ++A ++ +M+ G+ P ++TF L+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 140 K-ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
ACS P + + +Q+ + K GL D V +GLV ++ SG L AR VF+++ +R+
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 199 LSLWTTMVCGYAQNFCSNEALALF---EGMVAEGFEPNGATLASVLS-ACARSGCLELGE 254
++ G + EA LF M+ E L+S + A L+ G
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 255 RIHEFMRVKG-VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
+H + G V+ V +G+ LVNMYAK G+IA AR++F M +++ V+WN MI GL +
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKI 372
G +A+ +++M + + +P T I LS+C +G+ + S+K GI+ +
Sbjct: 394 GCFIEAVERYKSMRRHDI-LPGSFTLISSLSSCASLKWAKLGQQIHGESLKL--GIDLNV 450
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDV---VILGALLEASKNI 417
++ L G L E +++ MP V I+GAL + +++
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 172/354 (48%), Gaps = 16/354 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G L++A ++F+ + N N L+ Q+ + A L++ M + ++ LL
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVS-PESYVILL 315
Query: 140 KACSSLTPA----LPVHKQVHAHVLKFGL-GLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
+ + A L ++VH HV+ GL + NGLV Y+ G + DAR VF +
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
+ W +M+ G QN C EA+ ++ M P TL S LS+CA +LG+
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA-TH 313
+IH G+++ V + +AL+ +YA+ G + RK+F MPE + V+WN +I LA +
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYGIEPKI 372
+ +A+ F N ++ G + N +TF VLSA ++G+ + ++K E
Sbjct: 496 RSLPEAVVCFLNAQRAGQKL-NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVV 426
E+ ++ G+ G++ +++ M + D V +++ S I N +AK +
Sbjct: 555 EN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI--SGYIHNELLAKAL 604
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 143/305 (46%), Gaps = 9/305 (2%)
Query: 156 HAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS 215
H+ + K L D ++ N L+ Y +GD V AR VFDE+P R+ W +V GY++N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL--GERIHEFMRVKGVEVGVILGS 273
EAL MV EG N SVL AC G + + G +IH M V ++ +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 274 ALVNMYAKN-GAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
L++MY K G++ A F + +N V+WN +I + G A +F +M+ +G +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG-S 202
Query: 333 VPNDVTFIGVLSACCHGGLLDVG--RDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLE 390
P + TF +++ C DV + C+++ G+ + +V + G L
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKS-GLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 391 AKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE--EILALEPDNHGVHVSLSNMY 448
A+++ M + V + G ++ + E K+ + ++ + P+++ + +S Y
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY 321
Query: 449 AEAGE 453
+ A E
Sbjct: 322 SLAEE 326
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 156/335 (46%), Gaps = 16/335 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
GD A ++F + N W ++ R H + AL M + G ++ F +
Sbjct: 50 GDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE-ALVFLRDMVKEGIFSNQYAFVSV 108
Query: 139 LKACSSL-TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCY-SVSGDLVDARFVFDEIPS 196
L+AC + + + +Q+H + K +D+ V+N L+ Y G + A F +I
Sbjct: 109 LRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV 168
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLAS-VLSACARSG-CLELGE 254
++ W +++ Y+Q A +F M +G P T S V +AC+ + + L E
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
+I ++ G+ + +GS LV+ +AK+G+++ ARK+F+ M RN VT NG++ GL
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL-----LDVGRDVFCSMKTVYGIE 369
E+A LF +M P +++ +LS+ L L GR+V + T ++
Sbjct: 289 WGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDV 404
+ +V++ + G + +A+ + M K V
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 253/468 (54%), Gaps = 27/468 (5%)
Query: 35 PPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXX---XXXXXXXXXXGDLTHASRI 91
P L++L T+ Q KQ+HAQ+V+ ++ L H +
Sbjct: 8 PRFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHL-LV 66
Query: 92 FSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALP--GKHTFPFLL--KACSSLTP 147
F P+ F++NTL++ + P+ ++ ++ +L + TF F+L A S+ +
Sbjct: 67 FPRFGHPDKFLFNTLLKCSK-PEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSS 125
Query: 148 ALPVHKQVHAHVLKFGLGLDSH-VANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
AL V + VH V K G +S + L+ Y+ +GDL AR VFDE+P R+ W M+
Sbjct: 126 ALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 207 CGYAQ-----NFCSNEALALFEGM--VAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
GY N + +A+ LF G P T+ VLSA +++G LE+G +H +
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 260 MRVKGV--EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G EV V +G+ALV+MY+K G + A +F+ M +NV TW M GLA +G
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+ +L M + G+ PN++TF +LSA H GL++ G ++F SMKT +G+ P IEHYGC
Sbjct: 306 ETPNLLNRMAESGIK-PNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
+VDLLG+ G++ EA + I MP KPD ++L +L A G T + + + + +L +E ++
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERED 424
Query: 438 HGV-------HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ +V+LSN+ A G+W +V +LRK MKE R+K PG+S V
Sbjct: 425 EKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 234/439 (53%), Gaps = 16/439 (3%)
Query: 52 KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIRAQR 111
KQ H Q V +D G L A ++F I + N W ++IR
Sbjct: 96 KQTHQQAFVFGYQSD--IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 112 ---HPQTALSLYITMRRHGALPGKHTF------PFLLKACSSLTPALPVHKQVHAHVLKF 162
+ A+SL+ + F ++ ACS + PA + + +H+ V+K
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV-PAKGLTESIHSFVIKR 212
Query: 163 GLGLDSHVANGLVRCYSVSGD--LVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALA 220
G V N L+ Y+ G+ + AR +FD+I + + +++ YAQ+ SNEA
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFE 272
Query: 221 LFEGMVAEGFEP-NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMY 279
+F +V N TL++VL A + SG L +G+ IH+ + G+E VI+G+++++MY
Sbjct: 273 VFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 280 AKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF 339
K G + ARK FD M +NV +W MI G HGH AL LF M GV PN +TF
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR-PNYITF 391
Query: 340 IGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP 399
+ VL+AC H GL G F +MK +G+EP +EHYGCMVDLLGR G L +A +LI+ M
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 400 WKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLR 459
KPD +I +LL A + N E+A++ + L+ N G ++ LS++YA+AG W+DV R
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 460 LRKTMKEERLKKVPGWSLV 478
+R MK L K PG+SL+
Sbjct: 512 VRMIMKNRGLVKPPGFSLL 530
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 169/320 (52%), Gaps = 17/320 (5%)
Query: 95 IHQPNTFMWNTLI-RAQRHPQTALSL--YITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
+ + + F WN++I R +A +L + +MR+ P + +FP +KACSSL
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS- 94
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQ 211
KQ H FG D V++ L+ YS G L DAR VFDEIP R++ WT+M+ GY
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 212 NFCSNEALALFEGMVAEGFEPNGAT------LASVLSACARSGCLELGERIHEFMRVKGV 265
N + +A++LF+ ++ + + + A L SV+SAC+R L E IH F+ +G
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 266 EVGVILGSALVNMYAK--NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
+ GV +G+ L++ YAK G +A+ARK+FD + +++ V++N ++ A G +A +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTV--YGIEPKIEHYGCMVDL 381
+ K V N +T VL A H G L +G+ C V G+E + ++D+
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK---CIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 382 LGRGGKLLEAKELIKGMPWK 401
+ G++ A++ M K
Sbjct: 332 YCKCGRVETARKAFDRMKNK 351
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 227/400 (56%), Gaps = 6/400 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI--RAQRH-PQTALSLYITMRRHGALPGKHTFPFLL 139
G L++A R+F I WN LI AQ + P+ +L ++ M+ G LP T LL
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
ACS L +L + K+VH +++ L D V ++ Y G+L + +FD + +SL
Sbjct: 504 SACSKL-KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W T++ GY QN + AL +F MV G + G ++ V AC+ L LG H +
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+E + +L++MYAKNG+I + K+F+G+ E++ +WN MI G HG ++A
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ LFE M++ G P+D+TF+GVL+AC H GL+ G MK+ +G++P ++HY C++
Sbjct: 683 IKLFEEMQRTG-HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVI 741
Query: 380 DLLGRGGKLLEAKELI-KGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
D+LGR G+L +A ++ + M + DV I +LL + + N E+ + V ++ LEP+
Sbjct: 742 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 801
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V LSN+YA G+W+DV ++R+ M E L+K G S +
Sbjct: 802 ENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 191/436 (43%), Gaps = 53/436 (12%)
Query: 91 IFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITM-RRHGALPGKHTFPFLLKACSSLT 146
+F ++ N F WN +I + + L +I M LP T+P ++KAC+ ++
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
+ + VH V+K GL D V N LV Y G + DA +FD +P R+L W +M+
Sbjct: 202 D-VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
Query: 207 CGYAQNFCSNEALALFEGMVAE----GFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
++ N S E+ L M+ E F P+ ATL +VL CAR + LG+ +H +
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
++ ++L +AL++MY+K G I A+ +F +NVV+WN M+ G + G +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 323 FENMEKEGVAVPND-VTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMVD 380
M G V D VT + + C H L +++ C S+K + + + V
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVA 438
Query: 381 LLGRGGKLLEAKELIKGMPWK----------------------------------PDVVI 406
+ G L A+ + G+ K PD
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 407 LGALLEASKNIGNTEVAKVVTEEILA--LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
+ +LL A + + + K V I+ LE D V++S+ ++Y GE V L M
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF-VYLSVLSLYIHCGELCTVQALFDAM 557
Query: 465 KEERLKKVPGWSLVTT 480
++ K + W+ V T
Sbjct: 558 ED---KSLVSWNTVIT 570
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 14/327 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRH--GALPGKHTFPFLLK 140
G +T+A IF + N WNT++ + +R+ G K +L
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 141 ACSSL--TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
A LP K++H + LK + VAN V Y+ G L A+ VF I S++
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
++ W ++ G+AQ+ +L M G P+ T+ S+LSAC++ L LG+ +H
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
F+ +E + + +++++Y G + + LFD M ++++V+WN +I G +G +
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH---Y 375
AL +F M G+ + ++ + V AC L +GR+ Y ++ +E
Sbjct: 581 ALGVFRQMVLYGIQLCG-ISMMPVFGACSLLPSLRLGREAH-----AYALKHLLEDDAFI 634
Query: 376 GC-MVDLLGRGGKLLEAKELIKGMPWK 401
C ++D+ + G + ++ ++ G+ K
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEK 661
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 167 DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
D + ++ Y++ G D+RFVFD + S++L W ++ Y++N +E L F M+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 227 AE-GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
+ P+ T V+ ACA + +G +H + G+ V +G+ALV+ Y +G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 286 AMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE---GVAVPNDVTFIGV 342
A +LFD MPERN+V+WN MI + +G E++ L M +E G +P+ T + V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 343 LSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKP 402
L C + +G+ V ++ ++ ++D+ + G + A+ + K M
Sbjct: 299 LPVCAREREIGLGKGVH-GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNK 356
Query: 403 DVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSN 446
+VV ++ G+T V ++LA D V++ N
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 11/285 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH----PQTALSLYITMRRHGA---LPGKHTF 135
G +T A ++F + + N WN++IR ++ L L M +G +P T
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
+L C+ + + K VH +K L + + N L+ YS G + +A+ +F
Sbjct: 296 VTVLPVCAR-EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVA--EGFEPNGATLASVLSACARSGCLELG 253
++++ W TMV G++ ++ + M+A E + + T+ + + C L
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
+ +H + + ++ +A V YAK G+++ A+++F G+ + V +WN +I G A
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
+L M+ G+ +P+ T +LSAC L +G++V
Sbjct: 475 NDPRLSLDAHLQMKISGL-LPDSFTVCSLLSACSKLKSLRLGKEV 518
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 244/455 (53%), Gaps = 14/455 (3%)
Query: 34 DPPTLA-VLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIF 92
D TL+ ++A C V+ +KQ+H V+ F D G L A +F
Sbjct: 139 DGFTLSGLIAACCDRVDLIKQLHC-FSVSGGF-DSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 93 SSIHQ-PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPA 148
+ + + WN++I A + AL+LY M G T +L A +SL
Sbjct: 197 YGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH- 255
Query: 149 LPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGD---LVDARFVFDEIPSRSLSLWTTM 205
L +Q H ++K G +SHV +GL+ YS G + D+ VF EI S L +W TM
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 206 VCGYAQNF-CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
+ GY+ N S EA+ F M G P+ + V SAC+ ++IH
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 265 VEVGVI-LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
+ I + +AL+++Y K+G + AR +FD MPE N V++N MI G A HGH +AL L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
+ M G+A PN +TF+ VLSAC H G +D G++ F +MK + IEP+ EHY CM+DLLG
Sbjct: 436 QRMLDSGIA-PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVS 443
R GKL EA+ I MP+KP V ALL A + N +A+ E++ ++P +V
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554
Query: 444 LSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
L+NMYA+A +W+++ +RK+M+ +R++K PG S +
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 34/398 (8%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A ++F I QP+T +NTLI R A+ L+ MR+ G T L+ AC
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD 152
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVF---DEIPSRSLSL 201
+ KQ+H + G S V N V YS G L +A VF DE+ R
Sbjct: 153 RVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL--RDEVS 207
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W +M+ Y Q+ +ALAL++ M+ +GF+ + TLASVL+A L G + H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 262 VKGVEVGVILGSALVNMYAKNG---AIAMARKLFDGMPERNVVTWNGMICGLATHGHV-E 317
G +GS L++ Y+K G + + K+F + ++V WN MI G + + + E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK------ 371
+A+ F M++ G P+D +F+ V SAC ++ C K ++G+ K
Sbjct: 328 EAVKSFRQMQRIG-HRPDDCSFVCVTSACS-----NLSSPSQC--KQIHGLAIKSHIPSN 379
Query: 372 -IEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
I ++ L + G L +A+ + MP + + V +++ G+ A ++ + +
Sbjct: 380 RISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 431 L--ALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
L + P N V++ + A G+ + TMKE
Sbjct: 439 LDSGIAP-NKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N +V+ Y+ + AR +FDEIP + T++ GYA + A+ LF+ M GFE
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
+G TL+ +++AC ++L +++H F G + + +A V Y+K G + A +
Sbjct: 138 VDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 292 FDGMPE-RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
F GM E R+ V+WN MI H AL+L++ M +G + + T VL+A
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI-DMFTLASVLNA 249
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 266 EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFEN 325
E V + +V YAK+ I +AR+LFD +P+ + V++N +I G A A+ LF+
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 326 MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRG 385
M K G V + T G+++ACC +D+ + + C G + V +G
Sbjct: 131 MRKLGFEV-DGFTLSGLIAACC--DRVDLIKQLHC-FSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 386 GKLLEAKELIKGM-------PWKPDVVILGALLEASKNIG 418
G L EA + GM W +V G E +K +
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALA 226
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 223/400 (55%), Gaps = 6/400 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
GDL A +F + + + ++I A+ L+ M G P +T +L
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C+ L K+VH + + LG D V+N L+ Y+ G + +A VF E+ + +
Sbjct: 405 NCCARYR-LLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERIHE 258
W T++ GY++N +NEAL+LF ++ E F P+ T+A VL ACA + G IH
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
++ G + ++LV+MYAK GA+ +A LFD + +++V+W MI G HG ++
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
A++LF M + G+ ++++F+ +L AC H GL+D G F M+ IEP +EHY C+
Sbjct: 584 AIALFNQMRQAGIE-ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
VD+L R G L++A I+ MP PD I GALL + + ++A+ V E++ LEP+N
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENT 702
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G +V ++N+YAEA +W+ V RLRK + + L+K PG S +
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 13/329 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
GDL ASR+F + WN L+ ++ L+ M G +TF +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 140 KACSSLTPALPVH--KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
K+ SSL VH +Q+H +LK G G + V N LV Y + + AR VFDE+ R
Sbjct: 203 KSFSSLR---SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+ W +++ GY N + + L++F M+ G E + AT+ SV + CA S + LG +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ L++MY+K G + A+ +F M +R+VV++ MI G A G
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 379
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMK-TVYGIEPKIEHYG 376
+A+ LFE ME+EG++ P+ T VL+ C LLD G+ V +K G + + +
Sbjct: 380 EAVKLFEEMEEEGIS-PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN-- 436
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
++D+ + G + EA+ + M K D++
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVK-DII 464
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 165/318 (51%), Gaps = 7/318 (2%)
Query: 88 ASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A ++F + + + WN++I + + LS+++ M G T + C+
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
+ + + + VH+ +K + N L+ YS GDL A+ VF E+ RS+ +T+
Sbjct: 309 -SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ GYA+ + EA+ LFE M EG P+ T+ +VL+ CAR L+ G+R+HE+++
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+ + + +AL++MYAK G++ A +F M +++++WN +I G + + + +ALSLF
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS-MKTVYGIEPKIEHYGCMVDLLG 383
+ +E P++ T VL AC D GR++ M+ Y + + + +VD+
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYA 545
Query: 384 RGGKLLEAKELIKGMPWK 401
+ G LL A L + K
Sbjct: 546 KCGALLLAHMLFDDIASK 563
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 172/383 (44%), Gaps = 45/383 (11%)
Query: 133 HTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD 192
T +L+ C+ + +L K+V + G +DS++ + L Y+ GDL +A VFD
Sbjct: 95 RTLCSVLQLCAD-SKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153
Query: 193 EIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL 252
E+ W ++ A++ + ++ LF+ M++ G E + T + V + + +
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
GE++H F+ G +G++LV Y KN + ARK+FD M ER+V++WN +I G +
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR--------------DV 358
+G E LS+F M G+ + + T + V + C L+ +GR D
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEI-DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 359 FC--------------SMKTVYG--IEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK- 401
FC S K V+ + + Y M+ R G EA +L + M +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 402 --PDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSN----MYAEAGEWQ 455
PDV + A+L + K V E I + ++ G + +SN MYA+ G Q
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWI---KENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 456 DVLRLRKTMKEERLKKVPGWSLV 478
+ E R+K + W+ +
Sbjct: 450 EA---ELVFSEMRVKDIISWNTI 469
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 183 DLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLS 242
D VD+ FD RS++ T + + ++ A+ L V+ ++ + TL SVL
Sbjct: 49 DCVDSITTFD----RSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQ 102
Query: 243 ACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVT 302
CA S L+ G+ + F+R G + LGS L MY G + A ++FD + +
Sbjct: 103 LCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALF 162
Query: 303 WNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM 362
WN ++ LA G ++ LF+ M GV + + TF V + F S+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEM-DSYTFSCVSKS-------------FSSL 208
Query: 363 KTVYGIE 369
++V+G E
Sbjct: 209 RSVHGGE 215
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 217/399 (54%), Gaps = 5/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
G L + ++F I + W ++I + + A+ L+ M G P + T +L
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
CSS P+LP K++H + L+ G+ + + LV YS G L AR V+D +P
Sbjct: 559 TVCSS-HPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
++++ GY+Q+ + LF MV GF + ++S+L A A S LG ++H +
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G+ +GS+L+ MY+K G+I K F + +++ W +I A HG +A
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L ++ M+++G P+ VTF+GVLSAC HGGL++ SM YGIEP+ HY CMV
Sbjct: 738 LQVYNLMKEKGFK-PDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
D LGR G+L EA+ I M KPD ++ G LL A K G E+ KV ++ + LEP + G
Sbjct: 797 DALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAG 856
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++SLSN+ AE GEW +V RK MK ++K PGWS V
Sbjct: 857 AYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 14/294 (4%)
Query: 46 TTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIF---SSIHQPNTFM 102
+ V + QVHA + + + D GD+ + ++F I + N +
Sbjct: 365 SMVCEASQVHAWVFKSGFYLD--SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN--I 420
Query: 103 WNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
N +I + + P A+ L+ M + G + + LL S+ L + KQVH +
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL----SVLDCLNLGKQVHGYT 476
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEAL 219
LK GL LD V + L YS G L ++ +F IP + + W +M+ G+ + EA+
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 220 ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMY 279
LF M+ +G P+ +TLA+VL+ C+ L G+ IH + G++ G+ LGSALVNMY
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 280 AKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
+K G++ +AR+++D +PE + V+ + +I G + HG ++D LF +M G +
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 161/322 (50%), Gaps = 12/322 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLL 139
G + A +FS I P+ W ++ +AL ++ MR G T ++
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358
Query: 140 KACSSLTPALPVH-KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS-R 197
AC P++ QVHA V K G LDS VA L+ YS SGD+ + VF+++ +
Sbjct: 359 SACG--RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
++ M+ ++Q+ +A+ LF M+ EG + ++ S+LS CL LG+++H
Sbjct: 417 RQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVH 473
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G+ + + +GS+L +Y+K G++ + KLF G+P ++ W MI G +G++
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+A+ LF M +G + P++ T VL+ C L G+++ GI+ ++
Sbjct: 534 EAIGLFSEMLDDGTS-PDESTLAAVLTVCSSHPSLPRGKEIH-GYTLRAGIDKGMDLGSA 591
Query: 378 MVDLLGRGGKLLEAKELIKGMP 399
+V++ + G L A+++ +P
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLP 613
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 158/323 (48%), Gaps = 17/323 (5%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLLKACSS 144
A ++F N + WNT+I Q L+ M P +T+ +L AC+S
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
L L K V A V+K G D V +V Y+ G + +A VF IP+ S+ WT
Sbjct: 264 LEK-LRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ GY ++ + AL +F+ M G E N T+ SV+SAC R + ++H ++ G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLF---DGMPERNVVTWNGMICGLATHGHVEDALS 321
+ + +AL++MY+K+G I ++ ++F D + +N+V N MI + A+
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIR 439
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYGIEPKIEHYGCMVD 380
LF M +EG+ ++ + +LS L++G+ V ++K+ G+ + +
Sbjct: 440 LFTRMLQEGLRT-DEFSVCSLLSVL---DCLNLGKQVHGYTLKS--GLVLDLTVGSSLFT 493
Query: 381 LLGRGGKLLEAKELIKGMPWKPD 403
L + G L E+ +L +G+P+K +
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDN 516
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 119/277 (42%), Gaps = 15/277 (5%)
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLK-FGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
F F +S L K + AH+L+ + L D + L+ YS SG + DA +FD
Sbjct: 50 FRFFNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDT 109
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
IP + M+ GY Q+ E+L F M GFE N + SV+SAC+
Sbjct: 110 IPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFS 169
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
E + G ++ SAL+++++KN A K+F NV WN +I G +
Sbjct: 170 ELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRN 229
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVG-----RDVFCSMKTVYGI 368
+ LF M G P+ T+ VL+AC L G R + C + V+
Sbjct: 230 QNYGAVFDLFHEM-CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC 288
Query: 369 EPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
+VDL + G + EA E+ +P P VV
Sbjct: 289 TA-------IVDLYAKCGHMAEAMEVFSRIP-NPSVV 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 64/255 (25%)
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
V L +L++ Y+ +G++A A KLFD +P+ +VV+ N MI G H E++L F M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 329 EGVAVPNDVTFIGVLSAC-------------CH-------------GGLLDV-------- 354
G N++++ V+SAC CH L+DV
Sbjct: 144 LGFEA-NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 355 ----------GRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDV 404
+V+C T+ + ++YG + DL E+ G KPD
Sbjct: 203 DAYKVFRDSLSANVYC-WNTIIAGALRNQNYGAVFDLF---------HEMCVGFQ-KPDS 251
Query: 405 VILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
++L A ++ KVV ++ ++ V ++ ++YA+ G + +
Sbjct: 252 YTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAM------ 305
Query: 465 KEERLKKVPGWSLVT 479
E ++P S+V+
Sbjct: 306 --EVFSRIPNPSVVS 318
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 226/401 (56%), Gaps = 9/401 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQT-----ALSLYITMRRHGALPGKHTFPF 137
GD++ A ++F+ + + + W+ +I R Q A+ L+I MR +P + T
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMI--ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
+L C+ + + +Q+H V+K G LD +V+N L+ Y+ + A +F E+ S+
Sbjct: 354 ILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+ W T++ GY +A ++F + T +S L ACA ++LG ++H
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
V + ++L++MYAK G I A+ +F+ M +V +WN +I G +THG
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGR 532
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
AL + + M K+ PN +TF+GVLS C + GL+D G++ F SM +GIEP +EHY C
Sbjct: 533 QALRILDIM-KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
MV LLGR G+L +A +LI+G+P++P V+I A+L AS N N E A+ EEIL + P +
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKD 651
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V +SNMYA A +W +V +RK+MKE +KK PG S +
Sbjct: 652 EATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 156/320 (48%), Gaps = 8/320 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A +F I + +W ++ + + +L L MR G +P +TF L
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
KA L A K VH +LK LD V GL++ Y+ GD+ DA VF+E+P +
Sbjct: 255 KASIGLG-AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W+ M+ + QN NEA+ LF M PN TL+S+L+ CA C LGE++H
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G ++ + + +AL+++YAK + A KLF + +N V+WN +I G G A
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYGIEPKIEHYGCM 378
S+F + V+V +VTF L AC +D+G V ++KT K+ +
Sbjct: 434 FSMFREALRNQVSV-TEVTFSSALGACASLASMDLGVQVHGLAIKT--NNAKKVAVSNSL 490
Query: 379 VDLLGRGGKLLEAKELIKGM 398
+D+ + G + A+ + M
Sbjct: 491 IDMYAKCGDIKFAQSVFNEM 510
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 146/318 (45%), Gaps = 6/318 (1%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQRHP-QTALSLYITMRRHGALPGKHTFPFLLKACSSLT 146
A +F + + N + TL AQ + Q + LY + R G H F LK SL
Sbjct: 103 ALNLFDEMPERNNVSFVTL--AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
A + +H+ ++K G ++ V L+ YSV G + AR VF+ I + + +W +V
Sbjct: 161 KA-EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
Y +N ++L L M GF PN T + L A G + + +H +
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
+ +G L+ +Y + G ++ A K+F+ MP+ +VV W+ MI +G +A+ LF M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
+E VPN+ T +L+ C G +G + + V G + I ++D+ +
Sbjct: 340 -REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV-GFDLDIYVSNALIDVYAKCE 397
Query: 387 KLLEAKELIKGMPWKPDV 404
K+ A +L + K +V
Sbjct: 398 KMDTAVKLFAELSSKNEV 415
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 18/308 (5%)
Query: 106 LIRAQRHPQTALSLYITM----RRHGALPG--KHTFPFLLKACSSLTPALPVHKQVHAHV 159
+IR R Q S+ +PG H + +L+ C + K +H +
Sbjct: 17 MIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISA-KAIHCDI 75
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEAL 219
LK G LD N L+ Y +G DA +FDE+P R+ + T+ GYA + +
Sbjct: 76 LKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPI 131
Query: 220 ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMY 279
L+ + EG E N S L E+ +H + G + +G+AL+N Y
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 280 AKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF 339
+ G++ AR +F+G+ +++V W G++ +G+ ED+L L M G +PN+ TF
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF-MPNNYTF 250
Query: 340 IGVLSACCHGGLLDVGRDVFCS-MKTVYGIEPKIEHYGC-MVDLLGRGGKLLEAKELIKG 397
L A G D + V +KT Y ++P++ G ++ L + G + +A ++
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV---GVGLLQLYTQLGDMSDAFKVFNE 307
Query: 398 MPWKPDVV 405
MP K DVV
Sbjct: 308 MP-KNDVV 314
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 214/397 (53%), Gaps = 5/397 (1%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKA 141
L A ++F S N+ W+ ++ A+ L+ M G P ++T +L A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
CS + L KQ+H+ +LK G LV Y+ +G L DAR FD + R ++L
Sbjct: 332 CSDIC-YLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVAL 390
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
WT+++ GY QN + EAL L+ M G PN T+ASVL AC+ LELG+++H
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI 450
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
G + V +GSAL MY+K G++ +F P ++VV+WN MI GL+ +G ++AL
Sbjct: 451 KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALE 510
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
LFE M EG+ P+DVTF+ ++SAC H G ++ G F M G++PK++HY CMVDL
Sbjct: 511 LFEEMLAEGME-PDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL 569
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVH 441
L R G+L EAKE I+ + + LL A KN G E+ E+++AL +
Sbjct: 570 LSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTY 629
Query: 442 VSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
V LS +Y G +DV R+ K M+ + K G S +
Sbjct: 630 VQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 197/395 (49%), Gaps = 17/395 (4%)
Query: 52 KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIRAQ- 110
+Q HA +V + F D G + ++F+ + + NT+ W+T++
Sbjct: 138 RQAHALVVKMSSFGD--IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 111 -----RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLG 165
+L++ + G+ + F +L + ++ T + + +Q+H +K GL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGS-DSDYVFTAVLSSLAA-TIYVGLGRQIHCITIKNGLL 253
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM 225
++N LV YS L +A +FD R+ W+ MV GY+QN S EA+ LF M
Sbjct: 254 GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
+ G +P+ T+ VL+AC+ LE G+++H F+ G E + +ALV+MYAK G +
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 286 AMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
A ARK FD + ER+V W +I G + E+AL L+ M+ G+ +PND T VL A
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI-IPNDPTMASVLKA 432
Query: 346 CCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDV 404
C L++G+ V ++K +G+E I + + + G L + + + P K DV
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTPNK-DV 489
Query: 405 VILGALLEASKNIGNTEVAKVVTEEILA--LEPDN 437
V A++ + G + A + EE+LA +EPD+
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 157/319 (49%), Gaps = 11/319 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH------PQTALSLYITMRRHGALPGKHTFP 136
G L A IF++I + WN+LI T + L+ MR LP +T
Sbjct: 63 GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122
Query: 137 FLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
+ KA SSL + V +Q HA V+K D +V LV Y +G + D VF +P
Sbjct: 123 GIFKAESSLQSS-TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE 181
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGA--TLASVLSACARSGCLELGE 254
R+ W+TMV GYA EA+ +F + E E + + +VLS+ A + + LG
Sbjct: 182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
+IH G+ V L +ALV MY+K ++ A K+FD +RN +TW+ M+ G + +G
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH 374
+A+ LF M G+ P++ T +GVL+AC L+ G+ + S G E +
Sbjct: 302 ESLEAVKLFSRMFSAGIK-PSEYTIVGVLNACSDICYLEEGKQLH-SFLLKLGFERHLFA 359
Query: 375 YGCMVDLLGRGGKLLEAKE 393
+VD+ + G L +A++
Sbjct: 360 TTALVDMYAKAGCLADARK 378
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 156/363 (42%), Gaps = 43/363 (11%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
+ VH +++ G AN LV Y+ G L A +F+ I + + W +++ GY+QN
Sbjct: 34 RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQN 93
Query: 213 ---FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG- 268
S + LF M A+ PN TLA + A + +G + H + VK G
Sbjct: 94 GGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV-VKMSSFGD 152
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
+ + ++LV MY K G + K+F MPERN TW+ M+ G AT G VE+A+ +F +
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 329 EG-VAVPNDVTFIGVLSACCHGGLLDVGRDVFC---------------SMKTVYGIEPKI 372
E +D F VLS+ + +GR + C ++ T+Y +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 373 EH---------------YGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEAS 414
+ MV + G+ LEA +L M KP + +L A
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 415 KNIGNTEVAKVVTEEILALEPDNH-GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVP 473
+I E K + +L L + H +L +MYA+AG D + ++E + V
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE---RDVA 389
Query: 474 GWS 476
W+
Sbjct: 390 LWT 392
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMAR 289
P+ +TL L+ ++ L G +H + G + + LVN YAK G +A A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHVEDA---LSLFENMEKEGVAVPNDVTFIGVLSA 345
+F+ + ++VV+WN +I G + +G + + + LF M + + +PN T G+ A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI-LPNAYTLAGIFKA 127
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 225/451 (49%), Gaps = 10/451 (2%)
Query: 34 DPPTLAVLADKCTTVEQLK---QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASR 90
D T A+ C + Q+K +H ++V G++
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVT--TLCVANSLATMYTECGEMQDGLC 265
Query: 91 IFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTP 147
+F ++ + + W +LI A + A+ +I MR P + TF + AC+SL+
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 148 ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVC 207
L +Q+H +VL GL V+N +++ YS G+LV A +F + R + W+T++
Sbjct: 326 -LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIG 384
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
GY Q E F M G +P LAS+LS +E G ++H G+E
Sbjct: 385 GYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ 444
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENME 327
+ S+L+NMY+K G+I A +F ++V+ MI G A HG ++A+ LFE
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 328 KEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
K G P+ VTFI VL+AC H G LD+G F M+ Y + P EHYGCMVDLL R G+
Sbjct: 505 KVGFR-PDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGR 563
Query: 388 LLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNM 447
L +A+++I M WK D V+ LL A K G+ E + E IL L+P V+L+N+
Sbjct: 564 LSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANI 623
Query: 448 YAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
Y+ G ++ +RK MK + + K PGWS +
Sbjct: 624 YSSTGNLEEAANVRKNMKAKGVIKEPGWSSI 654
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 166/360 (46%), Gaps = 9/360 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G + + R+FS + N W +I H + L+ + M R L +TF L
Sbjct: 157 GKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIAL 216
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
KAC+ L + K +H HV+ G VAN L Y+ G++ D +F+ + R +
Sbjct: 217 KACAGLRQ-VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT+++ Y + +A+ F M PN T AS+ SACA L GE++H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G+ + + ++++ MY+ G + A LF GM R++++W+ +I G G E+
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
F M + G P D +LS + +++ GR V ++ +G+E ++
Sbjct: 396 FKYFSWMRQSGTK-PTDFALASLLSVSGNMAVIEGGRQVH-ALALCFGLEQNSTVRSSLI 453
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDN 437
++ + G + EA +I G + D+V L A++ G ++ A + E+ L PD+
Sbjct: 454 NMYSKCGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 166/414 (40%), Gaps = 43/414 (10%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMR--RHGALPGKHTFPF 137
G+L A ++F + + W ++I+ + AL L+ MR H P
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
+LKAC + + + +HA+ +K L +V + L+ Y G + + VF E+P R
Sbjct: 114 VLKACGQ-SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+ WT ++ G E L F M + T A L ACA ++ G+ IH
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ V+G + + ++L MY + G + LF+ M ER+VV+W +I G
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
A+ F M V PN+ TF + SAC L G + C++ ++ G+ +
Sbjct: 293 KAVETFIKMRNSQVP-PNEQTFASMFSACASLSRLVWGEQLHCNVLSL-GLNDSLSVSNS 350
Query: 378 MVDLLGRGGKLLEAKELIKGM------PW----------------------------KPD 403
M+ + G L+ A L +GM W KP
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 404 VVILGALLEASKNIGNTEVAKVVTEEILALE-PDNHGVHVSLSNMYAEAGEWQD 456
L +LL S N+ E + V L N V SL NMY++ G ++
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKE 464
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM--VAEG 229
N +R +G+L AR VFD++P + WT+++ Y S+EAL LF M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMAR 289
P+ + L+ VL AC +S + GE +H + + V +GS+L++MY + G I +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
++F MP RN VTW +I GL G ++ L+ F M + + + TF L AC
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSE-ELSDTYTFAIALKACAGL 222
Query: 350 GLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGA 409
+ G+ + + V G + + + G++ + L + M + DVV +
Sbjct: 223 RQVKYGKAIHTHV-IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTS 280
Query: 410 LLEASKNIGNTEVAKVVT 427
L+ A K IG EV V T
Sbjct: 281 LIVAYKRIGQ-EVKAVET 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 283 GAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGV 342
G + AR++FD MP ++V+W +I T + ++AL LF M AV D + + V
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 343 -LSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW 400
L AC + G + ++KT + + ++D+ R GK+ ++ + MP+
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKT--SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 401 KPDVV---ILGALLEA---------------SKNIGNTEVAKVVTEEILALEPDNHG--- 439
+ V I+ L+ A S+ + +T + + L +G
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 440 -VHV-------------SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
HV SL+ MY E GE QD L L + M E + V W+
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE---RDVVSWT 279
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 221/399 (55%), Gaps = 8/399 (2%)
Query: 85 LTHASRIFSSIHQPNTFM--WNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
L A +F + P + W ++ A P AL ++ MR+ P +L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
A + L L + +HA V+K GL ++ + L Y+ G + A+ +FD++ S +L
Sbjct: 230 NAFTCLQD-LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNL 288
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
LW M+ GYA+N + EA+ +F M+ + P+ ++ S +SACA+ G LE ++E+
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY 348
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ V + SAL++M+AK G++ AR +FD +R+VV W+ MI G HG +A
Sbjct: 349 VGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+SL+ ME+ GV PNDVTF+G+L AC H G++ G F M + I P+ +HY C++
Sbjct: 409 ISLYRAMERGGVH-PNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVI 466
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLLGR G L +A E+IK MP +P V + GALL A K + E+ + +++ +++P N G
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG 526
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V LSN+YA A W V +R MKE+ L K G S V
Sbjct: 527 HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 189/380 (49%), Gaps = 15/380 (3%)
Query: 39 AVLADKCTTVEQLKQVHAQMVVTA-RFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQ 97
A L D T QLKQ+HA+++V +F+ GD+T A ++F + +
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSF---GDITFARQVFDDLPR 81
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
P F WN +IR H Q AL +Y M+ P TFP LLKACS L+ L + +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS-HLQMGRF 140
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD--EIPSRSLSLWTTMVCGYAQN 212
VHA V + G D V NGL+ Y+ L AR VF+ +P R++ WT +V YAQN
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
EAL +F M +P+ L SVL+A L+ G IH + G+E+ L
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
+L MYAK G +A A+ LFD M N++ WN MI G A +G+ +A+ +F M + V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
P+ ++ +SAC G L+ R ++ + ++ Y + I ++D+ + G +E
Sbjct: 321 -PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGS-VEG 376
Query: 392 KELIKGMPWKPDVVILGALL 411
L+ DVV+ A++
Sbjct: 377 ARLVFDRTLDRDVVVWSAMI 396
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 161/358 (44%), Gaps = 38/358 (10%)
Query: 131 GKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFV 190
G H+ F S T + KQ+HA +L GL + L+ S GD+ AR V
Sbjct: 17 GIHSDSFYASLIDSATHKAQL-KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 191 FDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL 250
FD++P + W ++ GY++N +AL ++ M P+ T +L AC+ L
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 251 ELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDG--MPERNVVTWNGMIC 308
++G +H + G + V + + L+ +YAK + AR +F+G +PER +V+W ++
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 309 GLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA-----------CCHGGLLDVG-- 355
A +G +AL +F M K V P+ V + VL+A H ++ +G
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVK-PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 356 --RDVFCSMKTVYG---------------IEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
D+ S+ T+Y P + + M+ + G EA ++ M
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 399 PWK---PDVVILGALLEASKNIGNTEVAKVVTEEI-LALEPDNHGVHVSLSNMYAEAG 452
K PD + + + + A +G+ E A+ + E + + D+ + +L +M+A+ G
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 216/399 (54%), Gaps = 8/399 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLL 139
GD+++A R+F+ + MW +I H + ALSL+ M+ P T +L
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C L L + + VH +K G+ D++VAN LV Y+ DA++VF+ + +
Sbjct: 351 SGCG-LIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 408
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +++ G++QN +EAL LF M +E PNG T+AS+ SACA G L +G +H +
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468
Query: 260 MRVKG--VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
G V +G+AL++ YAK G AR +FD + E+N +TW+ MI G G
Sbjct: 469 SVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+L LFE M K+ PN+ TF +LSAC H G+++ G+ F SM Y P +HY C
Sbjct: 529 GSLELFEEMLKKQQK-PNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTC 587
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
MVD+L R G+L +A ++I+ MP +PDV GA L ++ ++V +++L L PD+
Sbjct: 588 MVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDD 647
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
+V +SN+YA G W +R MK+ L K+ G S
Sbjct: 648 ASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 166/336 (49%), Gaps = 18/336 (5%)
Query: 32 RQDPPTLAVLADKCTTVEQL---KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHA 88
R D + CT ++ L K++H Q+V F++ G++ A
Sbjct: 139 RYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN---VVLTGLLDMYAKCGEIKSA 195
Query: 89 SRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
++F+ I N W ++I + L L+ MR + L ++T+ L+ AC+ L
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
+ AL K H ++K G+ L S + L+ Y GD+ +AR VF+E L +WT M
Sbjct: 256 S-ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAM 314
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV 265
+ GY N NEAL+LF+ M +PN T+ASVLS C LELG +H +
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL----SI 370
Query: 266 EVGVI---LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
+VG+ + +ALV+MYAK A+ +F+ E+++V WN +I G + +G + +AL L
Sbjct: 371 KVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFL 430
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
F M E V PN VT + SAC G L VG +
Sbjct: 431 FHRMNSESVT-PNGVTVASLFSACASLGSLAVGSSL 465
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 10/323 (3%)
Query: 40 VLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPN 99
+L KCT ++ L+Q H + D G A +F I +P+
Sbjct: 49 LLLSKCTNIDSLRQSHGVLTGNGLMGD--ISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 100 TFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVH 156
++W ++R + + LY + +HG F LKAC+ L L K++H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD-LDNGKKIH 165
Query: 157 AHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSN 216
++K D+ V GL+ Y+ G++ A VF++I R++ WT+M+ GY +N
Sbjct: 166 CQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
E L LF M N T +++ AC + L G+ H + G+E+ L ++L+
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 277 NMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV-PN 335
+MY K G I+ AR++F+ ++V W MI G +G V +ALSLF+ M +GV + PN
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM--KGVEIKPN 342
Query: 336 DVTFIGVLSACCHGGLLDVGRDV 358
VT VLS C L++GR V
Sbjct: 343 CVTIASVLSGCGLIENLELGRSV 365
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 223/399 (55%), Gaps = 8/399 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA----QRHPQTALSLYITMRRHGALPGKHTFPFL 138
G + A ++F I N+ +W L++ + P+ L+ MR G T L
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV-FRLFCLMRDTGLALDALTLICL 216
Query: 139 LKACSSLTPALPVHKQVHA-HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
+KAC ++ A V K VH + + + ++ ++ Y L +AR +F+ R
Sbjct: 217 VKACGNVF-AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
++ +WTT++ G+A+ + EA LF M+ E PN TLA++L +C+ G L G+ +H
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+M G+E+ + ++ ++MYA+ G I MAR +FD MPERNV++W+ MI +G E
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+AL F M+ + V VPN VTF+ +LSAC H G + G F SM YG+ P+ EHY C
Sbjct: 396 EALDCFHKMKSQNV-VPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC 454
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
MVDLLGR G++ EAK I MP KP GALL A + ++A + E++L++EP+
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEK 514
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
V+V LSN+YA+AG W+ V +R+ M + +K G S
Sbjct: 515 SSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 172/384 (44%), Gaps = 14/384 (3%)
Query: 38 LAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSI-- 95
L + + T+ +QVHA++++ F D L A+ F+ I
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHG-FEDEVVLGSSLTNAYIQS-NRLDFATSSFNRIPC 67
Query: 96 HQPNTFMWNTLIRAQRHPQT-----ALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
+ N WNT++ +T L LY MRRH F +KAC L L
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL-GLLE 126
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYA 210
+H +K GL D +VA LV Y+ G + A+ VFDEIP R+ LW ++ GY
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF-MRVKGVEVGV 269
+ E LF M G + TL ++ AC ++G+ +H +R ++
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE 329
L +++++MY K + ARKLF+ +RNVV W +I G A +A LF M +E
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 330 GVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLL 389
+ +PN T +L +C G L G+ V M GIE ++ +D+ R G +
Sbjct: 307 SI-LPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEMDAVNFTSFIDMYARCGNIQ 364
Query: 390 EAKELIKGMPWKPDVVILGALLEA 413
A+ + MP + +V+ +++ A
Sbjct: 365 MARTVFDMMP-ERNVISWSSMINA 387
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/414 (36%), Positives = 228/414 (55%), Gaps = 37/414 (8%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR----------AQRH----PQTALSLYITMRRHGA 128
G + A+++F + + N +W ++I A+R+ P+ + L+ TM
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTM----- 96
Query: 129 LPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDAR 188
+ G +L+A SL +P D N ++ Y+ GD+
Sbjct: 97 ISGYIEMGNMLEA-RSLFDQMPCR--------------DVMSWNTVLEGYANIGDMEACE 141
Query: 189 FVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARS 247
VFD++P R++ W ++ GYAQN +E L F+ MV EG PN AT+ VLSACA+
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 248 GCLELGERIHEFMRVKGV-EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
G + G+ +H++ G +V V + +AL++MY K GAI +A ++F G+ R++++WN M
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTM 261
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
I GLA HGH +AL+LF M+ G++ P+ VTF+GVL AC H GL++ G F SM T +
Sbjct: 262 INGLAAHGHGTEALNLFHEMKNSGIS-PDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVV 426
I P+IEH GC+VDLL R G L +A E I MP K D VI LL ASK ++ +V
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 427 TEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVTT 480
EE++ LEP N V LSN+Y +AG + D RL+ M++ KK G S + T
Sbjct: 381 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIET 434
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 238/455 (52%), Gaps = 24/455 (5%)
Query: 37 TLAVLADKCTTVEQLK---QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
T ++ CT K +H+ +VV FN H G L A ++F
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHS-LVVKCGFN-HDVAAMTSLLSIYSGSGRLNDAHKLFD 170
Query: 94 SIHQPNTFMWNTLIRAQ----RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPAL 149
I + W L RH + A+ L+ M G P + +L AC + L
Sbjct: 171 EIPDRSVVTWTALFSGYTTSGRHRE-AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD-L 228
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGY 209
+ + ++ + + +S V LV Y+ G + AR VFD + + + W+TM+ GY
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE------RIHEFMRVK 263
A N E + LF M+ E +P+ ++ LS+CA G L+LGE HEF+
Sbjct: 289 ASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL--- 345
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
+ + +AL++MYAK GA+A ++F M E+++V N I GLA +GHV+ + ++F
Sbjct: 346 ---TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
EK G++ P+ TF+G+L C H GL+ G F ++ VY ++ +EHYGCMVDL G
Sbjct: 403 GQTEKLGIS-PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVS 443
R G L +A LI MP +P+ ++ GALL + + +T++A+ V +E++ALEP N G +V
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 444 LSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LSN+Y+ G W + +R M ++ +KK+PG+S +
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 204/419 (48%), Gaps = 12/419 (2%)
Query: 47 TVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTL 106
TV LKQ+H ++ H ++ +FS PN F++N+L
Sbjct: 25 TVNHLKQIHVSLI--NHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSL 82
Query: 107 IRA--QRHP-QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFG 163
I H L L++++R+HG TFP +LKAC+ + + +H+ V+K G
Sbjct: 83 INGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR-ASSRKLGIDLHSLVVKCG 141
Query: 164 LGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFE 223
D L+ YS SG L DA +FDEIP RS+ WT + GY + EA+ LF+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 224 GMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNG 283
MV G +P+ + VLSAC G L+ GE I ++M ++ + + LVN+YAK G
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 284 AIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
+ AR +FD M E+++VTW+ MI G A++ ++ + LF M +E + P+ + +G L
Sbjct: 262 KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK-PDQFSIVGFL 320
Query: 344 SACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPD 403
S+C G LD+G + S+ + + ++D+ + G + E+ K M K D
Sbjct: 321 SSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK-D 378
Query: 404 VVILGALLEASKNIGNTEVAKVV--TEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRL 460
+VI+ A + G+ +++ V E L + PD + L AG QD LR
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG-STFLGLLCGCVHAGLIQDGLRF 436
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 224/398 (56%), Gaps = 8/398 (2%)
Query: 85 LTHASRIFSSIHQP-NTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLK 140
L+ A ++F I + N WNT+++ + + L+ ++ G + ++
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
+CS + L + K +H +V+K L L V N L+ Y GDL A +F E + ++
Sbjct: 442 SCSHIGAVL-LGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVIT 500
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W M+ Y S +A+ALF+ MV+E F+P+ TL ++L AC +G LE G+ IH ++
Sbjct: 501 -WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYI 559
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
E+ + L +AL++MYAK G + +R+LFD +++ V WN MI G HG VE A+
Sbjct: 560 TETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAI 619
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+LF+ ME+ V P TF+ +LSAC H GL++ G+ +F M Y ++P ++HY C+VD
Sbjct: 620 ALFDQMEESDVK-PTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVD 677
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
LL R G L EA+ + MP+ PD VI G LL + G E+ + E +A +P N G
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY 737
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++ L+NMY+ AG+W++ R R+ M+E + K G S+V
Sbjct: 738 YIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 143/300 (47%), Gaps = 12/300 (4%)
Query: 40 VLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPN 99
+L D+ ++E L++ H +++T +++ G +SR+F + + +
Sbjct: 32 ILCDQSLSLESLRK-HNALIITGGLSENIFVASKLISSYASY-GKPNLSSRVFHLVTRRD 89
Query: 100 TFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVH 156
F+WN++I+A +L + +M G P T P ++ AC+ L V VH
Sbjct: 90 IFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELL-WFHVGTFVH 148
Query: 157 AHVLKFGLGLDSHVANG--LVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
VLK G G D + A G V YS G L DA VFDE+P R + WT ++ G+ QN
Sbjct: 149 GLVLKHG-GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 215 SNEALALFEGMVAEGFE---PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVIL 271
S L M + G + PN TL AC+ G L+ G +H F G+ +
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV 267
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
S++ + Y+K+G + A F + + ++ +W +I LA G +E++ +F M+ +G+
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 170/411 (41%), Gaps = 44/411 (10%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQ-RHPQTALSLYITMRRHGA-----LPGKHTFP 136
G L A +F + + W +I ++ ++ L + H A P T
Sbjct: 175 GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLE 234
Query: 137 FLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
+ACS+L AL + +H +K GL V + + YS SG+ +A F E+
Sbjct: 235 CGFQACSNL-GALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD 293
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
+ WT+++ A++ E+ +F M +G P+G ++ +++ + + G+
Sbjct: 294 EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAF 353
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGH 315
H F+ + + ++L++MY K +++A KLF + E N WN M+ G
Sbjct: 354 HGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKC 413
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
+ LF ++ G+ + + + V+S+C H G + +G+ + C + ++ I
Sbjct: 414 HVKCIELFRKIQNLGIEI-DSASATSVISSCSHIGAVLLGKSLHCYVVKT-SLDLTISVV 471
Query: 376 GCMVDLLGRGGKLLEAKELI-----KGMPW----------------------------KP 402
++DL G+ G L A + + W KP
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKP 531
Query: 403 DVVILGALLEASKNIGNTEVAKVVTEEILALEPD-NHGVHVSLSNMYAEAG 452
+ L LL A N G+ E +++ I E + N + +L +MYA+ G
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 242/466 (51%), Gaps = 26/466 (5%)
Query: 34 DPPTLAVLADKCTTVEQL---KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASR 90
D T++ + C+ +E L K++HA + +++ L+ R
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS-GRR 359
Query: 91 IFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRH-GALPGKHTFPFLLKACSSLT 146
+F + +WN +I H + AL L+I M G L T ++ AC +
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR-S 418
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
A + +H V+K GL D V N L+ YS G + A +F ++ R L W TM+
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 207 CGYAQNFCSNEALALFEGM------VAEG-----FEPNGATLASVLSACARSGCLELGER 255
GY + +AL L M V++G +PN TL ++L +CA L G+
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
IH + + V +GSALV+MYAK G + M+RK+FD +P++NV+TWN +I HG+
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
++A+ L M +GV PN+VTFI V +AC H G++D G +F MK YG+EP +HY
Sbjct: 599 GQEAIDLLRMMMVQGVK-PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 657
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGA---LLEASKNIGNTEVAKVVTEEILA 432
C+VDLLGR G++ EA +L+ MP D GA LL AS+ N E+ ++ + ++
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMP--RDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 715
Query: 433 LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LEP+ +V L+N+Y+ AG W +R+ MKE+ ++K PG S +
Sbjct: 716 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 148/322 (45%), Gaps = 9/322 (2%)
Query: 35 PPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSS 94
P L +AD +E KQ+HA V + GD ++F
Sbjct: 101 PALLKAVAD-LQDMELGKQIHAH-VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 95 IHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLT--PAL 149
I + N WN+LI + + AL + M P T ++ ACS+L L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGY 209
+ KQVHA+ L+ G L+S + N LV Y G L ++ + R L W T++
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG-VEVG 268
QN EAL MV EG EP+ T++SVL AC+ L G+ +H + G ++
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
+GSALV+MY + R++FDGM +R + WN MI G + + H ++AL LF ME+
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 329 EGVAVPNDVTFIGVLSACCHGG 350
+ N T GV+ AC G
Sbjct: 398 SAGLLANSTTMAGVVPACVRSG 419
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 18/307 (5%)
Query: 103 WNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
W L+R++ + A+ Y+ M G P + FP LLKA + L + + KQ+HAHV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD-MELGKQIHAHV 123
Query: 160 LKFGLGLDS-HVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNE- 217
KFG G+DS VAN LV Y GD VFD I R+ W +++ + CS E
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI----SSLCSFEK 179
Query: 218 ---ALALFEGMVAEGFEPNGATLASVLSACAR---SGCLELGERIHEFMRVKGVEVGVIL 271
AL F M+ E EP+ TL SV++AC+ L +G+++H + KG E+ +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 238
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+ LV MY K G +A ++ L R++VTWN ++ L + + +AL M EGV
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
P++ T VL AC H +L G+++ ++ +VD+ ++L
Sbjct: 299 E-PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 392 KELIKGM 398
+ + GM
Sbjct: 358 RRVFDGM 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
SRS W ++ ++ EA+ + M+ G +P+ ++L A A +ELG++
Sbjct: 59 SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 256 IHEFMRVKGVEV-GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
IH + G V V + + LVN+Y K G K+FD + ERN V+WN +I L +
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH----GGLLDVGRDVFCSMKTVYGIEP 370
E AL F M E V P+ T + V++AC + GL+ +G+ V YG+
Sbjct: 179 KWEMALEAFRCMLDENVE-PSSFTLVSVVTACSNLPMPEGLM-MGKQVH-----AYGLRK 231
Query: 371 -KIEHY--GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVT 427
++ + +V + G+ GKL +K L+ + V L +N E + +
Sbjct: 232 GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 428 EEIL-ALEPDNHGV 440
E +L +EPD +
Sbjct: 292 EMVLEGVEPDEFTI 305
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 212/392 (54%), Gaps = 5/392 (1%)
Query: 90 RIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLT 146
R+F + + + +NT+I + AL + M P T +L S
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
+ K++H +V++ G+ D ++ + LV Y+ S + D+ VF + R W ++V
Sbjct: 257 DVIK-GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
GY QN NEAL LF MV +P +SV+ ACA L LG+++H ++ G
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
+ + SALV+MY+K G I ARK+FD M + V+W +I G A HGH +A+SLFE M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
+++GV PN V F+ VL+AC H GL+D F SM VYG+ ++EHY + DLLGR G
Sbjct: 436 KRQGVK-PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 387 KLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSN 446
KL EA I M +P + LL + N E+A+ V E+I ++ +N G +V + N
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Query: 447 MYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
MYA G W+++ +LR M+++ L+K P S +
Sbjct: 555 MYASNGRWKEMAKLRLRMRKKGLRKKPACSWI 586
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 170/388 (43%), Gaps = 45/388 (11%)
Query: 50 QLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIRA 109
Q KQ+HAQ + T + L A +F ++ P W ++IR
Sbjct: 23 QAKQLHAQFIRTQSLSH---TSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79
Query: 110 ---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGL 166
Q AL+ ++ MR G P + FP +LK+C+ + L + VH +++ G+
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD-LRFGESVHGFIVRLGMDC 138
Query: 167 DSHVANGLVRCY-----------------------SVSGD-------------LVDARFV 190
D + N L+ Y S SGD + R V
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 191 FDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL 250
F+ +P + + + T++ GYAQ+ +AL + M +P+ TL+SVL + +
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 251 ELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGL 310
G+ IH ++ KG++ V +GS+LV+MYAK+ I + ++F + R+ ++WN ++ G
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
+G +AL LF M V P V F V+ AC H L +G+ + + G
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVK-PGAVAFSSVIPACAHLATLHLGKQLHGYV-LRGGFGS 376
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGM 398
I +VD+ + G + A+++ M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRM 404
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 228/420 (54%), Gaps = 31/420 (7%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQT-----ALSLYITMRRHGALPGKHTFPFLL 139
L A R+F + + + WN +I A H Q L L+++M R P + TF +L
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAA--HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG-----DLVDARFV---- 190
KAC+ +L ++H+ ++K G+ +S V L+ YS G + + +RF
Sbjct: 491 KACTG--GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Query: 191 -------FDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLAS 239
+++ ++ L W +++ GY S +A LF M+ G P+ T A+
Sbjct: 549 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 608
Query: 240 VLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN 299
VL CA LG++IH + K ++ V + S LV+MY+K G + +R +F+ R+
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 668
Query: 300 VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF 359
VTWN MICG A HG E+A+ LFE M E + PN VTFI +L AC H GL+D G + F
Sbjct: 669 FVTWNAMICGYAHHGKGEEAIQLFERMILENIK-PNHVTFISILRACAHMGLIDKGLEYF 727
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEA-SKNIG 418
MK YG++P++ HY MVD+LG+ GK+ A ELI+ MP++ D VI LL + +
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787
Query: 419 NTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
N EVA+ T +L L+P + + LSN+YA+AG W+ V LR+ M+ +LKK PG S V
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 152/309 (49%), Gaps = 9/309 (2%)
Query: 90 RIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLT 146
R+F I + N+ W+ +I AL + M++ A + + +L++C++L+
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
L + Q+HAH LK D V + Y+ ++ DA+ +FD + + + M+
Sbjct: 296 E-LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
GY+Q +AL LF +++ G + +L+ V ACA L G +I+ +
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
+ V + +A ++MY K A+A A ++FD M R+ V+WN +I +G + L LF +M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC-MVDLLGRG 385
+ + P++ TF +L AC GG L G ++ S+ V GC ++D+ +
Sbjct: 475 LRSRIE-PDEFTFGSILKACT-GGSLGYGMEIHSSI--VKSGMASNSSVGCSLIDMYSKC 530
Query: 386 GKLLEAKEL 394
G + EA+++
Sbjct: 531 GMIEEAEKI 539
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 33/244 (13%)
Query: 134 TFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
F F+ K C+ AL + KQ HAH++ G + V N L++ Y+ S D V A VFD+
Sbjct: 50 NFSFVFKECAK-QGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 194 IPSRSLSLWTTMVCGYA-------------------------------QNFCSNEALALF 222
+P R + W M+ GY+ QN S +++ +F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 223 EGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKN 282
M EG E +G T A +L C+ LG +IH + G + V+ SAL++MYAK
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 283 GAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGV 342
+ ++F G+PE+N V+W+ +I G + + AL F+ M+K V + + V
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASV 287
Query: 343 LSAC 346
L +C
Sbjct: 288 LRSC 291
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 9/339 (2%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALS---LYITMRRHGALPGKHTFPFLLK 140
D+ A+ F+ + + WN+++ +L +++ M R G TF +LK
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
CS L + Q+H V++ G D A+ L+ Y+ V++ VF IP ++
Sbjct: 189 VCSFLEDT-SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W+ ++ G QN + AL F+ M + + ASVL +CA L LG ++H
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
I+ +A ++MYAK + A+ LFD N ++N MI G + H AL
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYGIEPKIEHYGCMV 379
LF + G+ ++++ GV AC L G ++ ++K+ ++ + + +
Sbjct: 368 LLFHRLMSSGLGF-DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--I 424
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIG 418
D+ G+ L EA + M + D V A++ A + G
Sbjct: 425 DMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 240 VLSACARSGCLELGERIHEFMRVKGVE-------------------------------VG 268
V CA+ G LELG++ H M + G
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
V+ + ++N Y+K+ + A F+ MP R+VV+WN M+ G +G ++ +F +M +
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKL 388
EG+ + TF +L C +G + + V G + + ++D+ +G +
Sbjct: 174 EGIEF-DGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GCDTDVVAASALLDMYAKGKRF 231
Query: 389 LEAKELIKGMPWKPDV 404
+E+ + +G+P K V
Sbjct: 232 VESLRVFQGIPEKNSV 247
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 229/434 (52%), Gaps = 41/434 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQ-RHP--QTALSLYITMRRHGALPGKHTFPFLL 139
G L++A ++F + +P +N +I +H + L L M G +T +L
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 140 KACSSL--TPALP--VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
KA +S T LP + + VHA ++K + LD + LV Y SG L AR VF+ +
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 196 SRSLSLWTTMVCGYA-QNFCSN-------------------------------EALALFE 223
++ T+M+ GY Q F + ++ ++
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 224 GMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNG 283
M GF PN +T ASV+ AC+ E+G+++H + GV + +GS+L++MYAK G
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 284 AIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
I AR++FD M E+NV +W MI G +G+ E+AL LF M KE PN VTF+G L
Sbjct: 323 GINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM-KEFRIEPNYVTFLGAL 381
Query: 344 SACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPD 403
SAC H GL+D G ++F SM+ Y ++PK+EHY C+VDL+GR G L +A E + MP +PD
Sbjct: 382 SACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPD 441
Query: 404 VVILGALLEASKNIGNTEVAKVVTEEILALEPDNH-GVHVSLSNMYAEAGEWQDVLRLRK 462
I ALL + GN E+A + E+ L D G +++LSN+YA +W +V ++R+
Sbjct: 442 SDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIRE 501
Query: 463 TMKEERLKKVPGWS 476
MK R+ K G S
Sbjct: 502 VMKRRRISKTIGRS 515
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 58/349 (16%)
Query: 129 LPGKH--TFPFLLKACSSLTPA------LPVH---------KQVHAHVLKFGLGLDSHVA 171
LP H TFP L + SSL+PA L H K++HA ++K G D +++
Sbjct: 14 LPSNHYSTFP-LKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNIS 72
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
L+ + G L AR VFDE+P +LS + M+ GY ++ E L L + M G +
Sbjct: 73 IKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEK 132
Query: 232 PNGATLASVLSACARSGCLELGER-----IHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
+G TL+ VL A G + R +H + VE+ +L +ALV+ Y K+G +
Sbjct: 133 ADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLE 192
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV------------- 333
AR +F+ M + NVV MI G G VEDA +F + + + V
Sbjct: 193 SARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGE 252
Query: 334 ------------------PNDVTFIGVLSACCHGGLLDVGRDVFCS-MKTVYGIEPKIEH 374
PN TF V+ AC +VG+ V MK+ G+ I+
Sbjct: 253 TAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS--GVYTHIKM 310
Query: 375 YGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
++D+ + G + +A+ + M K +V ++++ GN E A
Sbjct: 311 GSSLLDMYAKCGGINDARRVFDQMQEK-NVFSWTSMIDGYGKNGNPEEA 358
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 238/450 (52%), Gaps = 12/450 (2%)
Query: 36 PTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSI 95
P L +L D LKQVHA+++ H G ++ A R+F +
Sbjct: 208 PLLTLLDDP-MFCNLLKQVHAKVLKLGL--QHEITICNAMISSYADCGSVSDAKRVFDGL 264
Query: 96 HQPNTFM-WNTLIRA-QRH--PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
+ WN++I +H ++A L+I M+RH +T+ LL ACS +
Sbjct: 265 GGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI-F 323
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSV--SGDLVDARFVFDEIPSRSLSLWTTMVCGY 209
K +H V+K GL + N L+ Y +G + DA +F+ + S+ L W +++ G+
Sbjct: 324 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGF 383
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
AQ S +A+ F + + + + +++L +C+ L+LG++IH G
Sbjct: 384 AQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE 443
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHVEDALSLFENMEK 328
+ S+L+ MY+K G I ARK F + + + V WN MI G A HG + +L LF M
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKL 388
+ V + + VTF +L+AC H GL+ G ++ M+ VY I+P++EHY VDLLGR G +
Sbjct: 504 QNVKL-DHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLV 562
Query: 389 LEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMY 448
+AKELI+ MP PD ++L L + G E+A V +L +EP++H +VSLS+MY
Sbjct: 563 NKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMY 622
Query: 449 AEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++ +W++ ++K MKE +KKVPGWS +
Sbjct: 623 SDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 15/263 (5%)
Query: 156 HAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS 215
H + +K G D +V+N ++ Y G L A +FDE+P R W TM+ GY
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
+A LF M G + +G + + +L A +LGE++H + G E V +GS+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 276 VNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPN 335
V+MYAK + A + F + E N V+WN +I G ++ A L ME + +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 336 DVTFIGVLSACCHGGLLDVGRDVFCS-MKTVY------GIEPKIEHYGCMVDLLGRGGKL 388
TF +L+ LLD +FC+ +K V+ G++ +I M+ G +
Sbjct: 203 AGTFAPLLT------LLD--DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 389 LEAKELIKGMPWKPDVVILGALL 411
+AK + G+ D++ +++
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMI 277
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 7/269 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
G L +A+ +F + + ++ WNT+I + A L+ M+R G+ ++F LL
Sbjct: 49 GFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLL 108
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
K +S+ + +QVH V+K G + +V + LV Y+ + DA F EI +
Sbjct: 109 KGIASV-KRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNS 167
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGM-VAEGFEPNGATLASVLSACARSGCLELGERIHE 258
W ++ G+ Q A L M + + T A +L+ L +++H
Sbjct: 168 VSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHA 227
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM-PERNVVTWNGMICGLATHGHVE 317
+ G++ + + +A+++ YA G+++ A+++FDG+ +++++WN MI G + H E
Sbjct: 228 KVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKE 287
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSAC 346
A LF M++ V + T+ G+LSAC
Sbjct: 288 SAFELFIQMQRHWVET-DIYTYTGLLSAC 315
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 219/402 (54%), Gaps = 7/402 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ RIFSSI QP+ WN ++ H + A+S + M+ P K T +L
Sbjct: 364 GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 423
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE-IPSRS 198
+C+ L L KQ+H V++ + +SH+ +GL+ YS + + +FD+ I
Sbjct: 424 SSCARLR-FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD 482
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERIH 257
++ W +M+ G+ N +AL LF M PN + A+VLS+C+R L G + H
Sbjct: 483 IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFH 542
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G + +AL +MY K G I AR+ FD + +N V WN MI G +G +
Sbjct: 543 GLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGD 602
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+A+ L+ M G P+ +TF+ VL+AC H GL++ G ++ SM+ ++GIEP+++HY C
Sbjct: 603 EAVGLYRKMISSG-EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYIC 661
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
+VD LGR G+L +A++L + P+K V+ LL + + G+ +A+ V E+++ L+P +
Sbjct: 662 IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQS 721
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVT 479
+V LSN Y+ +W D L+ M + R+ K PG S T
Sbjct: 722 SAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTT 763
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 172/385 (44%), Gaps = 24/385 (6%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
GDL A +F + + + WN +I + + AL +Y M G LP + T +L
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF-VFDEIPSRS 198
ACS + + + H +K GL + V N L+ Y+ G +VD VF+ + +
Sbjct: 146 SACSKVLDGV-FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA-RSGC-------- 249
+T ++ G A+ EA+ +F M +G + + L+++LS A R GC
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
ELG++IH G + L ++L+ +YAKN + A +F MPE NVV+WN MI G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
+ ++ M G PN+VT I VL AC G ++ GR +F S+ +
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQ-PNEVTCISVLGACFRSGDVETGRRIFSSIP-----Q 378
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPW---KPDVVILGALLEASKNIGNTEVAKVV 426
P + + M+ EA + M + KPD L +L + + E K +
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Query: 427 TEEILALE-PDNHGVHVSLSNMYAE 450
++ E N + L +Y+E
Sbjct: 439 HGVVIRTEISKNSHIVSGLIAVYSE 463
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 138/327 (42%), Gaps = 43/327 (13%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
D+ A IF+ + + N WN +I + ++ MR G P + T +L
Sbjct: 299 DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
AC SGD+ R +F IP S+S
Sbjct: 359 ACFR------------------------------------SGDVETGRRIFSSIPQPSVS 382
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W M+ GY+ EA++ F M + +P+ TL+ +LS+CAR LE G++IH +
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDG-MPERNVVTWNGMICGLATHGHVEDA 319
+ + S L+ +Y++ + ++ +FD + E ++ WN MI G + A
Sbjct: 443 IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKA 502
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYGIEPKIEHYGCM 378
L LF M + V PN+ +F VLS+C L GR +K+ Y + +E +
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET--AL 560
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVV 405
D+ + G++ A++ + K V+
Sbjct: 561 TDMYCKCGEIDSARQFFDAVLRKNTVI 587
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
+A + K G + A ++FDGMPER+VV+WN MI L G E AL +++ M +G
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF- 134
Query: 333 VPNDVTFIGVLSAC-----------CHGGLLDVGRD--VF-----------CSMKTVYGI 368
+P+ T VLSAC CHG + G D +F C YG+
Sbjct: 135 LPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGV 194
Query: 369 -------EPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKP---DVVILGALLEAS 414
+P Y ++ L R K+LEA ++ + M K D V L +L S
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 221/401 (55%), Gaps = 7/401 (1%)
Query: 83 GDLTHASRIFSSIHQPN--TFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPF 137
G + A ++F Q + + +N LI A A ++ M+ G T
Sbjct: 102 GLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLG 161
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
L+ C+ + L + + +H +K GL + V N + Y G + R +FDE+P +
Sbjct: 162 LVPLCT-VPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVK 220
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
L W ++ GY+QN + + L L+E M + G P+ TL SVLS+CA G ++G +
Sbjct: 221 GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVG 280
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ + G V + +A ++MYA+ G +A AR +FD MP +++V+W MI HG E
Sbjct: 281 KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGE 340
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
L LF++M K G+ P+ F+ VLSAC H GL D G ++F +MK Y +EP EHY C
Sbjct: 341 IGLMLFDDMIKRGIR-PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC 399
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
+VDLLGR G+L EA E I+ MP +PD + GALL A K N ++A++ +++ EP+N
Sbjct: 400 LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNN 459
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G +V +SN+Y+++ + + R+R M+E +K PG+S V
Sbjct: 460 IGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 188/380 (49%), Gaps = 15/380 (3%)
Query: 103 WNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH-KQVHAH 158
WN +R Q ++SLY +M R G+ P +FPF+LK+C+SL+ LPV +Q+H H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLS--LPVSGQQLHCH 78
Query: 159 VLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP-SRSLSL-WTTMVCGYAQNFCSN 216
V K G + V L+ Y G + DAR VF+E P S LS+ + ++ GY N
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
+A +F M G + T+ ++ C L LG +H G++ V + ++ +
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 277 NMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPND 336
MY K G++ R+LFD MP + ++TWN +I G + +G D L L+E M+ GV P+
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC-PDP 257
Query: 337 VTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
T + VLS+C H G +G +V + G P + + + R G L +A+ +
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 397 GMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVHVSLSNMYAEAGEW 454
MP K +V A++ G E+ ++ ++++ + PD V V + + + +G
Sbjct: 317 IMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG-AVFVMVLSACSHSGLT 374
Query: 455 QDVLRLRKTMKEERLKKVPG 474
L L + MK E K PG
Sbjct: 375 DKGLELFRAMKRE-YKLEPG 393
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 200/350 (57%), Gaps = 11/350 (3%)
Query: 137 FLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
F +K S+ + +Q+HA V K G + LV YS GD+ AR VFDE P
Sbjct: 69 FAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPE 128
Query: 197 R-SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
+ ++ LWT M+ Y +N S EA+ LF+ M AE E +G + LSACA G +++GE
Sbjct: 129 KQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEE 188
Query: 256 IHE--FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
I+ R + + + + L ++L+NMY K+G ARKLFD ++V T+ MI G A +
Sbjct: 189 IYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALN 248
Query: 314 GHVEDALSLFENME-----KEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGI 368
G +++L LF+ M+ ++ V PNDVTFIGVL AC H GL++ G+ F SM Y +
Sbjct: 249 GQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNL 308
Query: 369 EPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE 428
+P+ H+GCMVDL R G L +A E I MP KP+ VI LL A GN E+ + V
Sbjct: 309 KPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQR 368
Query: 429 EILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
I L+ D+ G +V+LSN+YA G W + ++R +++ R+ PG S +
Sbjct: 369 RIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWI 415
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 240/453 (52%), Gaps = 12/453 (2%)
Query: 34 DPPTLAVLADKCTTVEQL---KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASR 90
D LA CT V L KQVH V D G + A +
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGL--DRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 91 IFSSIHQPNTFMWNTLI--RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPA 148
+FSS+ + + N LI +Q + + A+ L+ M G P + TF +++AC +
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHK-PES 644
Query: 149 LPVHKQVHAHVLKFGLGLD-SHVANGLVRCYSVSGDLVDARFVFDEIPS-RSLSLWTTMV 206
L + Q H + K G + ++ L+ Y S + +A +F E+ S +S+ LWT M+
Sbjct: 645 LTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
G++QN EAL ++ M +G P+ AT +VL C+ L G IH + +
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHVEDALSLFEN 325
+ + + L++MYAK G + + ++FD M R NVV+WN +I G A +G+ EDAL +F++
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDS 824
Query: 326 MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRG 385
M + + +P+++TF+GVL+AC H G + GR +F M YGIE +++H CMVDLLGR
Sbjct: 825 MRQSHI-MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 386 GKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLS 445
G L EA + I+ KPD + +LL A + G+ ++ E+++ LEP N +V LS
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLS 943
Query: 446 NMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
N+YA G W+ LRK M++ +KKVPG+S +
Sbjct: 944 NIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 176/353 (49%), Gaps = 10/353 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI--RAQRHPQT-ALSLYITMRRHGALPGKHTFPFLL 139
G L A +F + P+ WN +I +R +T A+ + MR+ + T +L
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
A + L + VHA +K GL + +V + LV YS + A VF+ + ++
Sbjct: 335 SAIG-IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W M+ GYA N S++ + LF M + G+ + T S+LS CA S LE+G + H
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ K + + +G+ALV+MYAK GA+ AR++F+ M +R+ VTWN +I + +A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
LF+ M G+ V + L AC H L G+ V C + G++ + ++
Sbjct: 514 FDLFKRMNLCGI-VSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDRDLHTGSSLI 571
Query: 380 DLLGRGGKLLEAKELIKGMP-WKPDVVILGALLEASKNIGNTEVAKVVTEEIL 431
D+ + G + +A+++ +P W VV + AL+ A + N E A V+ +E+L
Sbjct: 572 DMYSKCGIIKDARKVFSSLPEWS--VVSMNALI-AGYSQNNLEEAVVLFQEML 621
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 160/385 (41%), Gaps = 49/385 (12%)
Query: 37 TLAVLADKC---TTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
T +++ C T VE +Q+H M+ + ++ A R+F
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGL--ERNSYCGGALVDMYAKCDRISDARRVFE 219
Query: 94 SIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
I PNT W L P+ A+ ++ MR G P F
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV-------------- 265
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYA 210
V N +R G L DAR +F E+ S + W M+ G+
Sbjct: 266 ------------------TVINTYIRL----GKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI 270
+ C A+ F M + +TL SVLSA L+LG +H G+ +
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
+GS+LV+MY+K + A K+F+ + E+N V WN MI G A +G + LF +M+ G
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 331 VAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLE 390
+ +D TF +LS C L++G F S+ + + +VD+ + G L +
Sbjct: 424 YNI-DDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 391 AKELIKGMPWKPDV---VILGALLE 412
A+++ + M + +V I+G+ ++
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQ 506
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 151/327 (46%), Gaps = 11/327 (3%)
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
L AL + K VH+ L G+ + + N +V Y+ + A FD + + ++ W +
Sbjct: 72 LALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNS 130
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ Y+ + L F + PN T + VLS CAR +E G +IH M G
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+E G ALV+MYAK I+ AR++F+ + + N V W + G G E+A+ +FE
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M EG P+ + F+ V++ G L R +F M + P + + M+ G+
Sbjct: 251 RMRDEG-HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGK 304
Query: 385 GGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE-PDNHGV 440
G A E M K LG++L A + N ++ VV E + L N V
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYV 364
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEE 467
SL +MY++ + + ++ + ++E+
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEK 391
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 216/399 (54%), Gaps = 8/399 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLL 139
G L+ + + N WN+LI H AL L+ M P T +
Sbjct: 353 GKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC + +P+ KQ+H HV++ + D V N L+ YS SG + A VF++I RS+
Sbjct: 413 SACEN-AGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +M+CG++QN S EA++LF+ M E N T +V+ AC+ G LE G+ +H
Sbjct: 471 VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK 530
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ + G++ + +AL++MYAK G + A +F M R++V+W+ MI HG + A
Sbjct: 531 LIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSA 589
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+S F M + G PN+V F+ VLSAC H G ++ G+ F MK+ +G+ P EH+ C +
Sbjct: 590 ISTFNQMVESGTK-PNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFI 647
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLL R G L EA IK MP+ D + G+L+ + ++ K + ++ + D+ G
Sbjct: 648 DLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTG 707
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ LSN+YAE GEW++ RLR MK LKKVPG+S +
Sbjct: 708 YYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 202/449 (44%), Gaps = 39/449 (8%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNT 100
L C+++ + Q+HA ++VT R G + +F + P++
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLR-RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDS 65
Query: 101 FMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHA 157
FM+ LI+ A+ LY + K FP +L+AC+ L V +VH
Sbjct: 66 FMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 158 HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNE 217
++K G+ D+ + L+ Y +G+L DA VFD +P R L W+T+V +N +
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVK 185
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
AL +F+ MV +G EP+ T+ SV+ CA GCL + +H + K ++ L ++L+
Sbjct: 186 ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245
Query: 278 MYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV 337
MY+K G + + ++F+ + ++N V+W MI E AL F M K G+ PN V
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE-PNLV 304
Query: 338 TFIGVLSACCHGGLLDVGRDV-----------------------------FCSMKTVYGI 368
T VLS+C GL+ G+ V +TV +
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 369 --EPKIEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVA 423
+ I + ++ L G +++A L + M KPD L + + A +N G +
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 424 KVVTEEILALEPDNHGVHVSLSNMYAEAG 452
K + ++ + + V SL +MY+++G
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSG 453
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 14/372 (3%)
Query: 34 DPPTLAVLADKCTTVEQLK---QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASR 90
D T+ + + C + L+ VH Q +T + D GDL + R
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQ--ITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 91 IFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTP 147
IF I + N W +I + + AL + M + G P T +L +C L
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG-LIG 317
Query: 148 ALPVHKQVHAHVLKFGLGLD-SHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
+ K VH ++ L + ++ LV Y+ G L D V + R++ W +++
Sbjct: 318 LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLI 377
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
YA +AL LF MV + +P+ TLAS +SAC +G + LG++IH + V
Sbjct: 378 SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
+ S L++MY+K+G++ A +F+ + R+VVTWN M+CG + +G+ +A+SLF+ M
Sbjct: 438 DEFVQNS-LIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
+ + N+VTF+ V+ AC G L+ G+ V + + G++ ++D+ + G
Sbjct: 497 YHSYLEM-NEVTFLAVIQACSSIGSLEKGKWVHHKL-IISGLKDLFTDTA-LIDMYAKCG 553
Query: 387 KLLEAKELIKGM 398
L A+ + + M
Sbjct: 554 DLNAAETVFRAM 565
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 47/364 (12%)
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFG-LGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
L ++CSSL Q+HAH+L G L D L+ Y+ G +R VF+ P
Sbjct: 7 LFRSCSSLRLV----SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY 62
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARS-GCLELGER 255
++ ++ + A+ L+ +V+E + + SVL ACA S L +G +
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
+H + GV+ ++ ++L+ MY + G ++ A K+FDGMP R++V W+ ++ +G
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV--------------FC- 360
V AL +F+ M +GV P+ VT I V+ C G L + R V C
Sbjct: 183 VVKALRMFKCMVDDGVE-PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 361 SMKTVYG----------IEPKIEH-----YGCMVDLLGRG----GKLLEAKELIKGMPWK 401
S+ T+Y I KI + M+ RG L E+IK +
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS-GIE 300
Query: 402 PDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVHVSLSNMYAEAGEWQD--- 456
P++V L ++L + IG K V + L+P+ + ++L +YAE G+ D
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 457 VLRL 460
VLR+
Sbjct: 361 VLRV 364
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 215/400 (53%), Gaps = 9/400 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
G + +A ++F I + +T WN++I + + A+ L+ M G P + T +L
Sbjct: 181 GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML 240
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
ACS L L + + + +GL + + + L+ Y GDL AR VF+++ +
Sbjct: 241 GACSHLGD-LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDR 299
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT M+ Y+QN S+EA LF M G P+ TL++VLSAC G LELG++I
Sbjct: 300 VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH 359
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
++ + + + LV+MY K G + A ++F+ MP +N TWN MI A GH ++A
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEA 419
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L LF+ M P+D+TFIGVLSAC H GL+ G F M +++G+ PKIEHY ++
Sbjct: 420 LLLFDRMS----VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNII 475
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL-EPDNH 438
DLL R G L EA E ++ P KPD ++L A+L A + + + ++ + E N
Sbjct: 476 DLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNA 535
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G +V SN+ A+ W + ++R M++ + K PG S +
Sbjct: 536 GNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWI 575
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 201/387 (51%), Gaps = 14/387 (3%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNT 100
L KC +V QL+Q+ AQM++ H GD ++S +FS +PN
Sbjct: 43 LLKKCISVNQLRQIQAQMLL------HSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNH 96
Query: 101 FMWNTLIRAQRHP----QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVH 156
+ +N +IR + + ALSLY M+ G P K T+ F+ AC+ L + V + VH
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEE-IGVGRSVH 155
Query: 157 AHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSN 216
+ + K GL D H+ + L+ Y+ G + AR +FDEI R W +M+ GY++ +
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
+A+ LF M EGFEP+ TL S+L AC+ G L G + E K + + LGS L+
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 277 NMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPND 336
+MY K G + AR++F+ M +++ V W MI + +G +A LF MEK GV+ P+
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS-PDA 334
Query: 337 VTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
T VLSAC G L++G+ + + ++ I +VD+ G+ G++ EA + +
Sbjct: 335 GTLSTVLSACGSVGALELGKQIETHASEL-SLQHNIYVATGLVDMYGKCGRVEEALRVFE 393
Query: 397 GMPWKPDVVILGALLEASKNIGNTEVA 423
MP K + A++ A + G+ + A
Sbjct: 394 AMPVKNEAT-WNAMITAYAHQGHAKEA 419
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 229/438 (52%), Gaps = 11/438 (2%)
Query: 50 QLKQVHAQMVVTARF-NDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIR 108
L+Q+HA ++ T+ N D+ ++ R+FS P NT+IR
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 109 AQRHPQT---ALSLYITMRRHGALPGKH-TFPFLLKACSSLTPALPVHKQVHAHVLKFGL 164
A QT L+ ++RR+ +LP + F LK C + L Q+H + G
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIK-SGDLLGGLQIHGKIFSDGF 144
Query: 165 GLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEG 224
DS + L+ YS + DA VFDEIP R W + Y +N + + L LF+
Sbjct: 145 LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDK 204
Query: 225 M---VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK 281
M V +P+G T L ACA G L+ G+++H+F+ G+ + L + LV+MY++
Sbjct: 205 MKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSR 264
Query: 282 NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIG 341
G++ A ++F GM ERNVV+W +I GLA +G ++A+ F M K G++ P + T G
Sbjct: 265 CGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS-PEEQTLTG 323
Query: 342 VLSACCHGGLLDVGRDVFCSMKT-VYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW 400
+LSAC H GL+ G F M++ + I+P + HYGC+VDLLGR L +A LIK M
Sbjct: 324 LLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEM 383
Query: 401 KPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRL 460
KPD I LL A + G+ E+ + V ++ L+ + G +V L N Y+ G+W+ V L
Sbjct: 384 KPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTEL 443
Query: 461 RKTMKEERLKKVPGWSLV 478
R MKE+R+ PG S +
Sbjct: 444 RSLMKEKRIHTKPGCSAI 461
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 213/366 (58%), Gaps = 2/366 (0%)
Query: 113 PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVAN 172
P+ AL +Y+ M PG + LKAC L L V + +HA ++K +D V N
Sbjct: 217 PRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD-LRVGRGIHAQIVKRKEKVDQVVYN 275
Query: 173 GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP 232
L++ Y SG DAR VFD + R++ W +++ ++ +E LF M E
Sbjct: 276 VLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF 335
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
+ ATL ++L AC+R L G+ IH + + V L ++L++MY K G + +R++F
Sbjct: 336 SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
D M +++ +WN M+ A +G++E+ ++LFE M + GVA P+ +TF+ +LS C GL
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA-PDGITFVALLSGCSDTGLT 454
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
+ G +F MKT + + P +EHY C+VD+LGR GK+ EA ++I+ MP+KP I G+LL
Sbjct: 455 EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
+ + GN V ++ +E+ LEP N G +V +SN+YA+A W +V ++R+ MK+ +KK
Sbjct: 515 SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKE 574
Query: 473 PGWSLV 478
G S V
Sbjct: 575 AGCSWV 580
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 139/296 (46%), Gaps = 40/296 (13%)
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSL---SLWTTMVCGYAQNFCSNEALALFEGMVAEGF 230
L+ +SV L AR +FD++ SL +W M GY++N +AL ++ M+
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
EP +++ L AC L +G IH + + +V ++ + L+ +Y ++G ARK
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
+FDGM ERNVVTWN +I L+ V + +LF M++E + + T +L AC
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF-SWATLTTILPACSRVA 351
Query: 351 LLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGAL 410
L G+++ ++L++KE KPDV +L +L
Sbjct: 352 ALLTGKEIH--------------------------AQILKSKE-------KPDVPLLNSL 378
Query: 411 LEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
++ G E ++ V + +L + + + + N YA G ++V+ L + M E
Sbjct: 379 MDMYGKCGEVEYSRRVFDVMLTKDLASWNI---MLNCYAINGNIEEVINLFEWMIE 431
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 11/288 (3%)
Query: 37 TLAVLADKCTTVEQLK---QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
+++V C ++ L+ +HAQ+V D G A ++F
Sbjct: 238 SISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMES--GLFDDARKVFD 295
Query: 94 SIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
+ + N WN+LI + +L+ M+ T +L ACS + AL
Sbjct: 296 GMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVA-ALL 354
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYA 210
K++HA +LK D + N L+ Y G++ +R VFD + ++ L+ W M+ YA
Sbjct: 355 TGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK-GVEVGV 269
N E + LFE M+ G P+G T ++LS C+ +G E G + E M+ + V +
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHV 316
+ LV++ + G I A K+ + MP + + W ++ HG+V
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNV 522
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 227/397 (57%), Gaps = 17/397 (4%)
Query: 91 IFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTP 147
+F S+ + + WNT+I A L L M++ G T LL A S+L
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 148 ALPVHKQVHAHVLKFGL---GLDSHVANGLVRCYSVSGDLVDARFVFDE--IPSRSLSLW 202
+ KQ HA +++ G+ G++S+ L+ YS SG + ++ +F+ R + W
Sbjct: 435 K-EIGKQTHAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
+M+ GY QN + + +F M+ + PN T+AS+L AC++ G ++LG+++H F
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
+ ++ V + SALV+MY+K GAI A +F ERN VT+ MI G HG E A+SL
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
F +M++ G+ P+ +TF+ VLSAC + GL+D G +F M+ VY I+P EHY C+ D+L
Sbjct: 610 FLSMQESGIK-PDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 383 GRGGKLLEAKELIKGMPWKPDVVIL-GALLEASKNIGNTEVAKVVTEEILALEPDNH--G 439
GR G++ EA E +KG+ + ++ L G+LL + K G E+A+ V+E + + + G
Sbjct: 669 GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSG 728
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
V LSNMYAE +W+ V ++R+ M+E+ LKK G S
Sbjct: 729 YEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRS 765
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 170/360 (47%), Gaps = 9/360 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLL 139
GD+ + R+F S + N +WNT+I ++ L++ + L
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLA 324
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ S + + +Q H V K L + N L+ YS G + + VF + R +
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDV 384
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W TM+ + QN +E L L M +GF+ + T+ ++LSA + E+G++ H F
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFD--GMPERNVVTWNGMICGLATHGHVE 317
+ +G++ + S L++MY+K+G I +++KLF+ G ER+ TWN MI G +GH E
Sbjct: 445 LIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+F M ++ + PN VT +L AC G +D+G+ + Y ++ +
Sbjct: 504 KTFLVFRKMLEQNIR-PNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASA 561
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKN-IGNTEVAKVVTEEILALEPD 436
+VD+ + G + A+++ + V +L ++ +G ++ ++ + ++PD
Sbjct: 562 LVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPD 621
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 170/359 (47%), Gaps = 31/359 (8%)
Query: 90 RIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
++F ++ + N WNTLI + R+ + I MR P +F ++
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME-VKPSPVSFV-------NV 220
Query: 146 TPALPVHKQVHAHVLKFGLGL--------DSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
PA+ + + + + +GL L D V + + Y+ GD+ +R VFD R
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVER 280
Query: 198 SLSLWTTMVCGYAQNFCSNEALALF-EGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
++ +W TM+ Y QN C E++ LF E + ++ + T SA + +ELG +
Sbjct: 281 NIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQF 340
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H F+ E+ +++ ++L+ MY++ G++ + +F M ER+VV+WN MI +G
Sbjct: 341 HGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLD 400
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
++ L L M+K+G + + +T +LSA + ++G+ + I I+ G
Sbjct: 401 DEGLMLVYEMQKQGFKI-DYITVTALLSAASNLRNKEIGKQTHA-----FLIRQGIQFEG 454
Query: 377 C---MVDLLGRGGKLLEAKELIKGMPW-KPDVVILGALLEASKNIGNTEVAKVVTEEIL 431
++D+ + G + +++L +G + + D +++ G+TE +V ++L
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 175/421 (41%), Gaps = 57/421 (13%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPG--KHTFPF 137
G+ A ++F +I +P T +WNT+I P AL Y M++ +T+
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD------ARFVF 191
LKAC+ T L K VH H+++ V N L+ Y + D R VF
Sbjct: 113 TLKACAE-TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 192 DEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
D + +++ W T++ Y + + EA F M+ +P+ + +V A + S ++
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 252 LGERIHEFMRVKGVEV--GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
+ M G E + + S+ ++MYA+ G I +R++FD ERN+ WN MI
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRD------------ 357
+ + +++ LF V ++VT++ SA +++GR
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFREL 351
Query: 358 -----------------------VFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL 394
VF SM+ E + + M+ + G E L
Sbjct: 352 PIVIVNSLMVMYSRCGSVHKSFGVFLSMR-----ERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 395 IKGMP---WKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEA 451
+ M +K D + + ALL A+ N+ N E+ K ++ G++ L +MY+++
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKS 466
Query: 452 G 452
G
Sbjct: 467 G 467
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 201/350 (57%), Gaps = 5/350 (1%)
Query: 132 KHTFPF--LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF 189
+ FPF +L ++L+ +L + +Q+H L HV N LV Y+ +A
Sbjct: 349 RRNFPFATMLSIAANLS-SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 190 VFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGC 249
+F +P R+ WT ++ GY Q L LF M + +T A+VL A A
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
L LG+++H F+ G V GS LV+MYAK G+I A ++F+ MP+RN V+WN +I
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
A +G E A+ F M + G+ P+ V+ +GVL+AC H G ++ G + F +M +YGI
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQ-PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE 429
PK +HY CM+DLLGR G+ EA++L+ MP++PD ++ ++L A + N +A+ E+
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 430 ILALEP-DNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ ++E + +VS+SN+YA AGEW+ V ++K M+E +KKVP +S V
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 150/332 (45%), Gaps = 16/332 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGA--LPGKHTFPF 137
GD++ A +F ++ W L+ H A L+ M R + LP TF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSH----VANGLVRCYSVSGDLVDARFVFDE 193
LL C+ P V QVHA +K LG D++ V+N L++ Y L A +F+E
Sbjct: 153 LLPGCNDAVPQNAV-GQVHAFAVK--LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
IP + + T++ GY ++ E++ LF M G +P+ T + VL A LG
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
+++H G +G+ +++ Y+K+ + R LFD MPE + V++N +I +
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
E +L F M+ G N F +LS + L +GR + C + + I
Sbjct: 330 DQYEASLHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQLHC--QALLATADSIL 386
Query: 374 HYG-CMVDLLGRGGKLLEAKELIKGMPWKPDV 404
H G +VD+ + EA+ + K +P + V
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 10/234 (4%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG-- 229
N ++ + +GD+ AR +FD +P R++ WT ++ YA+N +EA LF M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVIL--GSALVNMYAKNGAIAM 287
P+ T ++L C + ++H F G + L + L+ Y + + +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 288 ARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
A LF+ +PE++ VT+N +I G G +++ LF M + G P+D TF GVL A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVV 261
Query: 348 HGGLLD--VGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP 399
GL D +G+ + ++ G ++D + ++LE + L MP
Sbjct: 262 --GLHDFALGQQLH-ALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 225 MVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGA 284
++ GF+ + ++ R G + ++++ M K + + +++ + K G
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNT----VSTNTMISGHVKTGD 94
Query: 285 IAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM-EKEGVAVPNDVTFIGVL 343
++ AR LFD MP+R VVTW ++ A + H ++A LF M +P+ VTF +L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 344 SAC 346
C
Sbjct: 155 PGC 157
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 228/454 (50%), Gaps = 11/454 (2%)
Query: 33 QDPPTLAVLADKCTTVEQL---KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHAS 89
D TL+ + C +E L KQ+H+ + + +D G +
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD-VECSLVDMYAKCSADGSVDDCR 325
Query: 90 RIFSSIHQPNTFMWNTLIRAQRH----PQTALSLYITMRRHGAL-PGKHTFPFLLKACSS 144
++F + + W LI A++L+ M G + P TF KAC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
L+ V KQV K GL +S VAN ++ + S + DA+ F+ + ++L + T
Sbjct: 386 LSDP-RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
+ G +N +A L + + T AS+LS A G + GE+IH + G
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+ + +AL++MY+K G+I A ++F+ M RNV++W MI G A HG L F
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M +EGV PN+VT++ +LSAC H GL+ G F SM + I+PK+EHY CMVDLL R
Sbjct: 565 QMIEEGVK-PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSL 444
G L +A E I MP++ DV++ L A + NTE+ K+ +IL L+P+ ++ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 445 SNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
SN+YA AG+W++ +R+ MKE L K G S +
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 158/323 (48%), Gaps = 18/323 (5%)
Query: 116 ALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFG-LGLDSHVANGL 174
A+ +++ G +P + + +++ACS+ + + V + ++K G D V L
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 175 VRCYSVSGD--LVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP 232
+ + V G+ +A VFD++ ++ WT M+ Q EA+ F MV GFE
Sbjct: 209 IDMF-VKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK---NGAIAMAR 289
+ TL+SV SACA L LG+++H + G+ V +LV+MYAK +G++ R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCR 325
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHV-EDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
K+FD M + +V++W +I G + ++ +A++LF M +G PN TF AC
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC-- 383
Query: 349 GGLLD--VGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVI 406
G L D VG+ V G+ ++ + + ++ +A+ + + K ++V
Sbjct: 384 GNLSDPRVGKQVL-GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVS 441
Query: 407 LGALLEAS-KNIGNTEVAKVVTE 428
L+ + +N+ + K+++E
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSE 464
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 164/397 (41%), Gaps = 45/397 (11%)
Query: 116 ALSLYITMRRHGALPGKH-TFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGL 174
A+S M R G P TF LLK+C + K VHA +++F + DS + N L
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIR-ARDFRLGKLVHARLIEFDIEPDSVLYNSL 103
Query: 175 VRCYSVSGDLVDARFVFDEIP---SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
+ YS SGD A VF+ + R + W+ M+ Y N +A+ +F + G
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 232 PNGATLASVLSACARSGCLELGERIHEF-MRVKGVEVGVILGSALVNMYAK-NGAIAMAR 289
PN +V+ AC+ S + +G F M+ E V +G +L++M+ K + A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
K+FD M E NVVTW MI G +A+ F +M G + T V SAC
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE-SDKFTLSSVFSACAEL 282
Query: 350 GLLDVGR-------------DVFCSMKTVYG-------------IEPKIEHYGCM----- 378
L +G+ DV CS+ +Y + ++E + M
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 379 -VDLLGRGGKLLEA----KELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL 433
+ EA E+I +P+ + +A N+ + V K V +
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 434 E-PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
N V S+ +M+ ++ +D R +++ E+ L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 214/397 (53%), Gaps = 4/397 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLL 139
GDL +A ++F + WN +I + LSL+ M G P ++T +
Sbjct: 39 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVF 98
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ L ++ + +Q+H + +K+GL LD V + L Y +G L D V +P R+L
Sbjct: 99 SGSAGLR-SVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL 157
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W T++ G AQN C L L++ M G PN T +VLS+C+ G++IH
Sbjct: 158 VAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE 217
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
G V + S+L++MY+K G + A K F + + V W+ MI HG ++A
Sbjct: 218 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ LF M ++ N+V F+ +L AC H GL D G ++F M YG +P ++HY C+V
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 337
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLLGR G L +A+ +I+ MP K D+VI LL A N E+A+ V +EIL ++P++
Sbjct: 338 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 397
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
+V L+N++A A W+DV +RK+M+++ +KK G S
Sbjct: 398 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 434
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 1/188 (0%)
Query: 171 ANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGF 230
+N L+ Y +GDLV+AR VFDE+P R L+ W M+ G Q + E L+LF M GF
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
P+ TL SV S A + +G++IH + G+E+ +++ S+L +MY +NG +
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
+ MP RN+V WN +I G A +G E L L++ M+ G PN +TF+ VLS+C
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR-PNKITFVTVLSSCSDLA 206
Query: 351 LLDVGRDV 358
+ G+ +
Sbjct: 207 IRGQGQQI 214
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 214/399 (53%), Gaps = 11/399 (2%)
Query: 85 LTHASRIFSSIH-QPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
+ A R+F I N W +I + A+ L+ M+R G P + T+ +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
A ++P+ +VHA V+K S V L+ Y G + +A VF I + +
Sbjct: 406 ALPVISPS-----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGC-LELGERIHEF 259
W+ M+ GYAQ + A+ +F + G +PN T +S+L+ CA + + G++ H F
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
++ + + SAL+ MYAK G I A ++F E+++V+WN MI G A HG A
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L +F+ M+K V + + VTFIGV +AC H GL++ G F M I P EH CMV
Sbjct: 581 LDVFKEMKKRKVKM-DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DL R G+L +A ++I+ MP I +L A + TE+ ++ E+I+A++P++
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V LSNMYAE+G+WQ+ ++RK M E +KK PG+S +
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 153/316 (48%), Gaps = 4/316 (1%)
Query: 114 QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANG 173
Q A L++ + R G F +LK ++L L +Q+H +KFG D V
Sbjct: 75 QEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDEL-FGRQLHCQCIKFGFLDDVSVGTS 133
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPN 233
LV Y + D R VFDE+ R++ WTT++ GYA+N ++E L LF M EG +PN
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 234 GATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFD 293
T A+ L A G G ++H + G++ + + ++L+N+Y K G + AR LFD
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 294 GMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLD 353
++VVTWN MI G A +G +AL +F +M V + ++ +F V+ C + L
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL-SESSFASVIKLCANLKELR 312
Query: 354 VGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEA 413
+ CS+ YG ++ + +L+A L K + +VV A++
Sbjct: 313 FTEQLHCSV-VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 414 S-KNIGNTEVAKVVTE 428
+N G E + +E
Sbjct: 372 FLQNDGKEEAVDLFSE 387
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 9/271 (3%)
Query: 53 QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLI--RAQ 110
+VHAQ+V T + G + A+++FS I + W+ ++ AQ
Sbjct: 414 EVHAQVVKTNY--ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 111 R-HPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSH 169
+ A+ ++ + + G P + TF +L C++ ++ KQ H +K L
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 170 VANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG 229
V++ L+ Y+ G++ A VF + L W +M+ GYAQ+ + +AL +F+ M
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVIL--GSALVNMYAKNGAIAM 287
+ +G T V +AC +G +E GE+ + M V+ ++ S +V++Y++ G +
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIM-VRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 288 ARKLFDGMPE-RNVVTWNGMICGLATHGHVE 317
A K+ + MP W ++ H E
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 10/232 (4%)
Query: 171 ANGL--VRCYSV----SGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEG 224
ANG+ VR Y S L +A +FD+ P R + +++ G++++ + EA LF
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83
Query: 225 MVAEGFEPNGATLASVLSACARSGCLEL-GERIHEFMRVKGVEVGVILGSALVNMYAKNG 283
+ G E + + +SVL A + C EL G ++H G V +G++LV+ Y K
Sbjct: 84 IHRLGMEMDCSIFSSVLKVSA-TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS 142
Query: 284 AIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
RK+FD M ERNVVTW +I G A + ++ L+LF M+ EG PN TF L
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ-PNSFTFAAAL 201
Query: 344 SACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
G+ G V ++ G++ I +++L + G + +A+ L
Sbjct: 202 GVLAEEGVGGRGLQVH-TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 226/415 (54%), Gaps = 21/415 (5%)
Query: 83 GDLTHASRIFSSIHQPNTFM----WNTLIR--AQRH-PQTALSLYITMRRHGALPGKHTF 135
G A R+F + + M W+ I AQR AL + M G P + T
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKF-------GLGLDSHVANGLVRCYSVSGDLVDAR 188
+L C+S+ AL K++H + +K+ G G ++ V N L+ Y+ + AR
Sbjct: 369 ISVLSGCASVG-ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 189 FVFDEIP--SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE--PNGATLASVLSAC 244
+FD + R + WT M+ GY+Q+ +N+AL L M E + PN T++ L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 245 ARSGCLELGERIHEF-MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTW 303
A L +G++IH + +R + V + + + L++MYAK G+I+ AR +FD M +N VTW
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 304 NGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMK 363
++ G HG+ E+AL +F+ M + G + + VT + VL AC H G++D G + F MK
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKL-DGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 364 TVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
TV+G+ P EHY C+VDLLGR G+L A LI+ MP +P V+ A L + G E+
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 424 KVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ E+I L ++ G + LSN+YA AG W+DV R+R M+ + +KK PG S V
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 191/440 (43%), Gaps = 61/440 (13%)
Query: 44 KCTTVEQLKQVHAQM----VVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSI--HQ 97
KC T+ Q+K +H ++ ++T H G L+HA +
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISV-------GCLSHAVSLLRRFPPSD 89
Query: 98 PNTFMWNTLIRAQRHPQTA---LSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
+ WN+LIR+ A L L+ M P +TFPF+ KAC ++ ++ +
Sbjct: 90 AGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEIS-SVRCGES 148
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
HA L G + V N LV YS L DAR VFDE+ + W +++ YA+
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK 208
Query: 215 SNEALALFEGMVAE-GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
AL +F M E G P+ TL +VL CA G LG+++H F + + +G+
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
LV+MYAK G + A +F M ++VV+WN M+ G + G EDA+ LFE M++E + +
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 334 ----------------------------------PNDVTFIGVLSACCHGGLLDVGRDVF 359
PN+VT I VLS C G L G+++
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 360 CSMKTVYGIEPKIEHYG-------CMVDLLGRGGKLLEAKELIKGM-PWKPDVVILGALL 411
C Y I+ + +G ++D+ + K+ A+ + + P + DVV ++
Sbjct: 389 C-YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 412 EASKNIGNTEVAKVVTEEIL 431
G+ A + E+
Sbjct: 448 GGYSQHGDANKALELLSEMF 467
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 165/371 (44%), Gaps = 51/371 (13%)
Query: 109 AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDS 168
A+ H +SL+ T + P + T PF+ K C +++ K +H +L FG+ L
Sbjct: 12 AKSHQYIKVSLFST-----SAP-EITPPFIHK-CKTISQV----KLIHQKLLSFGI-LTL 59
Query: 169 HVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL--WTTMVCGYAQNFCSNEALALFEGMV 226
++ + L+ Y G L A + P + W +++ Y N C+N+ L LF M
Sbjct: 60 NLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH 119
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
+ + P+ T V AC + GE H V G V +G+ALV MY++ +++
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
ARK+FD M +VV+WN +I A G + AL +F M E P+++T + VL C
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVI 406
G +G+ + C T I+ C+VD+ + G + EA + M K DVV
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-DVVS 297
Query: 407 LGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
A++ Y++ G ++D +RL + M+E
Sbjct: 298 WNAMVAG----------------------------------YSQIGRFEDAVRLFEKMQE 323
Query: 467 ERLK-KVPGWS 476
E++K V WS
Sbjct: 324 EKIKMDVVTWS 334
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 217/398 (54%), Gaps = 7/398 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
G L +F + + N W T+I + + A+S+++ MR G P + TF L+ A
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMISSNK--DDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
+ ++H +K G + V N + Y+ L DA+ F++I R + W
Sbjct: 383 K-CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL--GERIHEFM 260
M+ G+AQN S+EAL +F AE PN T SVL+A A + + + G+R H +
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
G+ ++ SAL++MYAK G I + K+F+ M ++N W +I ++HG E +
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+LF M KE VA P+ VTF+ VL+AC G++D G ++F M VY +EP EHY CMVD
Sbjct: 561 NLFHKMIKENVA-PDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
+LGR G+L EA+EL+ +P P +L ++L + + GN ++ V E + ++P+ G
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGS 679
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V + N+YAE EW +RK M+++ + K G+S +
Sbjct: 680 YVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 161/322 (50%), Gaps = 13/322 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
G +A IF ++ P+ WNT++ Q AL+ + M+ G + T+ L C
Sbjct: 125 GRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFC 184
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
+ + Q+ + V+K GL D V N + YS SG AR VFDE+ + + W
Sbjct: 185 VG-SEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 203 TTMVCGYAQNFCSN-EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+++ G +Q EA+ +F M+ EG E + + SV++ C L+L +IH
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 303
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
+G E + +G+ L++ Y+K G + + +F M ERNVV+W MI + +DA+S
Sbjct: 304 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVS 358
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV--FCSMKTVYGIEPKIEHYGCMV 379
+F NM +GV PN+VTF+G+++A + G + C +KT + EP + + +
Sbjct: 359 IFLNMRFDGV-YPNEVTFVGLINAVKCNEQIKEGLKIHGLC-IKTGFVSEPSVGN--SFI 414
Query: 380 DLLGRGGKLLEAKELIKGMPWK 401
L + L +AK+ + + ++
Sbjct: 415 TLYAKFEALEDAKKAFEDITFR 436
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 125/254 (49%), Gaps = 13/254 (5%)
Query: 110 QRHPQTALSLYITMRRHGALPGKH----TFPFLLKACSSLTPALPVHKQVHAHVLKFGLG 165
+ P ALS++ + G G+H T LKAC L Q+H G
Sbjct: 53 RNSPARALSIFKENLQLGYF-GRHMDEVTLCLALKACRG---DLKRGCQIHGFSTTSGFT 108
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM 225
V+N ++ Y +G +A +F+ + + W T++ G+ N AL M
Sbjct: 109 SFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRM 165
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
+ G + T ++ LS C S LG ++ + G+E +++G++ + MY+++G+
Sbjct: 166 KSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSF 225
Query: 286 AMARKLFDGMPERNVVTWNGMICGLATHGHVE-DALSLFENMEKEGVAVPNDVTFIGVLS 344
AR++FD M +++++WN ++ GL+ G +A+ +F +M +EGV + + V+F V++
Sbjct: 226 RGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVEL-DHVSFTSVIT 284
Query: 345 ACCHGGLLDVGRDV 358
CCH L + R +
Sbjct: 285 TCCHETDLKLARQI 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 218 ALALFEGMVAEGF---EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSA 274
AL++F+ + G+ + TL L AC G L+ G +IH F G V + +A
Sbjct: 59 ALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNA 116
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVP 334
++ MY K G A +F+ + + +VV+WN ++ G + + AL+ M+ GV V
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGV-VF 172
Query: 335 NDVTFIGVLSAC--CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAK 392
+ T+ LS C G LL + S G+E + + + R G A+
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQ---STVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 393 ELIKGMPWKPDVVILGALL 411
+ M +K D++ +LL
Sbjct: 230 RVFDEMSFK-DMISWNSLL 247
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 203/386 (52%), Gaps = 5/386 (1%)
Query: 96 HQPNTFMWNTLI--RAQRHP-QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH 152
H + WN ++ Q H L L+ M + G T + K C L A+
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF-AINQG 536
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
KQVHA+ +K G LD V++G++ Y GD+ A+F FD IP WTTM+ G +N
Sbjct: 537 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIEN 596
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
A +F M G P+ T+A++ A + LE G +IH +G
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
++LV+MYAK G+I A LF + N+ WN M+ GLA HG ++ L LF+ M+ G+
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAK 392
P+ VTFIGVLSAC H GL+ SM YGI+P+IEHY C+ D LGR G + +A+
Sbjct: 717 -PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAE 775
Query: 393 ELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAG 452
LI+ M + + LL A + G+TE K V ++L LEP + +V LSNMYA A
Sbjct: 776 NLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 835
Query: 453 EWQDVLRLRKTMKEERLKKVPGWSLV 478
+W ++ R MK ++KK PG+S +
Sbjct: 836 KWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 8/313 (2%)
Query: 88 ASRIFSSIHQPNTFMWNTLIR--AQRHPQT-ALSLYITMRRHGALPGKHTFPFLLKACSS 144
A +F ++ + + WN++I AQ + A+ L++ + R G P ++T +LKA SS
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
L L + KQVH H +K DS V+ L+ YS + + +A +F E + L W
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNA 487
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ GY Q+ ++ L LF M +G + TLA+V C + G+++H + G
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
++ + + S +++MY K G ++ A+ FD +P + V W MI G +G E A +F
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMVDLLG 383
M GV +P++ T + A L+ GR + ++K +P + +VD+
Sbjct: 608 QMRLMGV-LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYA 664
Query: 384 RGGKLLEAKELIK 396
+ G + +A L K
Sbjct: 665 KCGSIDDAYCLFK 677
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 32 RQDPPTLAVLADKC---TTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHA 88
R D TLA + C + Q KQVHA + + D GD++ A
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY--DLDLWVSSGILDMYVKCGDMSAA 571
Query: 89 SRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
F SI P+ W T+I + A ++ MR G LP + T L KA S L
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
T AL +Q+HA+ LK D V LV Y+ G + DA +F I +++ W M
Sbjct: 632 T-ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV--- 262
+ G AQ+ E L LF+ M + G +P+ T VLSAC+ SG L ++ MR
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG---LVSEAYKHMRSMHG 747
Query: 263 -KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVE 317
G++ + S L + + G + A L + M E + + ++ G E
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 8/210 (3%)
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
F FL A +S L + K HA +L F + + N L+ YS G L AR VFD++
Sbjct: 43 FGFLRNAITS--SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 195 PSRSLSLWTTMVCGYAQNF-CS----NEALALFEGMVAEGFEPNGATLASVLSACARSGC 249
P R L W +++ YAQ+ C +A LF + + + TL+ +L C SG
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
+ E H + G++ + ALVN+Y K G + + LF+ MP R+VV WN M+
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTF 339
G E+A+ L G+ PN++T
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLN-PNEITL 249
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 47/381 (12%)
Query: 134 TFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
TF +L A + +L + +QVH LK GL L V+N L+ Y AR VFD
Sbjct: 317 TFILML-ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDN 375
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACAR-SGCLEL 252
+ R L W +++ G AQN EA+ LF ++ G +P+ T+ SVL A + L L
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 253 GERIH-EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
+++H +++ V + +AL++ Y++N + A LF+ ++V WN M+ G
Sbjct: 436 SKQVHVHAIKINNVSDSFV-STALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYT 493
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEP 370
L LF M K+G +D T V C ++ G+ V ++K+ Y ++
Sbjct: 494 QSHDGHKTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGMP------WK----------------------- 401
+ ++D+ + G + A+ +P W
Sbjct: 553 WVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 402 -----PDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG-VHVSLSNMYAEAGEWQ 455
PD + L +AS + E + + L L N V SL +MYA+ G
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 456 DVLRLRKTMKEERLKKVPGWS 476
D L K ++ + + W+
Sbjct: 671 DAYCLFKRIE---MMNITAWN 688
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 219 LALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNM 278
L F MV E + T +L+ + L LG+++H G+++ + + ++L+NM
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 279 YAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVT 338
Y K AR +FD M ER++++WN +I G+A +G +A+ LF + + G+ P+ T
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK-PDQYT 418
Query: 339 FIGVLSA 345
VL A
Sbjct: 419 MTSVLKA 425
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 229 GFEPNGATLASV-LSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
GF N T + + L C + L E F L + L++MY+K G++
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERF-----------LINNLISMYSKCGSLTY 92
Query: 288 ARKLFDGMPERNVVTWNGMICGLATHG-----HVEDALSLFENMEKEGVAVPNDVTFIGV 342
AR++FD MP+R++V+WN ++ A +++ A LF + ++ V + +T +
Sbjct: 93 ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRIL-RQDVVYTSRMTLSPM 151
Query: 343 LSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKP 402
L C H G + + F G++ G +V++ + GK+ E K L + MP++
Sbjct: 152 LKLCLHSGYV-WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR- 209
Query: 403 DVVILGALLEASKNIGNTEVA 423
DVV+ +L+A +G E A
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEA 230
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP--------QTALSLYITMRRHGALPGKHT 134
G LT+A R+F + + WN+++ A Q A L+ +R+ + T
Sbjct: 88 GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMT 147
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
+LK C + + + H + K GL D VA LV Y G + + + +F+E+
Sbjct: 148 LSPMLKLCLH-SGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATL 237
P R + LW M+ Y + EA+ L + G PN TL
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 218/398 (54%), Gaps = 6/398 (1%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKA 141
++ A IFS + + ++ +I H +L ++ + + P + T +L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
L AL + +++H ++K G ++ ++ Y+ G + A +F+ + R +
Sbjct: 451 IGILL-ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS 509
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W +M+ AQ+ + A+ +F M G + ++++ LSACA G+ IH FM
Sbjct: 510 WNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
+ V S L++MYAK G + A +F M E+N+V+WN +I HG ++D+L
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 322 LFENM-EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
LF M EK G+ P+ +TF+ ++S+CCH G +D G F SM YGI+P+ EHY C+VD
Sbjct: 630 LFHEMVEKSGIR-PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVD 688
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
L GR G+L EA E +K MP+ PD + G LL A + N E+A+V + +++ L+P N G
Sbjct: 689 LFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGY 748
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V +SN +A A EW+ V ++R MKE ++K+PG+S +
Sbjct: 749 YVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 183/391 (46%), Gaps = 11/391 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G AS++F + + +T WN +I + +L+ + M G LP TF LL
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ S L KQ+H ++++ + LD + + L+ Y + A+ +F + S +
Sbjct: 348 PSVSKFE-NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
++T M+ GY N ++L +F +V PN TL S+L L+LG +H F
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ KG + +G A+++MYAK G + +A ++F+ + +R++V+WN MI A + A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ +F M G+ + V+ LSAC + G+ + M + + + ++
Sbjct: 527 IDIFRQMGVSGICY-DCVSISAALSACANLPSESFGKAIHGFM-IKHSLASDVYSESTLI 584
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL---ALEPD 436
D+ + G L A + K M K ++V +++ A N G + + + E++ + PD
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
+ + + G+ + +R ++M E+
Sbjct: 644 -QITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 152/334 (45%), Gaps = 12/334 (3%)
Query: 35 PPTLAVLADKCTT---VEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRI 91
P L++L C+ + Q KQVHA ++V + D G + ++
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGD--SYTDERILGMYAMCGSFSDCGKM 92
Query: 92 FS--SIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLT 146
F + + + WN++I + AL+ Y M G P TFP L+KAC +L
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 152
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
+ + V G+ + VA+ L++ Y G + +FD + + +W M+
Sbjct: 153 NFKGI-DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
GYA+ + + F M + PN T VLS CA ++LG ++H + V GV+
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
+ ++L++MY+K G A KLF M + VTWN MI G G +E++L+ F M
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC 360
GV +P+ +TF +L + L+ + + C
Sbjct: 332 ISSGV-LPDAITFSSLLPSVSKFENLEYCKQIHC 364
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 186/434 (42%), Gaps = 44/434 (10%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G + S++F + Q + +WN ++ + + + MR P TF +L
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C+S + + Q+H V+ G+ + + N L+ YS G DA +F +
Sbjct: 247 SVCAS-KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADT 305
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W M+ GY Q+ E+L F M++ G P+ T +S+L + ++ LE ++IH +
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ + + + L SAL++ Y K ++MA+ +F +VV + MI G +G D+
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSAC-----------CHGGLLDVGRDVFCS------- 361
L +F + K ++ PN++T + +L HG ++ G D C+
Sbjct: 426 LEMFRWLVKVKIS-PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVID 484
Query: 362 -------MKTVYGI-----EPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVI 406
M Y I + I + M+ + A ++ + M D V
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 407 LGALLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
+ A L A N+ + K + ++ +L D + +L +MYA+ G + + + KTM
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLASDVYS-ESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 465 KEERLKKVPGWSLV 478
KE K + W+ +
Sbjct: 604 KE---KNIVSWNSI 614
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 197/343 (57%), Gaps = 3/343 (0%)
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
LKACS L A+ + K++H + +V N L+ YS DL A VF + S
Sbjct: 287 LKACS-LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
L W +++ GYAQ S EA L M+ GF+PN TLAS+L CAR L+ G+ H
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 259 F-MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ +R K + +L ++LV++YAK+G I A+++ D M +R+ VT+ +I G G
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
AL+LF+ M + G+ P+ VT + VLSAC H L+ G +F M+ YGI P ++H+ C
Sbjct: 466 VALALFKEMTRSGIK-PDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSC 524
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
MVDL GR G L +AK++I MP+KP LL A GNT++ K E++L ++P+N
Sbjct: 525 MVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN 584
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVTT 480
G +V ++NMYA AG W + +R M++ +KK PG + + T
Sbjct: 585 PGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDT 627
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 7/226 (3%)
Query: 133 HTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD 192
H+ LL AC + A QVHAH + G+ S + LV YS +A+ + +
Sbjct: 44 HSAASLLSACVDVR-AFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE 102
Query: 193 EIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL 252
W ++ YA+N E +A ++ MV++G P+ T SVL AC + +
Sbjct: 103 NSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
G +H + V + + + +AL++MY + + +AR+LFD M ER+ V+WN +I A+
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
G +A LF+ M GV V V ++S GG L G V
Sbjct: 223 EGMWSEAFELFDKMWFSGVEV--SVITWNIIS----GGCLQTGNYV 262
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 150/383 (39%), Gaps = 43/383 (11%)
Query: 103 WNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
WN LI + + ++ Y M G P T+P +LKAC T + + VH +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE-TLDVAFGRVVHGSI 170
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEAL 219
+V N L+ Y ++ AR +FD + R W ++ YA +EA
Sbjct: 171 EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAF 230
Query: 220 ALFEGMVAEGFEPNGATLASV-----------------------------------LSAC 244
LF+ M G E + T + L AC
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 245 ARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWN 304
+ G + LG+ IH + + + L+ MY+K + A +F E ++ TWN
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 305 GMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKT 364
+I G A E+A L M G PN +T +L C L G++ C +
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQ-PNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 365 VYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAK 424
+ + +VD+ + GK++ AK++ M K D V +L++ N G VA
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 425 VVTEEIL--ALEPDNHGVHVSLS 445
+ +E+ ++PD+ V LS
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLS 491
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLK 140
DL HA +F + + WN++I + A L M G P T +L
Sbjct: 330 DLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILP 389
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLD-SHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C+ + L K+ H ++L+ D + + N LV Y+ SG +V A+ V D + R
Sbjct: 390 LCARIAN-LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDE 448
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
+T+++ GY ALALF+ M G +P+ T+ +VLSAC+ S + GER+ F
Sbjct: 449 VTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERL--F 506
Query: 260 MRVK---GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGH 315
M+++ G+ + S +V++Y + G +A A+ + MP + + TW ++ HG+
Sbjct: 507 MKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGN 566
Query: 316 VE 317
+
Sbjct: 567 TQ 568
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 217/389 (55%), Gaps = 14/389 (3%)
Query: 88 ASRIFSSIHQPNT--FMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
A +F + + ++ F WN+LI + A++LY M G P + TFP +LKAC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
+ ++ + + +H ++K G G D +V N LV Y+ GD+V AR VFD IP + W
Sbjct: 206 GGIG-SVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSW 264
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
+M+ GY + +EAL +F MV G EP+ ++SVL AR + G ++H ++
Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIR 321
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
+G+E + + +AL+ +Y+K G + A +FD M ER+ V+WN +I + H + L
Sbjct: 322 RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKY 378
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
FE M + A P+ +TF+ VLS C + G+++ G +F M YGI+PK+EHY CMV+L
Sbjct: 379 FEQMHRAN-AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLY 437
Query: 383 GRGGKLLEAKELI-KGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVH 441
GR G + EA +I + M + + GALL A GNT++ +V + + LEPDN
Sbjct: 438 GRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNF 497
Query: 442 VSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
L +Y++A +DV R+R+ M + L+
Sbjct: 498 ELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 116/222 (52%), Gaps = 10/222 (4%)
Query: 128 ALPGKHTFPFLLKACSSLTP---ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDL 184
+L F LL+ C SL + VH + ++L+ LG+ S LVR Y+ G
Sbjct: 88 SLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSK----LVRLYASCGYA 143
Query: 185 VDARFVFDEIPSRSLS--LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLS 242
A VFD + R S W +++ GYA+ +A+AL+ M +G +P+ T VL
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 243 ACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVT 302
AC G +++GE IH + +G V + +ALV MYAK G I AR +FD +P ++ V+
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 303 WNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLS 344
WN M+ G HG + +AL +F M + G+ P+ V VL+
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIE-PDKVAISSVLA 304
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 17/252 (6%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
GD+ A +F I + WN+++ H AL ++ M ++G P K +L
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
S +Q+H V++ G+ + VAN L+ YS G L A F+FD++ R
Sbjct: 304 ARVLSFKHG----RQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDT 359
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W ++ +++N + L FE M +P+G T SVLS CA +G +E GER+
Sbjct: 360 VSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSL 416
Query: 260 M-RVKGVEVGVILGSALVNMYAKNGAIAMARKLF--DGMPERNVVTWNGMICGLATHGHV 316
M + G++ + + +VN+Y + G + A + + E W ++ HG+
Sbjct: 417 MSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNT 476
Query: 317 E----DALSLFE 324
+ A LFE
Sbjct: 477 DIGEVAAQRLFE 488
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 211/387 (54%), Gaps = 9/387 (2%)
Query: 96 HQP--NTFMWNTLI---RAQRHPQTALSLYITMRRHGAL-PGKHTFPFLLKACSSLTPAL 149
H P N F WN +I ++ L++ M R + P T P +L+ACS+ A
Sbjct: 92 HMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREA- 150
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGY 209
+H LK G V++ LV Y G L+ AR +FD++P R L+T M GY
Sbjct: 151 KSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGY 210
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
Q + LA+F M GF + + S+L AC + G L+ G+ +H + + +G+
Sbjct: 211 VQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGL 270
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE 329
LG+A+ +MY K + A +F M R+V++W+ +I G G V + LF+ M KE
Sbjct: 271 NLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE 330
Query: 330 GVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLL 389
G+ PN VTF+GVLSAC HGGL++ F M+ Y I P+++HY + D + R G L
Sbjct: 331 GIE-PNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLE 388
Query: 390 EAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYA 449
EA++ ++ MP KPD ++GA+L K GN EV + V E++ L+P +V+L+ +Y+
Sbjct: 389 EAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYS 448
Query: 450 EAGEWQDVLRLRKTMKEERLKKVPGWS 476
AG + + LR+ MKE+++ KVPG S
Sbjct: 449 AAGRFDEAESLRQWMKEKQISKVPGCS 475
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 210/388 (54%), Gaps = 32/388 (8%)
Query: 114 QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLK---FGLGLDSHV 170
Q AL + M G + T+P +++AC++ L + KQVHA+VL+ F D+ +
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACAT-AGLLQLGKQVHAYVLRREDFSFHFDNSL 326
Query: 171 A---------------------------NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
N L+ Y SG + +A+ +F E+ +++ W
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
M+ G A+N E L LF M EGFEP + + +CA G G++ H +
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G + + G+AL+ MYAK G + AR++F MP + V+WN +I L HGH +A+ ++
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
E M K+G+ P+ +T + VL+AC H GL+D GR F SM+TVY I P +HY ++DLL
Sbjct: 507 EEMLKKGIR-PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLC 565
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVS 443
R GK +A+ +I+ +P+KP I ALL + GN E+ + +++ L P++ G ++
Sbjct: 566 RSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYML 625
Query: 444 LSNMYAEAGEWQDVLRLRKTMKEERLKK 471
LSNM+A G+W++V R+RK M++ +KK
Sbjct: 626 LSNMHAATGQWEEVARVRKLMRDRGVKK 653
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 186/428 (43%), Gaps = 78/428 (18%)
Query: 83 GDLTHASRIF--SSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPF 137
GD+T A +F + + +T M+N +I H +A++L+ M+ G P TF
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLV----RCYSVSGDLVDARFVFDE 193
+L + + Q HA LK G G + V+N LV +C S L AR VFDE
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 194 IPSRSLSLWTTMVCGYAQNFCSN--------------------------------EALAL 221
I + WTTM+ GY +N + EAL +
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 222 FEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK 281
MV+ G E + T SV+ ACA +G L+LG+++H ++ ++ + ++LV++Y K
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV-LRREDFSFHFDNSLVSLYYK 332
Query: 282 NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV------------------------- 316
G AR +F+ MP +++V+WN ++ G + GH+
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
Query: 317 ------EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
E+ L LF M++EG P D F G + +C G G+ + + G +
Sbjct: 393 AENGFGEEGLKLFSCMKREGFE-PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDS 450
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ ++ + + G + EA+++ + MP D V AL+ A G+ A V EE+
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEM 509
Query: 431 L--ALEPD 436
L + PD
Sbjct: 510 LKKGIRPD 517
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A IF + + N W +I + L L+ M+R G P + F +
Sbjct: 365 GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
K+C+ L A +Q HA +LK G N L+ Y+ G + +AR VF +P
Sbjct: 425 KSCAVLG-AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W ++ Q+ EA+ ++E M+ +G P+ TL +VL+AC+ +G ++ G + +
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 260 MR-VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVV-TWNGMICGLATHGHVE 317
M V + G + L+++ ++G + A + + +P + W ++ G HG++E
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 170/405 (41%), Gaps = 88/405 (21%)
Query: 139 LKACSSLT-PALPVHKQVHAHVLKFGLGLDSHVANGL--VRC------------------ 177
L+ C L +L + + VH +++ FG +H+ N L V C
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 178 -----------YSVSGDLVDARFVFDEIP--SRSLSLWTTMVCGYAQNFCSNEALALFEG 224
Y SGD+ AR VF++ P R ++ M+ G++ N A+ LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 225 MVAEGFEPNGATLASVLSACA-----RSGCLELGERIHEFMRVKGVEVGVILGSALVNMY 279
M EGF+P+ T ASVL+ A C++ H G + +ALV++Y
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAGYITSVSNALVSVY 194
Query: 280 AKNGA----IAMARKLFDGMPERNVVTW-------------------------------- 303
+K + + ARK+FD + E++ +W
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 304 NGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMK 363
N MI G G ++AL + M G+ + ++ T+ V+ AC GLL +G+ V
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIEL-DEFTYPSVIRACATAGLLQLGKQVHA--- 310
Query: 364 TVYGIEPKIEHY-GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEV 422
V E H+ +V L + GK EA+ + + MP K D+V ALL + G+
Sbjct: 311 YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGE 369
Query: 423 AKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
AK++ +E+ E + + +S + AE G ++ L+L MK E
Sbjct: 370 AKLIFKEM--KEKNILSWMIMISGL-AENGFGEEGLKLFSCMKRE 411
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 190/345 (55%), Gaps = 2/345 (0%)
Query: 134 TFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
T+ LL+ C K++HA + G L+ ++ L+ Y++SGDL A +F
Sbjct: 110 TYAVLLQECKQ-RKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRS 168
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+ R L W M+ GY Q E L ++ M P+ T ASV AC+ LE G
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
+R H M + ++ +I+ SALV+MY K + + ++FD + RNV+TW +I G H
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
G V + L FE M++EG PN VTF+ VL+AC HGGL+D G + F SMK YGIEP+ +
Sbjct: 289 GKVSEVLKCFEKMKEEGCR-PNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQ 347
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL 433
HY MVD LGR G+L EA E + P K + G+LL A + GN ++ ++ + L L
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLEL 407
Query: 434 EPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+P N G +V +N YA G + ++R+ M+ +KK PG+S +
Sbjct: 408 DPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 13/293 (4%)
Query: 34 DPPTLAVLADKCTTVEQL---KQVHAQM-VVTARFNDHXXXXXXXXXXXXXXXGDLTHAS 89
+P T AVL +C ++ K++HAQM VV N++ GDL A
Sbjct: 107 EPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS---GDLQTAG 163
Query: 90 RIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLT 146
+F S+ + WN +I Q L +Y MR++ +P ++TF + +ACS+L
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL- 222
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
L K+ HA ++K + + V + LV Y D VFD++ +R++ WT+++
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG-ERIHEFMRVKGV 265
GY + +E L FE M EG PN T VL+AC G ++ G E + R G+
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 266 EVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVE 317
E +A+V+ + G + A + P + + W ++ HG+V+
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK 395
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
+ G + T A +L C + G+RIH M V G + L L+ +YA +G +
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
A LF + R+++ WN MI G G ++ L ++ +M + + VP+ TF V AC
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI-VPDQYTFASVFRAC 219
Query: 347 CHGGLLDVGR 356
L+ G+
Sbjct: 220 SALDRLEHGK 229
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 202/366 (55%), Gaps = 3/366 (0%)
Query: 113 PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVAN 172
P +L M P H P K+C+ L+ + + VH +K G D V +
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRC-DIGRSVHCLSMKTGYDADVFVGS 155
Query: 173 GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP 232
LV Y+ G++V AR +FDE+P R++ W+ M+ GYAQ + EAL LF+ + E
Sbjct: 156 SLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
N + +SV+S CA S LELG +IH + +GS+LV++Y+K G A ++F
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
+ +P +N+ WN M+ A H H + + LF+ M+ G+ PN +TF+ VL+AC H GL+
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK-PNFITFLNVLNACSHAGLV 334
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
D GR F MK IEP +HY +VD+LGR G+L EA E+I MP P + GALL
Sbjct: 335 DEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
+ NTE+A +++ L P + G+H+SLSN YA G ++D + RK +++ KK
Sbjct: 394 SCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKE 453
Query: 473 PGWSLV 478
G S V
Sbjct: 454 TGLSWV 459
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 1/205 (0%)
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
Q+H +V+K GL L VAN L+ YS S D+R F++ P +S + W++++ +AQN
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNE 95
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
+L + M+A P+ L S +CA ++G +H G + V +GS
Sbjct: 96 LPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGS 155
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
+LV+MYAK G I ARK+FD MP+RNVVTW+GM+ G A G E+AL LF+ E +AV
Sbjct: 156 SLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDV 358
ND +F V+S C + LL++GR +
Sbjct: 216 -NDYSFSSVISVCANSTLLELGRQI 239
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
N + +L + AR+ G ++H ++ G+ + ++ + L+N Y+K+ +R+ F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
+ P+++ TW+ +I A + +L + M G P+D +C
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKM-MAGNLRPDDHVLPSATKSCAILSRC 132
Query: 353 DVGRDVFC-SMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
D+GR V C SMKT Y + + +VD+ + G+++ A+++ MP + +VV ++
Sbjct: 133 DIGRSVHCLSMKTGYDADVFVG--SSLVDMYAKCGEIVYARKMFDEMPQR-NVVTWSGMM 189
Query: 412 EASKNIGNTEVAKVVTEEIL 431
+G E A + +E L
Sbjct: 190 YGYAQMGENEEALWLFKEAL 209
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 176/296 (59%), Gaps = 2/296 (0%)
Query: 183 DLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLS 242
+L +A F D +++L W M+ GY +N + L LF M+ EG PN + L+S L
Sbjct: 234 ELAEAMFK-DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 243 ACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVT 302
C+ L+LG +IH+ + + V ++L++MY K G + A KLF+ M +++VV
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 303 WNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM 362
WN MI G A HG+ + AL LF M + P+ +TF+ VL AC H GL+++G F SM
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIR-PDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 363 KTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEV 422
Y +EP+ +HY CMVDLLGR GKL EA +LI+ MP++P + G LL A + N E+
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVEL 471
Query: 423 AKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
A+ E++L L N +V L+N+YA W+DV R+RK MKE + KVPG+S +
Sbjct: 472 AEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 6/224 (2%)
Query: 99 NTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQV 155
N WN +I P+ L L+ M G P L CS L+ AL + +Q+
Sbjct: 248 NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS-ALQLGRQI 306
Query: 156 HAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS 215
H V K L D L+ Y G+L DA +F+ + + + W M+ GYAQ+ +
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM-RVKGVEVGVILGSA 274
++AL LF M+ P+ T +VL AC +G + +G E M R VE +
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 426
Query: 275 LVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHVE 317
+V++ + G + A KL MP R + + ++ H +VE
Sbjct: 427 MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVE 470
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 135/315 (42%), Gaps = 32/315 (10%)
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSN-EALALFEGMVAEGFEP 232
+ RC SGD+ A VF + +++ W +++ G +++ EA LF+ E EP
Sbjct: 68 IARCVR-SGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD----EIPEP 122
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
+ + +LS R+ E + + M K + ++ YA+ G + AR+LF
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW----NTMITGYARRGEMEKARELF 178
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
M E+N V+WN MI G G +E A F+ GV V + +++ +
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV-----VAWTAMITGYMKAKKV 233
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGA 409
++ +F M + + + M+ + + +L + M +P+ L +
Sbjct: 234 ELAEAMFKDMT----VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 410 LL----EASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
L E S ++ ++V++ L ++ SL +MY + GE D +L + MK
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLC---NDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 466 EERLKKVPGWSLVTT 480
+ K V W+ + +
Sbjct: 347 K---KDVVAWNAMIS 358
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 220/403 (54%), Gaps = 12/403 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A ++F + N W T+I AL L+ M R F ++
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVI 232
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC++ PA + QVH ++K G + +V+ L+ Y+ + D+R VFDE +
Sbjct: 233 TACAN-APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
++WT ++ GY+ N +AL++F GM+ PN +T AS L++C+ G L+ G+ +H
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
G+E +G++LV MY+ +G + A +F + ++++V+WN +I G A HG + A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 320 LSLFENM---EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKT-VYGIEPKIEHY 375
+F M KE P+++TF G+LSAC H G L+ GR +F M + + I+ KI+HY
Sbjct: 412 FVIFGQMIRLNKE----PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHY 467
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEP 435
CMVD+LGR GKL EA+ELI+ M KP+ ++ ALL A + + + + I L+
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS 527
Query: 436 DNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ +V LSN+YA AG W +V +LR MK+ + K PG S V
Sbjct: 528 KSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 5/272 (1%)
Query: 167 DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
D+ N +V Y G + DA +F ++P +++ WTTM+CG QN S EAL LF+ M+
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
+ V++ACA + +G ++H + G + ++L+ YA I
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
+RK+FD V W ++ G + + EDALS+F M + + +PN TF L++C
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI-LPNQSTFASGLNSC 336
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVI 406
G LD G+++ + G+E +V + G + +A + + +K +V
Sbjct: 337 SALGTLDWGKEMH-GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVS 394
Query: 407 LGALLEASKNIGNTEVAKVVTEEILAL--EPD 436
+++ G + A V+ +++ L EPD
Sbjct: 395 WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 180 VSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLAS 239
+S + +AR VF+++PS +SL+T M+ GY ++ +AL LF+ M + + S
Sbjct: 47 LSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNS 102
Query: 240 VLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN 299
++S C G + ++ + M E V+ +A+VN ++G + A +LF MP ++
Sbjct: 103 MISGCVECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKD 158
Query: 300 VVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
WN M+ G G V+DAL LF+ M + V
Sbjct: 159 TAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 238/511 (46%), Gaps = 73/511 (14%)
Query: 34 DPPTLAVLADKCTTVEQLK---QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASR 90
D TL + C +E LK Q+HAQ+++ D GDL AS
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC--GDLRMASY 243
Query: 91 IFSSIHQPN-------------------------------TFMWNTLIR---AQRHPQTA 116
+ I +P+ +WN++I A A
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 117 LSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGL------------ 164
L L+ MR T ++ AC L L KQ+H H KFGL
Sbjct: 304 LVLFNEMRNE-TREDSRTLAAVINACIGL-GFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 165 -------------------GLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
D+ + N +++ Y G + DA+ VF+ I ++SL W +M
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV 265
G++QN C+ E L F M + +L+SV+SACA LELGE++ + G+
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 266 EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFEN 325
+ ++ S+L+++Y K G + R++FD M + + V WN MI G AT+G +A+ LF+
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 326 MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRG 385
M G+ P +TF+ VL+AC + GL++ GR +F SMK +G P EH+ CMVDLL R
Sbjct: 542 MSVAGIR-PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 386 GKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLS 445
G + EA L++ MP+ D + ++L G + K E+I+ LEP+N +V LS
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLS 660
Query: 446 NMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
++A +G+W+ +RK M+E + K PG S
Sbjct: 661 AIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 167 DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
D + N +V ++ +G+L AR +F+ +P + + +++ GY N + EAL LF+ +
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL- 181
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
F + TL +VL ACA L+ G++IH + + GVE + S+LVN+YAK G +
Sbjct: 182 --NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 287 MA-------------------------------RKLFDGMPERNVVTWNGMICGLATHGH 315
MA R LFD R V+ WN MI G +
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
+AL LF M E + T V++AC G L+ G+ + C +G+ I
Sbjct: 300 KMEALVLFNEMRNE--TREDSRTLAAVINACIGLGFLETGKQMHCH-ACKFGLIDDIVVA 356
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
++D+ + G +EA +L + D ++L ++++ + G + AK V E I
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRVFERI 410
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM-E 327
VI+ + L+ MY+++G + +AR LFD MP+RN +WN MI G G +L F+ M E
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 328 KEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM--KTVYGIEPKIEHYGCMVDLLGRG 385
++G ++ V+S G L V R +F +M K V + + Y +L
Sbjct: 122 RDG------YSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGY-----IL--N 168
Query: 386 GKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVHVS 443
G EA L K + + D + L +L+A + + K + +IL +E D+ ++ S
Sbjct: 169 GYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSK-MNSS 227
Query: 444 LSNMYAEAGEWQDVLRLRKTMKEE 467
L N+YA+ G+ LR+ M E+
Sbjct: 228 LVNVYAKCGD----LRMASYMLEQ 247
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 179/305 (58%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N ++ G++ AR VFD + R+ + W T++ + +N EAL LF M +G
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
P TL S+LS CA L G+++H + +V V + S L+ MY K G + ++ +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
FD P ++++ WN +I G A+HG E+AL +F M G PN+VTF+ LSAC + G+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
++ G ++ SM++V+G++P HY CMVD+LGR G+ EA E+I M +PD + G+LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 412 EASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKK 471
A + +VA+ ++++ +EP+N G ++ LSNMYA G W DV LRK MK ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 472 VPGWS 476
PG S
Sbjct: 569 SPGCS 573
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 7/243 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
G++ A R+F S+ + N W T+I+ AL L+I M++ G P T +L
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C+SL +L KQVHA +++ +D +VA+ L+ Y G+LV ++ +FD PS+ +
Sbjct: 339 SVCASLA-SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERIHE 258
+W +++ GYA + EAL +F M G +PN T + LSAC+ +G +E G +I+E
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 259 FMR-VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHV 316
M V GV+ + +V+M + G A ++ D M E + W ++ TH +
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Query: 317 EDA 319
+ A
Sbjct: 518 DVA 520
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 28/352 (7%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G++ A ++F + + N W L++ H A SL+ M + L
Sbjct: 93 GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL 152
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ + A +++ + D+ ++ G + +AR +FDE+ RS+
Sbjct: 153 QD-GRIDDACKLYEMIPDK--------DNIARTSMIHGLCKEGRVDEAREIFDEMSERSV 203
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WTTMV GY QN ++A +F+ M E + S+L ++G +E E + E
Sbjct: 204 ITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
M VK V I +A+++ + G IA AR++FD M ERN +W +I +G +A
Sbjct: 260 MPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEA 315
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCM 378
L LF M+K+GV P T I +LS C L G+ V + + + ++ + +
Sbjct: 316 LDLFILMQKQGVR-PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA--SVL 372
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE--ASKNIGNTEVAKVVTE 428
+ + + G+L+++K + P K D+++ +++ AS +G E KV E
Sbjct: 373 MTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHGLGE-EALKVFCE 422
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 145/308 (47%), Gaps = 25/308 (8%)
Query: 171 ANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGF 230
AN + S G + +AR +FD S+S+S W +MV GY N +A LF+ M
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP---- 75
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
+ N + ++S ++G ++ ++ + M E V+ +ALV Y NG + +A
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVAES 131
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
LF MPE+N V+W M+ G G ++DA L+E + + +++ ++ C G
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK-----DNIARTSMIHGLCKEG 186
Query: 351 LLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGAL 410
+D R++F M E + + MV G+ ++ +A+++ MP K +V L
Sbjct: 187 RVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSML 241
Query: 411 LEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
+ +N G E A+ + E++ ++P ++ + M + G+ ++ + R+ + +
Sbjct: 242 MGYVQN-GRIEDAEELF-EVMPVKP-----VIACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 471 KVPGWSLV 478
W V
Sbjct: 295 NDASWQTV 302
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 200/357 (56%), Gaps = 2/357 (0%)
Query: 122 TMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVS 181
+++R G + +++C L H LK G D ++ + LV Y S
Sbjct: 110 SVKRDGWSFDAYGLSSAVRSCG-LNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 182 GDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVL 241
G++ +A VF+E+P R++ WT M+ G+AQ + + L L+ M +PN T ++L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 242 SACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVV 301
SAC SG L G +H G++ + + ++L++MY K G + A ++FD ++VV
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
+WN MI G A HG A+ LFE M + P+ +T++GVLS+C H GL+ GR F +
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-N 347
Query: 362 MKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTE 421
+ +G++P++ HY C+VDLLGR G L EA ELI+ MP KP+ VI G+LL + + G+
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 422 VAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
EE L LEPD HV L+N+YA G W++ +RK MK++ LK PG S +
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWI 464
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 6/239 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G++ +A ++F + + N W +I + L LY MR+ + P +TF LL
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC+ + AL + VH L GL H++N L+ Y GDL DA +FD+ ++ +
Sbjct: 229 SACTG-SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAE-GFEPNGATLASVLSACARSGCLELGERIHE 258
W +M+ GYAQ+ + +A+ LFE M+ + G +P+ T VLS+C +G ++ G +
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHV 316
M G++ + S LV++ + G + A +L + MP + N V W ++ HG V
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 212/401 (52%), Gaps = 9/401 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
GD+ A +F+S+ +T WN++I A+ L+ M T+ L+
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ L L K +H++ +K G+ +D V+N L+ Y+ G++ D+ +F + +
Sbjct: 416 SVSTRLAD-LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 200 SLWTTMV--CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
W T++ C +F + L + M P+ AT L CA LG+ IH
Sbjct: 475 VTWNTVISACVRFGDFAT--GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIH 532
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G E + +G+AL+ MY+K G + + ++F+ M R+VVTW GMI +G E
Sbjct: 533 CCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGE 592
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
AL F +MEK G+ VP+ V FI ++ AC H GL+D G F MKT Y I+P IEHY C
Sbjct: 593 KALETFADMEKSGI-VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYAC 651
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
+VDLL R K+ +A+E I+ MP KPD I ++L A + G+ E A+ V+ I+ L PD+
Sbjct: 652 VVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDD 711
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G + SN YA +W V +RK++K++ + K PG+S +
Sbjct: 712 PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 179/353 (50%), Gaps = 15/353 (4%)
Query: 99 NTFMWNTLIRAQRH----PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
N ++WN++IRA P+ AL Y +R P K+TFP ++KAC+ L A +
Sbjct: 70 NVYLWNSIIRAFSKNGLFPE-ALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA-EMGDL 127
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
V+ +L G D V N LV YS G L AR VFDE+P R L W +++ GY+ +
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 215 SNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSA 274
EAL ++ + P+ T++SVL A ++ G+ +H F GV V++ +
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF-ENMEKEGVAV 333
LV MY K AR++FD M R+ V++N MICG VE+++ +F EN+++
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ---FK 304
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCMVDLLGRGGKLLEAK 392
P+ +T VL AC H L + + ++ M K + +E + + ++D+ + G ++ A+
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITAR 362
Query: 393 ELIKGMPWKPDVVILGALLEASKNIGN-TEVAKVVTEEILALEPDNHGVHVSL 444
++ M K D V +++ G+ E K+ ++ E +H ++ L
Sbjct: 363 DVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 123/220 (55%), Gaps = 5/220 (2%)
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI- 194
PF+ +A SS + L +++HA V+ GL + L+ YS + + VF +
Sbjct: 8 PFISRALSS-SSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
P++++ LW +++ +++N EAL + + P+ T SV+ ACA E+G+
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
++E + G E + +G+ALV+MY++ G + AR++FD MP R++V+WN +I G ++HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDV 354
+ E+AL ++ ++ + VP+ T VL A G LL V
Sbjct: 187 YYEEALEIYHELKNSWI-VPDSFTVSSVLPA--FGNLLVV 223
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 161/340 (47%), Gaps = 6/340 (1%)
Query: 86 THASRIFSSIHQPNTFMWNTLIRAQ-RHPQTALSLYITMRRHGAL-PGKHTFPFLLKACS 143
T A R+F + ++ +NT+I + S+ + + P T +L+AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACG 318
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
L L + K ++ ++LK G L+S V N L+ Y+ GD++ AR VF+ + + W
Sbjct: 319 HLRD-LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
+++ GY Q+ EA+ LF+ M+ + + T ++S R L+ G+ +H
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G+ + + + +AL++MYAK G + + K+F M + VTWN +I G L +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
M K V VP+ TF+ L C +G+++ C + +G E +++ ++++
Sbjct: 498 TQMRKSEV-VPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYS 555
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
+ G L + + + M + DVV ++ A G E A
Sbjct: 556 KCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKA 594
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 210/399 (52%), Gaps = 6/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
G + A ++F + + ++ W +I+ + A+ + M+ G ++ F +L
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC L A+ KQ+HA +++ +V + L+ Y L A+ VFD + +++
Sbjct: 278 PACGGLG-AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT MV GY Q + EA+ +F M G +P+ TL +SACA LE G + H
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
G+ V + ++LV +Y K G I + +LF+ M R+ V+W M+ A G +
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ LF+ M + G+ P+ VT GV+SAC GL++ G+ F M + YGI P I HY CM+
Sbjct: 457 IQLFDKMVQHGLK-PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DL R G+L EA I GMP+ PD + LL A +N GN E+ K E ++ L+P +
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ LS++YA G+W V +LR+ M+E+ +KK PG S +
Sbjct: 576 GYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 175/418 (41%), Gaps = 71/418 (16%)
Query: 86 THASRIFSSIHQPNTFMWNTLIRA--------------QRHPQ----------------- 114
T+A R+F I QPN F WN L+ A ++ P
Sbjct: 58 TYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSG 117
Query: 115 ---TALSLYITM-RRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHV 170
A+ Y TM R A + T +LK SS + + KQ+H V+K G V
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS-NGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 171 ANGLVRCYSVSGDLVDARFVFDEIPSRSLSL----------------------------- 201
+ L+ Y+ G + DA+ VF + R+ +
Sbjct: 177 GSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
Query: 202 -WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W M+ G AQN + EA+ F M +G + + SVL AC G + G++IH +
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
+ + +GSAL++MY K + A+ +FD M ++NVV+W M+ G G E+A+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+F +M++ G+ P+ T +SAC + L+ G F G+ + +V
Sbjct: 357 KIFLDMQRSGID-PDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVT 414
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPD 436
L G+ G + ++ L M + D V A++ A G + ++++ L+PD
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 218/399 (54%), Gaps = 5/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLL 139
G + A R+F I + N + + ++I + A L+ M + HTF +L
Sbjct: 172 GMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVML 231
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+A + L ++ V KQ+H LK G+ ++ V+ GL+ YS GD+ DAR F+ +P ++
Sbjct: 232 RASAGL-GSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTT 290
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W ++ GYA + S EAL L M G + TL+ ++ + LEL ++ H
Sbjct: 291 VAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHAS 350
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G E ++ +ALV+ Y+K G + AR +FD +P +N+++WN ++ G A HG DA
Sbjct: 351 LIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDA 410
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ LFE M VA PN VTF+ VLSAC + GL + G ++F SM V+GI+P+ HY CM+
Sbjct: 411 VKLFEKMIAANVA-PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMI 469
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
+LLGR G L EA I+ P K V + ALL A + N E+ +VV E++ + P+ G
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLG 529
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V + NMY G+ + + +T++ + L +P + V
Sbjct: 530 NYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWV 568
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 159/323 (49%), Gaps = 5/323 (1%)
Query: 131 GKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFV 190
G T+ L++AC L V K+V+ ++ G + ++ N ++ + G ++DAR +
Sbjct: 122 GVSTYDALVEACIRLKSIRCV-KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRL 180
Query: 191 FDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL 250
FDEIP R+L + +++ G+ EA LF+ M E + T A +L A A G +
Sbjct: 181 FDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSI 240
Query: 251 ELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGL 310
+G+++H GV + L++MY+K G I AR F+ MPE+ V WN +I G
Sbjct: 241 YVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGY 300
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
A HG+ E+AL L +M GV++ + T ++ L++ + S+ G E
Sbjct: 301 ALHGYSEEALCLLYDMRDSGVSI-DQFTLSIMIRISTKLAKLELTKQAHASL-IRNGFES 358
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN-TEVAKVVTEE 429
+I +VD + G++ A+ + +P + +++ AL+ N G T+ K+ +
Sbjct: 359 EIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Query: 430 ILALEPDNHGVHVSLSNMYAEAG 452
I A NH +++ + A +G
Sbjct: 418 IAANVAPNHVTFLAVLSACAYSG 440
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Query: 217 EALALFEGM-VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
EA LFE + + F+ +T +++ AC R + +R++ FM G E + + +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 276 VNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPN 335
+ M+ K G I AR+LFD +PERN+ ++ +I G G+ +A LF+ M +E ++
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE-LSDCE 223
Query: 336 DVTFIGVLSACCHGGLLDVGRDV-FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL 394
TF +L A G + VG+ + C++K G+ ++D+ + G + +A+
Sbjct: 224 THTFAVMLRASAGLGSIYVGKQLHVCALKL--GVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 395 IKGMPWKPDV 404
+ MP K V
Sbjct: 282 FECMPEKTTV 291
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 186/306 (60%), Gaps = 4/306 (1%)
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAE-GFEP 232
++ Y D+ AR +FD +P R+L W TM+ GY QN E + LF+ M A +P
Sbjct: 213 MIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDP 272
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
+ T+ SVL A + +G L LGE H F++ K ++ V + +A+++MY+K G I A+++F
Sbjct: 273 DDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIF 332
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
D MPE+ V +WN MI G A +G+ AL LF M E P+++T + V++AC HGGL+
Sbjct: 333 DEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE--EKPDEITMLAVITACNHGGLV 390
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
+ GR F M+ + G+ KIEHYGCMVDLLGR G L EA++LI MP++P+ +IL + L
Sbjct: 391 EEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLS 449
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
A + E A+ + ++ + LEP N G +V L N+YA W D ++ M++ + KK
Sbjct: 450 ACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKE 509
Query: 473 PGWSLV 478
G SL+
Sbjct: 510 VGCSLI 515
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 168/342 (49%), Gaps = 15/342 (4%)
Query: 87 HASRIFSSIHQ-PNTFMWNTLIRA---QRHPQTALSLYITMRRHGAL-PGKHTFPFLLKA 141
+A ++F Q ++F+ N++I+A R + +LY +R+ P TF L K+
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
CS L+ + Q+H+ + +FG D +V+ G+V Y+ G + AR FDE+P RS
Sbjct: 88 CS-LSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
WT ++ GY + + A LF+ M + +++ +SG + R+ + M
Sbjct: 147 WTALISGYIRCGELDLASKLFDQM---PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
K V I + +++ Y I ARKLFD MPERN+V+WN MI G + ++ +
Sbjct: 204 HKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
LF+ M+ P+DVT + VL A G L +G C ++ ++ K++ ++D+
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR-KKLDKKVKVCTAILDM 318
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
+ G++ +AK + MP K V A++ GN A
Sbjct: 319 YSKCGEIEKAKRIFDEMPEK-QVASWNAMIHGYALNGNARAA 359
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGAL-PGKHTFPFLL 139
D+ A ++F ++ + N WNT+I + PQ + L+ M+ +L P T +L
Sbjct: 222 DIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
A S T AL + + H V + L V ++ YS G++ A+ +FDE+P + +
Sbjct: 282 PAISD-TGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
+ W M+ GYA N + AL LF M+ E +P+ T+ +V++AC G +E G +
Sbjct: 341 ASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHV 399
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVED 318
MR G+ + +V++ + G++ A L MP E N + + + + +E
Sbjct: 400 MREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIER 459
Query: 319 A 319
A
Sbjct: 460 A 460
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 220/400 (55%), Gaps = 10/400 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPF-- 137
G L A ++F + + +++ W ++ + P+ AL LY M+R +P F
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR---VPNSRPNIFTV 221
Query: 138 -LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
+ A ++ + K++H H+++ GL D + + L+ Y G + +AR +FD+I
Sbjct: 222 SIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE 281
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
+ + WT+M+ Y ++ E +LF +V PN T A VL+ACA ELG+++
Sbjct: 282 KDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H +M G + S+LV+MY K G I A+ + DG P+ ++V+W +I G A +G
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
++AL F+ + K G P+ VTF+ VLSAC H GL++ G + F S+ + + +HY
Sbjct: 402 DEALKYFDLLLKSGTK-PDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT 460
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
C+VDLL R G+ + K +I MP KP + ++L GN ++A+ +E+ +EP+
Sbjct: 461 CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE 520
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
N +V+++N+YA AG+W++ ++RK M+E + K PG S
Sbjct: 521 NPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 174/400 (43%), Gaps = 50/400 (12%)
Query: 90 RIFSSIHQPNTFMWNTLIRAQRHP--------QTALSLYITMRRHGALPGKHTFPFLLKA 141
+ F+ H+ + L RA R Q L + + P T+ L++
Sbjct: 35 KFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQV 94
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
CS T AL K+VH H+ G + N L+R Y+ G LVDAR VFDE+P+R L
Sbjct: 95 CSQ-TRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCS 153
Query: 202 W-------------------------------TTMVCGYAQNFCSNEALALFEGMV-AEG 229
W T MV GY + EAL L+ M
Sbjct: 154 WNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPN 213
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMAR 289
PN T++ ++A A C+ G+ IH + G++ +L S+L++MY K G I AR
Sbjct: 214 SRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEAR 273
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
+FD + E++VV+W MI + SLF + PN+ TF GVL+AC
Sbjct: 274 NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADL 332
Query: 350 GLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGA 409
++G+ V M V G +P +VD+ + G + AK ++ G P KPD+V +
Sbjct: 333 TTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTS 390
Query: 410 LLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVHVSLSNM 447
L+ G + A + +L +PD HV+ N+
Sbjct: 391 LIGGCAQNGQPDEALKYFDLLLKSGTKPD----HVTFVNV 426
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 118/305 (38%), Gaps = 65/305 (21%)
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
C + L ++ +P +T +++ C+++ LE G+++HE +R G G+++
Sbjct: 64 LCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIW 123
Query: 273 SALVNMYAKNGAIA-------------------------------MARKLFDGMPERNVV 301
+ L+ MYAK G++ ARKLFD M E++
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF-----IGVLSAC------CHGG 350
+W M+ G E+AL L+ M++ + PN T C HG
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 351 LLDVGRD----VFCSMKTVYG---------------IEPKIEHYGCMVDLLGRGGKLLEA 391
++ G D ++ S+ +YG +E + + M+D + + E
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREG 303
Query: 392 KELIK---GMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG-VHVSLSNM 447
L G +P+ +L A ++ E+ K V + + D + SL +M
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 448 YAEAG 452
Y + G
Sbjct: 364 YTKCG 368
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 209/400 (52%), Gaps = 10/400 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
G++++A RIF+ + Q N WN +I R R L ++G P T L
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L A A+ + +H + ++ G + L+ Y G L A +FD + ++
Sbjct: 341 LPA-----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN 395
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W +++ Y QN + AL LF+ + P+ T+AS+L A A S L G IH
Sbjct: 396 VISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHA 455
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
++ I+ ++LV+MYA G + ARK F+ + ++VV+WN +I A HG
Sbjct: 456 YIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRI 515
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
++ LF M V PN TF +L+AC G++D G + F SMK YGI+P IEHYGCM
Sbjct: 516 SVWLFSEMIASRVN-PNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCM 574
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
+DL+GR G AK ++ MP+ P I G+LL AS+N + +A+ E+I +E DN
Sbjct: 575 LDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNT 634
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G +V L NMYAEAG W+DV R++ M+ + + + S V
Sbjct: 635 GCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTV 674
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 194/375 (51%), Gaps = 18/375 (4%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKA 141
+ A ++F +++ + F+WN +I+ A+ Y M G T+PF++K+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
+ ++ +L K++HA V+K G D +V N L+ Y G DA VF+E+P R +
Sbjct: 140 VAGIS-SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W +M+ GY +L LF+ M+ GF+P+ + S L AC+ ++G+ IH
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 262 VKGVEVG-VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
+E G V++ +++++MY+K G ++ A ++F+GM +RN+V WN MI A +G V DA
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYGIEPKIEHYGCMV 379
F+ M ++ P+ +T I +L A +L+ GR + +M+ G P + ++
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPA---SAILE-GRTIHGYAMRR--GFLPHMVLETALI 372
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDV---VILGALLEASKNIGNTEVAKVVTEEILALEPD 436
D+ G G+L A+ + M K + I+ A ++ KN E+ + + + +L PD
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS--SLVPD 430
Query: 437 NHGVHVSLSNMYAEA 451
+ + S+ YAE+
Sbjct: 431 STTI-ASILPAYAES 444
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 175 VRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNG 234
+R ++ S + DA +FDE+ LW M+ G+ EA+ + MV G + +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 235 ATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDG 294
T V+ + A LE G++IH + G V + ++L+++Y K G A K+F+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 295 MPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDV 354
MPER++V+WN MI G G +L LF+ M K G P+ + + L AC H +
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK-PDRFSTMSALGACSHVYSPKM 249
Query: 355 GRDVFCSMKTVYGIEPKIEHYGCMV-----DLLGRGGKLLEAKELIKGM 398
G+++ C + + +IE MV D+ + G++ A+ + GM
Sbjct: 250 GKEIHC-----HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 224/418 (53%), Gaps = 43/418 (10%)
Query: 102 MWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKA-CSSLTPALPVHKQVHA 157
++NTLIR+ +T+L+L+ M P TFP L+KA CSS + + V +H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV--ALHG 110
Query: 158 HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI----------------------- 194
LK G D V VR Y GDL +R +FD+I
Sbjct: 111 QALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDY 170
Query: 195 --------PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG---FEPNGATLASVLSA 243
P + WTT++ G+++ +AL +F M+ PN AT SVLS+
Sbjct: 171 AFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSS 230
Query: 244 CAR--SGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVV 301
CA G + LG++IH ++ K + + LG+AL++MY K G + MA +FD + ++ V
Sbjct: 231 CANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVC 290
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
WN +I LA++G + AL +FE M K PN +T + +L+AC L+D+G +F S
Sbjct: 291 AWNAIISALASNGRPKQALEMFE-MMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 362 MKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTE 421
+ + Y I P EHYGC+VDL+GR G L++A I+ +P++PD +LGALL A K NTE
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
Query: 422 VAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVT 479
+ V ++++ L+P + G +V+LS A W + ++RK M E ++K+P +S++T
Sbjct: 410 LGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVLT 467
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLY---ITMRRHGALPGKHTFP 136
G++ +A F + + W T+I AL ++ I R P + TF
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 137 FLLKACSSLTPA-LPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
+L +C++ + + KQ+H +V+ + L + + L+ Y +GDL A +FD+I
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+ + W ++ A N +AL +FE M + PNG TL ++L+ACARS ++LG
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 219/401 (54%), Gaps = 14/401 (3%)
Query: 88 ASRIFSSI-HQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACS 143
A ++F + + ++ +WN L+ + AL ++ MR G +HT +L A +
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFT 273
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
++ + + +H +K G G D V+N L+ Y S L +A +F+ + R L W
Sbjct: 274 -VSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 204 TMVCGYAQNFCSNE--ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+++C ++C + LALFE M+ G P+ TL +VL C R L G IH +M
Sbjct: 333 SVLC--VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMI 390
Query: 262 VKGV----EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
V G+ + ++L++MY K G + AR +FD M ++ +WN MI G E
Sbjct: 391 VSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 450
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
AL +F M + GV P+++TF+G+L AC H G L+ GR+ M+TVY I P +HY C
Sbjct: 451 LALDMFSCMCRAGVK-PDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYAC 509
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
++D+LGR KL EA EL P + V+ ++L + + GN ++A V + + LEP++
Sbjct: 510 VIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEH 569
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G +V +SN+Y EAG++++VL +R M+++ +KK PG S +
Sbjct: 570 CGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 169/357 (47%), Gaps = 12/357 (3%)
Query: 52 KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIRA-- 109
+Q+H MV F D G + A +F + + F +N LI
Sbjct: 80 QQIHGFMVRKG-FLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFV 137
Query: 110 -QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDS 168
P A+ Y MR +G LP K+TFP LLK ++ L K+VH K G D
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM--ELSDVKKVHGLAFKLGFDSDC 195
Query: 169 HVANGLVRCYSVSGDLVDARFVFDEIPSRSLS-LWTTMVCGYAQNFCSNEALALFEGMVA 227
+V +GLV YS + DA+ VFDE+P R S LW +V GY+Q F +AL +F M
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
EG + T+ SVLSA SG ++ G IH G +++ +AL++MY K+ +
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 288 ARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
A +F+ M ER++ TWN ++C G + L+LFE M G+ P+ VT VL C
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR-PDIVTLTTVLPTCG 374
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEH---YGCMVDLLGRGGKLLEAKELIKGMPWK 401
L GR++ M + K + + ++D+ + G L +A+ + M K
Sbjct: 375 RLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKG-VEVGVILGSALVNMYAKNGAIAMARKL 291
N AT + L CA+ G++IH FM KG ++ G++LVNMYAK G + A +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
F G ER+V +N +I G +G DA+ + M G+ +P+ TF +L L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGI-LPDKYTFPSLLKGSDAMEL 176
Query: 352 LDVGRDVFCSMKTVYGIEPKIE-HYGCMV--DLLGRGGKLL---EAKELIKGMPWKPDVV 405
DV K V+G+ K+ C V L+ K + +A+++ +P + D V
Sbjct: 177 SDV--------KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV 228
Query: 406 ILGALLEASKNIGNTEVAKVVTEEI 430
+ AL+ I E A +V ++
Sbjct: 229 LWNALVNGYSQIFRFEDALLVFSKM 253
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 214/396 (54%), Gaps = 11/396 (2%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRR-HGALPGKHTFPFLLKACS 143
A R+F + +P+ W ++ A + AL L+ M R G +P TF +L AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
+L L K++H ++ G+G + V + L+ Y G + +AR VF+ + ++ W+
Sbjct: 277 NLRR-LKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
++ GY QN +A+ +F M E + +VL ACA + LG+ IH +
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G VI+ SAL+++Y K+G I A +++ M RN++TWN M+ LA +G E+A+S F
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
+M K+G+ P+ ++FI +L+AC H G++D GR+ F M YGI+P EHY CM+DLLG
Sbjct: 452 NDMVKKGIK-PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLG 510
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALL-EASKNIGNTEVAKVVTEEILALEPDNHGVHV 442
R G EA+ L++ + D + G LL + N + VA+ + + ++ LEP H +V
Sbjct: 511 RAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYV 570
Query: 443 SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LSNMY G D L +RK M + K G S +
Sbjct: 571 LLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 18/304 (5%)
Query: 135 FPFLLKACSSLTPALPVHK-QVHAHVLKFGLGLDSHVANGLVRCYSVSG-------DLVD 186
+ LL+ C+ + +H Q HAHV+K GL D +V N L+ Y G + D
Sbjct: 64 YASLLQTCNKVFSF--IHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD 121
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACAR 246
RFV D I WT+M+ GY +AL +F MV+ G + N TL+S + AC+
Sbjct: 122 GRFVKDAIS------WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 247 SGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
G + LG H + G E + S L +Y N AR++FD MPE +V+ W +
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAV 235
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
+ + + E+AL LF M + VP+ TF VL+AC + L G+++ + T
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT-N 294
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVV 426
GI + ++D+ G+ G + EA+++ GM K + V ALL G E A +
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 427 TEEI 430
E+
Sbjct: 354 FREM 357
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 200/373 (53%), Gaps = 3/373 (0%)
Query: 106 LIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLG 165
LI + H + L L+ MRR P T+ L ACS + + +Q+HA + K+G+
Sbjct: 231 LIENELH-EDGLRLFSLMRRGLVHPNSVTYLSALAACSG-SQRIVEGQQIHALLWKYGIE 288
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM 225
+ + + L+ YS G + DA +F+ T ++ G AQN EA+ F M
Sbjct: 289 SELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM 348
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
+ G E + +++VL L LG+++H + + + + L+NMY+K G +
Sbjct: 349 LQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDL 408
Query: 286 AMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
++ +F MP+RN V+WN MI A HGH AL L+E M V P DVTF+ +L A
Sbjct: 409 TDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK-PTDVTFLSLLHA 467
Query: 346 CCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
C H GL+D GR++ MK V+GIEP+ EHY C++D+LGR G L EAK I +P KPD
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCK 527
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
I ALL A G+TEV + E++ PD+ H+ ++N+Y+ G+W++ + K MK
Sbjct: 528 IWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMK 587
Query: 466 EERLKKVPGWSLV 478
+ K G S +
Sbjct: 588 AMGVTKETGISSI 600
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 136/298 (45%), Gaps = 24/298 (8%)
Query: 96 HQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPAL--PVHK 153
+Q +TF+ N H +L L I R G P H P L A P PV
Sbjct: 35 YQVSTFLLN-------HVDMSLLLSIC-GREGWFP--HLGP-CLHASIIKNPEFFEPVDA 83
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
+H + L V N L+ Y+ G LVDA +FDE+P R + + G+ +N
Sbjct: 84 DIHRNALV--------VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNR 135
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
+ L + M+ G + ATL VLS C + + IH + G + + +G+
Sbjct: 136 ETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGN 194
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
L+ Y K G R +FDGM RNV+T +I GL + ED L LF M + G+
Sbjct: 195 KLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM-RRGLVH 253
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
PN VT++ L+AC + G+ + ++ YGIE ++ ++D+ + G + +A
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIH-ALLWKYGIESELCIESALMDMYSKCGSIEDA 310
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 233/440 (52%), Gaps = 48/440 (10%)
Query: 83 GDLTHASRIFSSIH----QPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHT 134
G L RI S + + N WN ++ R+ H + A+ ++ + G P + T
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE-AVVMFQKIHHLGFCPDQVT 254
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGD----------- 183
+L + + L + + +H +V+K GL D V + ++ Y SG
Sbjct: 255 VSSVLPSVGD-SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 184 -------------------LVD-ARFVFDEIPSRSLSL----WTTMVCGYAQNFCSNEAL 219
LVD A +F+ +++ L WT+++ G AQN EAL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 220 ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF-MRVKGVEVGVILGSALVNM 278
LF M G +PN T+ S+L AC L G H F +RV ++ V +GSAL++M
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDM 432
Query: 279 YAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVT 338
YAK G I +++ +F+ MP +N+V WN ++ G + HG ++ +S+FE++ + + P+ ++
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK-PDFIS 491
Query: 339 FIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
F +LSAC GL D G F M YGI+P++EHY CMV+LLGR GKL EA +LIK M
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 399 PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVL 458
P++PD + GALL + + N ++A++ E++ LEP+N G +V LSN+YA G W +V
Sbjct: 552 PFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVD 611
Query: 459 RLRKTMKEERLKKVPGWSLV 478
+R M+ LKK PG S +
Sbjct: 612 SIRNKMESLGLKKNPGCSWI 631
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 188/450 (41%), Gaps = 95/450 (21%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKA 141
A + SI P + +++LI A + ++ ++ M HG +P H P L K
Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV 125
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
C+ L+ A V KQ+H GL +D+ V + Y G + DAR VFD + + +
Sbjct: 126 CAELS-AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 202 WTTMVCGYAQNFC-----------------------------------SNEALALFEGMV 226
+ ++C YA+ C EA+ +F+ +
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK----- 281
GF P+ T++SVL + S L +G IH ++ +G+ + SA+++MY K
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 282 --------------------------NGAIAMARKLFDGMPER----NVVTWNGMICGLA 311
NG + A ++F+ E+ NVV+W +I G A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
+G +AL LF M+ GV PN VT +L AC + L GR + +G +
Sbjct: 365 QNGKDIEALELFREMQVAGVK-PNHVTIPSMLPACGNIAALGHGR-------STHGFAVR 416
Query: 372 IE-----HYG-CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKV 425
+ H G ++D+ + G++ ++ + MP K ++V +L+ G +
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMS 475
Query: 426 VTEEIL--ALEPDNHGVHVSLSNMYAEAGE 453
+ E ++ L+PD +S +++ + G+
Sbjct: 476 IFESLMRTRLKPD----FISFTSLLSACGQ 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
Q HA +LK G D +++ L+ YS DA V IP ++ +++++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
+++ +F M + G P+ L ++ CA ++G++IH V G+++ +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
++ +MY + G + ARK+FD M +++VVT + ++C A G +E+ + + ME G+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 334 PNDVTFIGVLSA 345
N V++ G+LS
Sbjct: 216 -NIVSWNGILSG 226
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 219/398 (55%), Gaps = 10/398 (2%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQRHPQTA---LSLYITMRRHGALPGKHTFPFLLKACSS 144
A IF I N W TLI H L +Y M A + ++A +S
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
+ ++ KQ+HA V+K G + V N ++ Y G L +A+ F E+ + L W T
Sbjct: 226 ID-SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
++ ++ S+EAL +F+ ++GF PN T S+++ACA L G+++H + +G
Sbjct: 285 LISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLF-DGMPERNVVTWNGMICGLATHGHVEDALSLF 323
V L +AL++MYAK G I ++++F + + RN+V+W M+ G +HG+ +A+ LF
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
+ M G+ P+ + F+ VLSAC H GL++ G F M++ YGI P + Y C+VDLLG
Sbjct: 404 DKMVSSGIR-PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASK-NIGNTEVAKVVTEEILALEPDNHGVHV 442
R GK+ EA EL++ MP+KPD GA+L A K + N ++++ +++ L+P G +V
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 443 SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPG--WSLV 478
LS +YA G+W D R+RK M+ KK G W LV
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILV 560
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQT--ALSLYITMRRHGALPGKHTFPFLLK 140
G L+ A F + + WNTLI + AL ++ G +P +TF L+
Sbjct: 262 GYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVA 321
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI-PSRSL 199
AC+++ AL +Q+H + + G + +AN L+ Y+ G++ D++ VF EI R+L
Sbjct: 322 ACANIA-ALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNL 380
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT+M+ GY + EA+ LF+ MV+ G P+ +VLSAC +G +E G +
Sbjct: 381 VSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNV 440
Query: 260 MRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGH 315
M + G+ + + +V++ + G I A +L + MP + + TW ++ H H
Sbjct: 441 MESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 16/271 (5%)
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
SS P +K H+L A L+ Y G + +AR +FDE+P R + W
Sbjct: 30 SSQNTEYPPYKPKKHHIL----------ATNLIVSYFEKGLVEEARSLFDEMPDRDVVAW 79
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
T M+ GYA + + A F MV +G PN TL+SVL +C L G +H +
Sbjct: 80 TAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK 139
Query: 263 KGVEVGVILGSALVNMYAK-NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
G+E + + +A++NMYA + + A +F + +N VTW +I G G L
Sbjct: 140 LGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLK 199
Query: 322 LFENMEKEGVAV-PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+++ M E V P +T SA + G+ + S+ G + + ++D
Sbjct: 200 MYKQMLLENAEVTPYCITIAVRASASIDS--VTTGKQIHASV-IKRGFQSNLPVMNSILD 256
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
L R G L EAK M K D++ L+
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDK-DLITWNTLI 286
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 226/426 (53%), Gaps = 37/426 (8%)
Query: 88 ASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A R+F N + N + Q + AL ++ M G P + + + +CS
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLV----RC----------------------- 177
L L K H +VL+ G ++ N L+ +C
Sbjct: 350 LRNIL-WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 178 ----YSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVA-EGFEP 232
Y +G++ A F+ +P +++ W T++ G Q EA+ +F M + EG
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
+G T+ S+ SAC G L+L + I+ ++ G+++ V LG+ LV+M+++ G A +F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
+ + R+V W I +A G+ E A+ LF++M ++G+ P+ V F+G L+AC HGGL+
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK-PDGVAFVGALTACSHGGLV 587
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
G+++F SM ++G+ P+ HYGCMVDLLGR G L EA +LI+ MP +P+ VI +LL
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
A + GN E+A E+I L P+ G +V LSN+YA AG W D+ ++R +MKE+ L+K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 473 PGWSLV 478
PG S +
Sbjct: 708 PGTSSI 713
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 169/342 (49%), Gaps = 23/342 (6%)
Query: 31 TRQDPPTLAVLADKCTTVEQLKQVHAQMVVTARFND-HXXXXXXXXXXXXXXXGDLTHAS 89
T+ P +L C T+++LK H + ND L+ A
Sbjct: 32 TKATPSSLK----NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 90 RIFSSIHQPNT-FMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
+F + T FM+N+LIR A+ L++ M G P K+TFPF L AC+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK- 146
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
+ A Q+H ++K G D V N LV Y+ G+L AR VFDE+ R++ WT+M
Sbjct: 147 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 206 VCGYAQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
+CGYA+ + +A+ LF MV E PN T+ V+SACA+ LE GE+++ F+R G
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+EV ++ SALV+MY K AI +A++LFD N+ N M G +AL +F
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 325 NMEKEGVAVPNDVTFIGVLSAC-----------CHGGLLDVG 355
M GV P+ ++ + +S+C CHG +L G
Sbjct: 327 LMMDSGVR-PDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 10/290 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI--RAQRH-PQTALSLYITM-RRHGALPGKHTFPFL 138
G+L A ++F + + N W ++I A+R + A+ L+ M R P T +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+ AC+ L L ++V+A + G+ ++ + + LV Y + A+ +FDE + +
Sbjct: 243 ISACAKLED-LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
L L M Y + + EAL +F M+ G P+ ++ S +S+C++ + G+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
++ G E + +AL++MY K A ++FD M + VVTWN ++ G +G V+
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGI 368
A FE M ++ + V++ ++S G L + +VFCSM++ G+
Sbjct: 422 AWETFETMPEKNI-----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLV--RC-YSVSGDLVDARFVFD 192
P LK C ++ K H + K GL D LV C L A+ VF+
Sbjct: 36 PSSLKNCKTIDEL----KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFE 91
Query: 193 EIPSR-SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
S + ++ +++ GYA + NEA+ LF M+ G P+ T LSACA+S
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 151
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
G +IH + G + + ++LV+ YA+ G + ARK+FD M ERNVV+W MICG A
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
+DA+ LF M ++ PN VT + V+SAC L+ G V+ ++ GIE
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVN 270
Query: 372 IEHYGCMVDLLGRGGKLLEAKELI 395
+VD+ + + AK L
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLF 294
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMR-RHGALPGKHTFPFL 138
G++ A F ++ + N WNT+I + A+ ++ +M+ + G T +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
AC L AL + K ++ ++ K G+ LD + LV +S GD A +F+ + +R
Sbjct: 477 ASACGHL-GALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI-H 257
+S WT + A + A+ LF+ M+ +G +P+G L+AC+ G ++ G+ I +
Sbjct: 536 VSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFY 595
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHV 316
+++ GV + +V++ + G + A +L + MP E N V WN ++ G+V
Sbjct: 596 SMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNV 655
Query: 317 EDALSLFENME 327
E A E ++
Sbjct: 656 EMAAYAAEKIQ 666
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 212/396 (53%), Gaps = 7/396 (1%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRH--GALPGKHTFPFLLKAC 142
A +F S+ + + W +LI + AL ++ M+ P + AC
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
+ L AL QVH ++K GL L+ V + L+ YS G A VF + + ++ W
Sbjct: 487 AGL-EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
+M+ Y++N ++ LF M+++G P+ ++ SVL A + + L G+ +H +
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
G+ L +AL++MY K G A +F M ++++TWN MI G +HG ALSL
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
F+ M+K G + P+DVTF+ ++SAC H G ++ G+++F MK YGIEP +EHY MVDLL
Sbjct: 666 FDEMKKAGES-PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 383 GRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHV 442
GR G L EA IK MP + D I LL AS+ N E+ + E++L +EP+ +V
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784
Query: 443 SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
L N+Y EAG + +L MKE+ L K PG S +
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 7/305 (2%)
Query: 49 EQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIH-QPNTFMWNTLI 107
E+ KQ+H M+ + D G A R+F I + N +WN +I
Sbjct: 187 EEGKQIHGFMLRNSL--DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 108 RAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGL 164
+++L LY+ + + +F L ACS + +Q+H V+K GL
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ-SENSGFGRQIHCDVVKMGL 303
Query: 165 GLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEG 224
D +V L+ YS G + +A VF + + L +W MV YA+N AL LF
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 225 MVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGA 284
M + P+ TL++V+S C+ G G+ +H + + ++ + SAL+ +Y+K G
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 285 IAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLS 344
A +F M E+++V W +I GL +G ++AL +F +M+ + ++ D + ++
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 345 ACCHG 349
C G
Sbjct: 484 NACAG 488
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 175/414 (42%), Gaps = 50/414 (12%)
Query: 104 NTLIRAQRHPQTAL-SLYITMRRHGALP---GKHTFPFLLKACSSLTPALPVHKQVHAHV 159
N+ IRA L +L++ + G+ P TFP LLKACS+LT L K +H V
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTN-LSYGKTIHGSV 86
Query: 160 LKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE-------IPSRSLSLWTTMVCGYAQN 212
+ G D +A LV Y G L A VFD + +R +++W +M+ GY +
Sbjct: 87 VVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKF 146
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL--ELGERIHEFMRVKGVEVGVI 270
E + F M+ G P+ +L+ V+S + G E G++IH FM ++
Sbjct: 147 RRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSF 206
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHVEDALSLFENMEKE 329
L +AL++MY K G A ++F + ++ NVV WN MI G G E +L L+ +
Sbjct: 207 LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNN 266
Query: 330 GVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM--------------------------- 362
V + + +F G L AC GR + C +
Sbjct: 267 SVKLVS-TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 363 -KTVYG--IEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKN 416
+TV+ ++ ++E + MV A +L M K PD L ++
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 417 IGNTEVAKVVTEEILALE-PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
+G K V E+ + +L +Y++ G D + K+M+E+ +
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM 439
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 11/294 (3%)
Query: 32 RQDPPTLAVLADKCTTVEQLK---QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHA 88
+ D + + + C +E L+ QVH M+ T + G A
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN--VFVGSSLIDLYSKCGLPEMA 530
Query: 89 SRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
++F+S+ N WN++I P+ ++ L+ M G P + +L A SS
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISS- 589
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
T +L K +H + L+ G+ D+H+ N L+ Y G A +F ++ +SL W M
Sbjct: 590 TASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM 649
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK-G 264
+ GY + AL+LF+ M G P+ T S++SAC SG +E G+ I EFM+ G
Sbjct: 650 IYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYG 709
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVE 317
+E + + +V++ + G + A MP E + W ++ TH +VE
Sbjct: 710 IEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 226/426 (53%), Gaps = 37/426 (8%)
Query: 88 ASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A R+F N + N + Q + AL ++ M G P + + + +CS
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLV----RC----------------------- 177
L L K H +VL+ G ++ N L+ +C
Sbjct: 350 LRNIL-WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 178 ----YSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVA-EGFEP 232
Y +G++ A F+ +P +++ W T++ G Q EA+ +F M + EG
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
+G T+ S+ SAC G L+L + I+ ++ G+++ V LG+ LV+M+++ G A +F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
+ + R+V W I +A G+ E A+ LF++M ++G+ P+ V F+G L+AC HGGL+
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK-PDGVAFVGALTACSHGGLV 587
Query: 353 DVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
G+++F SM ++G+ P+ HYGCMVDLLGR G L EA +LI+ MP +P+ VI +LL
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
A + GN E+A E+I L P+ G +V LSN+YA AG W D+ ++R +MKE+ L+K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 473 PGWSLV 478
PG S +
Sbjct: 708 PGTSSI 713
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 169/342 (49%), Gaps = 23/342 (6%)
Query: 31 TRQDPPTLAVLADKCTTVEQLKQVHAQMVVTARFND-HXXXXXXXXXXXXXXXGDLTHAS 89
T+ P +L C T+++LK H + ND L+ A
Sbjct: 32 TKATPSSLK----NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 90 RIFSSIHQPNT-FMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
+F + T FM+N+LIR A+ L++ M G P K+TFPF L AC+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK- 146
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
+ A Q+H ++K G D V N LV Y+ G+L AR VFDE+ R++ WT+M
Sbjct: 147 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 206 VCGYAQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
+CGYA+ + +A+ LF MV E PN T+ V+SACA+ LE GE+++ F+R G
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+EV ++ SALV+MY K AI +A++LFD N+ N M G +AL +F
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 325 NMEKEGVAVPNDVTFIGVLSAC-----------CHGGLLDVG 355
M GV P+ ++ + +S+C CHG +L G
Sbjct: 327 LMMDSGVR-PDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 10/290 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI--RAQRH-PQTALSLYITM-RRHGALPGKHTFPFL 138
G+L A ++F + + N W ++I A+R + A+ L+ M R P T +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+ AC+ L L ++V+A + G+ ++ + + LV Y + A+ +FDE + +
Sbjct: 243 ISACAKLED-LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
L L M Y + + EAL +F M+ G P+ ++ S +S+C++ + G+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
++ G E + +AL++MY K A ++FD M + VVTWN ++ G +G V+
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGI 368
A FE M ++ + V++ ++S G L + +VFCSM++ G+
Sbjct: 422 AWETFETMPEKNI-----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLV--RC-YSVSGDLVDARFVFD 192
P LK C ++ K H + K GL D LV C L A+ VF+
Sbjct: 36 PSSLKNCKTIDEL----KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFE 91
Query: 193 EIPSR-SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
S + ++ +++ GYA + NEA+ LF M+ G P+ T LSACA+S
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 151
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
G +IH + G + + ++LV+ YA+ G + ARK+FD M ERNVV+W MICG A
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
+DA+ LF M ++ PN VT + V+SAC L+ G V+ ++ GIE
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVN 270
Query: 372 IEHYGCMVDLLGRGGKLLEAKELI 395
+VD+ + + AK L
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLF 294
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMR-RHGALPGKHTFPFL 138
G++ A F ++ + N WNT+I + A+ ++ +M+ + G T +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
AC L AL + K ++ ++ K G+ LD + LV +S GD A +F+ + +R
Sbjct: 477 ASACGHLG-ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI-H 257
+S WT + A + A+ LF+ M+ +G +P+G L+AC+ G ++ G+ I +
Sbjct: 536 VSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFY 595
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHV 316
+++ GV + +V++ + G + A +L + MP E N V WN ++ G+V
Sbjct: 596 SMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNV 655
Query: 317 EDALSLFENME 327
E A E ++
Sbjct: 656 EMAAYAAEKIQ 666
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 175/289 (60%), Gaps = 1/289 (0%)
Query: 190 VFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGC 249
+F ++ +SL W M+ Y +N EA+ L+ M A+GFEP+ ++ SVL AC +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
L LG++IH ++ K + ++L +AL++MYAK G + AR +F+ M R+VV+W MI
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
G DA++LF ++ G+ VP+ + F+ L+AC H GLL+ GR F M Y I
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGL-VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE 429
P++EH CMVDLLGR GK+ EA I+ M +P+ + GALL A + +T++ + ++
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 430 ILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ L P+ G +V LSN+YA+AG W++V +R MK + LKK PG S V
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 19/348 (5%)
Query: 137 FLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
FLL P + + VH+ ++ L +S + L+R Y+ D+ AR VFDEIP
Sbjct: 43 FLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE 102
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
R++ + M+ Y N E + +F M P+ T VL AC+ SG + +G +I
Sbjct: 103 RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H G+ + +G+ LV+MY K G ++ AR + D M R+VV+WN ++ G A +
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 317 EDALSLFENMEKEGVAVPNDV-TFIGVLSACCHGGLLDVG--RDVFCSMKTVYGIEPKIE 373
+DAL + M E V + +D T +L A + +V +D+F M + +
Sbjct: 223 DDALEVCREM--ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG-----KKSLV 275
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ M+ + + +EA EL M ++PD V + ++L A + + K + I
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 431 --LALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
L P N + +L +MYA+ G + + + MK + V W+
Sbjct: 336 ERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKS---RDVVSWT 379
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 8/243 (3%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
++ + +F + + + WN +I P A+ LY M G P + +L
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
AC T AL + K++H ++ + L + + N L+ Y+ G L AR VF+ + SR +
Sbjct: 318 ACGD-TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
WT M+ Y + +A+ALF + G P+ + L+AC+ +G LE G + M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 261 RVKGVEVGVILG--SALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVE 317
++ L + +V++ + G + A + M E N W ++ H +
Sbjct: 437 -TDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 318 DAL 320
L
Sbjct: 496 IGL 498
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 224/409 (54%), Gaps = 31/409 (7%)
Query: 83 GDLTHASRIFSSIHQ-PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFL 138
GD AS +F I NT W +I+ + + A L+ M PF
Sbjct: 126 GDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------------PFE 173
Query: 139 LKACSSLTPALPVH--KQVHAHVLKFGLGL---DSHVANGLVRCYSVSGDLVDARFVFDE 193
LK + + L V+ + KF + ++ V + ++ Y GD+ +AR +F
Sbjct: 174 LKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYR 233
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+ +R L +W T++ GYAQN S++A+ F M EG+EP+ T++S+LSACA+SG L++G
Sbjct: 234 VFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG 293
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
+H + +G+E+ + +AL++MYAK G + A +F+ + R+V N MI LA H
Sbjct: 294 REVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIH 353
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
G ++AL +F ME + P+++TFI VL+AC HGG L G +F MKT ++P ++
Sbjct: 354 GKGKEALEMFSTMESLDLK-PDEITFIAVLTACVHGGFLMEGLKIFSEMKT-QDVKPNVK 411
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE----- 428
H+GC++ LLGR GKL EA L+K M KP+ +LGALL A K +TE+A+ V +
Sbjct: 412 HFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETA 471
Query: 429 -EILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
I +NH S+SN+YA WQ LR M++ L+K PG S
Sbjct: 472 GSITNSYSENH--LASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 48/360 (13%)
Query: 113 PQTALSLYITMRRHGA-LPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVA 171
P AL LY +RR G PG P +L+AC+ + P + + K +H+ +KFG+ D V
Sbjct: 27 PIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVG 84
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
+ L+ Y G +V AR VFDE+P R+++ W M+ GY N + A LFE +
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVC 141
Query: 232 PNGATLASVLSACARSGCLELGERIHEFM--RVKGVEVGVILGSALVNMYAKNGAIAMAR 289
N T ++ + +E + E M +K V+ S ++ +Y N + AR
Sbjct: 142 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKA----WSVMLGVYVNNRKMEDAR 197
Query: 290 KLFDGMPERN-------------------------------VVTWNGMICGLATHGHVED 318
K F+ +PE+N +V WN +I G A +G+ +D
Sbjct: 198 KFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD 257
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
A+ F NM+ EG P+ VT +LSAC G LDVGR+V S+ GIE +
Sbjct: 258 AIDAFFNMQGEGYE-PDAVTVSSILSACAQSGRLDVGREVH-SLINHRGIELNQFVSNAL 315
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE--ASKNIGNTEVAKVVTEEILALEPD 436
+D+ + G L A + + + + V +++ A G + T E L L+PD
Sbjct: 316 IDMYAKCGDLENATSVFESISVR-SVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPD 374
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 212/399 (53%), Gaps = 6/399 (1%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
D A +F + N W +I A ++ + + L+ M+R P + T +L
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
AC L + K++H + G D + + Y G++ +R +F+ R +
Sbjct: 260 ACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVV 319
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
+W++M+ GYA+ +E + L M EG E N TL +++SAC S L +H +
Sbjct: 320 MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQI 379
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
G ++LG+AL++MYAK G+++ AR++F + E+++V+W+ MI HGH +AL
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEAL 439
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+F+ M K G V +D+ F+ +LSAC H GL++ + +F + Y + +EHY C ++
Sbjct: 440 EIFKGMIKGGHEV-DDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYIN 497
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA-KVVTEEILALEPDNHG 439
LLGR GK+ +A E+ MP KP I +LL A + G +VA K++ E++ EPDN
Sbjct: 498 LLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPA 557
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V LS ++ E+G + +R+ M+ +L K G+S +
Sbjct: 558 NYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 151/335 (45%), Gaps = 38/335 (11%)
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
P ++KAC+ + Q+H LK G D+ V+N L+ Y+ R VFDE+
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEM 108
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSG-CLELG 253
R + +++ Q+ EA+ L + M GF P +AS+L+ C R G ++
Sbjct: 109 LHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVA 168
Query: 254 ERIHEFMRV-KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
H + V + ++ V+L +ALV+MY K A A +FD M +N V+W MI G
Sbjct: 169 RMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVA 228
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
+ + E + LF M++E + PN VT + VL AC L+ G + +K ++G +
Sbjct: 229 NQNYEMGVDLFRAMQRENLR-PNRVTLLSVLPACVE---LNYGSSL---VKEIHGFSFR- 280
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILA 432
+GC D + A + GN +++V+ E
Sbjct: 281 --HGC-----------------------HADERLTAAFMTMYCRCGNVSLSRVLFE---T 312
Query: 433 LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
+ + + S+ + YAE G+ +V+ L M++E
Sbjct: 313 SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE 347
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 224/431 (51%), Gaps = 39/431 (9%)
Query: 83 GDLTHASRIFSSIHQPN-TFMWNTLI--RAQR-HPQTALSLYITMRRHGALPGKHTFPFL 138
GD+ A +F + N T WNTLI AQ + + AL + ++M +G +H+F +
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAV 266
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLV----RC----------------- 177
L SSL +L + K+VHA VLK G + V++G+V +C
Sbjct: 267 LNVLSSL-KSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 178 ----------YSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVA 227
YS G +V+A+ +FD + ++L +WT M GY + L L +A
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA 385
Query: 228 -EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
E P+ + SVL AC+ +E G+ IH G+ + L +A V+MY+K G +
Sbjct: 386 NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVE 445
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
A ++FD ER+ V +N MI G A HGH + FE+M EG P+++TF+ +LSAC
Sbjct: 446 YAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM-TEGGFKPDEITFMALLSAC 504
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW-KPDVV 405
H GL+ G F SM Y I P+ HY CM+DL G+ +L +A EL++G+ + D V
Sbjct: 505 RHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAV 564
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
ILGA L A NTE+ K V E++L +E N ++ ++N YA +G W ++ R+R M+
Sbjct: 565 ILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMR 624
Query: 466 EERLKKVPGWS 476
+ L+ G S
Sbjct: 625 GKELEIFSGCS 635
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL-WTTMVCGYAQNFCSNEALALFEG 224
+DS N ++ Y GD+ A VF P + ++ W T++ GYAQN EAL +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 225 MVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK--- 281
M G + + + +VL+ + L++G+ +H + G + S +V++Y K
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 282 ----------------------------NGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
G + A++LFD + E+N+V W M G
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKI 372
+ L L P+ + + VL AC ++ G+++ S++T ++ K+
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
VD+ + G +E E I ++ D V+ A++
Sbjct: 431 --VTAFVDMYSKCGN-VEYAERIFDSSFERDTVMYNAMI 466
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 249 CLELGERIHEFMRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMI 307
CL+ G +H +K G + + + LVN+Y+K+G + AR +FD M ERNV +WN +I
Sbjct: 3 CLKDG-FLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVI 61
Query: 308 CGLATHGHVEDALSLFEN 325
+V++A LFE+
Sbjct: 62 AAYVKFNNVKEARELFES 79
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 229/433 (52%), Gaps = 43/433 (9%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALP-GKHTFPFLL 139
++TH ++F + Q + WN LI + + A+ ++ M + L + T L
Sbjct: 98 EITH--KVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTL 155
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLV------------------------ 175
ACS+L L + ++++ V+ + + N LV
Sbjct: 156 SACSAL-KNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 176 RC-------YSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAE 228
+C Y +G + +AR +F+ P + + LWT M+ GY Q +EAL LF M
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
G P+ L S+L+ CA++G LE G+ IH ++ V V ++G+ALV+MYAK G I A
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETA 333
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
++F + ER+ +W +I GLA +G AL L+ ME GV + + +TF+ VL+AC H
Sbjct: 334 LEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRL-DAITFVAVLTACNH 392
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPD---VV 405
GG + GR +F SM + ++PK EH C++DLL R G L EA+ELI M + D V
Sbjct: 393 GGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVP 452
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
+ +LL A++N GN ++A+ V E++ +E + H L+++YA A W+DV +R+ MK
Sbjct: 453 VYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMK 512
Query: 466 EERLKKVPGWSLV 478
+ ++K PG S +
Sbjct: 513 DLGIRKFPGCSSI 525
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 146/282 (51%), Gaps = 12/282 (4%)
Query: 93 SSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLLKACSSLTPAL 149
S + P+ M+N ++++ ++ L+L+ +R G P T P +LK+ L +
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGY 209
K VH + +K GL DS+V+N L+ Y+ G + VFDE+P R + W ++ Y
Sbjct: 64 EGEK-VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 210 AQNFCSNEALALFEGMVAE-GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
N +A+ +F+ M E + + T+ S LSAC+ LE+GERI+ F+ V E+
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEFEMS 181
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
V +G+ALV+M+ K G + AR +FD M ++NV W M+ G + G +++A LFE
Sbjct: 182 VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER--- 238
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
V + V + +++ D ++F M+T GI P
Sbjct: 239 --SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA-GIRP 277
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
SL ++ M+ A + LALF + +G P+ TL VL + R + GE++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G+E + ++L+ MYA G I + K+FD MP+R+VV+WNG+I +G E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
DA+ +F+ M +E ++ T + LSAC L++G ++ + T + + +I +
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--A 187
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
+VD+ + G L +A+ + M K +V +++ + G + A+V+ E P
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARVLFER----SPVK 242
Query: 438 HGV-HVSLSNMYAEAGEWQDVLRLRKTMK 465
V ++ N Y + + + L L + M+
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 238/484 (49%), Gaps = 42/484 (8%)
Query: 34 DPPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
D T L + + ++KQ+H ++V+ + G+ A ++F+
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLS-LGNYLWNSLVKFYMELGNFGVAEKVFA 190
Query: 94 SIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
+ P+ +N +I Q AL LY M G P ++T LL C L+ +
Sbjct: 191 RMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD-IR 249
Query: 151 VHKQVHAHVLKFGLGLDSHV--ANGLVRCYSVS--------------------------- 181
+ K VH + + G S++ +N L+ Y
Sbjct: 250 LGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVG 309
Query: 182 ----GDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALA--LFEGMVAEGFEPNGA 235
GD+ A+ VFD++P R L W +++ GY++ C + +E + E +P+
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 236 TLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM 295
T+ S++S A +G L G +H + ++ L SAL++MY K G I A +F
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 296 PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVG 355
E++V W MI GLA HG+ + AL LF M++EGV PN+VT + VL+AC H GL++ G
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT-PNNVTLLAVLTACSHSGLVEEG 488
Query: 356 RDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI-KGMPWKPDVVILGALLEAS 414
VF MK +G +P+ EHYG +VDLL R G++ EAK+++ K MP +P + G++L A
Sbjct: 489 LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC 548
Query: 415 KNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPG 474
+ + E A++ E+L LEP+ G +V LSN+YA G W + R+ M+ +KK G
Sbjct: 549 RGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAG 608
Query: 475 WSLV 478
+S V
Sbjct: 609 YSSV 612
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 207/443 (46%), Gaps = 33/443 (7%)
Query: 40 VLADKCTTVEQLKQVHAQMVVTARFN---DHXXXXXXXXXXXXXXXGDLTHASRIFSSIH 96
VL + C + Q KQV AQ++ RFN D +L A +F +
Sbjct: 39 VLLENCNSRNQFKQVLAQIM---RFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFT 95
Query: 97 -QPNTFMWNTLIRAQRHPQT-ALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
PN F++NT+I A + LY +M RH P + TF +L+KA S L+ KQ
Sbjct: 96 PNPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV----KQ 151
Query: 155 VHAHVLKFG-LGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
+H H++ G L L +++ N LV+ Y G+ A VF +P +S + M+ GYA+
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG--VEVGVIL 271
S EAL L+ MV++G EP+ T+ S+L C + LG+ +H ++ +G +IL
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+AL++MY K +A++ FD M ++++ +WN M+ G G +E A ++F+ M K +
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDL 331
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
N + F C + R++F M V ++P ++ G+L
Sbjct: 332 VSWNSLLFGYSKKGCDQRTV----RELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 392 K---ELIKGMPWKPDVVILGALLEASKNIGNTE----VAKVVTEEILALEPDNHGVHVSL 444
+ L+ + K D + AL++ G E V K TE+ +AL S+
Sbjct: 388 RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVAL-------WTSM 440
Query: 445 SNMYAEAGEWQDVLRLRKTMKEE 467
A G Q L+L M+EE
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEE 463
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 209/404 (51%), Gaps = 10/404 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR--------AQRHPQTALSLYITMRRHGALPGKHT 134
G L A ++FS + N +N +I A L++ M+R G P T
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
F +LKACS+ L +Q+HA + K D + + L+ Y++ G D F
Sbjct: 361 FSVVLKACSA-AKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 419
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
+ ++ WT+M+ + QN A LF + + P T++ ++SACA L GE
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
+I + G++ + ++ ++MYAK+G + +A ++F + +V T++ MI LA HG
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH 374
+AL++FE+M+ G+ PN F+GVL ACCHGGL+ G F MK Y I P +H
Sbjct: 540 SANEALNIFESMKTHGIK-PNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKH 598
Query: 375 YGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
+ C+VDLLGR G+L +A+ LI ++ V ALL + + ++ + K V E ++ LE
Sbjct: 599 FTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELE 658
Query: 435 PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
P+ G +V L N+Y ++G +R+ M++ +KK P S +
Sbjct: 659 PEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 13/286 (4%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLK 140
+L A ++F + + N +N+LI + A+ L++ R K T+ L
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
C L + + +H V+ GL + N L+ YS G L A +FD R
Sbjct: 157 FCGERCD-LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA---RSGCLELGERIH 257
W +++ GY + + E L L M +G L SVL AC G +E G IH
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G+E +++ +AL++MYAKNG++ A KLF MP +NVVT+N MI G +
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 318 D-----ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
D A LF +M++ G+ P+ TF VL AC L+ GR +
Sbjct: 336 DEASSEAFKLFMDMQRRGLE-PSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
K H H++K L ++ N L+ Y +L AR +FD +P R++ + +++ GY Q
Sbjct: 67 KLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQM 126
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
+A+ LF + + T A L C L+LGE +H + V G+ V L
Sbjct: 127 GFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI 186
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
+ L++MY+K G + A LFD ER+ V+WN +I G G E+ L+L M ++G+
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL- 245
Query: 333 VPNDVTFI--GVLSACC---HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
N T+ VL ACC + G ++ G + C + G+E I ++D+ + G
Sbjct: 246 --NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL-GMEFDIVVRTALLDMYAKNGS 302
Query: 388 LLEAKELIKGMPWKPDVVILGALL 411
L EA +L MP K +VV A++
Sbjct: 303 LKEAIKLFSLMPSK-NVVTYNAMI 325
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACAR 246
A+ F+ I SL T G F S+ + +EG++ + A+
Sbjct: 7 AKTFFNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKI-------LFQTAAK 59
Query: 247 SGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
SG + LG+ H M + + L + L+NMY K + AR+LFD MPERN++++N +
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
I G G E A+ LF + + + + T+ G L C LD+G ++ + V
Sbjct: 120 ISGYTQMGFYEQAMELFLEAREANLKL-DKFTYAGALGFCGERCDLDLG-ELLHGLVVVN 177
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTE 421
G+ ++ ++D+ + GKL +A L + D V +L+ +G E
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER-DQVSWNSLISGYVRVGAAE 231
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 218/407 (53%), Gaps = 16/407 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A F S+ + + WN +I A T+ SL+ M G P TF LL
Sbjct: 162 GKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 221
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+A S + L + ++H +K G G S + LV Y G L +A + + R L
Sbjct: 222 RA-SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDL 280
Query: 200 SLWTTMVCGYAQ-NFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
T ++ G++Q N C+++A +F+ M+ + + ++S+L C + +G +IH
Sbjct: 281 LSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHG 340
Query: 259 F-MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
F ++ + V LG++L++MYAK+G I A F+ M E++V +W +I G HG+ E
Sbjct: 341 FALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFE 400
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
A+ L+ ME E + PNDVTF+ +LSAC H G ++G ++ +M +GIE + EH C
Sbjct: 401 KAIDLYNRMEHERIK-PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSC 459
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVIL-----GALLEASKNIGNTEVAKVVTEEILA 432
++D+L R G L EA LI+ K +V L GA L+A + GN +++KV ++L+
Sbjct: 460 IIDMLARSGYLEEAYALIRS---KEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLS 516
Query: 433 LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE-RLKKVPGWSLV 478
+EP +++L+++YA G W + L RK MKE K PG+SLV
Sbjct: 517 MEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 159/346 (45%), Gaps = 9/346 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
GD+ HA ++F I + + W +I R HP AL L+ M R + T+ +
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPD-ALLLFKEMHREDVKANQFTYGSV 119
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
LK+C L L Q+H V K + V + L+ Y+ G + +AR FD + R
Sbjct: 120 LKSCKDL-GCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
L W M+ GY N C++ + +LF+ M+ EG +P+ T S+L A CLE+ +H
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH-VE 317
G L +LVN Y K G++A A KL +G +R++++ +I G + +
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS 298
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
DA +F++M + + ++V +L C + +GR + I +
Sbjct: 299 DAFDIFKDMIRMKTKM-DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNS 357
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
++D+ + G++ +A + M K DV +L+ GN E A
Sbjct: 358 LIDMYAKSGEIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHGNFEKA 402
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 172/379 (45%), Gaps = 51/379 (13%)
Query: 139 LKACSSLTPALPVHKQ---VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
LK CS V KQ +H + + G + + + L+ Y GD+ AR +FD I
Sbjct: 19 LKLCSYQN----VKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
R + WT M+ +++ +AL LF+ M E + N T SVL +C GCL+ G +
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
IH + +I+ SAL+++YA+ G + AR FD M ER++V+WN MI G +
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYG-----IE 369
+ + SLF+ M EG P+ TF +L A L++ ++ ++K +G I
Sbjct: 195 ADTSFSLFQLMLTEG-KKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIR 253
Query: 370 PKIEHY---GCMVDL--LGRGGK---LLEAKELIKG--------------------MPWK 401
+ Y G + + L G K LL LI G M K
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTK 313
Query: 402 PDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSN----MYAEAGEWQDV 457
D V++ ++L+ I + + + + AL+ V+L N MYA++GE +D
Sbjct: 314 MDEVVVSSMLKICTTIASVTIGRQI--HGFALKSSQIRFDVALGNSLIDMYAKSGEIEDA 371
Query: 458 LRLRKTMKEERLKKVPGWS 476
+ + MKE K V W+
Sbjct: 372 VLAFEEMKE---KDVRSWT 387
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 183/308 (59%), Gaps = 2/308 (0%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N ++ Y SG + +A +FD++P R L WT M+ G+ + EAL F M G +
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
P+ + + L+AC G L G +H ++ + + V + ++L+++Y + G + AR++
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
F M +R VV+WN +I G A +G+ ++L F M+++G P+ VTF G L+AC H GL
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK-PDAVTFTGALTACSHVGL 322
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
++ G F MK Y I P+IEHYGC+VDL R G+L +A +L++ MP KP+ V++G+LL
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 412 EASKNIGNTEV-AKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
A N GN V A+ + + + L +H +V LSNMYA G+W+ ++R+ MK LK
Sbjct: 383 AACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 442
Query: 471 KVPGWSLV 478
K PG+S +
Sbjct: 443 KQPGFSSI 450
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 6/238 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + +A+++F + + + W +I + + + AL + M+ G P L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC++L AL VH +VL + V+N L+ Y G + AR VF + R++
Sbjct: 214 NACTNL-GALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +++ G+A N ++E+L F M +GF+P+ T L+AC+ G +E G R +
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 260 MRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGH 315
M+ + + LV++Y++ G + A KL MP + N V ++ + HG+
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 76/345 (22%)
Query: 192 DEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA--RSGC 249
++ S + WT+ + +N EA F M G EPN T ++LS C SG
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 250 LELGERIHEFMRVKGVEVG-VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWN---- 304
LG+ +H + G++ V++G+A++ MY+K G AR +FD M ++N VTWN
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 305 ---------------------------GMICGLATHGHVEDALSLFENMEKEGVAVPNDV 337
MI G G+ E+AL F M+ GV P+ V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK-PDYV 207
Query: 338 TFIGVLSACCHGGLLDVGR----------------------DVFC-------SMKTVYGI 368
I L+AC + G L G D++C + + Y +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 369 EPK-IEHYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALLEASKNIGNTE--- 421
E + + + ++ G E+ + M +KPD V L A ++G E
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 422 --VAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
+ + ++ +++G L ++Y+ AG +D L+L ++M
Sbjct: 328 RYFQIMKCDYRISPRIEHYGC---LVDLYSRAGRLEDALKLVQSM 369
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 212/400 (53%), Gaps = 9/400 (2%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITM--RRHGALPGKHTFPFLL 139
+ +A R+F + N W+ +I + A ++ M + A+ +L
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLIL 315
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C+ L + VH + +K G LD V N ++ Y+ G L DA F EI + +
Sbjct: 316 MGCARFGD-LSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
+ +++ G N E+ LF M G P+ TL VL+AC+ L G H +
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGY 434
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
V G V + +AL++MY K G + +A+++FD M +R++V+WN M+ G HG ++A
Sbjct: 435 CVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEA 494
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCM 378
LSLF +M++ GV P++VT + +LSAC H GL+D G+ +F SM + + + P+I+HY CM
Sbjct: 495 LSLFNSMQETGVN-PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM 553
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
DLL R G L EA + + MP++PD+ +LG LL A N E+ V++++ +L
Sbjct: 554 TDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE 613
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ V LSN Y+ A W+D R+R K+ L K PG+S V
Sbjct: 614 SL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 167/332 (50%), Gaps = 12/332 (3%)
Query: 88 ASRIFSSIHQP--NTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
A +F I P N W+ +IRA + AL LY M G P K+T+PF+LKAC
Sbjct: 54 ARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKAC 113
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
+ L A+ K +H+HV D +V LV Y+ G+L A VFDE+P R + W
Sbjct: 114 AGLR-AIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAW 172
Query: 203 TTMVCGYAQNFCSNEALALFEGMV-AEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
M+ G++ + C + + LF M +G PN +T+ + A R+G L G+ +H +
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
G +++ + ++++YAK+ I AR++FD ++N VTW+ MI G + +++A
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGE 292
Query: 322 LFENM-EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMV 379
+F M + VA+ V +L C G L GR V C ++K + ++ +++ ++
Sbjct: 293 VFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN--TII 350
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+ G L +A + K DV+ +L+
Sbjct: 351 SFYAKYGSLCDAFRQFSEIGLK-DVISYNSLI 381
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 6/232 (2%)
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSH-VANGLVRCYSVSGDLVDARFVFDE 193
F LL+ C + L + + +H H+LK L L S V L R Y+ ++ AR VFDE
Sbjct: 2 FLSLLETCIR-SRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 194 IPSRSLS--LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
IP ++ W M+ YA N + +AL L+ M+ G P T VL ACA ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
G+ IH + + + +ALV+ YAK G + MA K+FD MP+R++V WN MI G +
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV--FCS 361
H + D + LF +M + PN T +G+ A G L G+ V +C+
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 154/341 (45%), Gaps = 22/341 (6%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA-QRHP--QTALSLYITMRR-HGALPGKHT---- 134
G+L A ++F + + + WN +I H + L++ MRR G P T
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
FP L +A AL K VH + + G D V G++ Y+ S ++ AR VFD
Sbjct: 212 FPALGRA-----GALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD 266
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP--NGATLASVLSACARSGCLEL 252
++ W+ M+ GY +N EA +F M+ + +L CAR G L
Sbjct: 267 FKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSG 326
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
G +H + G + + + + +++ YAK G++ A + F + ++V+++N +I G
Sbjct: 327 GRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVV 386
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV--FCSMKTVYGIEP 370
+ E++ LF M G+ P+ T +GVL+AC H L G +C V+G
Sbjct: 387 NCRPEESFRLFHEMRTSGIR-PDITTLLGVLTACSHLAALGHGSSCHGYC---VVHGYAV 442
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
++D+ + GKL AK + M K D+V +L
Sbjct: 443 NTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTML 482
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 238/514 (46%), Gaps = 74/514 (14%)
Query: 34 DPPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
D L C L+ VHAQ++ + ++ IF
Sbjct: 28 DESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPD---YSLSIFR 84
Query: 94 SIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
+ + N F+ N LIR ++++ +I M R G P + TFPF+LK+ S L
Sbjct: 85 NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRW- 143
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE----------------- 193
+ + +HA LK + DS V LV Y+ +G L A VF+E
Sbjct: 144 LGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 194 ------------------IPSRSLSLWTTMVCGYAQNFCSNEALALFE------------ 223
+P R+ W+T++ GY + N A LFE
Sbjct: 204 NGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTT 263
Query: 224 -------------------GMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ +G +PN T+A+VLSAC++SG L G RIH ++ G
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+++ +G+ALV+MYAK G + A +F M +++++W MI G A HG A+ F
Sbjct: 324 IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M G P++V F+ VL+AC + +D+G + F SM+ Y IEP ++HY +VDLLGR
Sbjct: 384 QMMYSG-EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSL 444
GKL EA EL++ MP PD+ AL A K A+ V++ +L L+P+ G ++ L
Sbjct: 443 AGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFL 502
Query: 445 SNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+A G QDV + R ++++ ++ GWS +
Sbjct: 503 DKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYI 536
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 113/294 (38%), Gaps = 72/294 (24%)
Query: 128 ALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDA 187
A P + F L+ AC T +L + VHA +L+ G+ L S VA LV C S+ +
Sbjct: 25 ASPDESHFISLIHACKD-TASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYS 79
Query: 188 RFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARS 247
+F R+ + ++ G +N ++ F M+ G +P+ T VL + ++
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 248 GCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA--------------------- 286
G LG +H V+ + +LV+MYAK G +
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 287 --------------MARKLFDGMPERN-------------------------------VV 301
MA LF MPERN VV
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVG 355
+W +I G + G E A+S + M ++G+ PN+ T VLSAC G L G
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLK-PNEYTIAAVLSACSKSGALGSG 312
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 213/388 (54%), Gaps = 11/388 (2%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLK 140
D A ++F S+ + + WNT+I + + +A+S+Y M G P + TF LL
Sbjct: 338 DFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL- 396
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
+ + L V + V A ++KFGL ++N L+ YS +G + A +F+ ++L
Sbjct: 397 ---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLI 453
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFE--PNGATLASVLSACARSGCLELGERIHE 258
W ++ G+ N E L F ++ P+ TL+++LS C + L LG + H
Sbjct: 454 SWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
++ G ++G+AL+NMY++ G I + ++F+ M E++VV+WN +I + HG E+
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
A++ ++ M+ EG +P+ TF VLSAC H GL++ G ++F SM +G+ ++H+ C+
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 379 VDLLGRGGKLLEAKELIK--GMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
VDLLGR G L EA+ L+K V + AL A G+ ++ K+V + ++ E D
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKD 693
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
+ V+V LSN+YA AG W++ R+ +
Sbjct: 694 DPSVYVQLSNIYAGAGMWKEAEETRRAI 721
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 191/442 (43%), Gaps = 67/442 (15%)
Query: 83 GDLTHASRIFSSI-HQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
GD+ +A +F + + + +WN +I + + +T++ L+ M + G K F +
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE--IPS 196
L C +L KQVH+ V+K G + S V N L+ Y +VDA VF+E +
Sbjct: 197 LSMCD--YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
R + ++ G A F +E+L +F M+ P T SV+ +C+ C +G ++
Sbjct: 255 RDQVTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQV 310
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H G E ++ +A + MY+ A K+F+ + E+++VTWN MI
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
+ A+S+++ M GV P++ TF +L+ +L++ + C +K +G+ KIE
Sbjct: 371 KSAMSVYKRMHIIGVK-PDEFTFGSLLATSLDLDVLEMVQA--CIIK--FGLSSKIEISN 425
Query: 377 CMVDLLGRGGKLLEA---------KELI-----------KGMPWK--------------- 401
++ + G++ +A K LI G P++
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRI 485
Query: 402 -PDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG------VHVSLSNMYAEAGEW 454
PD L LL + + + +L HG + +L NMY++ G
Sbjct: 486 LPDAYTLSTLLSICVSTSSLMLGSQTHAYVL-----RHGQFKETLIGNALINMYSQCGTI 540
Query: 455 QDVLRLRKTMKEERLKKVPGWS 476
Q+ L + M E K V W+
Sbjct: 541 QNSLEVFNQMSE---KDVVSWN 559
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 10/295 (3%)
Query: 130 PGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF 189
P TF ++ +CS + QVH +K G + V+N + YS D A
Sbjct: 289 PTDLTFVSVMGSCS----CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHK 344
Query: 190 VFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGC 249
VF+ + + L W TM+ Y Q A+++++ M G +P+ T S+L A S
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLD 401
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
L++ E + + G+ + + +AL++ Y+KNG I A LF+ +N+++WN +I G
Sbjct: 402 LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 310 LATHGHVEDALSLFEN-MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGI 368
+G + L F +E E +P+ T +LS C L +G + +G
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQ 520
Query: 369 EPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
+ ++++ + G + + E+ M K DVV +L+ A G E A
Sbjct: 521 FKETLIGNALINMYSQCGTIQNSLEVFNQMSEK-DVVSWNSLISAYSRHGEGENA 574
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 273 SALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+ L++ K G I A ++FD MPER +V WN MI G G+ E ++ LF M K GV
Sbjct: 127 TTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGV 186
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDV 358
+ F +LS C +G LD G+ V
Sbjct: 187 R-HDKFGFATILSMCDYGS-LDFGKQV 211
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 46/402 (11%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
GD+ A +F + +T WNT+I H + A +L+ M P +
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNR------- 341
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
D+H N +V Y+ G++ AR F++ P +
Sbjct: 342 ---------------------------DAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +++ Y +N EA+ LF M EG +P+ TL S+LSA L LG ++H+
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVED 318
+ VK V V + +AL+ MY++ G I +R++FD M +R V+TWN MI G A HG+ +
Sbjct: 435 V-VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASE 493
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
AL+LF +M+ G+ P+ +TF+ VL+AC H GL+D + F SM +VY IEP++EHY +
Sbjct: 494 ALNLFGSMKSNGI-YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
V++ G+ EA +I MP++PD + GALL+A + N +A V E + LEP++
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESS 612
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVTT 480
+V L NMYA+ G W + ++R M+ +R+KK G S V +
Sbjct: 613 TPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVDS 654
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N +++ Y GD+V AR +FD++ R W TM+ GY +A ALF M
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------ 338
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
PN H + + +V+ YA G + +AR
Sbjct: 339 PN--------------------RDAHSW-------------NMMVSGYASVGNVELARHY 365
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
F+ PE++ V+WN +I + ++A+ LF M EG P+ T +LSA GL
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG-EKPDPHTLTSLLSAST--GL 422
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+++ + V + P + + ++ + R G+++E++ + M K +V+ A++
Sbjct: 423 VNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 412 EASKNIGNTEVA 423
GN A
Sbjct: 483 GGYAFHGNASEA 494
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 35/277 (12%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N ++R SG + +AR +F+++ +R+ W TM+ GY + N+A LF+ M
Sbjct: 48 NQMIR----SGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV- 102
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
T+ S +C LE ++ + M + + +++ YAKN I A L
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDS----FSWNTMISGYAKNRRIGEALLL 158
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA---------VPNDVTFIGV 342
F+ MPERN V+W+ MI G +G V+ A+ LF M + + + N+
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAA 218
Query: 343 LSACCHGGLLDVGRDVFCSMKTV---YGIEPKIEHYGCMVDLL------GRGGKLLEAKE 393
+G L+ D+ + T+ YG ++E C+ D + GG+ E
Sbjct: 219 WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER-- 276
Query: 394 LIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ +VV ++++A +G+ A+++ +++
Sbjct: 277 ------FCKNVVSWNSMIKAYLKVGDVVSARLLFDQM 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 172/455 (37%), Gaps = 101/455 (22%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A IF + NT WNT+I +R A L+ M + + T+ ++
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV----TWNTMI 109
Query: 140 KACSS------LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
S L A + ++ + DS N ++ Y+ + + +A +F++
Sbjct: 110 SGYVSCGGIRFLEEARKLFDEMPSR--------DSFSWNTMISGYAKNRRIGEALLLFEK 161
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+P R+ W+ M+ G+ QN + A+ LF M + P CA L
Sbjct: 162 MPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----------LCALVAGLIKN 211
Query: 254 ERIHEFMRVKGVEVGVILG--------SALVNMYAKNGAIAMARKLFDGMPE-------- 297
ER+ E V G ++ G + L+ Y + G + AR LFD +P+
Sbjct: 212 ERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGG 271
Query: 298 -------RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV------------- 337
+NVV+WN MI G V A LF+ M+ N +
Sbjct: 272 EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 338 -------------TFIGVLSACCHGGLLDVGRDVF--------CSMKTVYGIEPKIEHYG 376
++ ++S G +++ R F S ++ K + Y
Sbjct: 332 FALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
VDL R I+G KPD L +LL AS + N + + + ++
Sbjct: 392 EAVDLFIRMN--------IEGE--KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP 441
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKK 471
+ VH +L MY+ GE ++ R+ E +LK+
Sbjct: 442 DVPVHNALITMYSRCGE---IMESRRIFDEMKLKR 473
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Query: 276 VNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPN 335
+N ++G IA AR +F+ + RN VTWN MI G + A LF+ M K V N
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 336 DVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
T I +C L+ R +F M + + M+ + ++ EA L
Sbjct: 107 --TMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-----WNTMISGYAKNRRIGEALLLF 159
Query: 396 KGMP 399
+ MP
Sbjct: 160 EKMP 163
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 230/454 (50%), Gaps = 13/454 (2%)
Query: 31 TRQDPPTLAVLA---DKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTH 87
TR D T A LA + + L+ +H +V+ D G +
Sbjct: 102 TRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKA--GLIVE 159
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
AS++F SI P+ +WN +I ++L+ M+ G P +T L
Sbjct: 160 ASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGL-- 217
Query: 145 LTPALP-VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
+ P+L V VHA LK L S+V LV YS + A VF+ I L +
Sbjct: 218 IDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACS 277
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
+++ GY++ EAL LF + G +P+ +A VL +CA G+ +H ++
Sbjct: 278 SLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL 337
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G+E+ + + SAL++MY+K G + A LF G+PE+N+V++N +I GL HG A F
Sbjct: 338 GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKF 397
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
+ + G+ +P+++TF +L CCH GLL+ G+++F MK+ +GIEP+ EHY MV L+G
Sbjct: 398 TEILEMGL-IPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMG 456
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVH-V 442
GKL EA E + + D ILGALL + NT +A+VV E I + V+ V
Sbjct: 457 MAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKV 516
Query: 443 SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
LSN+YA G W +V RLR + E K+PG S
Sbjct: 517 MLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 7/331 (2%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLK 140
DL A ++F + + F+WN++IRA T LSL+ + R P T+ L +
Sbjct: 55 DLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLAR 114
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
S + + +H + GLG D + +V+ YS +G +V+A +F IP L+
Sbjct: 115 GFSESFDTKGL-RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLA 173
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
LW M+ GY ++ + LF M G +PN T+ ++ S L + +H F
Sbjct: 174 LWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFC 233
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
++ +G ALVNMY++ IA A +F+ + E ++V + +I G + G+ ++AL
Sbjct: 234 LKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEAL 293
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
LF + G P+ V VL +C G++V S G+E I+ ++D
Sbjct: 294 HLFAELRMSG-KKPDCVLVAIVLGSCAELSDSVSGKEVH-SYVIRLGLELDIKVCSALID 351
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+ + G L A L G+P K ++V +L+
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEK-NIVSFNSLI 381
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 152/354 (42%), Gaps = 41/354 (11%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
+++H+ V K L D + A L R Y+++ DL+ AR +FD P RS+ LW +++ YA+
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
L+LF ++ P+ T A + + S + IH V G+ I G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
SA+V Y+K G I A KLF +P+ ++ WN MI G G + ++LF M+ G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG-H 203
Query: 333 VPNDVTFIGVLS---------------ACCHGGLLDVGRDVFCSMKTVYG---------- 367
PN T + + S A C LD V C++ +Y
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 368 -----IEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW---KPDVV----ILGALLEASK 415
EP + ++ R G EA L + KPD V +LG+ E S
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 416 NIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
++ EV V L LE D V +L +MY++ G + + L + E+ +
Sbjct: 324 SVSGKEVHSYVIR--LGLELDIK-VCSALIDMYSKCGLLKCAMSLFAGIPEKNI 374
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 211/431 (48%), Gaps = 35/431 (8%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGAL-PGKHTFPFLL 139
++ A ++F + + + WN++I + +Y M P T +
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 140 KAC---SSLTPALPVHKQVHAHVLKFGLGL---------------------------DSH 169
+AC S L L VHK++ + ++ L L DS
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 170 VANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG 229
++ Y G + +A +F E+ S LS W M+ G QN E + F M+ G
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMAR 289
PN TL+S+L + S L+ G+ IH F G + + + +++++ YAK G + A+
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
++FD +R+++ W +I A HG + A SLF+ M+ G P+DVT VLSA H
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTK-PDDVTLTAVLSAFAHS 480
Query: 350 GLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGA 409
G D+ + +F SM T Y IEP +EHY CMV +L R GKL +A E I MP P + GA
Sbjct: 481 GDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGA 540
Query: 410 LLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
LL + +G+ E+A+ + + +EP+N G + ++N+Y +AG W++ +R MK L
Sbjct: 541 LLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGL 600
Query: 470 KKVPGWSLVTT 480
KK+PG S + T
Sbjct: 601 KKIPGTSWIET 611
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 16/275 (5%)
Query: 149 LPVHK-QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVC 207
LP+H Q+HA ++ F + D+ +A+ L+ Y+ A VFDEI R+ + ++
Sbjct: 37 LPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLI 96
Query: 208 GYAQNFCSNEALALFEGMV------AEGFEPNGATLASVLSACARSGCLE-----LGERI 256
Y +A +LF + ++ P+ +++ VL A SGC + L ++
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKAL--SGCDDFWLGSLARQV 154
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H F+ G + V +G+ ++ Y K I ARK+FD M ER+VV+WN MI G + G
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
ED +++ M PN VT I V AC L G +V M + I+ +
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCN 273
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
++ + G L A+ L M K D V GA++
Sbjct: 274 AVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAII 307
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 211/393 (53%), Gaps = 14/393 (3%)
Query: 83 GDLTHASRIFSSIHQ------PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKH 133
G L +A+ +F HQ + +WN+++ + AL L + + + +
Sbjct: 287 GSLIYAADVF---HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSY 343
Query: 134 TFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
T LK C + L + QVH+ V+ G LD V + LV ++ G++ DA +F
Sbjct: 344 TLSGALKICINYVN-LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+P++ + ++ ++ G ++ ++ A LF ++ G + + ++++L C+ L G
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
++IH KG E + +ALV+MY K G I LFDGM ER+VV+W G+I G +
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
G VE+A F M G+ PN VTF+G+LSAC H GLL+ R +MK+ YG+EP +E
Sbjct: 523 GRVEEAFRYFHKMINIGIE-PNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLE 581
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL 433
HY C+VDLLG+ G EA ELI MP +PD I +LL A N + V+ E++L
Sbjct: 582 HYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKG 641
Query: 434 EPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
PD+ V+ SLSN YA G W + ++R+ K+
Sbjct: 642 FPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 174/393 (44%), Gaps = 14/393 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA--QRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
G + A +F + QPN WN LI + AL + M+R G + P LK
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE---IPSR 197
AC S L + KQ+H V+K GL + L+ YS G L+ A VF + +
Sbjct: 247 AC-SFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
S+++W +M+ G+ N + AL L + + TL+ L C L LG ++H
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ V G E+ I+GS LV+++A G I A KLF +P ++++ ++G+I G G
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV--FCSMKTVYGIEPKIEHY 375
A LF + K G+ + +L C L G+ + C +K Y EP
Sbjct: 426 LAFYLFRELIKLGLD-ADQFIVSNILKVCSSLASLGWGKQIHGLC-IKKGYESEPVTAT- 482
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI-LALE 434
+VD+ + G++ L GM + V G ++ +N E + + I + +E
Sbjct: 483 -ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 435 PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
P N + L + +G ++ +TMK E
Sbjct: 542 P-NKVTFLGLLSACRHSGLLEEARSTLETMKSE 573
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 36/289 (12%)
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L+ C + A + + AHV+K G+ + +AN ++ Y L DA VFDE+ R+
Sbjct: 12 LRHCGKV-QAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERN 70
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMV-AEGFEPNGATLASVLSACARSGCLELGERIH 257
+ WTTMV GY + N+A+ L+ M+ +E N ++VL AC G ++LG ++
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARK--------------------------- 290
E + + + V+L +++V+MY KNG + A
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 291 ----LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
LF MP+ NVV+WN +I G G AL M++EG+ + G L AC
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCG-LKAC 248
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
GGLL +G+ + C + G+E ++D+ G L+ A ++
Sbjct: 249 SFGGLLTMGKQLHCCV-VKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 160/396 (40%), Gaps = 41/396 (10%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITM-RRHGALPGKHTFPFLLK 140
L+ A ++F + + N W T++ + P A+ LY M + + +LK
Sbjct: 56 LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLK 115
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
AC L + + V+ + K L D + N +V Y +G L++A F EI S +
Sbjct: 116 AC-GLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSST 174
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVA------------------------------EGF 230
W T++ GY + +EA+ LF M EG
Sbjct: 175 SWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGL 234
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
+G L L AC+ G L +G+++H + G+E SAL++MY+ G++ A
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 291 LFDGMP---ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
+F +V WN M+ G + E AL L + + + + T G L C
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF-DSYTLSGALKICI 353
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVIL 407
+ L +G V S+ V G E +VDL G + +A +L +P K D++
Sbjct: 354 NYVNLRLGLQVH-SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAF 411
Query: 408 GALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVS 443
L+ G +A + E++ L D VS
Sbjct: 412 SGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVS 447
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 237 LASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP 296
+A+ L C + + GE I + +G+ V + + +++MY ++ A K+FD M
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 297 ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
ERN+VTW M+ G + G A+ L+ M N+ + VL AC G + +G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 357 DVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
V+ + + + +VD+ + G+L+EA K
Sbjct: 128 LVYERIGK-ENLRGDVVLMNSVVDMYVKNGRLIEANSSFK 166
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 202/403 (50%), Gaps = 38/403 (9%)
Query: 36 PTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSI 95
P + C+ QLKQ+H +++ ND G+ +AS +F+ +
Sbjct: 21 PEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSF--GETQYASLVFNQL 78
Query: 96 HQPNTFMWNTLIRA---QRHPQTALSLYITMR-RHGALPGKHTFPFLLKACSSLTPALPV 151
P+TF WN +IR+ P+ AL L+I M H + K TFPF++KAC + + ++ +
Sbjct: 79 QSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLA-SSSIRL 137
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCG--- 208
QVH +K G D N L+ Y G R VFD++P RS+ WTTM+ G
Sbjct: 138 GTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVS 197
Query: 209 ----------------------------YAQNFCSNEALALFEGMVAEGFEPNGATLASV 240
Y +N +EA LF M + +PN T+ ++
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 241 LSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV 300
L A + G L +G +H++ G + LG+AL++MY+K G++ ARK+FD M +++
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 301 VTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC 360
TWN MI L HG E+ALSLFE ME+E P+ +TF+GVLSAC + G + G F
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 361 SMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPD 403
M VYGI P EH CM+ LL + ++ +A L++ M PD
Sbjct: 378 RMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 218/424 (51%), Gaps = 37/424 (8%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI--RAQR-HPQTALSLYITMRRHGALPGKHTFPFLL 139
G L A +F S+ + + WNT++ AQ + AL Y RR G + +F LL
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC + L +++Q H VL G + ++ ++ Y+ G + A+ FDE+ + +
Sbjct: 187 TACVK-SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 200 SLWTTMVCGYAQN---------FCS----------------------NEALALFEGMVAE 228
+WTT++ GYA+ FC N AL LF M+A
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
G +P T +S L A A L G+ IH +M V I+ S+L++MY+K+G++ +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 289 RKLFDGMPER-NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
++F ++ + V WN MI LA HG AL + ++M K V PN T + +L+AC
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ-PNRTTLVVILNACS 424
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVIL 407
H GL++ G F SM +GI P EHY C++DLLGR G E I+ MP++PD I
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIW 484
Query: 408 GALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
A+L + GN E+ K +E++ L+P++ ++ LS++YA+ G+W+ V +LR MK+
Sbjct: 485 NAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKR 544
Query: 468 RLKK 471
R+ K
Sbjct: 545 RVNK 548
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 22/319 (6%)
Query: 123 MRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG 182
+R L H +K C A V Q+H L + N +V Y SG
Sbjct: 77 FKRPNTLLSNHLIGMYMK-CGKPIDACKVFDQMHLRNL--------YSWNNMVSGYVKSG 127
Query: 183 DLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLS 242
LV AR VFD +P R + W TMV GYAQ+ +EAL ++ G + N + A +L+
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 243 ACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVT 302
AC +S L+L + H + V G V+L ++++ YAK G + A++ FD M +++
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 303 WNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM 362
W +I G A G +E A LF M ++ N V++ +++ G + D+F M
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEK-----NPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 363 KTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGN 419
G++P+ + + L KE+ M +P+ +++ +L++ G+
Sbjct: 303 -IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 420 TEVAKVVTEEILALEPDNH 438
E +E + + D H
Sbjct: 362 LE----ASERVFRICDDKH 376
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 48/296 (16%)
Query: 210 AQNFCS--------NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
AQ+F S ++A++ E + +G LAS+L C + L+ G+ IH ++
Sbjct: 14 AQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLK 73
Query: 262 VKGVEV-GVILGSALVNM-------------------------------YAKNGAIAMAR 289
+ G + +L + L+ M Y K+G + AR
Sbjct: 74 ITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRAR 133
Query: 290 KLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
+FD MPER+VV+WN M+ G A G++ +AL ++ + G+ N+ +F G+L+AC
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF-NEFSFAGLLTACVKS 192
Query: 350 GLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGA 409
L + R + V G + ++D + G++ AK M K D+ I
Sbjct: 193 RQLQLNRQAHGQV-LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTT 250
Query: 410 LLEASKNIGNTEVAKVVTEEILALEPDNHGVH-VSLSNMYAEAGEWQDVLRLRKTM 464
L+ +G+ E A E++ P+ + V +L Y G L L + M
Sbjct: 251 LISGYAKLGDMEAA----EKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 174/291 (59%), Gaps = 5/291 (1%)
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACA 245
A+ V +++ W M+ GY +N EAL + M++ +PN + AS L+ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 246 RSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNG 305
R G L + +H M G+E+ IL SALV++YAK G I +R++F + +V WN
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 306 MICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTV 365
MI G ATHG +A+ +F ME E V+ P+ +TF+G+L+ C H GLL+ G++ F M
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVS-PDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 366 YGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKV 425
+ I+PK+EHYG MVDLLGR G++ EA ELI+ MP +PDVVI +LL +S+ N E+ ++
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 426 VTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
+ L G +V LSN+Y+ +W+ ++R+ M +E ++K G S
Sbjct: 356 AIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKS 403
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 7/252 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
G+ A ++ + N WN +I R ++ + +L + P K +F
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L AC+ L L K VH+ ++ G+ L++ +++ LV Y+ GD+ +R VF +
Sbjct: 172 LAACARLGD-LHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND 230
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+S+W M+ G+A + + EA+ +F M AE P+ T +L+ C+ G LE G+
Sbjct: 231 VSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG 290
Query: 259 FM-RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHV 316
M R ++ + A+V++ + G + A +L + MP E +VV W ++ T+ +
Sbjct: 291 LMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNP 350
Query: 317 EDALSLFENMEK 328
E +N+ K
Sbjct: 351 ELGEIAIQNLSK 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 6/211 (2%)
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
G+ + L S ++A R L R+ + + GV + ++ K G +A
Sbjct: 60 GYGTYPSLLVSTVAAYRRCNRSYLARRL--LLWFLSLSPGVCNINLIIESLMKIGESGLA 117
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
+K+ ++NV+TWN MI G + E+AL +NM PN +F L+AC
Sbjct: 118 KKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACAR 177
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
G L + V S+ GIE +VD+ + G + ++E+ + + DV I
Sbjct: 178 LGDLHHAKWVH-SLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK-RNDVSIWN 235
Query: 409 ALLEASKNIG-NTEVAKVVTE-EILALEPDN 437
A++ G TE +V +E E + PD+
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDS 266
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 201/399 (50%), Gaps = 5/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
G L A I + W T+I AL+ + M G + +
Sbjct: 539 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC+ L AL +Q+HA G D N LV YS G + ++ F++ +
Sbjct: 599 SACAGL-QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +V G+ Q+ + EAL +F M EG + N T S + A + + ++ G+++H
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G + + +AL++MYAK G+I+ A K F + +N V+WN +I + HG +A
Sbjct: 718 ITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEA 777
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L F+ M V PN VT +GVLSAC H GL+D G F SM + YG+ PK EHY C+V
Sbjct: 778 LDSFDQMIHSNVR-PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
D+L R G L AKE I+ MP KPD ++ LL A N E+ + +L LEP++
Sbjct: 837 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA 896
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V LSN+YA + +W R+ MKE+ +KK PG S +
Sbjct: 897 TYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 157/306 (51%), Gaps = 7/306 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR--AQRH-PQTALSLYITMRRHGALPGKHTFPFLL 139
GDL A ++F + + F WN +I+ A R+ L++ M P + TF +L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+AC + A V +Q+HA +L GL + V N L+ YS +G + AR VFD + +
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
S W M+ G ++N C EA+ LF M G P +SVLSAC + LE+GE++H
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G + +ALV++Y G + A +F M +R+ VT+N +I GL+ G+ E A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCM 378
+ LF+ M +G+ P+ T ++ AC G L G+ + + K + KIE G +
Sbjct: 374 MELFKRMHLDGLE-PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GAL 430
Query: 379 VDLLGR 384
++L +
Sbjct: 431 LNLYAK 436
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 12/314 (3%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKACSS 144
A R+F + + W +I + A+ L+ M G +P + F +L AC
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
+ +L + +Q+H VLK G D++V N LV Y G+L+ A +F + R + T
Sbjct: 301 I-ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
++ G +Q +A+ LF+ M +G EP+ TLAS++ AC+ G L G+++H + G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+ AL+N+YAK I A F NVV WN M+ + ++ +F
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS-MKTVYGIEPKIEHYGC--MVDL 381
M+ E + VPN T+ +L C G L++G + +KT + ++ Y C ++D+
Sbjct: 480 QMQIEEI-VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDM 534
Query: 382 LGRGGKLLEAKELI 395
+ GKL A +++
Sbjct: 535 YAKLGKLDTAWDIL 548
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 32/356 (8%)
Query: 105 TLIRAQRHPQTALSLYIT------------MRRHGALPGKHTFPFLLKACSSLTPALPVH 152
TL +R A+S+YI+ + G P T +LL+ C +L
Sbjct: 45 TLCGTRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEG 104
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
+++H+ +LK GL + ++ L Y GDL A VFDE+P R++ W M+ A
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSG--CLELGERIHEFMRVKGVEVGVI 270
E LF MV+E PN T + VL AC R G ++ E+IH + +G+ +
Sbjct: 165 NLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
+ + L+++Y++NG + +AR++FDG+ ++ +W MI GL+ + +A+ LF +M G
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 331 VAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI----EHYGC--MVDLLGR 384
+ +P F VLSAC L++G + ++G+ K+ + Y C +V L
Sbjct: 284 I-MPTPYAFSSVLSACKKIESLEIG-------EQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE--ILALEPDNH 438
G L+ A+ + M + D V L+ G E A + + + LEPD++
Sbjct: 336 LGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 151/344 (43%), Gaps = 7/344 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
G+L A IFS++ Q + +NTLI + + A+ L+ M G P +T L+
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
ACS+ L +Q+HA+ K G ++ + L+ Y+ D+ A F E ++
Sbjct: 397 VACSA-DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
LW M+ Y + +F M E PN T S+L C R G LELGE+IH
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ ++ + S L++MYAK G + A + ++VV+W MI G + + A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L+ F M G+ ++V +SAC L G+ + + V G + +V
Sbjct: 576 LTTFRQMLDRGIR-SDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALV 633
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
L R GK +E L D + AL+ + GN E A
Sbjct: 634 TLYSRCGK-IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 152/325 (46%), Gaps = 6/325 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLL 139
D+ A F N +WN ++ A + + ++ M+ +P ++T+P +L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
K C L L + +Q+H+ ++K L+++V + L+ Y+ G L A + + +
Sbjct: 498 KTCIRLGD-LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WTTM+ GY Q ++AL F M+ G + L + +SACA L+ G++IH
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
V G + +ALV +Y++ G I + F+ + + WN ++ G G+ E+A
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L +F M +EG+ N+ TF + A + G+ V + T G + + E ++
Sbjct: 677 LRVFVRMNREGID-NNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALI 734
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDV 404
+ + G + +A++ + K +V
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNEV 759
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 206/399 (51%), Gaps = 4/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G+++ + R+ + + + WN LI P AL+ + TMR G T +L
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC L K +HA+++ G D HV N L+ Y+ GDL ++ +F+ + +R++
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI 530
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W M+ A + E L L M + G + + + LSA A+ LE G+++H
Sbjct: 531 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 590
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
G E + +A +MY+K G I K+ R++ +WN +I L HG+ E+
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 650
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ F M + G+ P VTF+ +L+AC HGGL+D G + + +G+EP IEH C++
Sbjct: 651 CATFHEMLEMGIK-PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 709
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLLGR G+L EA+ I MP KP+ ++ +LL + K GN + + E + LEP++
Sbjct: 710 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 769
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
V+V SNM+A G W+DV +RK M + +KK S V
Sbjct: 770 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 808
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 177/351 (50%), Gaps = 9/351 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G++ +A+ IF + + +T WN++ A H + + ++ MRR T LL
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ + +H V+K G V N L+R Y+ +G V+A VF ++P++ L
Sbjct: 269 SVLGHVDHQ-KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 327
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +++ + + S +AL L M++ G N T S L+AC E G +H
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 387
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ V G+ I+G+ALV+MY K G ++ +R++ MP R+VV WN +I G A + A
Sbjct: 388 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 447
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSAC-CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
L+ F+ M EGV+ N +T + VLSAC G LL+ G+ + + + G E +
Sbjct: 448 LAAFQTMRVEGVS-SNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSL 505
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN-TEVAKVVTE 428
+ + + G L +++L G+ +++ A+L A+ + G+ EV K+V++
Sbjct: 506 ITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 158/342 (46%), Gaps = 8/342 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTL----IRAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
G + A +F + N WNT+ +R + + + + M G P L
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLE-GMEFFRKMCDLGIKPSSFVIASL 64
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+ AC QVH V K GL D +V+ ++ Y V G + +R VF+E+P R+
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ WT+++ GY+ E + +++GM EG N +++ V+S+C LG +I
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
+ G+E + + ++L++M G + A +FD M ER+ ++WN + A +GH+E+
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
+ +F M + V N T +LS H GR + + G + + +
Sbjct: 245 SFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIH-GLVVKMGFDSVVCVCNTL 302
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNT 420
+ + G+ +EA + K MP K D++ +L+ + N G +
Sbjct: 303 LRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGRS 343
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G ++ + ++F + N W +L+ + P+ + +Y MR G +++ ++
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+C L + +Q+ V+K GL V N L+ G++ A ++FD++ R
Sbjct: 168 SSCGLLKDE-SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 226
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W ++ YAQN E+ +F M E N T++++LS + G IH
Sbjct: 227 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G + V + + L+ MYA G A +F MP +++++WN ++ G DA
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L L +M G +V N VTF L+AC + GR + + V G+ +V
Sbjct: 347 LGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALV 404
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+ G+ G++ E++ ++ MP + DVV AL+
Sbjct: 405 SMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 435
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 129/248 (52%), Gaps = 10/248 (4%)
Query: 178 YSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATL 237
Y+ G + AR +FD +P R+ W TM+ G + E + F M G +P+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 238 ASVLSACARSGCL-ELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP 296
AS+++AC RSG + G ++H F+ G+ V + +A++++Y G ++ +RK+F+ MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 297 ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL---D 353
+RNVV+W ++ G + G E+ + +++ M EGV N+ + V+S+C GLL
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGC-NENSMSLVISSC---GLLKDES 177
Query: 354 VGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEA 413
+GR + + G+E K+ ++ +LG G + A + M + D + ++ A
Sbjct: 178 LGRQIIGQV-VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAA 235
Query: 414 SKNIGNTE 421
G+ E
Sbjct: 236 YAQNGHIE 243
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 206/399 (51%), Gaps = 4/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G+++ + R+ + + + WN LI P AL+ + TMR G T +L
Sbjct: 394 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 453
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC L K +HA+++ G D HV N L+ Y+ GDL ++ +F+ + +R++
Sbjct: 454 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI 513
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W M+ A + E L L M + G + + + LSA A+ LE G+++H
Sbjct: 514 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 573
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
G E + +A +MY+K G I K+ R++ +WN +I L HG+ E+
Sbjct: 574 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 633
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ F M + G+ P VTF+ +L+AC HGGL+D G + + +G+EP IEH C++
Sbjct: 634 CATFHEMLEMGIK-PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 692
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLLGR G+L EA+ I MP KP+ ++ +LL + K GN + + E + LEP++
Sbjct: 693 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 752
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
V+V SNM+A G W+DV +RK M + +KK S V
Sbjct: 753 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 791
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 177/351 (50%), Gaps = 9/351 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G++ +A+ IF + + +T WN++ A H + + ++ MRR T LL
Sbjct: 192 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 251
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ + +H V+K G V N L+R Y+ +G V+A VF ++P++ L
Sbjct: 252 SVLGHVDHQ-KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 310
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +++ + + S +AL L M++ G N T S L+AC E G +H
Sbjct: 311 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 370
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ V G+ I+G+ALV+MY K G ++ +R++ MP R+VV WN +I G A + A
Sbjct: 371 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 430
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSAC-CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
L+ F+ M EGV+ N +T + VLSAC G LL+ G+ + + + G E +
Sbjct: 431 LAAFQTMRVEGVS-SNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSL 488
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN-TEVAKVVTE 428
+ + + G L +++L G+ +++ A+L A+ + G+ EV K+V++
Sbjct: 489 ITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 7/332 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G ++ + ++F + N W +L+ + P+ + +Y MR G +++ ++
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+C L + +Q+ V+K GL V N L+ G++ A ++FD++ R
Sbjct: 151 SSCGLLKDE-SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 209
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W ++ YAQN E+ +F M E N T++++LS + G IH
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G + V + + L+ MYA G A +F MP +++++WN ++ G DA
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 329
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L L +M G +V N VTF L+AC + GR + + V G+ +V
Sbjct: 330 LGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALV 387
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+ G+ G++ E++ ++ MP + DVV AL+
Sbjct: 388 SMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 8/326 (2%)
Query: 99 NTFMWNTL----IRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
N WNT+ +R + + + + M G P L+ AC Q
Sbjct: 5 NEVSWNTMMSGIVRVGLYLE-GMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFC 214
VH V K GL D +V+ ++ Y V G + +R VF+E+P R++ WT+++ GY+
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 215 SNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSA 274
E + +++GM EG N +++ V+S+C LG +I + G+E + + ++
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVP 334
L++M G + A +FD M ER+ ++WN + A +GH+E++ +F M + V
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV- 242
Query: 335 NDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL 394
N T +LS H GR + + G + + ++ + G+ +EA +
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIH-GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 395 IKGMPWKPDVVILGALLEASKNIGNT 420
K MP K D++ +L+ + N G +
Sbjct: 302 FKQMPTK-DLISWNSLMASFVNDGRS 326
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 10/232 (4%)
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL-EL 252
+P R+ W TM+ G + E + F M G +P+ +AS+++AC RSG +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
G ++H F+ G+ V + +A++++Y G ++ +RK+F+ MP+RNVV+W ++ G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL---DVGRDVFCSMKTVYGIE 369
G E+ + +++ M EGV N+ + V+S+C GLL +GR + + G+E
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGC-NENSMSLVISSC---GLLKDESLGRQIIGQV-VKSGLE 175
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTE 421
K+ ++ +LG G + A + M + D + ++ A G+ E
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 200/404 (49%), Gaps = 23/404 (5%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGALPGK-----HT 134
G + A IF + + N W T+I R A L+ M + +T
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
++ +P+ + + + G G G++ AR VFD +
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFG--------------EVGEISKARRVFDLM 291
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
R + W M+ Y + EAL LF M +G P+ +L S+LS CA L+ G
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
++H + + V + S L+ MY K G + A+ +FD ++++ WN +I G A+HG
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH 374
E+AL +F M G +PN VT I +L+AC + G L+ G ++F SM++ + + P +EH
Sbjct: 412 LGEEALKIFHEMPSSG-TMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 375 YGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
Y C VD+LGR G++ +A ELI+ M KPD + GALL A K ++A+V +++ E
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENE 530
Query: 435 PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
PDN G +V LS++ A +W DV +RK M+ + K PG S +
Sbjct: 531 PDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 47/314 (14%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
NGLV Y + +V+AR VF+ +P R++ WT MV GY Q EA +LF M E
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----E 138
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGV-------------------------- 265
N + + G ++ ++++ M VK V
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM 198
Query: 266 -EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
E V+ + ++ Y +N + +ARKLF+ MPE+ V+W M+ G G +EDA FE
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFE 258
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M + V N ++ G + R VF M+ + + M+ R
Sbjct: 259 VMPMKPVIACN-----AMIVGFGEVGEISKARRVFDLME-----DRDNATWRGMIKAYER 308
Query: 385 GGKLLEAKELIKGMPW---KPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVH 441
G LEA +L M +P L ++L + + + + V ++ + D+ V+
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD-VY 367
Query: 442 VS--LSNMYAEAGE 453
V+ L MY + GE
Sbjct: 368 VASVLMTMYVKCGE 381
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 182 GDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVL 241
G + +AR FD + +++ W ++V GY N EA LF+ M E N + ++
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS----ERNVVSWNGLV 86
Query: 242 SACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVV 301
S ++ + + E M E V+ +A+V Y + G + A LF MPERN V
Sbjct: 87 SGYIKNRMIVEARNVFELM----PERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
+W M GL G ++ A L++ M V + V ++ C G +D R +F
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMM-----PVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 362 MKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
M+ E + + M+ + ++ A++L + MP K +V LL
Sbjct: 198 MR-----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLL 242
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 26/301 (8%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N +V Y +G +AR +FDE+ R++ W +V GY +N EA +FE M E
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----E 107
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
N + +++ + G + E + M + ++ L++ +G I ARKL
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKARKL 163
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
+D MP ++VV MI GL G V++A +F+ M + V VT+ +++
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV-----VTWTTMITGYRQNNR 218
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR--GGKLLEAKELIKGMPWKPDVVILGA 409
+DV R +F M P+ LLG G++ +A+E + MP KP V+ A
Sbjct: 219 VDVARKLFEVM-------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP-VIACNA 270
Query: 410 LLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
++ +G A+ V + +E ++ + Y G + L L M+++ +
Sbjct: 271 MIVGFGEVGEISKARRVFD---LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 470 K 470
+
Sbjct: 328 R 328
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 234 GATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS--ALVNMYAKNGAIAMARKL 291
G + +S +R G + + + ++ K + GS ++V+ Y NG AR+L
Sbjct: 17 GVNCSFEISRLSRIGKINEARKFFDSLQFKAI------GSWNSIVSGYFSNGLPKEARQL 70
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
FD M ERNVV+WNG++ G + + +A ++FE M + V V++ ++ G+
Sbjct: 71 FDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV-----VSWTAMVKGYMQEGM 125
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
+ +F M + + +G ++D G++ +A++L MP K DVV ++
Sbjct: 126 VGEAESLFWRMPERNEVSWTV-MFGGLID----DGRIDKARKLYDMMPVK-DVVASTNMI 179
Query: 412 EASKNIGNTEVAKVVTEEI 430
G + A+++ +E+
Sbjct: 180 GGLCREGRVDEARLIFDEM 198
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 220/440 (50%), Gaps = 48/440 (10%)
Query: 83 GDLTHASRIFSSI--HQPNTFMWNTLIRA-QRHPQ--TALSLYITMRRHGALPGKHTFPF 137
G++ A ++F I + + W TL+ + R+ ++ L++ MRR +
Sbjct: 57 GEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVC 116
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG--------------- 182
L C+ L L +Q H +K G+ V N L+ Y G
Sbjct: 117 LFGVCAKLED-LGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK 175
Query: 183 ----------------DLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
L R VF E+P R+ WT MV GY + E L L MV
Sbjct: 176 SVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMV 235
Query: 227 AE-GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG-------VILGSALVNM 278
G N TL S+LSACA+SG L +G +H + K + +G V++G+ALV+M
Sbjct: 236 FRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDM 295
Query: 279 YAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVT 338
YAK G I + +F M +RNVVTWN + GLA HG + +F M +E P+D+T
Sbjct: 296 YAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLT 353
Query: 339 FIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
F VLSAC H G++D G F S++ YG+EPK++HY CMVDLLGR G + EA+ L++ M
Sbjct: 354 FTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREM 412
Query: 399 PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVL 458
P P+ V+LG+LL + G E+A+ + E++ + P N + +SNMY G
Sbjct: 413 PVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIAD 472
Query: 459 RLRKTMKEERLKKVPGWSLV 478
LR ++++ ++K+PG S +
Sbjct: 473 GLRGSLRKRGIRKIPGLSSI 492
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 36/255 (14%)
Query: 137 FLLKACSSLTPALPVHKQVHAHVLKFGL--GLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
LL+ C+ + P K++HA + GL S+++N L + Y+ SG++V A+ +FDEI
Sbjct: 11 LLLRHCAHRSFLRP-GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEI 69
Query: 195 P--SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL 252
P + WTT++ +++ ++ LF M + E + ++ + CA+ L
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFD------------------- 293
++ H GV V + +AL++MY K G ++ +++F+
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 294 ------------GMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIG 341
MPERN V W M+ G G + L L M N VT
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 342 VLSACCHGGLLDVGR 356
+LSAC G L VGR
Sbjct: 250 MLSACAQSGNLVVGR 264
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 213/400 (53%), Gaps = 16/400 (4%)
Query: 88 ASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A +F + + + WN++I+ A+ ++ + + M G P + T +L ACS
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
+ L K +H +V++ + D +V L+ Y G+ A VF + W
Sbjct: 322 -SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ Y +A+ +++ MV+ G +P+ T SVL AC++ LE G++IH +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+E +L SAL++MY+K G A ++F+ +P+++VV+W MI +HG +AL F+
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M+K G+ P+ VT + VLSAC H GL+D G F M++ YGIEP IEHY CM+D+LGR
Sbjct: 501 EMQKFGLK-PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGR 559
Query: 385 GGKLLEAKELIKGMPWKPD-VVILGALLEA-----SKNIGNTEVAKVVTEEILALEPDNH 438
G+LLEA E+I+ P D +L L A ++G+ +A+++ E PD+
Sbjct: 560 AGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGD-RIARLLVENY----PDDA 614
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++ L N+YA W R+R MKE L+K PG S +
Sbjct: 615 STYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 197/436 (45%), Gaps = 44/436 (10%)
Query: 84 DLTHASRIFSSIH-QPNTFMWNTLIRAQRHPQTALSLYITMRR----HGALPGKHTFPFL 138
D A +F + + + ++WN+L+ +R +P TFP +
Sbjct: 54 DHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNV 113
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+KA +L + + +H V+K G D VA+ LV Y+ ++ VFDE+P R
Sbjct: 114 IKAYGALGREF-LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERD 172
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
++ W T++ + Q+ + +AL LF M + GFEPN +L +SAC+R LE G+ IH
Sbjct: 173 VASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHR 232
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
KG E+ + SALV+MY K + +AR++F MP +++V WN MI G G +
Sbjct: 233 KCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKS 292
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACC------HGGLLD-------VGRDVF--CSM- 362
+ + M EG P+ T +L AC HG + V D++ CS+
Sbjct: 293 CVEILNRMIIEGTR-PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLI 351
Query: 363 ------------KTVYGIEPK--IEHYGCMVDLLGRGGKLLEAKELIKGMPW---KPDVV 405
+TV+ K E + M+ G +A E+ M KPDVV
Sbjct: 352 DLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVV 411
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVS-LSNMYAEAGEWQDVLRLRKTM 464
++L A + E K + I + + +S L +MY++ G ++ R+ ++
Sbjct: 412 TFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 465 KEERLKKVPGWSLVTT 480
+ K V W+++ +
Sbjct: 472 PK---KDVVSWTVMIS 484
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 8/268 (2%)
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
LL+ C++ T +L K VH +L GL D + L+ Y D AR VF+ R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 198 S-LSLWTTMVCGYAQNFCSNEALALFEGMVAEGF-EPNGATLASVLSACARSGCLELGER 255
S + +W +++ GY++N ++ L +F+ ++ P+ T +V+ A G LG
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
IH + G V++ S+LV MYAK + ++FD MPER+V +WN +I G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF--CSMKTVYGIEPKIE 373
E AL LF ME G PN V+ +SAC L+ G+++ C K G E
Sbjct: 189 AEKALELFGRMESSGFE-PNSVSLTVAISACSRLLWLERGKEIHRKCVKK---GFELDEY 244
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWK 401
+VD+ G+ L A+E+ + MP K
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRK 272
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 216/433 (49%), Gaps = 39/433 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP----QTALSLYITMRRHGALPGKHTFPFL 138
G +HA ++F + + W +++ A +T G P F L
Sbjct: 52 GAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSAL 111
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+KAC++L ++ +QVH H + D V + LV Y+ G L A+ VFD I ++
Sbjct: 112 VKACANLG-SIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKN 170
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGM----------VAEGFEPNGA------------- 235
WT MV GYA++ EAL LF + + GF +G
Sbjct: 171 TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR 230
Query: 236 ---------TLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
L+S++ ACA G ++H + G + V + +AL++MYAK +
Sbjct: 231 ERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVI 290
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
A+ +F M R+VV+W +I G+A HG E AL+L+++M GV PN+VTF+G++ AC
Sbjct: 291 AAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVK-PNEVTFVGLIYAC 349
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVI 406
H G ++ GR++F SM YGI P ++HY C++DLLGR G L EA+ LI MP+ PD
Sbjct: 350 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 409
Query: 407 LGALLEASKNIGNTEVAKVVTEEIL-ALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
ALL A K G ++ + + ++ + + + ++ LSN+YA A W V R+ +
Sbjct: 410 WAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLG 469
Query: 466 EERLKKVPGWSLV 478
E ++K PG S V
Sbjct: 470 EMEVRKDPGHSSV 482
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 39/324 (12%)
Query: 149 LPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCG 208
L K +HAH++K G+ +AN LV Y G A VFDE+P R W +++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 209 YAQNFCSNEAL-ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
Q S + L + G P+ ++++ ACA G ++ G ++H V
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE--- 324
++ S+LV+MYAK G + A+ +FD + +N ++W M+ G A G E+AL LF
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 325 ----------------------------NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
M +E V + + + ++ AC + GR
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 357 DVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKN 416
V + G + + ++D+ + ++ AK++ M + DVV +L+
Sbjct: 259 QVH-GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR-DVVSWTSLIVGMAQ 316
Query: 417 IGNTEVAKVVTEEILALEPDNHGV 440
G E A + +++++ HGV
Sbjct: 317 HGQAEKALALYDDMVS-----HGV 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 241 LSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV 300
L CAR+ L + +H + G+ L + LVN+Y K GA + A ++FD MP R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 301 VTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC 360
+ W ++ L LS+F ++ P+D F ++ AC + G +D GR V C
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 361 S-MKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN 419
+ + Y + ++ +VD+ + G L AK + + K + + A++ G
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGR 186
Query: 420 TEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
E A E L N +L + + ++G+ + + M+ ER+
Sbjct: 187 KEEA---LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 162/257 (63%), Gaps = 1/257 (0%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
WT+++ G NF + +A F+ M+ G PN AT+ ++L AC ++ G+ IH +
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
V G+E + SAL++MY K G I+ A LF P++ VT+N MI A HG + A+
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVE 375
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
LF+ ME G + + +TF +L+AC H GL D+G+++F M+ Y I P++EHY CMVDL
Sbjct: 376 LFDQMEATGEKL-DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDL 434
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVH 441
LGR GKL+EA E+IK M +PD+ + GALL A +N GN E+A++ + + LEP+N G
Sbjct: 435 LGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNG 494
Query: 442 VSLSNMYAEAGEWQDVL 458
+ L+++YA AG W+ V+
Sbjct: 495 LLLTSLYANAGSWESVV 511
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 157/319 (49%), Gaps = 7/319 (2%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
+ +HAH++ G+ + +A LV Y G ++DAR VFDE+P R +S M+ A+N
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARN 95
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
E+L F M +G + + + S+L A E G+ IH + E +
Sbjct: 96 GYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIV 155
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
S+L++MY+K G + ARK+F + E+++V +N MI G A + ++AL+L ++M+ G+
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIK 215
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAK 392
P+ +T+ ++S H + ++ + + G +P + + ++ L + +A
Sbjct: 216 -PDVITWNALISGFSHMRNEEKVSEIL-ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 393 ELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG-VHVSLSNMY 448
+ K M P+ + LL A + + K + + ++HG V +L +MY
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 449 AEAGEWQDVLRL-RKTMKE 466
+ G + + L RKT K+
Sbjct: 334 GKCGFISEAMILFRKTPKK 352
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 112/229 (48%), Gaps = 6/229 (2%)
Query: 96 HQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH 152
++P+ W ++I H + A + M HG P T LL AC++L +
Sbjct: 249 YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLA-YMKHG 307
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
K++H + + GL V + L+ Y G + +A +F + P ++ + +M+ YA +
Sbjct: 308 KEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANH 367
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
+++A+ LF+ M A G + + T ++L+AC+ +G +LG+ + M+ K V +
Sbjct: 368 GLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEH 427
Query: 273 SA-LVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVEDA 319
A +V++ + G + A ++ M E ++ W ++ HG++E A
Sbjct: 428 YACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 236 TLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM 295
+ ++ A R G +H + G+ + + LV Y + G + ARK+FD M
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 296 PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLD-- 353
P+R++ MI A +G+ +++L F M K+G+ + FI LLD
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD---AFIVPSLLKASRNLLDRE 134
Query: 354 VGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEA 413
G+ + C + + E ++D+ + G++ A+++ + + D+V+ A++
Sbjct: 135 FGKMIHC-LVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISG 192
Query: 414 SKNIGNTEVAKVVTEE--ILALEPD 436
N + A + ++ +L ++PD
Sbjct: 193 YANNSQADEALNLVKDMKLLGIKPD 217
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 185/325 (56%), Gaps = 1/325 (0%)
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
QVH+ +++FG + L+ Y G ++ A+ VFD+ ++++ L TT++ Y Q+
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
EAL LF M + PN T A +L++ A L+ G+ +H + G V++G+
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
ALVNMYAK+G+I ARK F GM R++VTWN MI G + HG +AL F+ M G +
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG-EI 436
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
PN +TFIGVL AC H G ++ G F + + ++P I+HY C+V LL + G +A++
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED 496
Query: 394 LIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGE 453
++ P + DVV LL A N + K V E + P++ GV+V LSN++A++ E
Sbjct: 497 FMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSRE 556
Query: 454 WQDVLRLRKTMKEERLKKVPGWSLV 478
W+ V ++R M +KK PG S +
Sbjct: 557 WEGVAKVRSLMNNRGVKKEPGVSWI 581
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 8/335 (2%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHG-ALPGKHTFPFLLKACS 143
A ++F + + N W +++ ++ L L+ +M G + P + + K+CS
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
+ + + KQ H LK+GL V N LV YS+ +A V D++P LS+++
Sbjct: 148 N-SGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
+ + GY + E L + E F N T S L + L L ++H M
Sbjct: 207 SALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G V AL+NMY K G + A+++FD +N+ ++ E+AL+LF
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
M+ + V PN+ TF +L++ LL G D+ + G + +V++
Sbjct: 327 SKMDTKEVP-PNEYTFAILLNSIAELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIG 418
+ G + +A++ GM ++ D+V ++ + G
Sbjct: 385 KSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + +A R+F H N F+ T++ A + + AL+L+ M P ++TF LL
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ + L+ L +H VLK G V N LV Y+ SG + DAR F + R +
Sbjct: 346 NSIAELS-LLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG-ERIHE 258
W TM+ G + + EAL F+ M+ G PN T VL AC+ G +E G ++
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMI 307
M+ V+ + + +V + +K G A P E +VV W ++
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 14/278 (5%)
Query: 129 LPGKHTFPF-------LLKACSSLTPALPVHKQVHAHVL---KFGLGLDSHVANGLVRCY 178
+P PF LLK C++ + L + + +HAH++ + D++ N L+ Y
Sbjct: 21 VPKSKKTPFPIDRLNELLKVCAN-SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLY 79
Query: 179 SVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATL 237
+ V AR +FD +P R++ W M+ GY + E L LF+ M G PN
Sbjct: 80 VKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVA 139
Query: 238 ASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPE 297
V +C+ SG +E G++ H G+ + + LV MY+ A ++ D +P
Sbjct: 140 TVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY 199
Query: 298 RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRD 357
++ ++ + G G ++ L + E V N++T++ L + L++
Sbjct: 200 CDLSVFSSALSGYLECGAFKEGLDVLRKTANEDF-VWNNLTYLSSLRLFSNLRDLNLALQ 258
Query: 358 VFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
V M +G ++E G ++++ G+ GK+L A+ +
Sbjct: 259 VHSRM-VRFGFNAEVEACGALINMYGKCGKVLYAQRVF 295
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 197/402 (49%), Gaps = 38/402 (9%)
Query: 110 QRHPQTALSLYITMRRHGALP-GKHTFPFLLKACSS-LTPALPVHKQVHAHVLKFGLGLD 167
Q + + AL+L++ M ALP H F LK+C++ P L VHAH +K +
Sbjct: 25 QGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLG--GSVHAHSVKSNFLSN 82
Query: 168 SHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM-- 225
V L+ Y + AR +FDEIP R+ +W M+ Y EA+ L+E M
Sbjct: 83 PFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDV 142
Query: 226 ---------VAEG----------------------FEPNGATLASVLSACARSGCLELGE 254
+ +G F+PN TL +++SAC+ G L +
Sbjct: 143 MPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIK 202
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
IH + +E L S LV Y + G+I + +FD M +R+VV W+ +I A HG
Sbjct: 203 EIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHG 262
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH 374
E AL F+ ME V P+D+ F+ VL AC H GL D F M+ YG+ +H
Sbjct: 263 DAESALKTFQEMELAKV-TPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDH 321
Query: 375 YGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
Y C+VD+L R G+ EA ++I+ MP KP GALL A +N G E+A++ E+L +E
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVE 381
Query: 435 PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
P+N +V L +Y G ++ RLR MKE +K PG S
Sbjct: 382 PENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 51/279 (18%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLK- 140
++HA ++F I Q N +WN +I H + A+ LY M +P + +F ++K
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPNESSFNAIIKG 155
Query: 141 -----------------------------------ACSSLTPALPVHKQVHAHVLKFGLG 165
ACS++ A + K++H++ + +
Sbjct: 156 LVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG-AFRLIKEIHSYAFRNLIE 214
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM 225
+ +GLV Y G +V + VFD + R + W++++ YA + + AL F+ M
Sbjct: 215 PHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM 274
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG----SALVNMYAK 281
P+ +VL AC+ +G + E + F R++G + G+ S LV++ ++
Sbjct: 275 ELAKVTPDDIAFLNVLKACSHAGLAD--EALVYFKRMQG-DYGLRASKDHYSCLVDVLSR 331
Query: 282 NGAIAMARKLFDGMPERNVV-TWNGMICGLATHGHVEDA 319
G A K+ MPE+ TW ++ +G +E A
Sbjct: 332 VGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 37/270 (13%)
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASV-LSACARSGCLELGERIHEFMR 261
T + YA +AL LF M + P A + S+ L +CA + LG +H
Sbjct: 16 TKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSV 75
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
+G AL++MY K +++ ARKLFD +P+RN V WN MI G V++A+
Sbjct: 76 KSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVE 135
Query: 322 LFENM-----EKEGVAV---------------------------PNDVTFIGVLSACCHG 349
L+E M E A+ PN +T + ++SAC
Sbjct: 136 LYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAI 195
Query: 350 GLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGA 409
G + +++ S IEP + +V+ GR G ++ + + M + DVV +
Sbjct: 196 GAFRLIKEIH-SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR-DVVAWSS 253
Query: 410 LLEASKNIGNTEVA-KVVTE-EILALEPDN 437
L+ A G+ E A K E E+ + PD+
Sbjct: 254 LISAYALHGDAESALKTFQEMELAKVTPDD 283
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 224/448 (50%), Gaps = 9/448 (2%)
Query: 36 PTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSI 95
+L C ++E + +H ++V + + H D+ A ++F +
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYR-HGFIGDQLVGCYLRLGHDVC-AEKLFDEM 92
Query: 96 HQPNTFMWNTLIRAQRHPQTALSLYITMRRH-----GALPGKHTFPFLLKACSSLTPALP 150
+ + WN+LI + + R G P + TF ++ AC +
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV-YGGSKE 151
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYA 210
+ +H V+KFG+ + V N + Y +GDL + +F+++ ++L W TM+ +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI 270
QN + + LA F G EP+ AT +VL +C G + L + IH + G
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
+ +AL+++Y+K G + + +F + + + W M+ ATHG DA+ FE M G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 331 VAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLE 390
++ P+ VTF +L+AC H GL++ G+ F +M Y I+P+++HY CMVDLLGR G L +
Sbjct: 332 IS-PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQD 390
Query: 391 AKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAE 450
A LIK MP +P + GALL A + +T++ E + LEP + +V LSN+Y+
Sbjct: 391 AYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSA 450
Query: 451 AGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+G W+D R+R MK++ L + G S +
Sbjct: 451 SGLWKDASRIRNLMKQKGLVRASGCSYI 478
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 226/475 (47%), Gaps = 43/475 (9%)
Query: 41 LADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNT 100
L + ++ L QVHA+++ + F D GD ++ I+ SI +
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWD--SSWAIRLLKSSSRFGDSSYTVSIYRSIGK--L 83
Query: 101 FMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHA 157
+ N + +A P+ AL Y + R G +P +TF L+ +C T + K H
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLI-SCIEKTCCVDSGKMCHG 142
Query: 158 HVLKFGLGLDSHVANGLVRCYSV-------------------------------SGDLVD 186
+K G V N L+ Y+ +GD++
Sbjct: 143 QAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 187 ARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACAR 246
A +FDE+P +++ W M+ Y +++LF MV GF+ N +TL +L+AC R
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 247 SGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
S L+ G +H + + V++ +AL++MY K + +AR++FD + RN VTWN M
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
I HG E L LFE M G+ P++VTF+GVL C GL+ G+ + M +
Sbjct: 323 ILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEF 381
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVA 423
I+P H CM +L G EA+E +K +P + P+ LL +S+ GN +
Sbjct: 382 QIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLG 441
Query: 424 KVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ + + ++ +P N+ + L N+Y+ G W+DV R+R+ +KE ++ ++PG LV
Sbjct: 442 ESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLV 496
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 229/448 (51%), Gaps = 9/448 (2%)
Query: 37 TLAVLADKCTTVEQL---KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
T + + C+ V L KQ+H+Q + F D ASR+F
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTIKVG-FEDSTDVGNALVDMYMKCSASEVEASRVFG 385
Query: 94 SIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALP 150
++ PN W TLI Q L + M + P T +L+ACS L
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRR 445
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYA 210
V ++HA++L+ + + V N LV Y+ S + A V + R +T++V +
Sbjct: 446 V-LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFN 504
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI 270
+ AL++ M +G + +L +SA A G LE G+ +H + G
Sbjct: 505 ELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAAS 564
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
+ ++LV+MY+K G++ A+K+F+ + +VV+WNG++ GLA++G + ALS FE M +
Sbjct: 565 VLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKE 624
Query: 331 VAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLE 390
P+ VTF+ +LSAC +G L D+G + F MK +Y IEP++EHY +V +LGR G+L E
Sbjct: 625 TE-PDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEE 683
Query: 391 AKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAE 450
A +++ M KP+ +I LL A + GN + + + + LAL P + +++ L+++Y E
Sbjct: 684 ATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDE 743
Query: 451 AGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+G+ + + R M E+RL K G S V
Sbjct: 744 SGKPELAQKTRNLMTEKRLSKKLGKSTV 771
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 193/434 (44%), Gaps = 48/434 (11%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G A +FSS+ +T W +I + R + AL Y M + G P + TF LL
Sbjct: 173 GQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
A S L L K +H++++ G+ L+ + LV YS + DA V + + +
Sbjct: 233 GASSFL--GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
LWT++V G+ +N + EA+ F M + G +PN T +++LS C+ L+ G++IH
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ 350
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAM-ARKLFDGMPERNVVTWNGMICGLATHGHVED 318
G E +G+ALV+MY K A + A ++F M NVV+W +I GL HG V+D
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACC-----------HGGLLDVGRD----VFCSMK 363
L M K V PN VT GVL AC H LL D V S+
Sbjct: 411 CFGLLMEMVKREVE-PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLV 469
Query: 364 TVYGIEPKIEH---------------YGCMV---DLLGRGGKLLEAKELIKGMPWKPDVV 405
Y K+++ Y +V + LG+ L + G + D +
Sbjct: 470 DAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQL 529
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILALEPDNHG---VHVSLSNMYAEAGEWQDVLRLRK 462
L + AS N+G E K + +++ G V SL +MY++ G +D +K
Sbjct: 530 SLPGFISASANLGALETGKHL--HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA---KK 584
Query: 463 TMKEERLKKVPGWS 476
+E V W+
Sbjct: 585 VFEEIATPDVVSWN 598
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 155/312 (49%), Gaps = 12/312 (3%)
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
+L C S + + +H +H V+KFGL + + N L+ Y + + +AR +FDE+ R
Sbjct: 30 ILSFCESNSSRIGLH--IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR 87
Query: 198 SLSLWTTMVCGY--AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
++ WT M+ + +Q F S AL+LFE M+A G PN T +SV+ +CA + G R
Sbjct: 88 TVFAWTVMISAFTKSQEFAS--ALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGR 145
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
+H + G E ++GS+L ++Y+K G A +LF + + ++W MI L
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARK 205
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
+AL + M K GV PN+ TF+ +L A G L+ G+ + ++ V GI +
Sbjct: 206 WREALQFYSEMVKAGVP-PNEFTFVKLLGASSFLG-LEFGKTIHSNI-IVRGIPLNVVLK 262
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEA-SKNIGNTEVAKVVTE-EILAL 433
+VD + K+ +A ++ + DV + +++ +N+ E E L L
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 434 EPDNHGVHVSLS 445
+P+N LS
Sbjct: 322 QPNNFTYSAILS 333
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 9/323 (2%)
Query: 87 HASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKACS 143
+A ++F + F W +I A Q +ALSL+ M G P + TF ++++C+
Sbjct: 76 NARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA 135
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
L + +VH V+K G +S V + L YS G +A +F + + WT
Sbjct: 136 GLRD-ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWT 194
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
M+ EAL + MV G PN T +L A + G LE G+ IH + V+
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVR 253
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G+ + V+L ++LV+ Y++ + A ++ + E++V W ++ G + ++A+ F
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
M G+ PN+ T+ +LS C LD G+ + V G E + +VD+
Sbjct: 314 LEMRSLGLQ-PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYM 371
Query: 384 R-GGKLLEAKELIKGMPWKPDVV 405
+ +EA + M P+VV
Sbjct: 372 KCSASEVEASRVFGAMV-SPNVV 393
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 217/441 (49%), Gaps = 48/441 (10%)
Query: 84 DLTHASRIFSSIH----QPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFP 136
D A +IF + +P+ W +++ + L + MR G
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALA 298
Query: 137 FLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
C+ L AL + ++VH +V+K G N L+ Y G + DA +F +I +
Sbjct: 299 VFFSVCAEL-EALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALF----------------------------EGMVAE 228
+ + W +++ + +EAL+LF +G +
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 229 GFE-----------PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
E N T+ +LS CA L LG IH + + +++ +ALVN
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 278 MYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV 337
MYAK G ++ +F+ + ++++++WN +I G HG E ALS+F+ M G P+ +
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH-PDGI 536
Query: 338 TFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKG 397
+ VLSAC H GL++ GR++F SM +G+EP+ EHY C+VDLLGR G L EA E++K
Sbjct: 537 ALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKN 596
Query: 398 MPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDV 457
MP +P V +LGALL + + N ++A+ + ++ LEP+ G ++ LSN+Y+ G W++
Sbjct: 597 MPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEES 656
Query: 458 LRLRKTMKEERLKKVPGWSLV 478
+R K++ LKKV G S +
Sbjct: 657 ANVRALAKKKDLKKVSGSSWI 677
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 157/363 (43%), Gaps = 46/363 (12%)
Query: 45 CTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQ---PNTF 101
C T +Q +QVHAQ V+ + F G L A +F ++ +
Sbjct: 66 CLTAQQCRQVHAQ-VLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLR 124
Query: 102 MWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAH 158
+WN++++A + AL LY MR+ G + P +L+AC L + + H
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGR-FGLCRAFHTQ 183
Query: 159 VLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEA 218
V++ GL + HV N L+ Y +G + DA +F E+P R+ W M+ G++Q + A
Sbjct: 184 VIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESA 243
Query: 219 LALFEGMVAEGFEPNGATLASVL-----------------------------------SA 243
+ +FE M E F+P+ T SVL S
Sbjct: 244 VKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSV 303
Query: 244 CARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTW 303
CA L + E++H ++ G E + +AL+++Y K G + A LF + + + +W
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 304 NGMICGLATHGHVEDALSLFENMEKEGVAV---PNDVTFIGVLSACCHGGLLDVGRDVFC 360
N +I G +++ALSLF +E+ N VT+ V+ C G D + F
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 361 SMK 363
M+
Sbjct: 424 QMQ 426
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 14/250 (5%)
Query: 83 GDLTHASRIFSSIHQ--------PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPG 131
G L A +FS + + N W ++I+ Q +L + M+ L
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Query: 132 KHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVF 191
T +L C+ L PAL + +++H HV++ + + V N LV Y+ G L + VF
Sbjct: 434 SVTICCILSICAEL-PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 192 DEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
+ I + L W +++ GY + + +AL++F+ M++ GF P+G L +VLSAC+ +G +E
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 252 LGERIHEFMRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICG 309
G I M + G+E + +V++ + G + A ++ MP E V ++
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNS 612
Query: 310 LATHGHVEDA 319
H +V+ A
Sbjct: 613 CRMHKNVDIA 622
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 209/394 (53%), Gaps = 8/394 (2%)
Query: 90 RIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
R+ +I + W +I R R + AL ++ M + G+ ++ +C+ L
Sbjct: 301 RVLETIPNKDVVCWTVMISGLMRLGR-AEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
+ + VH +VL+ G LD+ N L+ Y+ G L + +F+ + R L W +
Sbjct: 360 -GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAI 418
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEP-NGATLASVLSACARSGCLELGERIHEFMRVKG 264
+ GYAQN +AL LFE M + + + T+ S+L AC+ +G L +G+ IH +
Sbjct: 419 ISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF 478
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+ ++ +ALV+MY+K G + A++ FD + ++VV+W +I G HG + AL ++
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYS 538
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
G+ PN V F+ VLS+C H G++ G +F SM +G+EP EH C+VDLL R
Sbjct: 539 EFLHSGME-PNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSL 444
++ +A + K +P + +LG +L+A + G TEV ++ E+++ L+P + G +V L
Sbjct: 598 AKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKL 657
Query: 445 SNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ +A W DV M+ LKK+PGWS +
Sbjct: 658 GHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKI 691
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 9/382 (2%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A +F + Q + WNT+I + L L MR G P + TF L +
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
+ L + + +H ++K G +D H+ L+ Y G + V + IP++ + WT
Sbjct: 258 MCD-LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTV 316
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
M+ G + + +AL +F M+ G + + +ASV+++CA+ G +LG +H ++ G
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG 376
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFE 324
+ ++L+ MYAK G + + +F+ M ER++V+WN +I G A + + AL LFE
Sbjct: 377 YTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFE 436
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M+ + V + T + +L AC G L VG+ + C + + I P +VD+ +
Sbjct: 437 EMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSK 495
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVHV 442
G L A+ + WK DVV G L+ G ++A + E L +EP NH + +
Sbjct: 496 CGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEP-NHVIFL 553
Query: 443 SLSNMYAEAGEWQDVLRLRKTM 464
++ + + G Q L++ +M
Sbjct: 554 AVLSSCSHNGMVQQGLKIFSSM 575
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 179/355 (50%), Gaps = 15/355 (4%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
+ S + +S N+ + N L H Q LS + +M + LP TFP LLKAC+S
Sbjct: 1 MIRTSSVLNSTKYFNSHI-NHLSSHGDHKQV-LSTFSSMLANKLLPDTFTFPSLLKACAS 58
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
L L +H VL G D ++++ LV Y+ G L AR VF+E+ R + WT
Sbjct: 59 L-QRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTA 117
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER--IHEFMRV 262
M+ Y++ EA +L M +G +P TL +L SG LE+ + +H+F +
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVI 172
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
G + + + ++++N+Y K + A+ LFD M +R++V+WN MI G A+ G++ + L L
Sbjct: 173 YGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKL 232
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCMVDL 381
M +G+ P+ TF LS L++GR + C + KT + ++ ++ ++ +
Sbjct: 233 LYRMRGDGLR-PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITM 289
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
+ GK + +++ +P K DVV ++ +G E A +V E+L D
Sbjct: 290 YLKCGKEEASYRVLETIPNK-DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 143/331 (43%), Gaps = 13/331 (3%)
Query: 34 DPPTLAVLADKCTTVEQLK---QVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASR 90
D T L C ++++L +H Q++V +D G L HA +
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKF--GLLAHARK 102
Query: 91 IFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLLKACSSLTP 147
+F + + + W +I A SL MR G PG T +L +T
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 148 ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVC 207
+ +H + +G D V N ++ Y + DA+ +FD++ R + W TM+
Sbjct: 163 L----QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
GYA +E L L M +G P+ T + LS LE+G +H + G +V
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENME 327
+ L +AL+ MY K G + ++ + +P ++VV W MI GL G E AL +F M
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 328 KEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
+ G + ++ V+++C G D+G V
Sbjct: 339 QSGSDLSSE-AIASVVASCAQLGSFDLGASV 368
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 115/232 (49%), Gaps = 10/232 (4%)
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
+ L+ F M+A P+ T S+L ACA L G IH+ + V G + S+LV
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 277 NMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPND 336
N+YAK G +A ARK+F+ M ER+VV W MI + G V +A SL M +G+ P
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK-PGP 147
Query: 337 VTFIGVLSACCHGGLLDVGR-DVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
VT + +LS G+L++ + +YG + I M++L + + +AK+L
Sbjct: 148 VTLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLF 202
Query: 396 KGMPWKPDVVILGALLEASKNIGN-TEVAKVVTE-EILALEPDNHGVHVSLS 445
M + D+V ++ ++GN +E+ K++ L PD SLS
Sbjct: 203 DQMEQR-DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 206/401 (51%), Gaps = 16/401 (3%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLK 140
DL A ++F + + N W L+ A + A S++ M L+K
Sbjct: 160 DLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVK 219
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
+ + + ++ + +D Y+ GD+V AR +F+E +
Sbjct: 220 SGDLVNAKKLFDEMPKRDIISYTSMIDG---------YAKGGDMVSARDLFEEARGVDVR 270
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W+ ++ GYAQN NEA +F M A+ +P+ + ++SAC++ GC EL E++ ++
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 261 --RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
R+ ++ AL++M AK G + A KLF+ MP+R++V++ M+ G+A HG +
Sbjct: 331 HQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSE 389
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
A+ LFE M EG+ VP++V F +L C L++ G F M+ Y I +HY C+
Sbjct: 390 AIRLFEKMVDEGI-VPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
V+LL R GKL EA ELIK MP++ G+LL GNTE+A+VV + LEP +
Sbjct: 449 VNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSA 508
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVT 479
G +V LSN+YA W DV LR M E + K+ G S ++
Sbjct: 509 GSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWIS 549
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 176/382 (46%), Gaps = 20/382 (5%)
Query: 37 TLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIH 96
+L L C + L Q+HA+++ D L+++S +F +
Sbjct: 12 SLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSS-LSYSSSVFERVP 70
Query: 97 QPNTFMWNTLIRAQRHP----QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH 152
P T++WN LI+ + +T L MR A P ++TFP ++K CS+ + V
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN-NGQVRVG 129
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
VH VL+ G D V V Y DL AR VF E+P R+ WT +V Y ++
Sbjct: 130 SSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
EA ++F+ M E N + +++ +SG L +++ + M + + I
Sbjct: 190 GELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI----ISY 241
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
+++++ YAK G + AR LF+ +V W+ +I G A +G +A +F M + V
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY--GCMVDLLGRGGKLLE 390
P++ +G++SAC G ++ V + + HY ++D+ + G +
Sbjct: 302 -PDEFIMVGLMSACSQMGCFELCEKVDSYLHQ--RMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 391 AKELIKGMPWKPDVVILGALLE 412
A +L + MP + D+V +++E
Sbjct: 359 AAKLFEEMPQR-DLVSYCSMME 379
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 11/245 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI--RAQR-HPQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ A +F + W+ LI AQ P A ++ M P + L+
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 140 KACSSL---TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
ACS + V +H + KF +V L+ + G + A +F+E+P
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFS---SHYVVPALIDMNAKCGHMDRAAKLFEEMPQ 368
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
R L + +M+ G A + C +EA+ LFE MV EG P+ +L C +S +E G R
Sbjct: 369 RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRY 428
Query: 257 HEFMRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHG 314
E MR K + S +VN+ ++ G + A +L MP E + W ++ G + HG
Sbjct: 429 FELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
Query: 315 HVEDA 319
+ E A
Sbjct: 489 NTEIA 493
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 205/398 (51%), Gaps = 5/398 (1%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKA 141
A +F I + + W+T+I AL ++ M G P T +L+A
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQA 273
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
C++ L ++ H ++ GL + V+ LV Y +A VF IP + +
Sbjct: 274 CAA-AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS 332
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERIHEFM 260
W ++ G+ N ++ ++ F M+ E P+ + VL +C+ G LE + H ++
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYV 392
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
G + +G++LV +Y++ G++ A K+F+G+ ++ V W +I G HG AL
Sbjct: 393 IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKAL 452
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
F +M K PN+VTF+ +LSAC H GL+ G +F M Y + P +EHY +VD
Sbjct: 453 ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVD 512
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
LLGR G L A E+ K MP+ P ILG LL A + N E+A+ V +++ LE ++ G
Sbjct: 513 LLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGY 572
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++ +SN+Y GEW++V +LR ++K+ +KK SL+
Sbjct: 573 YMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 610
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 6/327 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITM-RRHGALPGKHTFPFL 138
G + A R+F + +P+ W++++ P A+ + M P + T L
Sbjct: 110 GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITL 169
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+ AC+ L+ + + + VH V++ G D + N L+ CY+ S +A +F I +
Sbjct: 170 VSACTKLSNS-RLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKD 228
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W+T++ Y QN + EAL +F M+ +G EPN AT+ VL ACA + LE G + HE
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
KG+E V + +ALV+MY K + A +F +P ++VV+W +I G +G
Sbjct: 289 LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHR 348
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
++ F M E P+ + + VL +C G L+ + F S YG + +
Sbjct: 349 SIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASL 407
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVV 405
V+L R G L A ++ G+ K VV
Sbjct: 408 VELYSRCGSLGNASKVFNGIALKDTVV 434
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 164/329 (49%), Gaps = 9/329 (2%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A ++F + + + + WNTL+++ ++ + L + M R P T P LKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 145 LTPALPVHKQVHAHVLK-FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
L + + +H V K LG D +V + L+ Y G +++A +FDE+ + W+
Sbjct: 73 LRE-VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 204 TMVCGYAQNFCSNEALALFEGMV-AEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
+MV G+ +N +A+ F MV A P+ TL +++SAC + LG +H F+
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
+G + L ++L+N YAK+ A A LF + E++V++W+ +I +G +AL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
F +M +G PN T + VL AC L+ GR + G+E +++ +VD+
Sbjct: 252 FNDMMDDGTE-PNVATVLCVLQACAAAHDLEQGRKTH-ELAIRKGLETEVKVSTALVDMY 309
Query: 383 GRGGKLLEAKELIKGMPWKPDVVILGALL 411
+ EA + +P K DVV AL+
Sbjct: 310 MKCFSPEEAYAVFSRIPRK-DVVSWVALI 337
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 173 GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP 232
G R +S S VDAR +F E+ RSL W T++ ++ E L F M + +P
Sbjct: 2 GFCRKFSSS---VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKP 58
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVG--VILGSALVNMYAKNGAIAMARK 290
+ TL L AC + GE IH F++ K V +G + +GS+L+ MY K G + A +
Sbjct: 59 DNFTLPVALKACGELREVNYGEMIHGFVK-KDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
+FD + + ++VTW+ M+ G +G A+ F M P+ VT I ++SAC
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 351 LLDVGRDV 358
+GR V
Sbjct: 178 NSRLGRCV 185
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 209/392 (53%), Gaps = 12/392 (3%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALP-GKHTFPFLL 139
++ A ++F + +PN W ++I PQ ALS++ M +P ++TF +
Sbjct: 79 EINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVF 138
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI--PSR 197
KACS+L + + K +HA + GL + V++ LV Y D+ AR VFD + R
Sbjct: 139 KACSALAES-RIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGR 197
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVA--EGFEPNGATLASVLSACARSGCLELGER 255
++ WT+M+ YAQN +EA+ LF A N LASV+SAC+ G L+ G+
Sbjct: 198 NVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKV 257
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
H + G E ++ ++L++MYAK G+++ A K+F + +V+++ MI A HG
Sbjct: 258 AHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGL 317
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
E A+ LF+ M G PN VT +GVL AC H GL++ G + M YG+ P HY
Sbjct: 318 GEAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHY 376
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWKPD--VVILGALLEASKNIGNTEVAKVVTEEILAL 433
C+VD+LGR G++ EA EL K + + ++ GALL A + G E+ ++ ++
Sbjct: 377 TCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQS 436
Query: 434 EPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
+++LSN YA +G W+D LR MK
Sbjct: 437 NQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 7/288 (2%)
Query: 112 HPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVA 171
H A SL++ ++ K T FL+ S T A +H LK G D+
Sbjct: 10 HLAPATSLFVPQYKNDFFHLK-TKAFLVHKLSESTNA-AFTNLLHTLTLKLGFASDTFTV 67
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG-F 230
N LV Y ++ AR +FDE+ ++ WT+++ GY AL++F+ M +
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
PN T ASV AC+ +G+ IH + + G+ +++ S+LV+MY K + AR+
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 291 LFDGM--PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA-VPNDVTFIGVLSACC 347
+FD M RNVV+W MI A + +A+ LF + + N V+SAC
Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACS 247
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
G L G+ V + T G E ++D+ + G L A+++
Sbjct: 248 SLGRLQWGK-VAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIF 294
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVP 334
LV Y K I ARKLFD M E NVV+W +I G G ++ALS+F+ M ++ P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 335 NDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL 394
N+ TF V AC +G+++ ++ + G+ I +VD+ G+ + A+ +
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLE-ISGLRRNIVVSSSLVDMYGKCNDVETARRV 188
Query: 395 IKGM 398
M
Sbjct: 189 FDSM 192
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 223/400 (55%), Gaps = 13/400 (3%)
Query: 90 RIFSSIHQPNTFMWNTL----IRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
R++ S + + WNT+ + A + AL+ + MR G LKACS +
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYI-GALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 146 TPALPVHKQVHAHVLK---FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
AL K H V++ F +D+ V N L+ YS DL A VF ++ + SLS W
Sbjct: 334 -GALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTW 391
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF-MR 261
+++ G+A N S E L + M+ GF PN TLAS+L AR G L+ G+ H + +R
Sbjct: 392 NSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
+ + +IL ++LV+MYAK+G I A+++FD M +R+ VT+ +I G G E AL+
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
F++M++ G+ P+ VT + VLSAC H L+ G +F M+ V+GI ++EHY CMVDL
Sbjct: 512 WFKDMDRSGIK-PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDL 570
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE-ILALEPDNHGV 440
R G L +A+++ +P++P + LL+A GNT + + ++ +L +P++ G
Sbjct: 571 YCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGH 630
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVTT 480
++ L++MYA G W ++ ++ + + ++K ++L+ T
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 106 LIRAQRHPQTALSLYITMRRHGAL---PGKHTFPF-----LLKACSSLTPALPVHKQVHA 157
L + RH + LY R L G H F LL C +P +Q+HA
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVP-GQQLHA 107
Query: 158 HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNE 217
H + GL DS + LV YS L +A+ + + W ++ Y +N E
Sbjct: 108 HCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQE 167
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
++++++ M+++G + T SV+ ACA G +H + V + + +AL++
Sbjct: 168 SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 278 MYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV 337
MY + G + +AR+LFD M ER+ V+WN +I + + +A L + M GV + V
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA-SIV 286
Query: 338 TFIGVLSACCHGG 350
T+ + C G
Sbjct: 287 TWNTIAGGCLEAG 299
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA----QRHPQTALSLYITMRRHGALPGKHTFPFL 138
DL HA +F + + WN++I +R +T+ L M G P T +
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASI 429
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVA-NGLVRCYSVSGDLVDARFVFDEIPSR 197
L + + L K+ H ++L+ D + N LV Y+ SG+++ A+ VFD + R
Sbjct: 430 LPLFARVGN-LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+T+++ GY + ALA F+ M G +P+ T+ +VLSAC+ S + G +
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 258 EFMR-VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP 296
M V G+ + + S +V++Y + G + AR +F +P
Sbjct: 549 TKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 223/400 (55%), Gaps = 13/400 (3%)
Query: 90 RIFSSIHQPNTFMWNTL----IRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSL 145
R++ S + + WNT+ + A + AL+ + MR G LKACS +
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYI-GALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 146 TPALPVHKQVHAHVLK---FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
AL K H V++ F +D+ V N L+ YS DL A VF ++ + SLS W
Sbjct: 334 -GALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTW 391
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF-MR 261
+++ G+A N S E L + M+ GF PN TLAS+L AR G L+ G+ H + +R
Sbjct: 392 NSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR 451
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
+ + +IL ++LV+MYAK+G I A+++FD M +R+ VT+ +I G G E AL+
Sbjct: 452 RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
F++M++ G+ P+ VT + VLSAC H L+ G +F M+ V+GI ++EHY CMVDL
Sbjct: 512 WFKDMDRSGIK-PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDL 570
Query: 382 LGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEE-ILALEPDNHGV 440
R G L +A+++ +P++P + LL+A GNT + + ++ +L +P++ G
Sbjct: 571 YCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGH 630
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVTT 480
++ L++MYA G W ++ ++ + + ++K ++L+ T
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 106 LIRAQRHPQTALSLYITMRRHGAL---PGKHTFPF-----LLKACSSLTPALPVHKQVHA 157
L + RH + LY R L G H F LL C +P +Q+HA
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVP-GQQLHA 107
Query: 158 HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNE 217
H + GL DS + LV YS L +A+ + + W ++ Y +N E
Sbjct: 108 HCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQE 167
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
++++++ M+++G + T SV+ ACA G +H + V + + +AL++
Sbjct: 168 SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 278 MYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV 337
MY + G + +AR+LFD M ER+ V+WN +I + + +A L + M GV + V
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA-SIV 286
Query: 338 TFIGVLSACCHGG 350
T+ + C G
Sbjct: 287 TWNTIAGGCLEAG 299
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA----QRHPQTALSLYITMRRHGALPGKHTFPFL 138
DL HA +F + + WN++I +R +T+ L M G P T +
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASI 429
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVA-NGLVRCYSVSGDLVDARFVFDEIPSR 197
L + + L K+ H ++L+ D + N LV Y+ SG+++ A+ VFD + R
Sbjct: 430 LPLFARVGN-LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+T+++ GY + ALA F+ M G +P+ T+ +VLSAC+ S + G +
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 258 EFMR-VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP 296
M V G+ + + S +V++Y + G + AR +F +P
Sbjct: 549 TKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 205/383 (53%), Gaps = 11/383 (2%)
Query: 99 NTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAH 158
N WN++I + QT+ + I + +P K L + +S+ H ++
Sbjct: 219 NLISWNSMISG--YAQTSDGVDIASKLFADMPEKD-----LISWNSMIDGYVKHGRIEDA 271
Query: 159 VLKFGLGLDSHVAN--GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSN 216
F + V ++ Y+ G + A+ +FD++P R + + +M+ GY QN
Sbjct: 272 KGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHM 331
Query: 217 EALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
EAL +F M E P+ TL VL A A+ G L +H ++ K +G LG AL
Sbjct: 332 EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVAL 391
Query: 276 VNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPN 335
++MY+K G+I A +F+G+ +++ WN MI GLA HG E A + +E+ + P+
Sbjct: 392 IDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLK-PD 450
Query: 336 DVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
D+TF+GVL+AC H GL+ G F M+ + IEP+++HYGCMVD+L R G + AK LI
Sbjct: 451 DITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLI 510
Query: 396 KGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQ 455
+ MP +P+ VI L A + E ++V + ++ N +V LSNMYA G W+
Sbjct: 511 EEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWK 570
Query: 456 DVLRLRKTMKEERLKKVPGWSLV 478
DV R+R MKE +++K+PG S +
Sbjct: 571 DVRRVRTMMKERKIEKIPGCSWI 593
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 195/453 (43%), Gaps = 68/453 (15%)
Query: 37 TLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASR-IFSSI 95
T+ VL C T + + Q+H +++ T + L +R +F
Sbjct: 15 TIHVLG-SCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEY 73
Query: 96 HQ--------PNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
H + F+WN +I++ H P+ AL L M +G K + +LKACS
Sbjct: 74 HVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSR 133
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR------- 197
L + Q+H + K GL D + N L+ Y G L +R +FD +P R
Sbjct: 134 LG-FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNS 192
Query: 198 --------------------------SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
+L W +M+ GYAQ +++ + + + A+ E
Sbjct: 193 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQ---TSDGVDIASKLFADMPE 249
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
+ + S++ + G +E + + + M + V+ + +++ YAK G + A+ L
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTL 305
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
FD MP R+VV +N M+ G + + +AL +F +MEKE +P+D T + VL A G
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYG----CMVDLLGRGGKLLEAKELIKGMPWKPD---V 404
L D+ +Y +E + G ++D+ + G + A + +G+ K
Sbjct: 366 LSKAIDMH-----LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 405 VILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
++G L A +G + ++ E L+L+PD+
Sbjct: 421 AMIGGL--AIHGLGESAFDMLLQIERLSLKPDD 451
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHG-ALPGKHTFPFL 138
G + HA +F + + +N+++ ++ AL ++ M + LP T +
Sbjct: 297 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L A + L L +H ++++ L + L+ YS G + A VF+ I ++S
Sbjct: 357 LPAIAQLG-RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 415
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W M+ G A + A + + +P+ T VL+AC+ SG ++ G E
Sbjct: 416 IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
Query: 259 FMRVK-GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHV 316
MR K +E + +V++ +++G+I +A+ L + MP E N V W + + H
Sbjct: 476 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEF 535
Query: 317 E 317
E
Sbjct: 536 E 536
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 200/391 (51%), Gaps = 8/391 (2%)
Query: 83 GDLTHASRIFSSIHQP-NTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFL 138
G ++ A ++F + Q + ++TL+ AL L+ MR+ + T
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L A S L L + H +K GL LD H+ L+ Y +G + AR +FD +
Sbjct: 234 LSAISDLGD-LSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKD 292
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W M+ YA+ E + L M E +PN +T +LS+CA S +G + +
Sbjct: 293 VVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD 352
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
+ + + + ILG+ALV+MYAK G + A ++F+ M +++V +W MI G HG +
Sbjct: 353 LLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLARE 412
Query: 319 ALSLFENMEKEGVAV-PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
A++LF ME+E V PN++TF+ VL+AC HGGL+ G F M Y PK+EHYGC
Sbjct: 413 AVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGC 472
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
+VDLLGR G+L EA ELI+ +P D ALL A + GN ++ + V + + +
Sbjct: 473 VVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETH 532
Query: 438 HGVHVSLSNMYAEAGEWQDVL--RLRKTMKE 466
+ L+ +A AG + L L K KE
Sbjct: 533 PADAILLAGTHAVAGNPEKSLDNELNKGRKE 563
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 9/318 (2%)
Query: 45 CTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWN 104
C ++ ++H MV T D D+ +AS IF + N FM+N
Sbjct: 38 CRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL---DIRYASSIFEHVSNTNLFMFN 94
Query: 105 TLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLK 161
T+IR P+ A S++ +R G + +F LK+CS + + + +H L+
Sbjct: 95 TMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR-ELCVSIGEGLHGIALR 153
Query: 162 FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP-SRSLSLWTTMVCGYAQNFCSNEALA 220
G + + + N L+ Y V G + DAR VFDE+P S ++T++ GY Q AL
Sbjct: 154 SGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALD 213
Query: 221 LFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYA 280
LF M N +TL S LSA + G L E H G+++ + L +AL+ MY
Sbjct: 214 LFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYG 273
Query: 281 KNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFI 340
K G I+ AR++FD ++VVTWN MI A G +E+ + L M+ E + PN TF+
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK-PNSSTFV 332
Query: 341 GVLSACCHGGLLDVGRDV 358
G+LS+C + VGR V
Sbjct: 333 GLLSSCAYSEAAFVGRTV 350
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 50/363 (13%)
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
++H +++K GL D + L+ SV D+ A +F+ + + +L ++ TM+ GY+ +
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFSSVL-DIRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
A ++F + A+G + + + L +C+R C+ +GE +H G V L +
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 274 ALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
AL++ Y G I+ ARK+FD MP+ + VT++ ++ G AL LF M K V
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV 224
Query: 333 VPNDVTFIGVLSA----------------CCHGGLLDVGRDVFCSMKTVYG--------- 367
V N T + LSA C G LD+ + ++ +YG
Sbjct: 225 V-NVSTLLSFLSAISDLGDLSGAESAHVLCIKIG-LDLDLHLITALIGMYGKTGGISSAR 282
Query: 368 ------IEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW---KPDVVILGALLEA----- 413
I + + CM+D + G L E L++ M + KP+ LL +
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 414 SKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVP 473
+ +G T VA ++ EE +AL+ + +L +MYA+ G + + + MK+ K V
Sbjct: 343 AAFVGRT-VADLLEEERIALDAI---LGTALVDMYAKVGLLEKAVEIFNRMKD---KDVK 395
Query: 474 GWS 476
W+
Sbjct: 396 SWT 398
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 181/323 (56%), Gaps = 4/323 (1%)
Query: 156 HAHVLKFGLGLDSHVA--NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
+AH + GL + N L+ Y SG DA+ +F E+ + L+ W+ MV YA++
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESC 547
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
C NEA+ +F + A G PN T+ ++L CA+ L L + H ++ ++G + L
Sbjct: 548 CPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI-IRGGLGDIRLKG 606
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
L+++YAK G++ A +F R++V + M+ G A HG ++AL ++ +M + +
Sbjct: 607 TLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIK- 665
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
P+ V +L+ACCH GL+ G ++ S++TV+G++P +E Y C VDL+ RGG+L +A
Sbjct: 666 PDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYS 725
Query: 394 LIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGE 453
+ MP +P+ I G LL A ++ V +L E D+ G HV +SNMYA +
Sbjct: 726 FVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAK 785
Query: 454 WQDVLRLRKTMKEERLKKVPGWS 476
W+ V+ LR MK++ +KK G S
Sbjct: 786 WEGVMELRNLMKKKEMKKPAGCS 808
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 23/284 (8%)
Query: 90 RIFSSIHQPNTFMWNTLIRAQRHPQTALSLYI---TMRRHGAL-------PGKHTFPFLL 139
++F + + +WN ++ T LS+ TMR A+ P TF +L
Sbjct: 77 KMFRQMDSLDPVVWNIVL-------TGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVL 129
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLV-DARFVFDEIPSRS 198
C L + K +H++++K GL D+ V N LV Y+ G + DA FD I +
Sbjct: 130 PLCVRLGDSYN-GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA---RSGCLELGER 255
+ W ++ G+++N +A F M+ E EPN AT+A+VL CA ++ G +
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 256 IHEFMRVKG-VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
IH ++ + ++ V + ++LV+ Y + G I A LF M +++V+WN +I G A++
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
A LF N+ +G P+ VT I +L C L G+++
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 5/214 (2%)
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
F ++KAC+S++ L + +H V K G S V+ ++ Y+ + D + +F ++
Sbjct: 24 FLDVVKACASVSD-LTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGM-VAEGFEPNGATLASVLSACARSGCLELG 253
S +W ++ G + + C E + F+ M A+ +P+ T A VL C R G G
Sbjct: 83 DSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAI-AMARKLFDGMPERNVVTWNGMICGLAT 312
+ +H ++ G+E ++G+ALV+MYAK G I A FDG+ +++VV+WN +I G +
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
+ + DA F M KE PN T VL C
Sbjct: 202 NNMMADAFRSFCLMLKEPTE-PNYATIANVLPVC 234
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 190/467 (40%), Gaps = 53/467 (11%)
Query: 43 DKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFM 102
DK +Q+H+ +V + H G + A+ +F+ + +
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRV-GRIEEAASLFTRMGSKDLVS 296
Query: 103 WNTLIRAQRHP---QTALSLYITMRRHGAL-PGKHTFPFLLKACSSLTPALPVHKQVHAH 158
WN +I A L+ + G + P T +L C+ LT L K++H++
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTD-LASGKEIHSY 355
Query: 159 VLKFGLGL-DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNE 217
+L+ L D+ V N L+ Y+ GD A + F + ++ + W ++ +A + +
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ 415
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV---EVGVILGSA 274
L L ++ E + T+ S+L C + + +H + G+ E LG+A
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475
Query: 275 LVNMYAKNGAIAMARKLFDGMPE-RNVVTWNGMICGLATHGHVEDALSLFENME------ 327
L++ YAK G + A K+F G+ E R +V++N ++ G G +DA LF M
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 328 --------------KEGVAV----------PNDVTFIGVLSACCHGGLLDVGRDVFCSMK 363
E + V PN VT + +L C L + R C
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQ--CHGY 593
Query: 364 TVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
+ G I G ++D+ + G L A + + + D+V+ A++ G + A
Sbjct: 594 IIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEA 652
Query: 424 KVVTEEILA--LEPDNHGVHVSLSNMYA---EAGEWQDVLRLRKTMK 465
++ + ++PD HV ++ M AG QD L++ +++
Sbjct: 653 LMIYSHMTESNIKPD----HVFITTMLTACCHAGLIQDGLQIYDSIR 695
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 213/399 (53%), Gaps = 6/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR--AQRHPQ-TALSLYITMRRHGALPGKHTFPFLL 139
G + A +F + + + W T++ AQ A+ Y M+ G + LL
Sbjct: 165 GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLL 224
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+A L + + VH ++ + GL ++ V LV Y+ G + A VF + ++
Sbjct: 225 QASGDLGDT-KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTA 283
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +++ G+AQN +N+A M + GF+P+ TL VL AC++ G L+ G +H +
Sbjct: 284 VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY 343
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ + V + + +AL++MY+K GA++ +R++F+ + +++V WN MI HG+ ++
Sbjct: 344 ILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEV 402
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+SLF M + + P+ TF +LSA H GL++ G+ F M Y I+P +HY C++
Sbjct: 403 VSLFLKMTESNIE-PDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLI 461
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLL R G++ EA ++I + I ALL N N V + +IL L PD+ G
Sbjct: 462 DLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIG 521
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ +SN +A A +W++V ++RK M+ ++KVPG+S +
Sbjct: 522 IQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAI 560
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 179/375 (47%), Gaps = 11/375 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLL 139
G++++A ++F + Q ++N++I ++P L LY M P TF +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
KAC S L + V + FG D V + ++ Y G + +A +F ++ R +
Sbjct: 124 KACLS-GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDV 182
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WTTMV G+AQ S +A+ + M EGF + + +L A G ++G +H +
Sbjct: 183 ICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGY 242
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G+ + V++ ++LV+MYAK G I +A ++F M + V+W +I G A +G A
Sbjct: 243 LYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA 302
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
M+ G P+ VT +GVL AC G L GR V C + + ++ ++
Sbjct: 303 FEAVVEMQSLGFQ-PDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALM 359
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN-TEVAKVVTEEILA-LEPDN 437
D+ + G L ++E+ + + + D+V ++ GN EV + + + +EPD
Sbjct: 360 DMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPD- 417
Query: 438 HGVHVSLSNMYAEAG 452
H SL + + +G
Sbjct: 418 HATFASLLSALSHSG 432
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 14/308 (4%)
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLD-SHVANGLVRCYSVSGDLVDARFVFDEI 194
P +K S++ Q+HA V+ G L+ S ++ L+ G++ AR VFDE+
Sbjct: 17 PKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDEL 76
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
P R +S++ +M+ Y++ +E L L++ M+AE +P+ +T + AC LE GE
Sbjct: 77 PQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
Query: 255 RIHEFMRVKGVEVG----VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGL 310
+ K V+ G V + S+++N+Y K G + A LF M +R+V+ W M+ G
Sbjct: 137 AVW----CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGF 192
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
A G A+ + M+ EG + V +G+L A G +GR V + G+
Sbjct: 193 AQAGKSLKAVEFYREMQNEGFG-RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT-GLPM 250
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE--ASKNIGNTEVAKVVTE 428
+ +VD+ + G + A + M +K V G+L+ A + N VV
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKT-AVSWGSLISGFAQNGLANKAFEAVVEM 309
Query: 429 EILALEPD 436
+ L +PD
Sbjct: 310 QSLGFQPD 317
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 201/400 (50%), Gaps = 13/400 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKH-----TFPF 137
G + A R+F ++ + +WN L+ + + ++ G+ + TF
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS 250
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
LL AC + KQ+HA + K D VA L+ Y+ S L DAR F+ + R
Sbjct: 251 LLSACR-----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR 305
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
++ W M+ G+AQN EA+ LF M+ E +P+ T ASVLS+CA+ + +++
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQ 365
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ KG + + ++L++ Y++NG ++ A F + E ++V+W +I LA+HG E
Sbjct: 366 AMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAE 425
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
++L +FE+M ++ P+ +TF+ VLSAC HGGL+ G F M Y IE + EHY C
Sbjct: 426 ESLQMFESMLQK--LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
++DLLGR G + EA +++ MP +P L A E K +++L +EP
Sbjct: 484 LIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTK 543
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK-KVPGWS 476
+ LSN Y G W LRK + K PG S
Sbjct: 544 PVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 142/311 (45%), Gaps = 14/311 (4%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQ- 211
KQ H ++K G+ + N L++ Y+ + DA +FDE+P R++ W ++ G Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 212 ----NFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
N ++ ++ + + ++ C S ++ G ++H M +G+E
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENME 327
++LV+ Y K G I AR++F+ + +R++V WN ++ +G +++A L + M
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 328 KEGVAVPND-VTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCMVDLLGRG 385
+ D TF +LSAC ++ G+ + + K Y + + ++++ +
Sbjct: 236 SDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVA--TALLNMYAKS 289
Query: 386 GKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILA-LEPDNHGVHVSL 444
L +A+E + M + V ++ ++N E ++ + +L L+PD L
Sbjct: 290 NHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVL 349
Query: 445 SNMYAEAGEWQ 455
S+ + W+
Sbjct: 350 SSCAKFSAIWE 360
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 214/406 (52%), Gaps = 15/406 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHG--ALPGKHTFPF 137
G + A ++F I + WN +I H AL + M+ P + T
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSH--VANGLVRCYSVSGDLVDARFVFDEIP 195
LLKACSS T + KQ+H +++ G S + LV Y G L AR FD+I
Sbjct: 216 LLKACSS-TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
+++ W++++ GYAQ EA+ LF+ + + + L+S++ A L G++
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 256 IHEFMRVK---GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
+ + + VK G+E V+ +++V+MY K G + A K F M ++V++W +I G
Sbjct: 335 M-QALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
HG + ++ +F M + + P++V ++ VLSAC H G++ G ++F + +GI+P++
Sbjct: 392 HGLGKKSVRIFYEMLRHNIE-PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILA 432
EHY C+VDLLGR G+L EAK LI MP KP+V I LL + G+ E+ K V + +L
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 510
Query: 433 LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++ N +V +SN+Y +AG W + R+ + LKK G S V
Sbjct: 511 IDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 128/250 (51%), Gaps = 12/250 (4%)
Query: 88 ASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
A ++F S+ + N W+ L+ + +LSL+ M R G P + TF LKAC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACG- 118
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
L AL Q+H LK G + V N LV YS G + +A VF I RSL W
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGF---EPNGATLASVLSACARSGCLELGERIHEFMR 261
M+ G+ ++AL F GM+ E P+ TL S+L AC+ +G + G++IH F+
Sbjct: 179 MIAGFVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 262 VKGVEV---GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
G I GS LV++Y K G + ARK FD + E+ +++W+ +I G A G +
Sbjct: 238 RSGFHCPSSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 319 ALSLFENMEK 328
A+ LF+ +++
Sbjct: 297 AMGLFKRLQE 306
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 128/242 (52%), Gaps = 2/242 (0%)
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
QVH ++LK G GL+ +N L+ Y + + A VFD +P R++ W+ ++ G+ N
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
+L+LF M +G PN T ++ L AC LE G +IH F G E+ V +G+
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA- 332
+LV+MY+K G I A K+F + +R++++WN MI G G+ AL F M++ +
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
P++ T +L AC G++ G+ + + ++ + G +VDL + G L A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 392 KE 393
++
Sbjct: 267 RK 268
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 7/168 (4%)
Query: 232 PNG-ATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
PN L S+L C R G + G ++H ++ G + +I + L++MY K MA K
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
+FD MPERNVV+W+ ++ G +G ++ +LSLF M ++G+ PN+ TF L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI-YPNEFTFSTNLKACGLLN 121
Query: 351 LLDVGRDV--FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
L+ G + FC G E +E +VD+ + G++ EA+++ +
Sbjct: 122 ALEKGLQIHGFC---LKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 205/395 (51%), Gaps = 6/395 (1%)
Query: 87 HASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKACS 143
+ R F +H + W T+I AL L+ + + + +L+A S
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
L L V K++H H+L+ GL LD+ + N LV Y ++ A VF+ I + + WT
Sbjct: 499 VLKSMLIV-KEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
+M+ A N +EA+ LF MV G + L +LSA A L G IH ++ K
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G + + A+V+MYA G + A+ +FD + + ++ + MI HG + A+ LF
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
+ M E V+ P+ ++F+ +L AC H GLLD GR M+ Y +EP EHY C+VD+LG
Sbjct: 677 DKMRHENVS-PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLG 735
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVS 443
R ++EA E +K M +P + ALL A ++ E+ ++ + +L LEP N G V
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795
Query: 444 LSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+SN++AE G W DV ++R MK ++K PG S +
Sbjct: 796 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 11/328 (3%)
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKF--GLGLDSHVANGLVRCYSVSGDLVDARFVFD 192
F ++L+ C A+ +Q+H+ + K LD +A LV Y G L DA VFD
Sbjct: 83 FAYVLELCGK-RRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 193 EIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL 252
E+P R+ W TM+ Y N ALAL+ M EG ++ ++L ACA+ +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-NVVTWNGMICGLA 311
G +H + G + +ALV+MYAKN ++ AR+LFDG E+ + V WN ++ +
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
T G + L LF M G A PN T + L+AC +G+++ S+ +
Sbjct: 261 TSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 372 IEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEAS-KNIGNTEVAKVVTEEI 430
+ ++ + R GK+ +A+ +++ M DVV +L++ +N+ E + ++ I
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 431 LALEPDNHGVHVSLSNMYAEAGEWQDVL 458
A + VS++++ A +G ++L
Sbjct: 379 AAGHKSD---EVSMTSIIAASGRLSNLL 403
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 7/268 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G L A ++F + F WNT+I A P +AL+LY MR G G +FP LL
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
KAC+ L + ++H+ ++K G + N LV Y+ + DL AR +FD +
Sbjct: 190 KACAKLRD-IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 200 S-LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH- 257
+ LW +++ Y+ + S E L LF M G PN T+ S L+AC +LG+ IH
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
++ + + +AL+ MY + G + A ++ M +VVTWN +I G + +
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 368
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSA 345
+AL F +M G ++V+ +++A
Sbjct: 369 EALEFFSDMIAAGHK-SDEVSMTSIIAA 395
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 169/346 (48%), Gaps = 12/346 (3%)
Query: 84 DLTHASRIFSSIHQP-NTFMWNTLIRAQRHPQTALS---LYITMRRHGALPGKHTFPFLL 139
DL+ A R+F + + +WN+++ + +L L+ M G P +T L
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 140 KACSSLTPALPVHKQVHAHVLKFGL-GLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
AC + A + K++HA VLK + +V N L+ Y+ G + A + ++ +
Sbjct: 292 TACDGFSYA-KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNAD 350
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W +++ GY QN EAL F M+A G + + ++ S+++A R L G +H
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA 410
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG-HVE 317
++ G + + +G+ L++MY+K + F M ++++++W +I G A + HVE
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVE 470
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
AL LF ++ K+ + + +++ +L A + + +++ C + ++ I++
Sbjct: 471 -ALELFRDVAKKRMEI-DEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-- 526
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
+VD+ G+ + A + + + K DVV +++ +S GN A
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGNESEA 571
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 200/388 (51%), Gaps = 6/388 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR--AQRHPQTALSLYITMRRHGALP-GKHTFPFLL 139
G L A R+++S Q + +++ A++ +Y + R + +L
Sbjct: 295 GCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGIL 354
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C + + + +H + +K GL + V NGL+ YS D+ F+F+++ L
Sbjct: 355 HGCKK-SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPL 413
Query: 200 SLWTTMVCGYAQNFCSNEALALF-EGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
W +++ G Q+ ++ A +F + M+ G P+ T+AS+L+ C++ CL LG+ +H
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
+ E + +AL++MYAK G A +F + TWN MI G + G
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHR 533
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
ALS + M ++G+ P+++TF+GVLSAC HGG +D G+ F +M +GI P ++HY M
Sbjct: 534 ALSCYLEMREKGLK-PDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALM 592
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
V LLGR EA LI M KPD + GALL A EV + V ++ L+ N
Sbjct: 593 VGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNG 652
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
G++V +SN+YA W DV+R+R MK+
Sbjct: 653 GLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 133/247 (53%), Gaps = 5/247 (2%)
Query: 103 WNTLIRAQRHPQTA---LSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH-KQVHAH 158
+++L+++ H + + ++++ + R P T L+A ++ + + +QV H
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH 75
Query: 159 VLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEA 218
+ K GL +V L+ Y G + A+ +FDE+P R +W ++CGY++N +A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 219 LALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNM 278
LF M+ +GF P+ TL ++L C + G + G +H G+E+ + +AL++
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 279 YAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVT 338
Y+K + A LF M +++ V+WN MI + G E+A+++F+NM ++ V + + VT
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI-SPVT 254
Query: 339 FIGVLSA 345
I +LSA
Sbjct: 255 IINLLSA 261
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 141/323 (43%), Gaps = 19/323 (5%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
+L A +F + +T WNT+I A + A++++ M T LL
Sbjct: 200 AELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL 259
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
A S H+ +H V+K G+ D V LV YS G LV A ++ S+
Sbjct: 260 SAHVS-------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSI 312
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
T++V YA+ + A+ F + + L +L C +S +++G +H +
Sbjct: 313 VGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGY 372
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
G+ ++ + L+ MY+K + LF+ + E +++WN +I G G A
Sbjct: 373 AIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI--EHYGC 377
+F M G +P+ +T +L+ C L++G+++ Y + E++ C
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH-----GYTLRNNFENENFVC 487
Query: 378 --MVDLLGRGGKLLEAKELIKGM 398
++D+ + G ++A+ + K +
Sbjct: 488 TALIDMYAKCGNEVQAESVFKSI 510
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 221/472 (46%), Gaps = 77/472 (16%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRH--GALPGKHTFPF 137
GD+ A R+F + + N W +I + AL L++ M++ P T
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 138 LLKACSSLTPALP-VHKQVHAHVLKFG---LGLDSHVANGLVRCYSVSG----------- 182
L AC L + +Q+HA V+ G + D +A LV Y+ SG
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 183 ------------------DLVDARFVFDEIPS---------------------RSLSL-- 201
DL A +F+ + S R+ L
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 202 ---------WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL 252
WT M+ G QN EA +L MV G +P +T + +LS+ + L+
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 253 GERIHEFM--RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGL 310
G+ IH + + +IL ++LV+MYAK GAI A ++F M +++ V+WN MI GL
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
+ HG + AL+LF+ M G PN VTF+GVLSAC H GL+ G ++F +MK Y I+P
Sbjct: 545 SHHGLADKALNLFKEMLDSGKK-PNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEAS----KNIGNTEVAKVV 426
I+HY M+DLLGR GKL EA+E I +P+ PD + GALL ++ +A+
Sbjct: 604 GIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERA 663
Query: 427 TEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+L L+P N HV+L N+YA G +RK M + +KK PG S V
Sbjct: 664 AMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 170/405 (41%), Gaps = 44/405 (10%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRR----HGALPGKHTFPFL 138
G A +F + + N WNTL+ T L M + A+P + +
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLV-------TGLIRNGDMEKAKQVFDAMPSRDVVSW- 203
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVAN--GLVRCYSVSGDLVDARFVFDEIPS 196
+++ + + L FG + +V +V Y GD+ +A +F E+P
Sbjct: 204 ----NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE 259
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMV--AEGFEPNGATLASVLSACARSGC--LEL 252
R++ WT M+ G+A N EAL LF M + PNG TL S+ AC G L
Sbjct: 260 RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRL 319
Query: 253 GERIHEFMRVKGVEV---GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
GE++H + G E L +LV+MYA +G IA A+ L + ++ + N +I
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINR 377
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
+G +E A +LFE ++ ++ + V++ ++ G + +F + G+
Sbjct: 378 YLKNGDLERAETLFERVK----SLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT 433
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAK-- 424
+ M+ L + EA L+ M KP LL ++ N + K
Sbjct: 434 -----WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Query: 425 --VVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
V+ + +PD + SL +MYA+ G +D + M ++
Sbjct: 489 HCVIAKTTACYDPD-LILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPN 233
L+ Y+ +G L +AR +F+ +P R++ M+ GY + NEA LF M N
Sbjct: 83 LLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKN 137
Query: 234 GATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFD 293
+ +L+A G E + + M E V+ + LV +NG + A+++FD
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 294 GMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLD 353
MP R+VV+WN MI G + +E+A LF +M ++ V VT+ ++ C G +
Sbjct: 194 AMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV-----VTWTSMVYGYCRYGDVR 248
Query: 354 VGRDVFCSM 362
+FC M
Sbjct: 249 EAYRLFCEM 257
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 182 GDLVDARFVFDEIPSRS----LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATL 237
G LV AR + D+IP R + WT+++ YA+ +EA LFE M E N T
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP----ERNIVTC 111
Query: 238 ASVLSACARSGCLELGERIHEFMRV-KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP 296
++L+ + C + E F + K V ++ +AL + +G A +LFD MP
Sbjct: 112 NAMLTGYVK--CRRMNEAWTLFREMPKNVVSWTVMLTALCD----DGRSEDAVELFDEMP 165
Query: 297 ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
ERNVV+WN ++ GL +G +E A +F+ M V V++ ++ ++ +
Sbjct: 166 ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV-----VSWNAMIKGYIENDGMEEAK 220
Query: 357 DVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP 399
+F M E + + MV R G + EA L MP
Sbjct: 221 LLFGDMS-----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
V+ ++L++ YAK G + AR LF+ MPERN+VT N M+ G + +A +LF M K
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK 136
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKL 388
N V++ +L+A C G + ++F M E + + +V L R G +
Sbjct: 137 ------NVVSWTVMLTALCDDGRSEDAVELFDEMP-----ERNVVSWNTLVTGLIRNGDM 185
Query: 389 LEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMY 448
+AK++ MP + DVV A+++ E AK++ + + N S+ Y
Sbjct: 186 EKAKQVFDAMPSR-DVVSWNAMIKGYIENDGMEEAKLLFGD---MSEKNVVTWTSMVYGY 241
Query: 449 AEAGEWQDVLRLRKTMKEERL 469
G+ ++ RL M E +
Sbjct: 242 CRYGDVREAYRLFCEMPERNI 262
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 215/462 (46%), Gaps = 68/462 (14%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALP-GKHTFPFL 138
G + A +F + + N W +I + L++ MR+ G + +T +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFV-------- 190
KAC Q+H V + L D + N L+ YS G + +A+ V
Sbjct: 282 FKACRDFVRYRE-GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 191 -----------------------FDEIPSRSLSLWTTMVCGYA----------------- 210
F+++P + + WT M+ G++
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 211 ----------QNFCSN----EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
F SN EAL F M+ + PN T +SVLSA A L G +I
Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H + + + + ++LV+MY K G A K+F + E N+V++N MI G + +G
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
+ AL LF +E G PN VTF+ +LSAC H G +D+G F SMK+ Y IEP +HY
Sbjct: 521 KKALKLFSMLESSGKE-PNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
CMVDLLGR G L +A LI MP KP + G+LL ASK ++A++ ++++ LEPD
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ +V LS +Y+ G+ +D R+ K +R+KK PG S +
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 27/306 (8%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG-F 230
+ +V Y G +VDAR +FD + R++ WT M+ GY + + LF M EG
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
+ N TLA + AC G +IH + +E + LG++L++MY+K G + A+
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 291 LFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV----TFIGVLSAC 346
+F M ++ V+WN +I GL + +A LFE M + + D+ + G +S C
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEH--YGCMVDLLGRGGKLLEAKELIKGMPWK--- 401
++G+ P+ ++ + M+ G EA M K
Sbjct: 392 VE----------------LFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 402 PDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH-GVHVSLSNMYAEAGEWQDVLRL 460
P+ ++L A+ ++ + + ++ + N V SL +MY + G D ++
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 461 RKTMKE 466
+ E
Sbjct: 496 FSCISE 501
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 148/347 (42%), Gaps = 70/347 (20%)
Query: 173 GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS-NEALALFEGMVAEGFE 231
++ Y+ +G + A VFDE+P R + + M+ +N C +A LF + E
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP----E 141
Query: 232 PNGATLASVLSACARSGCLELGERIH---------------------------EFMRV-K 263
N + A++++ R+G + E ++ E +RV +
Sbjct: 142 KNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQ 201
Query: 264 GVEVG-VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
G+ V V+ S++V+ Y K G I AR LFD M ERNV+TW MI G G ED L
Sbjct: 202 GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 323 FENMEKEGVAVPNDVTFIGVLSAC-----------CHG--GLLDVGRDVFC-----SM-- 362
F M +EG N T + AC HG + + D+F SM
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 363 --------KTVYGIEPKIE--HYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLE 412
K V+G+ + + ++ L + ++ EA EL + MP K D+V +++
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK-DMVSWTDMIK 380
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVH-VSLSNMYAEAGEWQDVL 458
G E++K V E+ + P+ + ++ + + G +++ L
Sbjct: 381 GFS--GKGEISKCV--ELFGMMPEKDNITWTAMISAFVSNGYYEEAL 423
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 217/456 (47%), Gaps = 17/456 (3%)
Query: 34 DPP--TLAVLADKCTTVEQL---KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHA 88
DP T +++ + C+ + K +HA+++V+ D GD+ A
Sbjct: 297 DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD--LPLDNALLDMYCSCGDMREA 354
Query: 89 SRIFSSIHQPNTFMWNTLIRAQRH----PQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
+F IH PN WN++I Q L +R P ++TF + A +
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Query: 145 LTPALPVH-KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWT 203
P VH K +H V K G V L+ Y + + A+ VFD + R + LWT
Sbjct: 415 --PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWT 472
Query: 204 TMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
M+ G+++ S A+ F M E +G +L+SV+ AC+ L GE H
Sbjct: 473 EMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT 532
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
G + + + ALV+MY KNG A +F ++ WN M+ + HG VE ALS F
Sbjct: 533 GFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFF 592
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
E + + G +P+ VT++ +L+AC H G G+ ++ MK GI+ +HY CMV+L+
Sbjct: 593 EQILENGF-MPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVS 650
Query: 384 RGGKLLEAKELI-KGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHV 442
+ G + EA ELI + P + LL A N N ++ E+IL L+P++ H+
Sbjct: 651 KAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHI 710
Query: 443 SLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LSN+YA G W+DV +R+ ++ K PG S +
Sbjct: 711 LLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWI 746
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 176/399 (44%), Gaps = 27/399 (6%)
Query: 41 LADKCTTVEQLK---QVHAQMVVTARFN--DHXXXXXXXXXXXXXXXGDLTHASRIFSSI 95
L KC ++ LK Q+HA +V+TA G L A ++F +
Sbjct: 100 LTRKCVSITVLKRARQIHA-LVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKM 158
Query: 96 HQPNTFMWNTLIRA-QRHPQTALSLYITMRRHGAL----PGKHTFPFLLKACSSLTPALP 150
N +N L A R+P A S + H A P TF L++ C+ L L
Sbjct: 159 PHRNVVSYNALYSAYSRNPDFA-SYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVL- 216
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYA 210
+ +++ ++K G + V ++ YS GDL AR +FD + +R W TM+ G
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI 270
+N + L F M+ G +P T + VL+ C++ G LG+ IH + V +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
L +AL++MY G + A +F + N+V+WN +I G + +G E A+ ++ + +
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 331 VAVPNDVTFIGVLSACC------HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
P++ TF +SA HG LL T G E + ++ + +
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLH-------GQVTKLGYERSVFVGTTLLSMYFK 449
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
+ A+++ M + DVV+ ++ +GN+E+A
Sbjct: 450 NREAESAQKVFDVMKER-DVVLWTEMIVGHSRLGNSELA 487
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 11/188 (5%)
Query: 169 HVANGLVRCYSVSGDLVDARFVFDEIPSRSLS--LWTTMVCGYAQNFCSNEA----LALF 222
+ N L+ Y L AR VFD++P R++ + V Y S + L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 223 EGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV---ILGSALVNMY 279
+ + +++ + C L+ +IH + G + L++MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 280 AKNGAIAMARKLFDGMPERNVVTWNGMICGLATH-GHVEDALSLFENMEKEGVAVPNDVT 338
+ G++ ARK+FD MP RNVV++N + + + A L +M E V PN T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK-PNSST 201
Query: 339 FIGVLSAC 346
F ++ C
Sbjct: 202 FTSLVQVC 209
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 202/406 (49%), Gaps = 15/406 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G + A +F + + + W +I + AL L M+ G P T L+
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
Query: 140 KACSSLTPALPVH--KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF-VFDEIPS 196
C AL V+ K +H ++ + D + L+ Y+ VD F VF
Sbjct: 327 SVCGD---ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA-KCKRVDLCFRVFSGASK 382
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
W+ ++ G QN ++AL LF+ M E EPN ATL S+L A A L I
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNI 442
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLAT 312
H ++ G + + LV++Y+K G + A K+F+G+ E+ +VV W +I G
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
HG +AL +F M + GV PN++TF L+AC H GL++ G +F M Y +
Sbjct: 503 HGDGHNALQVFMEMVRSGVT-PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS 561
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILA 432
HY C+VDLLGR G+L EA LI +P++P + GALL A N ++ ++ ++
Sbjct: 562 NHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFE 621
Query: 433 LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LEP+N G +V L+N+YA G W+D+ ++R M+ L+K PG S +
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 10/305 (3%)
Query: 47 TVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTL 106
++ + K +H ++ R + H G +T+A ++F + Q + +N +
Sbjct: 30 SISKTKALHCHVITGGRVSGHILSTLSVTYALC---GHITYARKLFEEMPQSSLLSYNIV 86
Query: 107 IRAQRHP---QTALSLYITMRRHGA--LPGKHTFPFLLKACSSLTPALPVHKQVHAHVLK 161
IR A+S++I M G +P +T+PF+ KA L ++ + VH +L+
Sbjct: 87 IRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL-KSMKLGLVVHGRILR 145
Query: 162 FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALAL 221
G D +V N L+ Y G + AR VFD + +R + W TM+ GY +N N+AL +
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 222 FEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK 281
F+ MV E + + AT+ S+L C LE+G +H+ + K + + + +ALVNMY K
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK 265
Query: 282 NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIG 341
G + AR +FD M R+V+TW MI G G VE+AL L M+ EGV PN VT
Sbjct: 266 CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR-PNAVTIAS 324
Query: 342 VLSAC 346
++S C
Sbjct: 325 LVSVC 329
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 154/335 (45%), Gaps = 9/335 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A +F + + WNT+I + AL ++ M T +L
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML 225
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C L L + + VH V + LG V N LV Y G + +ARFVFD + R +
Sbjct: 226 PVCGHLKD-LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDV 284
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT M+ GY ++ AL L M EG PN T+AS++S C + + G+ +H +
Sbjct: 285 ITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGW 344
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ V +I+ ++L++MYAK + + ++F G + + W+ +I G + V DA
Sbjct: 345 AVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDA 404
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L LF+ M +E V PN T +L A L ++ C + T G ++ +V
Sbjct: 405 LGLFKRMRREDVE-PNIATLNSLLPAYAALADLRQAMNIHCYL-TKTGFMSSLDAATGLV 462
Query: 380 DLLGRGGKLLEAKELIKGMPWK---PDVVILGALL 411
+ + G L A ++ G+ K DVV+ GAL+
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 229/443 (51%), Gaps = 58/443 (13%)
Query: 92 FSSIHQPNT----FMWNTLIRAQ---RHPQTALSLYITMRR-------HGALP--GKHTF 135
F +HQ F++N L+R P A LY ++R + +LP T+
Sbjct: 65 FLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTY 124
Query: 136 PFLLKACSSLTPALP-VHKQVHAHVLKFGLGLDSHV--ANGLVRCYSVSGDLVDARFVFD 192
FLLKA S+ P P + + H L LG +SHV LV Y V G+++DA VFD
Sbjct: 125 LFLLKASSN--PRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFD 182
Query: 193 EIP-------------------------------SRSLSLWTTMVCGYAQNFCSNEALAL 221
E+P +R++ WTT++ GYA+ EA+ L
Sbjct: 183 EMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILL 242
Query: 222 FEGMVA-EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG-VEVGVILGSALVNMY 279
F MVA + +PN T+ ++L A G L++ +H ++ +G V + + ++L++ Y
Sbjct: 243 FSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAY 302
Query: 280 AKNGAIAMARKLFDGMP--ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDV 337
AK G I A K F +P +N+V+W MI A HG ++A+S+F++ME+ G+ PN V
Sbjct: 303 AKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLK-PNRV 361
Query: 338 TFIGVLSACCHGGLLDVG-RDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
T I VL+AC HGGL + + F +M Y I P ++HYGC+VD+L R G+L EA+++
Sbjct: 362 TMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIAL 421
Query: 397 GMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQD 456
+P + V+ LL A + E+A+ VT +++ LE + G +V +SN++ G + D
Sbjct: 422 EIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLD 481
Query: 457 VLRLRKTMKEERLKKVPGWSLVT 479
R RK M + K+PG S VT
Sbjct: 482 AQRFRKQMDVRGVAKLPGHSQVT 504
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 196/402 (48%), Gaps = 11/402 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFM-WNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFL 138
GDLT A ++ + WN++I + H +L + M R G + +H L
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKI--RHDLITL 584
Query: 139 LKACS-SLTPALPVHKQ-VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
L S S L + + H +K LD+ + N L+ Y D+ A VF I
Sbjct: 585 LGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
+L W ++ +QN E LF + EPN T +LSA + G G +
Sbjct: 645 PNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQA 701
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H + +G + + +ALV+MY+ G + K+F ++ WN +I HG
Sbjct: 702 HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMG 761
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
E A+ LF+ + PN +FI +LSAC H G +D G + M+ +G++P EH
Sbjct: 762 EKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRV 821
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
+VD+LGR GKL EA E I G+ + GALL A G+T++ K V E + +EPD
Sbjct: 822 WIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPD 881
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
N ++SL+N Y G W++ +RLRK +++ LKK+PG+S++
Sbjct: 882 NASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 13/292 (4%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
+L+ A +F+ + + WNT++ A HP+ +L + +M G TF ++
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVA--NGLVRCYSVSGDLVDARFVFDEIPSRS 198
ACSS+ L + + +H V+K G ++HV+ N ++ YS GD A VF+E+ R
Sbjct: 298 ACSSI-EELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACARSGCLELGERIH 257
+ ++ G+A N EA + M + + +P+ AT+ S+ S C G +H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 258 EF---MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
+ M ++ + VI +++++MY K G A LF R++V+WN MI + +G
Sbjct: 417 GYTVRMEMQSRALEVI--NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 315 HVEDALSLFENMEKEGVAVPNDV-TFIGVLSACCHGGLLDVGRDVFCSMKTV 365
A +LF+ + E + T + +L++C L G+ V C ++ +
Sbjct: 475 FTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL 526
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 161/364 (44%), Gaps = 25/364 (6%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHG---------ALP 130
G+L +S +F + + + +WN++I A A+ L+I M G
Sbjct: 136 GELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAA 195
Query: 131 GKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFV 190
+ L + CS L H ++ GL DS + N L+ Y+ +L A V
Sbjct: 196 SALSSLHLSRKCSML----------HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECV 245
Query: 191 FDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL 250
F + R + W T++ N ++L F+ M G E + T + V+SAC+ L
Sbjct: 246 FTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEEL 305
Query: 251 ELGERIHEFMRVKGV--EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMIC 308
LGE +H + G E V +G+++++MY+K G A +F+ + R+V++ N ++
Sbjct: 306 TLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 309 GLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGI 368
G A +G E+A + M+ P+ T + + S C GR V +
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 369 EPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE 428
+E ++D+ G+ G +A+ L K + D+V +++ A G T AK + +
Sbjct: 426 SRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWNSMISAFSQNGFTHKAKNLFK 484
Query: 429 EILA 432
E+++
Sbjct: 485 EVVS 488
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
+ VH LK GL D ++ L+ Y +G+LV + +FDE+ + + +W +M+ QN
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI-- 270
A+ LF M+ +G E + TL SA + +H +E G++
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLH----CLAIETGLVGD 222
Query: 271 --LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
L +AL+N+YAK ++ A +F M R++V+WN ++ +GH +L F++M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-CSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
G + VTF V+SAC L +G + +K+ Y E + ++ + + G
Sbjct: 283 SGQE-ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 388 LLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILA---LEPD 436
A+ + + + + DV+ A+L G E A + ++ + ++PD
Sbjct: 342 TEAAETVFEELVCR-DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 184/360 (51%), Gaps = 5/360 (1%)
Query: 114 QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANG 173
+ AL L++ + G F +LKAC+SL L + KQ+HA V K GL + V
Sbjct: 267 RDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE-LNLGKQIHACVAKLGLESEVSVGTP 325
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP- 232
LV Y A F EI + W+ ++ GY Q EA+ F+ + ++
Sbjct: 326 LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG-SALVNMYAKNGAIAMARKL 291
N T S+ AC+ +G ++H +K +G G SAL+ MY+K G + A ++
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHA-DAIKRSLIGSQYGESALITMYSKCGCLDDANEV 444
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
F+ M ++V W I G A +G+ +AL LFE M G+ PN VTFI VL+AC H GL
Sbjct: 445 FESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK-PNSVTFIAVLTACSHAGL 503
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
++ G+ +M Y + P I+HY CM+D+ R G L EA + +K MP++PD + L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 412 EASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKK 471
N E+ ++ EE+ L+P++ +V N+Y AG+W++ + K M E LKK
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 18/363 (4%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA 141
L A ++F + + N T+I A Q A+ L+ M G P + LLK
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLK- 192
Query: 142 CSSLTP-ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
S + P AL +Q+HAHV++ GL ++ + G+V Y G LV A+ VFD++ +
Sbjct: 193 -SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV 251
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
T ++ GY Q + +AL LF +V EG E + + VL ACA L LG++IH +
Sbjct: 252 ACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
G+E V +G+ LV+ Y K + A + F + E N V+W+ +I G E+A+
Sbjct: 312 AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 371
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM--KTVYGIEPKIEHYG-- 376
F+++ + ++ N T+ + AC ++G V +++ G YG
Sbjct: 372 KTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG-----SQYGES 426
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILA--LE 434
++ + + G L +A E+ + M PD+V A + GN A + E++++ ++
Sbjct: 427 ALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485
Query: 435 PDN 437
P++
Sbjct: 486 PNS 488
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 107 IRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGL 166
+ R A M + G +++ L +AC L H ++ ++ G+
Sbjct: 58 LSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSL--SHGRLLHDRMRMGIEN 115
Query: 167 DS-HVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGM 225
S + N +++ Y L DA +FDE+ + TTM+ YA+ ++A+ LF GM
Sbjct: 116 PSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGM 175
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
+A G +P + ++L + L+ G +IH + G+ + + +VNMY K G +
Sbjct: 176 LASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWL 235
Query: 286 AMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
A+++FD M + V G++ G G DAL LF ++ EGV + F VL A
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEW-DSFVFSVVLKA 294
Query: 346 CCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
C L++G+ + + + G+E ++ +VD
Sbjct: 295 CASLEELNLGKQIHACVAKL-GLESEVSVGTPLVDF 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
NEA + M G + + + AC L G +H+ MR+ V+L + +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCV 124
Query: 276 VNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPN 335
+ MY + ++ A KLFD M E N V+ MI A G ++ A+ LF M G P+
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 336 DVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI 395
+ + +L + + LD GR + + G+ +V++ + G L+ AK +
Sbjct: 185 SM-YTTLLKSLVNPRALDFGRQIHAHVIRA-GLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 396 KGMPWKPDVVILGALL 411
M K V G ++
Sbjct: 243 DQMAVKKPVACTGLMV 258
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 214/424 (50%), Gaps = 29/424 (6%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA--QR-HPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A +F + + N WN++++A QR A++L+ M R + L
Sbjct: 154 GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLA 213
Query: 140 K-----ACSSLTPALPVHKQVHAHVLKFGLGLDSHVA-----------------NGLVRC 177
K L +P + + + G ++ + N ++
Sbjct: 214 KNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITG 273
Query: 178 YSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGAT 236
+ + ++ A +FD +P +++ WTTM+ GY +N + EAL +F M+ +G +PN T
Sbjct: 274 FIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGT 333
Query: 237 LASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDG-- 294
S+LSAC+ L G++IH+ + + I+ SAL+NMY+K+G + ARK+FD
Sbjct: 334 YVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGL 393
Query: 295 MPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDV 354
+ +R++++WN MI A HGH ++A+ ++ M K G P+ VT++ +L AC H GL++
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK-PSAVTYLNLLFACSHAGLVEK 452
Query: 355 GRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEAS 414
G + F + + + EHY C+VDL GR G+L + I + GA+L A
Sbjct: 453 GMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSAC 512
Query: 415 KNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPG 474
+AK V +++L D+ G +V +SN+YA G+ ++ +R MKE+ LKK PG
Sbjct: 513 NVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPG 572
Query: 475 WSLV 478
S V
Sbjct: 573 CSWV 576
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 17/218 (7%)
Query: 182 GDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVL 241
G + +AR +FD +P R + WT ++ GY + EA LF+ + + N T +++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMV 116
Query: 242 SACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVV 301
S RS L + E + + M E V+ + +++ YA++G I A +LFD MPERN+V
Sbjct: 117 SGYLRSKQLSIAEMLFQEM----PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
+WN M+ L G +++A++LFE M + V V++ ++ G +D R +F
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDV-----VSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 362 MKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP 399
M E I + M+ + ++ EA +L + MP
Sbjct: 228 MP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 27/288 (9%)
Query: 173 GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP 232
+V Y S L A +F E+P R++ W TM+ GYAQ+ ++AL LF+ M E
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP----ER 169
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
N + S++ A + G ++ + E M + V + +A+V+ AKNG + AR+LF
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLF 225
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVT--FIGVLSACCHGG 350
D MPERN+++WN MI G A + +++A LF+ M + A N + FI G
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG 285
Query: 351 LLDV--GRDV--FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVI 406
L D ++V + +M T Y + E + + R G + KP+V
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSV------------KPNVGT 333
Query: 407 LGALLEASKNIGNTEVAKVVTEEI-LALEPDNHGVHVSLSNMYAEAGE 453
++L A ++ + + + I ++ N V +L NMY+++GE
Sbjct: 334 YVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 43/273 (15%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N ++ Y+ SG + A +FDE+P R++ W +MV Q +EA+ LFE M
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV- 202
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK- 290
+ +++ A++G ++ R+ + M E +I +A++ YA+N I A +
Sbjct: 203 ---VSWTAMVDGLAKNGKVDEARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQL 255
Query: 291 ------------------------------LFDGMPERNVVTWNGMICGLATHGHVEDAL 320
LFD MPE+NV++W MI G + E+AL
Sbjct: 256 FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM-KTVYGIEPKIEHYGCMV 379
++F M ++G PN T++ +LSAC L G+ + + K+V+ + ++
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT--SALL 373
Query: 380 DLLGRGGKLLEAKELI-KGMPWKPDVVILGALL 411
++ + G+L+ A+++ G+ + D++ +++
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 275 LVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVP 334
L+ K G IA ARKLFDG+PER+VVTW +I G G + +A LF+ ++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR----K 107
Query: 335 NDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL 394
N VT+ ++S L + +F M E + + M+D + G++ +A EL
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMP-----ERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 395 IKGMPWKPDVVILGALLEA 413
MP + ++V ++++A
Sbjct: 163 FDEMP-ERNIVSWNSMVKA 180
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 209/405 (51%), Gaps = 47/405 (11%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLL 139
G + A ++F S + + +WNTL+ A AL L+ M+ G P
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP--------- 474
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR-- 197
+V+ + L + S + NG V +A+ +F ++ S
Sbjct: 475 ------------------NVITWNLIILSLLRNGQVD---------EAKDMFLQMQSSGI 507
Query: 198 --SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
+L WTTM+ G QN CS EA+ M G PN ++ LSACA L +G
Sbjct: 508 IPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRT 567
Query: 256 IHEFMRVKGVEVG--VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
IH ++ ++ ++ V + ++LV+MYAK G I A K+F + N MI A +
Sbjct: 568 IHGYI-IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALY 626
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
G++++A++L+ ++E G+ P+++T VLSAC H G ++ ++F + + ++P +E
Sbjct: 627 GNLKEAIALYRSLEGVGLK-PDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLE 685
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL 433
HYG MVDLL G+ +A LI+ MP+KPD ++ +L+ + TE+ ++ ++L
Sbjct: 686 HYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLES 745
Query: 434 EPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
EP+N G +V++SN YA G W +V+++R+ MK + LKK PG S +
Sbjct: 746 EPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 179/370 (48%), Gaps = 7/370 (1%)
Query: 52 KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIRAQR 111
KQ+HA+++ F L A +FS + N F W +I +
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 112 HP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDS 168
+ AL ++ M + P P + KAC +L + + VH +V+K GL
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWS-RFGRGVHGYVVKSGLEDCV 208
Query: 169 HVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAE 228
VA+ L Y G L DA VFDEIP R+ W ++ GY QN + EA+ LF M +
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
G EP T+++ LSA A G +E G++ H V G+E+ ILG++L+N Y K G I A
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
+FD M E++VVTWN +I G G VEDA+ + + M E + + VT ++SA
Sbjct: 329 EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY-DCVTLATLMSAAAR 387
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
L +G++V C + E I ++D+ + G +++AK++ K D+++
Sbjct: 388 TENLKLGKEVQCYC-IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK-DLILWN 445
Query: 409 ALLEASKNIG 418
LL A G
Sbjct: 446 TLLAAYAESG 455
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 195/399 (48%), Gaps = 14/399 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G L AS++F I N WN L+ + A+ L+ MR+ G P + T L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
A +++ + KQ HA + G+ LD+ + L+ Y G + A VFD + + +
Sbjct: 282 SASANMG-GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W ++ GY Q +A+ + + M E + + TLA+++SA AR+ L+LG+ + +
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY 400
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
E ++L S +++MYAK G+I A+K+FD E++++ WN ++ A G +A
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L LF M+ EGV PN +T+ ++ + G +D +D+F M++ GI P + + M+
Sbjct: 461 LRLFYGMQLEGVP-PNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMM 518
Query: 380 DLLGRGGKLLEAKELIKGMP---WKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
+ + + G EA ++ M +P+ + L A ++ + + + + I+
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 437 NH--GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVP 473
+ + SL +MYA+ G D+ + K + ++P
Sbjct: 579 SSLVSIETSLVDMYAKCG---DINKAEKVFGSKLYSELP 614
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 114 QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFG--LGLDSHVA 171
+ ALSL M G + +L+ C L KQ+HA +LK G + ++
Sbjct: 52 KEALSLVTEMDFRNLRIGPEIYGEILQGCV-YERDLSTGKQIHARILKNGDFYARNEYIE 110
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
LV Y+ L A +F ++ R++ W ++ + AL F M+
Sbjct: 111 TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 170
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
P+ + +V AC G +H ++ G+E V + S+L +MY K G + A K+
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
FD +P+RN V WN ++ G +G E+A+ LF +M K+GV P VT LSA + G
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE-PTRVTVSTCLSASANMGG 289
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
++ G+ ++ V G+E +++ + G L+E E++ ++ DVV
Sbjct: 290 VEEGKQSH-AIAIVNGMELDNILGTSLLNFYCKVG-LIEYAEMVFDRMFEKDVV 341
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 196/390 (50%), Gaps = 40/390 (10%)
Query: 127 GALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD 186
G P + TF ++ S+ + + + KQ+H + LK GL + V + ++ CY L D
Sbjct: 88 GIRPNEFTFGTVI-GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTD 146
Query: 187 ARFVFDE-------------------------------IPSRSLSLWTTMVCGYAQNFCS 215
AR FD+ +P RS+ W ++ G++Q +
Sbjct: 147 ARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRN 206
Query: 216 NEALALFEGMVAEGFE-PNGATLASVLSACARSGCLELGERIHE-FMRVKGVEVGVILGS 273
EA+ F M+ EG PN +T ++A + G+ IH ++ G V + +
Sbjct: 207 EEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWN 266
Query: 274 ALVNMYAKNGAIAMARKLFDGMPE--RNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+L++ Y+K G + + F+ + E RN+V+WN MI G A +G E+A+++FE M K+
Sbjct: 267 SLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTN 326
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP---KIEHYGCMVDLLGRGGKL 388
PN+VT +GVL AC H GL+ G F Y +P ++EHY CMVD+L R G+
Sbjct: 327 LRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRF 385
Query: 389 LEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMY 448
EA+ELIK MP P + ALL + N +AK+ +IL L+P + +V LSN Y
Sbjct: 386 KEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAY 445
Query: 449 AEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ WQ+V +R+ MKE LK+ G S +
Sbjct: 446 SAMENWQNVSLIRRKMKETGLKRFTGCSWI 475
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 210/402 (52%), Gaps = 13/402 (3%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLK 140
D+ A R+F N WN+++ H Q AL ++ M + + T LL+
Sbjct: 277 DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR 336
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
C LP K +H +++ G + + L+ Y+ + DA V D + + +
Sbjct: 337 VCKFFEQPLPC-KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
+TM+ G A S+EA+++F M PN T+ S+L+AC+ S L + H
Sbjct: 396 SCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 261 RVKGVEVGVI-LGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ + + I +G+++V+ YAK GAI MAR+ FD + E+N+++W +I A +G + A
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKA 512
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L+LF+ M+++G PN VT++ LSAC HGGL+ G +F SM +P ++HY C+V
Sbjct: 513 LALFDEMKQKGYT-PNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCIV 570
Query: 380 DLLGRGGKLLEAKELIKGMPW--KPDVVILGALLEASKN-IGNTEVAKVVTEEILALEPD 436
D+L R G++ A ELIK +P K GA+L +N + V E+L LEP
Sbjct: 571 DMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPL 630
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++ S+ +A W+DV +R+ +KE +++ V G+S+V
Sbjct: 631 CSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 194/437 (44%), Gaps = 49/437 (11%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
GDL R F ++ ++ WN ++ + L + +R G P T ++
Sbjct: 75 GDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVI 134
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC SL +++H +V++ G S V N ++ C D + AR +FDE+ R +
Sbjct: 135 HACRSLWFD---GEKIHGYVIRSGFCGISSVQNSIL-CMYADSDSLSARKLFDEMSERDV 190
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEG-FEPNGATLASVLSACARSGCLELGERIHE 258
W+ ++ Y Q+ L LF+ MV E EP+ T+ SVL AC +++G +H
Sbjct: 191 ISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHG 250
Query: 259 FMRVKGVEVG-VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
F +G ++ V + ++L++MY+K + A ++FD RN+V+WN ++ G + +
Sbjct: 251 FSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYD 310
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSAC-----------CHGGLLDVGRD----VFCSM 362
+AL +F M +E V V ++VT + +L C HG ++ G + S+
Sbjct: 311 EALEMFHLMVQEAVEV-DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSL 369
Query: 363 KTVYGIEPKIEHYGCMVDL---------------LGRGGKLLEAKELIKGMPWKPDVVIL 407
Y ++ G ++D L G+ EA + M P+ + +
Sbjct: 370 IDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITV 429
Query: 408 GALLEASKNIGNTEVAK----VVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKT 463
+LL A + +K + LA+ ++ V S+ + YA+ G + R+T
Sbjct: 430 ISLLNACSVSADLRTSKWAHGIAIRRSLAI--NDISVGTSIVDAYAKCGA---IEMARRT 484
Query: 464 MKEERLKKVPGWSLVTT 480
+ K + W+++ +
Sbjct: 485 FDQITEKNIISWTVIIS 501
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 114 QTALSLYITMRRHGA-LPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVAN 172
+ +S Y ++R G FP + KAC+ L+ N
Sbjct: 26 REVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQ--------------------GN 65
Query: 173 GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEP 232
+ Y GDL FD + SR W +V G E L F + GFEP
Sbjct: 66 SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP 125
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
N +TL V+ AC RS + GE+IH ++ G + ++++ MYA + +++ ARKLF
Sbjct: 126 NTSTLVLVIHAC-RSLWFD-GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLF 182
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
D M ER+V++W+ +I L LF+ M E P+ VT VL AC +
Sbjct: 183 DEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDI 242
Query: 353 DVGRDV 358
DVGR V
Sbjct: 243 DVGRSV 248
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 201/426 (47%), Gaps = 39/426 (9%)
Query: 91 IFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTP 147
+F + + F WN +I H ++ LSL+ M P +TF L+ ACS+ +
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 148 ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF------------------ 189
+ + VHA +LK G N ++ Y+ G DA
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 190 -------------VFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGAT 236
VF P +++ WTTM+ GY +N +AL F M+ G + +
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFA 339
Query: 237 LASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP 296
+VL AC+ L G+ IH + G + +G+ALVN+YAK G I A + F +
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA 399
Query: 297 ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
+++V+WN M+ HG + AL L++NM G+ P++VTFIG+L+ C H GL++ G
Sbjct: 400 NKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK-PDNVTFIGLLTTCSHSGLVEEGC 458
Query: 357 DVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW----KPDVVILGALLE 412
+F SM Y I +++H CM+D+ GRGG L EAK+L + LL
Sbjct: 459 MIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLG 518
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
A +TE+ + V++ + EP V LSN+Y G W++ +R+ M E +KK
Sbjct: 519 ACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKT 578
Query: 473 PGWSLV 478
PG S +
Sbjct: 579 PGCSWI 584
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 18/288 (6%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G+ A +F + N W T+I + AL ++ M + G + +L
Sbjct: 285 GETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVL 344
Query: 140 KACSSLTPALPVH-KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
ACS L AL H K +H ++ G ++V N LV Y+ GD+ +A F +I ++
Sbjct: 345 HACSGL--ALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
L W TM+ + + +++AL L++ M+A G +P+ T +L+ C+ SG +E G I E
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 259 FMRVKGVEVGVILG--SALVNMYAKNGAIAMARKLFDGMP-----ERNVVTWNGMICGLA 311
M VK + + + + +++M+ + G +A A+ L N +W ++ +
Sbjct: 463 SM-VKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACS 521
Query: 312 THGHVEDALSLFENMEKEGVAVPN-DVTFIGVLSACCHGGLLDVGRDV 358
TH H E + + ++ +A P+ +++F+ + + C G G DV
Sbjct: 522 THWHTELGREVSKVLK---IAEPSEEMSFVLLSNLYCSTGRWKEGEDV 566
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 131/321 (40%), Gaps = 54/321 (16%)
Query: 181 SGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASV 240
SG + AR VFD +P W TM+ Y++ EA+ALF + +P+ + ++
Sbjct: 17 SGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAI 76
Query: 241 LSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDG------ 294
LS CA G ++ G +I + G + + ++L++MY K A K+F
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 295 ---------------------------MPERNVVTWNGMICGLATHGHVEDALSLFENME 327
MP+R WN MI G A G +E LSLF+ M
Sbjct: 137 NEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM- 195
Query: 328 KEGVAVPNDVTFIGVLSAC-CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
E P+ TF +++AC + GR V M G +E ++ + G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLK-NGWSSAVEAKNSVLSFYTKLG 254
Query: 387 ------KLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
+ LE+ E++ + W ++++A IG TE A E+ L P+ + V
Sbjct: 255 SRDDAMRELESIEVLTQVSWN-------SIIDACMKIGETEKAL----EVFHLAPEKNIV 303
Query: 441 H-VSLSNMYAEAGEWQDVLRL 460
++ Y G+ + LR
Sbjct: 304 TWTTMITGYGRNGDGEQALRF 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 280 AKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF 339
AK+G IA AR++FDGMPE + V WN M+ + G ++A++LF + + A P+D +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL-RFSDAKPDDYSF 73
Query: 340 IGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP 399
+LS C G + GR + S+ G + ++D+ G+ L A ++ + M
Sbjct: 74 TAILSTCASLGNVKFGRKIQ-SLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 400 WKP-DVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVL 458
+ V +LL A N E A V E+ + +S +A G+ + L
Sbjct: 133 CDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMIS---GHAHCGKLESCL 189
Query: 459 RLRKTMKEERLK 470
L K M E K
Sbjct: 190 SLFKEMLESEFK 201
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 223/453 (49%), Gaps = 10/453 (2%)
Query: 32 RQDPPTLAVLADKCTTVEQLKQVHAQMVVT--ARFNDHXXXXXXXXXXXXXXXGDLTHAS 89
R T ++LA T V +Q+H + + +R+N G +A
Sbjct: 133 RPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN---LVVWNSVMDMYRRLGVFDYAL 189
Query: 90 RIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLT 146
+F ++ + WN LI + + + AL + MR P ++T ++ CS L
Sbjct: 190 SVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLR 249
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
L KQ A +K G +S V + +S L D+ +F E+ L +M+
Sbjct: 250 E-LSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMI 308
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
Y+ + C +AL LF + + P+ T +SVLS+ + L+ G +H + G +
Sbjct: 309 GSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFD 367
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
+ + ++L+ MY K G++ +A +F ++++ WN +I GLA + ++L++F +
Sbjct: 368 LDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
P+ VT +G+L ACC+ G ++ G +F SM+ +G+ P EHY C+++LL R G
Sbjct: 428 LMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVG 487
Query: 387 KLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSN 446
+ EAK++ +P++P I +L AS ++G+T +A+ V + +L EP + ++ L
Sbjct: 488 MINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIK 547
Query: 447 MYAEAGEWQDVLRLRKTMKEERLKKVPGWSLVT 479
+Y W++ ++LR M E +LK G S ++
Sbjct: 548 IYEMTWRWENSVKLRYAMNEHKLKSAQGSSKIS 580
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 47/358 (13%)
Query: 129 LPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDAR 188
+P F L+ S L+ + + K VHA +L+ G ++ N ++ Y SG +++A
Sbjct: 1 MPSSLYFSRLVNR-SLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINAL 59
Query: 189 FVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFE---------------GMVAEGFEPN 233
+FD+IP ++ W + G +N N AL LF+ G+V+ GF
Sbjct: 60 QLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEY 119
Query: 234 G-------------------ATLASVLSACARSGCLELGERIHEFMRVKGV-EVGVILGS 273
G + LAS+++ C+ GE+IH GV +++ +
Sbjct: 120 GIRVFFDMQRWEIRPTEFTFSILASLVT------CVRHGEQIHGNAICSGVSRYNLVVWN 173
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
++++MY + G A +F M +R+VV+WN +I + G+ E AL F M + +
Sbjct: 174 SVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ- 232
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
P++ T V+S C L G+ ++ G G +D+ + +L ++ +
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVK 291
Query: 394 LIKGMPWKPDVVILGALLEASK--NIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYA 449
L + + K D V+ +++ + G + + ++ PD LS+M A
Sbjct: 292 LFRELE-KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 10/280 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G L +A +F + + + WNT+I + + + ++ M+R P + TF L
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL- 142
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLG-LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+SL + +Q+H + + G+ + V N ++ Y G A VF + R
Sbjct: 143 ---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W ++ + + AL F M +P+ T++ V+S C+ L G++
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
G I+ A ++M++K + + KLF + + + V N MI + H ED
Sbjct: 260 LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGED 319
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
AL LF + V P+ TF VLS+ + +LD G DV
Sbjct: 320 ALRLFILAMTQSVR-PDKFTFSSVLSS-MNAVMLDHGADV 357
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 202/399 (50%), Gaps = 7/399 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI--RAQRHPQT-ALSLYITMRRHGALPGKHTFPFLL 139
G A + + + + + LI +Q+ T A+ + +M P ++T+ +L
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+C +L + K +H ++K G L+ Y + D+ VF I +
Sbjct: 275 ISCGNLKD-IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ 333
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT+++ G QN AL F M+ + +PN TL+S L C+ E G +IH
Sbjct: 334 VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI 393
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ G + GS L+++Y K G MAR +FD + E +V++ N MI A +G +A
Sbjct: 394 VTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L LFE M G+ PNDVT + VL AC + L++ G ++F S + I +HY CMV
Sbjct: 454 LDLFERMINLGLQ-PNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMV 511
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLLGR G+L EA E++ PD+V+ LL A K E+A+ +T +IL +EP + G
Sbjct: 512 DLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEG 570
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+ +SN+YA G+W V+ ++ MK+ +LKK P S V
Sbjct: 571 TLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWV 609
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 178/395 (45%), Gaps = 19/395 (4%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ +A ++F + + + WN+LI R + A+ +Y M + LP ++T +
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVF 172
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSH---VANGLVRCYSVSGDLVDARFVFDEIPS 196
KA S L+ + +H L LGL+ V + LV Y G +A+ V D +
Sbjct: 173 KAFSDLSLEKEAQR---SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
+ + L T ++ GY+Q EA+ F+ M+ E +PN T ASVL +C + G+ I
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H M G E + ++L+ MY + + + ++F + N V+W +I GL +G
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
E AL F M ++ + PN T L C + + + GR + + T YG +
Sbjct: 350 EMALIEFRKMMRDSIK-PNSFTLSSALRGCSNLAMFEEGRQIH-GIVTKYGFDRDKYAGS 407
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEI--LALE 434
++DL G+ G + L+ + DV+ L ++ + G A + E + L L+
Sbjct: 408 GLIDLYGKCG-CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQ 466
Query: 435 PDNHGVHVSL-----SNMYAEAGEWQDVLRLRKTM 464
P++ V L S + E E D R K M
Sbjct: 467 PNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIM 501
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE 329
I GS LV+ K G I AR++FDGM ER++VTWN +I L H ++A+ ++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 330 GVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG-CMVDLLGRGGKL 388
V +P++ T V A L + + + G+E G +VD+ + GK
Sbjct: 160 NV-LPDEYTLSSVFKAFSDLSLEKEAQRSH-GLAVILGLEVSNVFVGSALVDMYVKFGKT 217
Query: 389 LEAKELIKGMPWKPDVVILGALLEASKNIG-NTEVAK 424
EAK ++ + K DVV++ AL+ G +TE K
Sbjct: 218 REAKLVLDRVEEK-DVVLITALIVGYSQKGEDTEAVK 253
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 210/404 (51%), Gaps = 10/404 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G + A IF+++ + NT +N L+ H AL L+ M + G + +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR-- 197
AC L V +Q+H +KFG + + L+ + + DA +FD+ PS
Sbjct: 425 DACG-LVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLD 483
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAE-GFEPNGATLASVLSACARSGCLELGERI 256
S T+++ GYA+N ++A++LF + E + +L +L+ C G E+G +I
Sbjct: 484 SSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H + G + LG++L++MYAK A K+F+ M E +V++WN +I +
Sbjct: 544 HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG 603
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCH--GGLLDVGRDVFCSMKTVYGIEPKIEH 374
++AL+L+ M ++ + P+ +T V+SA + L RD+F SMKT+Y IEP EH
Sbjct: 604 DEALALWSRMNEKEIK-PDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 375 YGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
Y V +LG G L EA++ I MP +P+V +L ALL++ + NT VAK V + IL+ +
Sbjct: 663 YTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTK 722
Query: 435 PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
P+ ++ SN+Y+ +G W +R+ M+E +K P S +
Sbjct: 723 PETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 45/353 (12%)
Query: 91 IFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGAL-PGKHTFPFLLKACSSLT 146
+F S+ P + LI AL ++ MR+ G + P ++TF +L AC ++
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSV-SGDLVDARF-VFDEIPSRSLSLWTT 204
+ Q+H ++K G V+N L+ Y SG D +FDEIP R ++ W T
Sbjct: 196 -RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNT 254
Query: 205 MVCGYAQNFCSNEALALFEGM-VAEGFEPNGATLASVLSACARSGCLELGERIH------ 257
+V + S++A LF M EGF + TL+++LS+C S L G +H
Sbjct: 255 VVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI 314
Query: 258 -----------------EFMRVKGVEV--------GVILGSALVNMYAKNGAIAMARKLF 292
+F +K VE + + ++ Y G + A ++F
Sbjct: 315 GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF 374
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
+ E+N +T+N ++ G +GH AL LF +M + GV + D + + AC
Sbjct: 375 ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL-TDFSLTSAVDACGLVSEK 433
Query: 353 DVGRDV--FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPD 403
V + FC +K P I+ ++D+ R ++ +A+E+ P D
Sbjct: 434 KVSEQIHGFC-IKFGTAFNPCIQ--TALLDMCTRCERMADAEEMFDQWPSNLD 483
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 6/226 (2%)
Query: 137 FLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS 196
F L S+ + V K VHA LK + + N L+ Y G +A VF + S
Sbjct: 84 FYLLRLSAQYHDVEVTKAVHASFLKLREE-KTRLGNALISTYLKLGFPREAILVFVSLSS 142
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGF-EPNGATLASVLSACARSGCLELGER 255
++ +T ++ G+++ EAL +F M G +PN T ++L+AC R LG +
Sbjct: 143 PTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAM--ARKLFDGMPERNVVTWNGMICGLATH 313
IH + G V + ++L+++Y K+ + KLFD +P+R+V +WN ++ L
Sbjct: 203 IHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKE 262
Query: 314 GHVEDALSLFENMEK-EGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
G A LF M + EG V + T +LS+C +L GR++
Sbjct: 263 GKSHKAFDLFYEMNRVEGFGV-DSFTLSTLLSSCTDSSVLLRGREL 307
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 38/308 (12%)
Query: 90 RIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRR-HGALPGKHTFPFLLKACSSL 145
++F I Q + WNT++ + + A L+ M R G T LL +C+
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD- 297
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTM 205
+ L +++H ++ GL + V N L+ YS D+ +++ + ++ +T M
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 206 VCGYAQ---------------------------NFCSN----EALALFEGMVAEGFEPNG 234
+ Y FC N +AL LF M+ G E
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 235 ATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDG 294
+L S + AC ++ E+IH F G + +AL++M + +A A ++FD
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 295 MPER--NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
P + +I G A +G + A+SLF E ++V+ +L+ C G
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 353 DVGRDVFC 360
++G + C
Sbjct: 538 EMGYQIHC 545
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 202/401 (50%), Gaps = 16/401 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLL 139
G+L A R+F I + + WN +I + A SL+ M L ++ L+
Sbjct: 184 GELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM----PLKSPASWNILI 239
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+ A K G+ + ++ Y+ GD+ A +F + +
Sbjct: 240 GGYVNCREMKLARTYFDAMPQKNGVSWIT-----MISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEG--FEPNGATLASVLSACARSGCLELGERIH 257
++ M+ Y QN +AL LF M+ +P+ TL+SV+SA ++ G G +
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
++ G+++ +L ++L+++Y K G A A K+F + +++ V+++ MI G +G
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+A SLF M ++ + PN VTF G+LSA H GL+ G F SMK + +EP +HYG
Sbjct: 415 EANSLFTAMIEKKIP-PNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGI 472
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDN 437
MVD+LGR G+L EA ELIK MP +P+ + GALL AS N E ++ + LE D
Sbjct: 473 MVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDP 532
Query: 438 HGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
G L+ +Y+ G W D +R ++KE++L K G S V
Sbjct: 533 TGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 193/470 (41%), Gaps = 48/470 (10%)
Query: 38 LAVLADKCTTVEQLKQVHAQMVVTARFN--DHXXXXXXXXXXXXXXXGDLTHASRIFSSI 95
L +C +EQ KQVHAQ+VV R+N + +T+ RI
Sbjct: 6 LRFFLQRCVVLEQAKQVHAQLVVN-RYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGF 64
Query: 96 HQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH 152
+ ++F W L+R R + + +YI M G P H +L+AC + +
Sbjct: 65 NGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVD-G 123
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
K +HA LK GL +V GLV YS G + A+ FD+I ++ W +++ GY ++
Sbjct: 124 KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLES 183
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
+EA +F+ + E + + ++S+ A+ G + + M +K IL
Sbjct: 184 GELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILI 239
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE--------------- 317
VN + +AR FD MP++N V+W MI G G V+
Sbjct: 240 GGYVNCR----EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 318 ----------------DALSLFENM-EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC 360
DAL LF M E+ P+++T V+SA G G V
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE- 354
Query: 361 SMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNT 420
S T +GI+ ++DL +GG +A ++ + K V ++ N T
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 421 EVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
E + T I P N L + Y+ +G Q+ + +MK+ L+
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 205/399 (51%), Gaps = 8/399 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
G A ++FS + + + W T+I + P A+ Y M + P + T +L
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC++L L ++H +K L VAN L+ YS + A +F IP +++
Sbjct: 406 SACATLGD-LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV 464
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT+++ G N EAL M +PN TL + L+ACAR G L G+ IH
Sbjct: 465 ISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAH 523
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ GV + L +AL++MY + G + A F+ +++V +WN ++ G + G
Sbjct: 524 VLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMV 582
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
+ LF+ M K V P+++TFI +L C ++ G F M+ YG+ P ++HY C+V
Sbjct: 583 VELFDRMVKSRVR-PDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVV 640
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG 439
DLLGR G+L EA + I+ MP PD + GALL A + ++ ++ + I L+ + G
Sbjct: 641 DLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVG 700
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
++ L N+YA+ G+W++V ++R+ MKE L G S V
Sbjct: 701 YYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 144/277 (51%), Gaps = 6/277 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI---RAQRHPQTALSLYITMRRHGAL-PGKHTFPFL 138
G+L A +F + + N F WN L+ Q + A+ LY M G + P +TFP +
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L+ C + P L K+VH HV+++G LD V N L+ Y GD+ AR +FD +P R
Sbjct: 203 LRTCGGI-PDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W M+ GY +N +E L LF M +P+ TL SV+SAC G LG IH
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
++ G V + + ++L MY G+ A KLF M +++V+W MI G + +
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVG 355
A+ + M+++ V P+++T VLSAC G LD G
Sbjct: 382 AIDTYRMMDQDSVK-PDEITVAAVLSACATLGDLDTG 417
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 4/248 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
GD+ A +F + + + WN +I L L+ MR P T ++
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
AC L + + +HA+V+ G +D V N L + Y +G +A +F + + +
Sbjct: 305 SACELLGDR-RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WTTM+ GY NF ++A+ + M + +P+ T+A+VLSACA G L+ G +H+
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ VI+ + L+NMY+K I A +F +P +NV++W +I GL + +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 320 LSLFENME 327
L M+
Sbjct: 484 LIFLRQMK 491
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 7/294 (2%)
Query: 114 QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANG 173
+ A+ L +M+ + F L++ C A +V++ L L + N
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCE-WKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV-AEGFEP 232
+ + G+LVDA +VF ++ R+L W +V GYA+ +EA+ L+ M+ G +P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 233 NGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF 292
+ T VL C L G+ +H + G E+ + + +AL+ MY K G + AR LF
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV-PNDVTFIGVLSACCHGGL 351
D MP R++++WN MI G +G + L LF M G++V P+ +T V+SAC G
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAM--RGLSVDPDLMTLTSVISACELLGD 312
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
+GRD+ + T G I + + G EA++L M + D+V
Sbjct: 313 RRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIV 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 45/308 (14%)
Query: 213 FCSN----EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
C+N EA+ L M + +++ C E G +++ +G
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG 128
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK 328
V LG+A + M+ + G + A +F M ERN+ +WN ++ G A G+ ++A+ L+ M
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 329 EGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTV-YGIEPKIEHYGCMVDLLGRGGK 387
G P+ TF VL C GG+ D+ R + V YG E I+ ++ + + G
Sbjct: 189 VGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 388 LLEAKELIKGMP------WK----------------------------PDVVILGALLEA 413
+ A+ L MP W PD++ L +++ A
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 414 SKNIGNTEVAKVVTEEILALE-PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
+ +G+ + + + ++ + V SL+ MY AG W++ +L M+ K +
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER---KDI 363
Query: 473 PGWSLVTT 480
W+ + +
Sbjct: 364 VSWTTMIS 371
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 205/400 (51%), Gaps = 22/400 (5%)
Query: 91 IFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKACSSLTP 147
+F +I N WN++I A + + A+ +++ M G + T LL CSSL
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---LLNICSSLYK 273
Query: 148 A---LP--VHK---QVHAHVLKFGLGLDSHVANGLVRCYS-VSGDLVDARFVFDEIP-SR 197
+ +P V K Q+H+ +K GL + VA L++ YS + D D +F E+ R
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+ W ++ +A + A+ LF + E P+ T +SVL ACA IH
Sbjct: 334 DIVAWNGIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ G +L ++L++ YAK G++ + ++FD M R+VV+WN M+ + HG V+
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
L +F+ M+ P+ TFI +LSAC H G ++ G +F SM P++ HY C
Sbjct: 453 SILPVFQKMDIN----PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYAC 508
Query: 378 MVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL-EPD 436
++D+L R + EA+E+IK MP PD V+ ALL + + GNT + K+ +++ L EP
Sbjct: 509 VIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPT 568
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWS 476
N ++ +SN+Y G + + K M+ R++K P S
Sbjct: 569 NSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLS 608
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 14/223 (6%)
Query: 129 LPGKHTFPFLLKACS---SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLV 185
L + + L +AC+ +L + +H + +H + + +AN L+ Y+ G+++
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSH--PYCYSQNVILANFLINMYAKCGNIL 113
Query: 186 DARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA 245
AR VFD +P R++ WT ++ GY Q E LF M++ F PN TL+SVL++C
Sbjct: 114 YARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR 172
Query: 246 RSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK--NGAIAM-ARKLFDGMPERNVVT 302
E G+++H G+ + + +A+++MY + +GA A A +F+ + +N+VT
Sbjct: 173 ----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVT 228
Query: 303 WNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
WN MI + A+ +F M +GV + T + + S+
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF-DRATLLNICSS 270
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 177/400 (44%), Gaps = 28/400 (7%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G++ +A ++F ++ + N W LI Q L+ +M H P + T +L
Sbjct: 110 GNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVL 168
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGD---LVDARFVFDEIPS 196
+C P KQVH LK GL +VAN ++ Y D +A VF+ I
Sbjct: 169 TSCR-YEPG----KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKF 223
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE-- 254
++L W +M+ + +A+ +F M ++G + ATL ++ S+ +S L E
Sbjct: 224 KNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVS 283
Query: 255 ----RIHEFMRVKGVEVGVILGSALVNMYAKN-GAIAMARKLFDGMPE-RNVVTWNGMIC 308
++H G+ + +AL+ +Y++ KLF M R++V WNG+I
Sbjct: 284 KCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIIT 343
Query: 309 GLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY-G 367
A + E A+ LF + +E ++ P+ TF VL AC GL+ + + + G
Sbjct: 344 AFAVYD-PERAIHLFGQLRQEKLS-PDWYTFSSVLKAC--AGLVTARHALSIHAQVIKGG 399
Query: 368 IEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVT 427
++ + G L + M + DVV ++L+A G + V
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 428 EEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
++ + + PD+ ++L + + AG ++ LR+ ++M E+
Sbjct: 459 QK-MDINPDS-ATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 238 ASVLSACARSGCLELGERIHEFM--RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM 295
A++ ACA L G +H M VIL + L+NMYAK G I AR++FD M
Sbjct: 63 AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122
Query: 296 PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC-------CH 348
PERNVV+W +I G G+ ++ LF +M PN+ T VL++C H
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH--CFPNEFTLSSVLTSCRYEPGKQVH 180
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
G L +G + CS +Y I YG D G EA + + + +K ++V
Sbjct: 181 GLALKLG--LHCS---IYVANAVISMYGRCHD----GAAAYEAWTVFEAIKFK-NLVTWN 230
Query: 409 ALLEASK--NIGNTEV 422
+++ A + N+G +
Sbjct: 231 SMIAAFQCCNLGKKAI 246
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 200/402 (49%), Gaps = 23/402 (5%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQT-----ALSLYITMRRHGALPGKHTFPF 137
G + A + F + + +N L AQ + Q A +Y M+ HG P T
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNAL--AQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP-S 196
+L+ C+ V+ ++K G + HVA+ L+ ++ L A +FD+
Sbjct: 508 MLQTCA-FCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFE 566
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
+S W M+ GY + + EA+A F M E F+PN T +++ A A L +G +
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSV 626
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
H + G +G++LV+MYAK G I + K F + + +V+WN M+ A HG
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
A+SLF +M++ + P+ V+F+ VLSAC H GL++ G+ +F M + IE ++EHY
Sbjct: 687 SCAVSLFLSMQENELK-PDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD 436
CMVDLLG+ G EA E+++ M K V + GALL +S+ N ++ +++ LEP
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPL 805
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
N H S QD RL + R+KKVP S +
Sbjct: 806 NPS-HYS-----------QD-RRLGEVNNVSRIKKVPACSWI 834
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 164/344 (47%), Gaps = 11/344 (3%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIR--AQRHPQTALSLYITMRRHGALPGKHTFPF-LLK 140
DL A ++F +H + WNT++ AQ +A L R + H + L+
Sbjct: 150 DLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIP 209
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
A S L + V + +H V+K G ++GL+ Y DL A VF+E+ + S
Sbjct: 210 AVSKLEKS-DVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDES 266
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W TM+ YA N E L LF+ M N AS L A A G L G IH++
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
+G+ V + ++L++MY+K G + +A +LF + +R+VV+W+ MI G ++A+
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMV 379
SLF +M + + PN VT VL C +G+ + C ++K IE ++E ++
Sbjct: 387 SLFRDMMRIHIK-PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA--DIESELETATAVI 443
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA 423
+ + G+ A + + +P K D V AL + IG+ A
Sbjct: 444 SMYAKCGRFSPALKAFERLPIK-DAVAFNALAQGYTQIGDANKA 486
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
DL A +F + + + W T++ A H + L L+ MR + K
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK-VAAASA 306
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
++ L +H + ++ GL D VA L+ YS G+L A +F I R +
Sbjct: 307 LQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDV 366
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W+ M+ Y Q +EA++LF M+ +PN TL SVL CA LG+ IH +
Sbjct: 367 VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+E + +A+++MYAK G + A K F+ +P ++ V +N + G G A
Sbjct: 427 AIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKA 486
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSAC 346
+++NM+ GV P+ T +G+L C
Sbjct: 487 FDVYKNMKLHGVC-PDSRTMVGMLQTC 512
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 199/470 (42%), Gaps = 66/470 (14%)
Query: 37 TLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIH 96
L ++ +C L QVH ++V+ H DL+ IF S+
Sbjct: 7 NLLLMLRECKNFRCLLQVHGSLIVSG-LKPHNQLINAYSLFQRQ---DLSRV--IFDSVR 60
Query: 97 QPNTFMWNTLIRAQRHP---QTALSLYITM-RRHGALPGKHTFPFLLKACSSLTPALPVH 152
P +WN++IR + AL + M G P K++F F LKAC+ +
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG-SMDFKKG 119
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
++H + + GL D ++ LV Y + DLV AR VFD++ + + W TMV G AQN
Sbjct: 120 LRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQN 179
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
CS+ AL LF M + + + +L +++ A ++ ++ +H + KG
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FS 237
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEK---- 328
S L++MY + A +F+ + ++ +W M+ A +G E+ L LF+ M
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 329 --------------------EGVAVPN---------DV----TFIGVLSACCHGGLLDVG 355
+G+A+ + DV + + + S C G L++
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC---GELEIA 354
Query: 356 RDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLE 412
+F +++ + + + M+ + G+ EA L + M KP+ V L ++L+
Sbjct: 355 EQLFINIE-----DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409
Query: 413 ASKNIGNTEVAKVVTEEILALEPDNHG---VHVSLSNMYAEAGEWQDVLR 459
+ + + K + A++ D ++ +MYA+ G + L+
Sbjct: 410 GCAGVAASRLGKSI--HCYAIKADIESELETATAVISMYAKCGRFSPALK 457
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 48/383 (12%)
Query: 129 LPGKHT-FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDA 187
+P +T +L+ C + L VH + GL H N L+ YS+ +
Sbjct: 1 MPINYTNLLLMLRECKNFRCLLQVHGSLIVS------GLKPH--NQLINAYSLFQRQDLS 52
Query: 188 RFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAE-GFEPNGATLASVLSACAR 246
R +FD + + LW +M+ GY + EAL F M E G +P+ + L ACA
Sbjct: 53 RVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG 112
Query: 247 SGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
S + G RIH+ + G+E V +G+ALV MY K + AR++FD M ++VVTWN M
Sbjct: 113 SMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTM 172
Query: 307 ICGLATHGHVEDALSLFENMEK-----EGVAVPNDVTFIGVLSA-----CCHGGLLDVGR 356
+ GLA +G AL LF +M + V++ N + + L C HG ++ G
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 357 ---------DVFCSMKTVYGIEPKIEH--------YGCMVDLLGRGG---KLLEAKELIK 396
D++C+ +Y E E +G M+ G ++LE +L++
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 397 GMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHG---VHVSLSNMYAEAGE 453
+ + V + L+A+ +G ++ K + A++ G V SL +MY++ GE
Sbjct: 293 NYDVRMNKVAAASALQAAAYVG--DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGE 350
Query: 454 WQDVLRLRKTMKEERLKKVPGWS 476
+ +L +++ + V WS
Sbjct: 351 LEIAEQLFINIED---RDVVSWS 370
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 183/428 (42%), Gaps = 49/428 (11%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
G+L A ++F +I + W+ +I +A +H + A+SL+ M R P T +
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE-AISLFRDMMRIHIKPNAVTLTSV 407
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L+ C+ + A + K +H + +K + + A ++ Y+ G A F+ +P +
Sbjct: 408 LQGCAGVA-ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ + GY Q +N+A +++ M G P+ T+ +L CA G ++
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVE 317
+ G + + AL+NM+ K A+A A LFD E++ V+WN M+ G HG E
Sbjct: 527 QIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV--------FCSM------- 362
+A++ F M+ E PN VTF+ ++ A L VG V FCS
Sbjct: 587 EAVATFRQMKVEKFQ-PNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSL 645
Query: 363 --------------KTVYGIEPK-IEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDV 404
K I K I + M+ G A L M KPD
Sbjct: 646 VDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDS 705
Query: 405 VILGALLEASKNIGNTEVAKVVTEEI-----LALEPDNHGVHVSL---SNMYAEAGEWQD 456
V ++L A ++ G E K + EE+ + E +++ V L + ++ EA E
Sbjct: 706 VSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMR 765
Query: 457 VLRLRKTM 464
+R++ ++
Sbjct: 766 RMRVKTSV 773
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 50/406 (12%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G L +A +F + N WN+L+ + + A +L I M + G P
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP--------- 324
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
D+ N L Y+ G A V ++ + +
Sbjct: 325 ---------------------------DAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 200 S----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL--- 252
+ WT + G ++N AL +F M EG PN AT++++L GCL L
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL---GCLSLLHS 414
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
G+ +H F K + + +ALV+MY K+G + A ++F G+ +++ +WN M+ G A
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 474
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
G E+ ++ F M + G+ P+ +TF VLS C + GL+ G F M++ YGI P I
Sbjct: 475 FGRGEEGIAAFSVMLEAGME-PDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 533
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILA 432
EH CMVDLLGR G L EA + I+ M KPD I GA L + K + E+A++ + +
Sbjct: 534 EHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV 593
Query: 433 LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
LEP N ++ + N+Y+ W+DV R+R M+ R++ WS +
Sbjct: 594 LEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWI 639
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 194/428 (45%), Gaps = 47/428 (10%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKA 141
L A+++F + + + WN ++ + A+ L+ M+ GA T LL+
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS- 200
CS+ +Q+H +VL+ GL + + N L+ YS +G L +R VF+ + R+LS
Sbjct: 99 CSN-KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 201 ----------------------------------LWTTMVCGYAQNFCSNEALALFEGMV 226
W +++ GYA S +A+A+ + M
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
G +P+ ++++S+L A A G L+LG+ IH ++ + V + + L++MY K G +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
AR +FD M +N+V WN ++ GL+ ++DA +L MEKEG+ P+ +T+ + S
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK-PDAITWNSLASGY 336
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PD 403
G + DV MK G+ P + + + + G A ++ M + P+
Sbjct: 337 ATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPN 395
Query: 404 VVILGALLEASKNIGNTEVAKVVTEEILA--LEPDNHGVHVSLSNMYAEAGEWQDVLRLR 461
+ LL+ + K V L L D + V +L +MY ++G+ Q + +
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY-VATALVDMYGKSGDLQSAIEIF 454
Query: 462 KTMKEERL 469
+K + L
Sbjct: 455 WGIKNKSL 462
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 12/281 (4%)
Query: 155 VHAHVLKFGL-GLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
+H ++K GL D+ V + + Y L A +FDE+P R W +V ++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
+A+ LF M G + +T+ +L C+ G +IH ++ G+E V + +
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
+L+ MY++NG + ++RK+F+ M +RN+ +WN ++ G+V+DA+ L + ME G+
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK- 187
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMK--TVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
P+ VT+ +LS GL +D +K + G++P ++ + G L
Sbjct: 188 PDIVTWNSLLSGYASKGL---SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 392 KE----LIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE 428
K +++ W DV + L++ G A++V +
Sbjct: 245 KAIHGYILRNQLWY-DVYVETTLIDMYIKTGYLPYARMVFD 284
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 156/334 (46%), Gaps = 21/334 (6%)
Query: 97 QPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPA-LPVH 152
+P+ WN+L+ ++ + A+++ M+ G P + LL+A + P L +
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE--PGHLKLG 244
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
K +H ++L+ L D +V L+ Y +G L AR VFD + ++++ W ++V G +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILG 272
+A AL M EG +P+ T S+ S A G E + M+ KGV V+
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 273 SALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFEN-MEKEGV 331
+A+ + +KNG A K+F M E V ++T + LSL + E G
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGV---GPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 332 AVPNDVTFIGVLSACCHGGLLDV-GR--DVFCSMKTVYGIEPK-IEHYGCMV---DLLGR 384
+ ++ + A L+D+ G+ D+ +++ +GI+ K + + CM+ + GR
Sbjct: 422 CLRKNL----ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 385 GGKLLEAKELIKGMPWKPDVVILGALLEASKNIG 418
G + + A ++ +PD + ++L KN G
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSG 511
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 209/440 (47%), Gaps = 51/440 (11%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGAL-PGKHTFPFL 138
G+ A+R+F + + +N I S++ MR+ + P TF
Sbjct: 178 GEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNA 237
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP-SR 197
+ AC+SL L +Q+H V+K ++ V L+ YS A VF E+ +R
Sbjct: 238 ITACASLL-NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTR 296
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGAT--------------------- 236
+L W +++ G N A+ LFE + +EG +P+ AT
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 237 --------------LASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKN 282
L S+LSAC+ L+ G+ IH + E + + ++L++MY K
Sbjct: 357 ERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKC 416
Query: 283 GAIAMARKLFDGM--PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFI 340
G + AR++FD ++ V WN MI G HG E A+ +FE + +E V P+ TF
Sbjct: 417 GLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE-PSLATFT 475
Query: 341 GVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM-- 398
VLSAC H G ++ G +F M+ YG +P EH GCM+DLLGR G+L EAKE+I M
Sbjct: 476 AVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSE 535
Query: 399 -PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDV 457
+LG+ + + E A + E LEP+N V LS++YA W+DV
Sbjct: 536 PSSSVYSSLLGSCRQHLDPVLGEEAAMKLAE----LEPENPAPFVILSSIYAALERWEDV 591
Query: 458 LRLRKTMKEERLKKVPGWSL 477
+R+ + +++L K+PG SL
Sbjct: 592 ESIRQVIDQKQLVKLPGLSL 611
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 119/229 (51%), Gaps = 4/229 (1%)
Query: 130 PGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF 189
P K TFP LLK+C+ L + + +HA V+K G +D A LV Y + DA
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQ-GRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 190 VFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGC 249
V DE+P R ++ V G +N +A +F G N T+ASVL C G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 250 LELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICG 309
+E G ++H G E+ V +G++LV+MY++ G +A ++F+ +P ++VVT+N I G
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
L +G + S+F M K PNDVTF+ ++AC L GR +
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 213/437 (48%), Gaps = 17/437 (3%)
Query: 52 KQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFSSIHQPNTFMWNTLIRAQR 111
KQ+H+ +VV + +N GDL+ + R F+++ + + WN+++
Sbjct: 233 KQLHS-LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 112 HPQT---ALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDS 168
+ +L L+ M+ G P F L CS + KQ+H +VLK G + S
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR-NSDIQSGKQIHCYVLKMGFDVSS 350
Query: 169 -HVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVA 227
HV + L+ Y + ++ ++ +P +L +++ + + + +F M+
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRV------KGVEVGVILGSALVNMYAK 281
EG + TL++VL A + L L E +H V G V + +L++ Y K
Sbjct: 411 EGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTK 466
Query: 282 NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIG 341
+G ++RK+FD + N+ +I G A +G D + + M++ + +P++VT +
Sbjct: 467 SGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNL-IPDEVTILS 525
Query: 342 VLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK 401
VLS C H GL++ G +F S+++ YGI P + Y CMVDLLGR G + +A+ L+
Sbjct: 526 VLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGD 585
Query: 402 PDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLR 461
D V +LL++ + N + + E ++ LEP+N V++ +S Y E G+++ ++R
Sbjct: 586 ADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIR 645
Query: 462 KTMKEERLKKVPGWSLV 478
+ L + G+S V
Sbjct: 646 EIAASRELMREIGYSSV 662
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 12/324 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
G+L A F + + +N LI A+ LY M G TFP +L
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 140 KACSSLTPALPVHK--QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF-VFDEIPS 196
CS L + QVH V+ G G + V + LV Y+ LVD +FDE+
Sbjct: 120 SVCSD---ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACL-RLVDVALKLFDEMLD 175
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
R+L++ ++ + Q S ++ M EG NG T ++ C+ + G+++
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 257 HEFMRVKGVEVG-VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
H + G + + + + LV+ Y+ G ++ + + F+ +PE++V++WN ++ A +G
Sbjct: 236 HSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGS 295
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
V D+L LF M+ G P+ F+ L+ C + G+ + C + + +
Sbjct: 296 VLDSLDLFSKMQFWG-KRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 376 GCMVDLLGRGGKLLEAKELIKGMP 399
++D+ G+ + + L + +P
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLP 378
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 37/320 (11%)
Query: 181 SGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASV 240
SG+L+ A FDE+ R + + ++ G ++ CS A+ L+ MV+ G + +T SV
Sbjct: 59 SGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSV 118
Query: 241 LSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV 300
LS C+ G ++H + G + + SALV +YA + +A KLFD M +RN+
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 301 VTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR---- 356
N ++ G + ++ ME EGVA N +T+ ++ C H L+ G+
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVA-KNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 357 --------------------------DVFCSMKTVYGI-EPKIEHYGCMVDLLGRGGKLL 389
D+ SM++ + E + + +V + G +L
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 390 EAKELIKGMPW---KPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHV--SL 444
++ +L M + +P + + L + + K + +L + D +HV +L
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 445 SNMYAEAGEWQDVLRLRKTM 464
+MY + ++ L +++
Sbjct: 358 IDMYGKCNGIENSALLYQSL 377
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 197/408 (48%), Gaps = 23/408 (5%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G L + R+F S+ + + WN L+ + AL ++ M R + T ++
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVV 192
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
K C+SL L KQVHA V+ G L + ++ YS G + +A V++ + +
Sbjct: 193 KTCASL-KILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTD 250
Query: 200 S-LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ +++ G +N EA L PN L+S L+ C+ + L +G++IH
Sbjct: 251 EVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHC 305
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
G L + L++MY K G I AR +F +P ++VV+W MI A +G
Sbjct: 306 VALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVK 365
Query: 319 ALSLFENMEKEGVAV-PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
AL +F M +EG V PN VTF+ V+SAC H GL+ G++ F MK Y + P EHY C
Sbjct: 366 ALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVC 425
Query: 378 MVDLLGRGGKLLEAKELIKGMPWK-----PDVVILGALLEASKNIGNTE---VAKVVTEE 429
+D+L + G+ E L++ M P + + L S N+ T VA+ + EE
Sbjct: 426 FIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEE 485
Query: 430 ILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSL 477
P+N ++V +SN YA G+W V LR +K + L K G SL
Sbjct: 486 T---GPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 194/398 (48%), Gaps = 22/398 (5%)
Query: 86 THASRIFSSIHQPNTFMWNTLIRAQR---HPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
THA +F + Q + N+ + + +P L+L++ + R HTF +L AC
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLW 202
S L+ +QVHA ++K G + L+ YS G LVD+ VF+ + + L W
Sbjct: 95 SLLSYP-ETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSW 153
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
++ G+ +N EAL +F M E E + TL+SV+ CA L+ G+++H + V
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVEDALS 321
G ++ V+LG+A+++ Y+ G I A K+++ + + V N +I G + + ++A
Sbjct: 214 TGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFL 272
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC-SMKTVYGIEPKIEHYGCMVD 380
L PN L+ C L +G+ + C +++ + + K+ ++D
Sbjct: 273 LMSRQR------PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL--CNGLMD 324
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN----TEVAKVVTEEILALEPD 436
+ G+ G++++A+ + + +P K VV ++++A G+ E+ + + EE + P+
Sbjct: 325 MYGKCGQIVQARTIFRAIPSKS-VVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPN 383
Query: 437 NHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPG 474
+ V +S A AG ++ MK E+ + VPG
Sbjct: 384 SVTFLVVISAC-AHAGLVKEGKECFGMMK-EKYRLVPG 419
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 12/233 (5%)
Query: 37 TLAVLADKCTTV---EQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRIFS 93
TL+ + C ++ +Q KQVHA +VVT R G + A ++++
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGR---DLVVLGTAMISFYSSVGLINEAMKVYN 243
Query: 94 SIH-QPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH 152
S++ + M N+LI + ++ M R P L CS L +
Sbjct: 244 SLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR--PNVRVLSSSLAGCSD-NSDLWIG 300
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
KQ+H L+ G DS + NGL+ Y G +V AR +F IPS+S+ WT+M+ YA N
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 213 FCSNEALALFEGMVAE--GFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
+AL +F M E G PN T V+SACA +G ++ G+ M+ K
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
N ++RC + A +FDE+P R LS + + + ++ N+ LALF + +
Sbjct: 22 NLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPD 81
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
+ T VL AC+ E G ++H M +G E G I +AL++MY+K G + + ++
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 292 FDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
F+ + E+++V+WN ++ G +G ++AL +F M +E V + ++ T V+ C +
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI-SEFTLSSVVKTCASLKI 200
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
L G+ V +M V G + + M+ G + EA ++ + D V+L +L+
Sbjct: 201 LQQGKQVH-AMVVVTGRDLVVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLI 258
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 171/333 (51%), Gaps = 7/333 (2%)
Query: 87 HASRIFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLLKACS 143
A +F + + N WN ++ H AL MR+ T ++L CS
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS-RSLSLW 202
++ + + KQ H + + G + VAN L+ Y G L A F ++ R W
Sbjct: 407 GISD-VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
++ G A+ S +AL+ FEGM E +P+ TLA++L+ CA L LG+ IH F+
Sbjct: 466 NALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSL 322
G ++ V++ A+V+MY+K A ++F R+++ WN +I G +G ++ L
Sbjct: 525 DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
F +E EGV P+ VTF+G+L AC G +++G F SM T Y I P++EHY CM++L
Sbjct: 585 FMLLENEGVK-PDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELY 643
Query: 383 GRGGKLLEAKELIKGMPWKPDVVILGALLEASK 415
+ G L + +E + MP+ P + +L + +A +
Sbjct: 644 CKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQ 676
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 176/392 (44%), Gaps = 47/392 (11%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLLKA 141
++ A R+F I P+ WN ++R A+ ++ M P HT ++ A
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA 272
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
CS + AL V K +HA +K + D+ V+ + Y L AR VFD+ S+ L
Sbjct: 273 CSR-SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS 331
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGF------------------------------- 230
WT+ + GYA + + EA LF+ M
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE 391
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
+ TL +L+ C+ +++G++ H F+ G + VI+ +AL++MY K G + A
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 291 LFDGMPE-RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
F M E R+ V+WN ++ G+A G E ALS FE M+ E A P+ T +L+ C +
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE--AKPSKYTLATLLAGCANI 509
Query: 350 GLLDVGRDVFCSM-KTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
L++G+ + + + Y I+ I G MVD+ + A E+ K + D+++
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWN 566
Query: 409 ALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
+++ G + K V E + LE N GV
Sbjct: 567 SIIRGCCRNGRS---KEVFELFMLLE--NEGV 593
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 165/375 (44%), Gaps = 37/375 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPGKHTFPFLL 139
G + A +F + + + WN +I A ++ M R G + +F +L
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVL 169
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
K+C L L + +Q+H V+K+G + + +V Y + DAR VFDEI + S
Sbjct: 170 KSCG-LILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD 228
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
W +V Y + ++EA+ +F M+ P T++SV+ AC+RS LE+G+ IH
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 260 MRVKGVEVGVILGSALVNMYAK-------------------------------NGAIAMA 288
V ++ +++ +MY K +G A
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
R+LFD MPERN+V+WN M+ G H H D F + ++ + ++VT + +L+ C
Sbjct: 349 RELFDLMPERNIVSWNAMLGGY-VHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSG 407
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILG 408
+ +G+ + +G + + ++D+ G+ G L A + M D V
Sbjct: 408 ISDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 409 ALLEASKNIGNTEVA 423
ALL +G +E A
Sbjct: 467 ALLTGVARVGRSEQA 481
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 151/341 (44%), Gaps = 23/341 (6%)
Query: 135 FPFLLKACSSLTPALPVH-KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDE 193
+ L ++CSS AL V ++V +H++ F + N + Y G + DAR +F+E
Sbjct: 64 YERLFRSCSS--KALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 194 IPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+P R W ++ AQN S+E +F M +G + A VL +C L L
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH 313
++H + G V L +++V++Y K ++ AR++FD + + V+WN ++
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
G ++A+ +F M + V P + T V+ AC L+VG K ++ I K+
Sbjct: 242 GFNDEAVVMFFKMLELNVR-PLNHTVSSVMLACSRSLALEVG-------KVIHAIAVKLS 293
Query: 374 HYGCMV------DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVT 427
V D+ + +L A+ + K D+ + + G T A+
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK-DLKSWTSAMSGYAMSGLTREAR--- 349
Query: 428 EEILALEPDNHGVHV-SLSNMYAEAGEWQDVLRLRKTMKEE 467
E+ L P+ + V ++ Y A EW + L M++E
Sbjct: 350 -ELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 180/398 (45%), Gaps = 39/398 (9%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
++ A + + + WN++I Q ALS++ M T P +L
Sbjct: 277 EMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN 336
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
+ + + H ++K G V N LV Y+ G + A VF+ + + +
Sbjct: 337 CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVI 396
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
WT +V G N +EAL LF M G P+ ASVLSA A LE G+++H
Sbjct: 397 SWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNY 456
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
G + + ++LV MY K G++ EDA
Sbjct: 457 IKSGFPSSLSVNNSLVTMYTKCGSL-------------------------------EDAN 485
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+F +ME + + +T+ ++ GLL+ + F SM+TVYGI P EHY CM+D
Sbjct: 486 VIFNSME-----IRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMID 540
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
L GR G ++ ++L+ M +PD + A+L AS+ GN E + + ++ LEP+N
Sbjct: 541 LFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVP 600
Query: 441 HVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+V LSNMY+ AG + +R+ MK + K PG S V
Sbjct: 601 YVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 198/414 (47%), Gaps = 47/414 (11%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLLKA 141
L+ A ++F S NT WN LI + A +L+ M+ G P ++T +L+
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM 134
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
C+SL L +Q+H H +K G LD +V NGL+ Y+ + +A ++F+ + ++
Sbjct: 135 CTSLVLLLR-GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNV 193
Query: 202 -WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
WT+M+ GY+QN + +A+ F + EG + N T SVL+ACA +G ++H +
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
G + + + SAL++MYAK + AR L +GM +VV+WN MI G G + +AL
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGL-LDVGRDVFCSM-KTVYGIEPKIEHYGCM 378
S+F M + + + +D T +L+ + + C + KT Y + + +
Sbjct: 314 SMFGRMHERDMKI-DDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN--AL 370
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVA--------------- 423
VD+ + G + A ++ +GM K DV+ AL+ + + G+ + A
Sbjct: 371 VDMYAKRGIMDSALKVFEGMIEK-DVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 424 KVVTEEILA-------LE--------------PDNHGVHVSLSNMYAEAGEWQD 456
K+VT +L+ LE P + V+ SL MY + G +D
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLED 483
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 167 DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
D N ++ YS S L DA +F P ++ W ++ GY ++ EA LF M
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
++G +PN TL SVL C L GE+IH G ++ V + + L+ MYA+ I+
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 287 MARKLFDGMP-ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
A LF+ M E+N VTW M+ G + +G A+ F ++ +EG N TF VL+A
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQ-SNQYTFPSVLTA 236
Query: 346 CCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
C VG V C + G + I ++D+ + ++ A+ L++GM
Sbjct: 237 CASVSACRVGVQVHCCI-VKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
G IH + + ++LG +K+G + AR++FD MPER+ TWN MI +
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
+ DA LF + V N +++ ++S C G ++F M++ GI+P
Sbjct: 71 NSRRLSDAEKLFRSN-----PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKP 123
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 146/267 (54%), Gaps = 5/267 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G+++ ++F + NT W ++I A + A+SL+ M+R + T +L
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
+AC S+ AL + K++HA ++K + + ++ + LV Y G+ DA V ++PSR +
Sbjct: 393 RACGSV-GALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDV 451
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT M+ G + +EAL + M+ EG EPN T +S L ACA S L +G IH
Sbjct: 452 VSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSI 511
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ V +GSAL++MYAK G ++ A ++FD MPE+N+V+W MI G A +G +A
Sbjct: 512 AKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREA 571
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSAC 346
L L ME EG V +D F +LS C
Sbjct: 572 LKLMYRMEAEGFEV-DDYIFATILSTC 597
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 202/411 (49%), Gaps = 13/411 (3%)
Query: 32 RQDPPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHASRI 91
R D LA + +K++HA + F+D GDL +A ++
Sbjct: 82 RVDYALLAEWLQSSNGMRLIKRIHAMALKC--FDDQVIYFGNNLISSCVRLGDLVYARKV 139
Query: 92 FSSIHQPNTFMWNTLIRAQRH---PQTALSLYITMRRHGA-LPGKHTFPFLLKACSSLTP 147
F S+ + NT W +I A +L+ +HG + F LL CS
Sbjct: 140 FDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR-RA 198
Query: 148 ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVC 207
+ +QVH +++K G+G + V + LV Y+ G+L A FD + + + WT ++
Sbjct: 199 EFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS 257
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
++ +A+ +F GM+ F PN T+ S+L AC+ L G ++H + + ++
Sbjct: 258 ACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENME 327
V +G++L++MYAK G I+ RK+FDGM RN VTW +I A G E+A+SLF M+
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 328 KEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
+ + + N++T + +L AC G L +G+++ + IE + +V L + G+
Sbjct: 378 RRHL-IANNLTVVSILRACGSVGALLLGKELHAQI-IKNSIEKNVYIGSTLVWLYCKCGE 435
Query: 388 LLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPD 436
+A +++ +P + DVV A++ ++G+ A +E++ +EP+
Sbjct: 436 SRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 175/360 (48%), Gaps = 7/360 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLL 139
G+LT A R F + + + W +I A + H A+ ++I M H LP + T +L
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
KACS AL +QVH+ V+K + D V L+ Y+ G++ D R VFD + +R+
Sbjct: 292 KACSE-EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNT 350
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT+++ +A+ EA++LF M N T+ S+L AC G L LG+ +H
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ +E V +GS LV +Y K G A + +P R+VV+W MI G ++ GH +A
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA 470
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
L + M +EGV PN T+ L AC + L +GR + K + + + ++
Sbjct: 471 LDFLKEMIQEGVE-PNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALI 528
Query: 380 DLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE-EILALEPDNH 438
+ + G + EA + MP K V ++ ++N E K++ E E D++
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDY 588
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 177/374 (47%), Gaps = 42/374 (11%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR--AQRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
G+L + F I N WN L+ A + LSL++ M + G P ++TF LK
Sbjct: 365 GNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 141 ACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD-------- 192
+C + +Q+H+ +++ G + +V + L+R Y+ + + DA + D
Sbjct: 425 SC-----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSV 479
Query: 193 -------EIPSR------SLSL-----------WTTMVCGYAQNFCSNEALALFEGMVAE 228
I SR S+ L W + +++ E + LF+ M+
Sbjct: 480 VPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS 539
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG-VILGSALVNMYAKNGAIAM 287
P+ T S+LS C++ L LG IH + + + L++MY K G+I
Sbjct: 540 NIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRS 599
Query: 288 ARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
K+F+ E+N++TW +I L HG+ ++AL F+ G P+ V+FI +L+AC
Sbjct: 600 VMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFK-PDRVSFISILTACR 658
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVIL 407
HGG++ G +F MK YG+EP+++HY C VDLL R G L EA+ LI+ MP+ D +
Sbjct: 659 HGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVW 717
Query: 408 GALLEASKNIGNTE 421
L+ +
Sbjct: 718 RTFLDGCNRFAEEQ 731
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKA 141
L A ++F + + WN ++ H + + + + R GA + +F +LK
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSL 201
S + L + KQ+H K GL + V N L+ Y G+ A +F + S +
Sbjct: 225 VSCVKD-LDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W ++C A++ +AL LF M GF PN T SVL + L G +IH +
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATH-GHVEDAL 320
G E G++LG+AL++ YAK G + +R FD + ++N+V WN ++ G A G + L
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CL 401
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACC 347
SLF M + G P + TF L +CC
Sbjct: 402 SLFLQMLQMGFR-PTEYTFSTALKSCC 427
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLL 139
G+++ A ++F + + N +NT+I+ A ++ MR G LP + T LL
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL 122
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGL-DSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
+C+SL + Q+H LK+GL + D+ V L+ Y L A VF+++P +S
Sbjct: 123 -SCASLD--VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS 179
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
L W M+ E + F +V G ++ VL + L++ +++H
Sbjct: 180 LETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHC 239
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
KG++ + + ++L++ Y K G MA ++F ++V+WN +IC A +
Sbjct: 240 SATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLK 299
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
AL LF +M + G + PN T++ VL LL GR + M G E I +
Sbjct: 300 ALKLFVSMPEHGFS-PNQGTYVSVLGVSSLVQLLSCGRQIH-GMLIKNGCETGIVLGNAL 357
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKN 416
+D + G LE L ++V ALL N
Sbjct: 358 IDFYAKCGN-LEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 141/286 (49%), Gaps = 11/286 (3%)
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFG--LGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
LL C P+ K +HA + L +V N ++ Y G++ A VFD++P
Sbjct: 18 LLNVCRK-APSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
R+ + T++ GY++ ++A +F M G+ PN +T++ +LS CA S + G +
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CA-SLDVRAGTQ 134
Query: 256 IHEFMRVKGVEVG-VILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHG 314
+H G+ + +G+ L+ +Y + + MA ++F+ MP +++ TWN M+ L G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 315 HVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH 374
+++ + F + + G ++ + +F+GVL LD+ + + CS T G++ +I
Sbjct: 195 FLKECMFFFRELVRMGASL-TESSFLGVLKGVSCVKDLDISKQLHCS-ATKKGLDCEISV 252
Query: 375 YGCMVDLLGRGGKLLEAKELIKGM-PWKPDVVILGALLEASKNIGN 419
++ G+ G A+ + + W D+V A++ A+ N
Sbjct: 253 VNSLISAYGKCGNTHMAERMFQDAGSW--DIVSWNAIICATAKSEN 296
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 184/400 (46%), Gaps = 37/400 (9%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKAC 142
G L A ++F S+ + + WN++I T GK F
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMI--------------TGYCQAGYCGKAYELFTRMQD 446
Query: 143 SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVD--ARFVFDEIPSRSLS 200
++L P +++ + + ++ NG G+ +D R D R+ +
Sbjct: 447 ANLRP----------NIITWNTMISGYIKNG------DEGEAMDLFQRMEKDGKVQRNTA 490
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W ++ GY QN +EAL LF M F PN T+ S+L ACA ++ IH +
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 550
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
+ ++ + +AL + YAK+G I +R +F GM ++++TWN +I G HG AL
Sbjct: 551 LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPAL 610
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHG--GLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
+LF M+ +G+ PN T ++ A HG G +D G+ VF S+ Y I P +EH M
Sbjct: 611 ALFNQMKTQGI-TPNRGTLSSIILA--HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAM 667
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNH 438
V L GR +L EA + I+ M + + I + L + G+ ++A E + +LEP+N
Sbjct: 668 VYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENT 727
Query: 439 GVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKVPGWSLV 478
+S +YA + L K ++ LKK G S +
Sbjct: 728 ATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWI 767
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 177/368 (48%), Gaps = 21/368 (5%)
Query: 122 TMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGL--DSHVANGLVRCYS 179
++ + G+ + T+ LL++C + ++ + + +HA +FGL D V L+ Y+
Sbjct: 71 SLFQQGSKVKRSTYLKLLESCID-SGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYA 126
Query: 180 VSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLAS 239
G + DAR VFD + R+L W+ M+ Y++ E LF M+ +G P+
Sbjct: 127 KCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPK 186
Query: 240 VLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN 299
+L CA G +E G+ IH + G+ + + ++++ +YAK G + A K F M ER+
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 300 VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF 359
V+ WN ++ +G E+A+ L + MEKEG++ P VT+ ++ G D D+
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS-PGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKN 416
M+T +GI + + M+ L G +A ++ + M P+ V + + + A
Sbjct: 306 QKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 417 IG----NTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLKKV 472
+ +EV + + D+ V SL +MY++ G+ +D RK + K V
Sbjct: 365 LKVINQGSEVHSIAVKMGFI---DDVLVGNSLVDMYSKCGKLEDA---RKVFDSVKNKDV 418
Query: 473 PGWSLVTT 480
W+ + T
Sbjct: 419 YTWNSMIT 426
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 170/382 (44%), Gaps = 48/382 (12%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQ----RHPQTALSLYITMRRHGALPGKHTFPFL 138
G+L A++ F + + + WN+++ A +H + A+ L M + G PG T+ L
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE-AVELVKEMEKEGISPGLVTWNIL 288
Query: 139 LKACSSL---TPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
+ + L A+ + +++ FG+ D VF
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMET----FGITAD----------------------VF---- 318
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
WT M+ G N +AL +F M G PN T+ S +SAC+ + G
Sbjct: 319 -----TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
+H G V++G++LV+MY+K G + ARK+FD + ++V TWN MI G G+
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
A LF M+ + PN +T+ ++S G D+F M+ ++ +
Sbjct: 434 CGKAYELFTRMQDANLR-PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEILA 432
++ + GK EA EL + M + P+ V + +LL A N+ ++ + + +L
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 433 LEPDN-HGVHVSLSNMYAEAGE 453
D H V +L++ YA++G+
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGD 574
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 142/333 (42%), Gaps = 40/333 (12%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFL 138
G + A ++F S+ + N F W+ +I R R + A L+ M + G LP FP +
Sbjct: 129 GCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA-KLFRLMMKDGVLPDDFLFPKI 187
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L+ C++ + K +H+ V+K G+ V+N ++ Y+ G+L A F + R
Sbjct: 188 LQGCANCGD-VEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ W +++ Y QN EA+ L + M EG P T ++ + G + + +
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 259 FMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVED 318
M G+ V +A MI GL +G
Sbjct: 307 KMETFGITADVFTWTA-------------------------------MISGLIHNGMRYQ 335
Query: 319 ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
AL +F M GV VPN VT + +SAC +++ G +V S+ G + +
Sbjct: 336 ALDMFRKMFLAGV-VPNAVTIMSAVSACSCLKVINQGSEVH-SIAVKMGFIDDVLVGNSL 393
Query: 379 VDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
VD+ + GKL +A+++ + K DV +++
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNK-DVYTWNSMI 425
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 168/334 (50%), Gaps = 42/334 (12%)
Query: 84 DLTHASRIFSSIHQPNTFMWNTLIR--AQR-HPQTALSLYITMRRHGALPGKHTFPFLLK 140
DL +A + F + + + WN ++ AQ + AL L+ M R G P + T+ ++
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 141 ACS-----SLTPALPV---HKQVHAHVLKFGLGLDSHVA--------------------- 171
ACS SLT +L K+V + LD H
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLV 332
Query: 172 --NGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEG 229
N ++ Y+ GD+ AR +FD +P R++ W +++ GYA N + A+ FE M+ G
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Query: 230 -FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
+P+ T+ SVLSAC LELG+ I +++R +++ +L+ MYA+ G + A
Sbjct: 393 DSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Query: 289 RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCH 348
+++FD M ER+VV++N + A +G + L+L M+ EG+ P+ VT+ VL+AC
Sbjct: 453 KRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE-PDRVTYTSVLTACNR 511
Query: 349 GGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
GLL G+ +F S++ P +HY CM DLL
Sbjct: 512 AGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 38/265 (14%)
Query: 183 DLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLS 242
DL +AR FD +P +S+ W M+ GYAQN + +AL LF M+ G PN T V+S
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 243 ACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKN-------------------- 282
AC+ L + + + K V + + +AL++M+AK
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLV 332
Query: 283 ------------GAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
G ++ AR+LFD MP+RNVV+WN +I G A +G A+ FE+M G
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Query: 331 VAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEH--YGCMVDLLGRGGKL 388
+ P++VT I VLSAC H L++G C + + + K+ Y ++ + RGG L
Sbjct: 393 DSKPDEVTMISVLSACGHMADLELGD---CIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 389 LEAKELIKGMPWKPDVVILGALLEA 413
EAK + M + DVV L A
Sbjct: 450 WEAKRVFDEMK-ERDVVSYNTLFTA 473
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 192/508 (37%), Gaps = 116/508 (22%)
Query: 30 ITRQDPPTLAVLADKCTTVEQLKQVHAQMVVTARFNDHXXXXXXXXXXXXXXXGDLTHAS 89
++R+ +LA +A + T QL Q+HAQ++V +
Sbjct: 1 MSRELTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTR 60
Query: 90 RIFSSIHQPNTFMWNTLIRAQRHPQTA---LSLYITMRRHGALPGKHTFPFLLKACSSLT 146
IF S+ PN F+ N++ + A L LY R G +P +FP ++K+
Sbjct: 61 LIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFG 120
Query: 147 PALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
A V K G D +V N ++ Y + AR VFD+I R S W M+
Sbjct: 121 ILF------QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
GY + EA LF+ M E
Sbjct: 175 SGYWKWGNKEEACKLFDMM---------------------------------------PE 195
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENM 326
V+ + ++ +AK + ARK FD MPE++VV+WN M+ G A +G EDAL LF +M
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 327 EKEGVAVPNDVTFIGVLSACCHGG----------LLDVGR-DVFCSMKTV---------- 365
+ GV PN+ T++ V+SAC L+D R + C +KT
Sbjct: 256 LRLGVR-PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 366 ----------YGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP------W--------- 400
G + + + M+ R G + A++L MP W
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 401 --------------------KPDVVILGALLEASKNIGNTEVAKVVTEEILALEPD-NHG 439
KPD V + ++L A ++ + E+ + + I + N
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDS 434
Query: 440 VHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
+ SL MYA G + R+ MKE
Sbjct: 435 GYRSLIFMYARGGNLWEAKRVFDEMKER 462
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 5/183 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHP-QTALSL--YITMRRHG-ALPGKHTFPFL 138
GD++ A ++F ++ + N WN+LI H Q AL++ + M +G + P + T +
Sbjct: 345 GDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISV 404
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
L AC + L + + ++ K + L+ L+ Y+ G+L +A+ VFDE+ R
Sbjct: 405 LSACGHMAD-LELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERD 463
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE 258
+ + T+ +A N E L L M EG EP+ T SVL+AC R+G L+ G+RI +
Sbjct: 464 VVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFK 523
Query: 259 FMR 261
+R
Sbjct: 524 SIR 526
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 171/318 (53%), Gaps = 5/318 (1%)
Query: 167 DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMV 226
D+ N L+ + SGD +A V ++P+ + S W T++ GY + S EA F M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
+ G + +L+ VL+A A + G IH G++ V++ SAL++MY+K G +
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 287 MARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
A +F MP +N++ WN MI G A +G +A+ LF +++E P+ TF+ +L+ C
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Query: 347 CHGGL-LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVV 405
H + ++V F M Y I+P +EH ++ +G+ G++ +AK++I+ + D V
Sbjct: 433 SHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGV 492
Query: 406 ILGALLEASKNIGNTEVAKVVTEEILAL---EPDNHGVHVSLSNMYAEAGEWQDVLRLRK 462
ALL A + + AK V +++ L + D + +++ +SN+YA W++V ++RK
Sbjct: 493 AWRALLGACSARKDLKAAKTVAAKMIELGDADKDEY-LYIVMSNLYAYHERWREVGQIRK 551
Query: 463 TMKEERLKKVPGWSLVTT 480
M+E + K G S + +
Sbjct: 552 IMRESGVLKEVGSSWIDS 569
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQN 212
+Q+H +V K G ++ ++N L+R Y S L DA VFDE+P + W ++V GY Q+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 213 FCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG-VIL 271
E + LF + PN + + L+ACAR LG IH + G+E G V++
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
G+ L++MY K G + A +F M E++ V+WN ++ + +G +E L F M
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN--- 251
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSM 362
P+ VT+ ++ A G + V M
Sbjct: 252 --PDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
W+T+V A+ F S L ++ +G +P+ + L +L G + L ++H ++
Sbjct: 24 WSTIVPALAR-FGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALS 321
G L ++L+ Y + ++ A K+FD MP+ +V++WN ++ G G ++ +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG-CMVD 380
LF + + V PN+ +F L+AC L +G + + + G+E G C++D
Sbjct: 143 LFLELHRSDV-FPNEFSFTAALAACARLHLSPLGACIHSKLVKL-GLEKGNVVVGNCLID 200
Query: 381 LLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEV 422
+ G+ G + +A + + M K D V A++ + G E+
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLEL 241
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLL 139
GD +A ++ S + PN+ WNT++ + + A + M G +++ ++
Sbjct: 268 GDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLS-IV 326
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
A + +P +HA K GL VA+ L+ YS G L A +F +P ++L
Sbjct: 327 LAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNL 386
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGF-EPNGATLASVLSACA 245
+W M+ GYA+N S EA+ LF + E F +P+ T ++L+ C+
Sbjct: 387 IVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 143/363 (39%), Gaps = 58/363 (15%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKA 141
L A ++F + P+ WN+L+ Q + L++ + R P + +F L A
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGL-DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS 200
C+ L + P+ +H+ ++K GL + V N L+ Y G + DA VF + +
Sbjct: 166 CARLHLS-PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
W +V ++C+R+G LELG + F
Sbjct: 225 SWNAIV-----------------------------------ASCSRNGKLELG--LWFFH 247
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL 320
++ + + + L++ + K+G A ++ MP N +WN ++ G +A
Sbjct: 248 QMPNPD--TVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEAT 305
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCH-----GGLLDVGRDVFCSMKTVYGIEPKIEHY 375
F M GV I + + G L+ C+ K G++ ++
Sbjct: 306 EFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA-----CAHKL--GLDSRVVVA 358
Query: 376 GCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTE--EILAL 433
++D+ + G L A+ + MP K +V + ++N + E K+ + + L
Sbjct: 359 SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL 418
Query: 434 EPD 436
+PD
Sbjct: 419 KPD 421
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 142/315 (45%), Gaps = 5/315 (1%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLL 139
GD+ R+F Q N W L+ A AL + M++ G P T +L
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVL 425
Query: 140 KACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL 199
C+ L A+ K++H + LK + + L+ YS G +FD + R++
Sbjct: 426 PVCAELR-AIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
WT M+ Y +N + +F M+ P+ T+ VL+ C+ L+LG+ +H
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDA 319
+ K E + + ++ MY K G + A FD + + +TW +I + DA
Sbjct: 545 ILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDA 604
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMV 379
++ FE M G PN TF VLS C G +D F M +Y ++P EHY ++
Sbjct: 605 INCFEQMVSRGFT-PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVI 663
Query: 380 DLLGRGGKLLEAKEL 394
+LL R G++ EA+ L
Sbjct: 664 ELLNRCGRVEEAQRL 678
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 9/285 (3%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIR-----AQRHPQTALSLYITMRRHGALPGKHTFPF 137
G + A ++F N + WN L+R ++ Q LS + MR G ++
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
+ K+ + + AL + HA +K GL + LV Y G + AR VFDEI R
Sbjct: 220 VFKSFAGAS-ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACARSGCLELGERI 256
+ +W M+ G A N EAL LF M++ E PN L ++L L+LG+ +
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 257 H-EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGH 315
H ++ K + S L+++Y K G +A R++F G +RN ++W ++ G A +G
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFC 360
+ AL M++EG P+ VT VL C + G+++ C
Sbjct: 399 FDQALRSIVWMQQEGFR-PDVVTIATVLPVCAELRAIKQGKEIHC 442
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 147/309 (47%), Gaps = 8/309 (2%)
Query: 95 IHQPNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPV 151
+H N ++ + I+ Q + + AL++ + + G TF LL+AC +L
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVR-RKSLLH 129
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCG--Y 209
KQVH H+ GL + + LV Y+ G + DA+ VFDE S ++ W ++ G
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
+ + L+ F M G + N +L++V + A + L G + H G+ V
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKE 329
L ++LV+MY K G + +AR++FD + ER++V W MI GLA + +AL LF M E
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE 309
Query: 330 GVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS-MKTVYGIEPKIEHYGCMVDLLGRGGKL 388
PN V +L L +G++V +K+ +E H G ++DL + G +
Sbjct: 310 EKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCGDM 368
Query: 389 LEAKELIKG 397
+ + G
Sbjct: 369 ASGRRVFYG 377
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 129/281 (45%), Gaps = 7/281 (2%)
Query: 83 GDLTHASRIFSSIHQPNTFMWNTLIRAQRHPQT---ALSLYITM-RRHGALPGKHTFPFL 138
G + A R+F I + + +W +I H + AL L+ TM P +
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 139 LKACSSLTPALPVHKQVHAHVLKFGLGLDS-HVANGLVRCYSVSGDLVDARFVFDEIPSR 197
L + AL + K+VHAHVLK ++ V +GL+ Y GD+ R VF R
Sbjct: 323 LPVLGDVK-ALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
+ WT ++ GYA N ++AL M EGF P+ T+A+VL CA ++ G+ IH
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIH 441
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVE 317
+ V L ++L+ MY+K G +LFD + +RNV W MI + +
Sbjct: 442 CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLR 501
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
+ +F M P+ VT VL+ C L +G+++
Sbjct: 502 AGIEVFRLMLLSK-HRPDSVTMGRVLTVCSDLKALKLGKEL 541
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 225 MVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGA 284
++ +G P+ + +CA LE +++H+ L + +++M+ + +
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 285 IAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLS 344
I A+++FD M ++++ +W+ M+C + +G +DAL LFE M K G+ PN+ TF+ V
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK-PNEETFLTVFL 345
Query: 345 ACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDV 404
AC G ++ F SMK +GI PK EHY ++ +LG+ G L+EA++ I+ +P++P
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 405 VILGALLEASKNIGNTEVAKVVTEEILALEP 435
A+ ++ G+ ++ + E ++ ++P
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 121 ITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSV 180
I + GA+P + F L ++C++L +L K+VH H L+ D + N ++ +
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLK-SLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGE 283
Query: 181 SGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASV 240
+ DA+ VFD + + + W M+C Y+ N ++AL LFE M G +PN T +V
Sbjct: 284 CSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTV 343
Query: 241 LSACARSGCLELGERIHEFMRVK---GVEVGVILGSALVNMYAKNGAIAMARKLFDGMP- 296
ACA G +E E F +K G+ ++ + K G + A + +P
Sbjct: 344 FLACATVGGIE--EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPF 401
Query: 297 ERNVVTWNGMICGLATHGHVE 317
E W M HG ++
Sbjct: 402 EPTADFWEAMRNYARLHGDID 422
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 173/367 (47%), Gaps = 23/367 (6%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF 135
GD A + + + Q P ++NT+I +H AL+L+ M G P T+
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
L+ +C ++ + +++ + D + L+ + G LV+A ++DE+
Sbjct: 295 SSLI-SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 196 SRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
RS+ +++++ G+ + +EA +FE MV++ P+ T +++ + +E
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLF-----DGMPERNVVTWNGM 306
G + M +G+ + + L+ + G MA+++F DG+P N++T+N +
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-NIMTYNTL 472
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
+ GL +G +E A+ +FE +++ + P T+ ++ C G ++ G D+FC++ ++
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKME-PTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLK 530
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVA 423
G++P + Y M+ R G EA L K M P+ L+ A G+ E +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 424 KVVTEEI 430
+ +E+
Sbjct: 591 AELIKEM 597
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 181/400 (45%), Gaps = 32/400 (8%)
Query: 90 RIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CS-- 143
++F + +QPNT +NTLI A++L M G P T+ ++ C
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 144 SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL---- 199
A + ++ L+ G+ + + + +GL + + DA +F E+ ++ +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD----DALNLFKEMETKGIRPNV 291
Query: 200 ---SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
S + +C Y + ++A L M+ P+ T ++++ A + G L E++
Sbjct: 292 VTYSSLISCLCNYGR---WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLAT 312
++ M + ++ ++ S+L+N + + + A+++F+ M + +VVT+N +I G
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
+ VE+ + +F M + G+ V N VT+ ++ G D+ +++F M + G+ P I
Sbjct: 409 YKRVEEGMEVFREMSQRGL-VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNI 466
Query: 373 EHYGCMVDLLGRGGKLLEAK---ELIKGMPWKPDVVILGALLEASKNIGNTEVA--KVVT 427
Y ++D L + GKL +A E ++ +P + ++E G E
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 428 EEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
+ ++PD + +S + G ++ L K MKE+
Sbjct: 527 LSLKGVKPDVVAYNTMISG-FCRKGSKEEADALFKEMKED 565
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 138/307 (44%), Gaps = 14/307 (4%)
Query: 116 ALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLV 175
A++L+ M + P F LL A + + V + + G+ + + + L+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK-FDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 176 RCYSVSGDLVDARFVFDEIPSR----SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFE 231
C+ L A V ++ ++ ++++ GY + +EA+AL + M G++
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKL 291
PN T +++ + + M KG + ++ +VN K G +A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 292 FDGMP----ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
+ M E V+ +N +I GL + H++DAL+LF+ ME +G+ PN VT+ ++S C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR-PNVVTYSSLISCLC 302
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDV 404
+ G + M I P + + ++D + GKL+EA++L M + P +
Sbjct: 303 NYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 405 VILGALL 411
V +L+
Sbjct: 362 VTYSSLI 368
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 46/265 (17%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSG----CLELGERIHEF------------ 259
++A+ALF MV P+ + +LSA A+ + LGE++
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 260 -------------------MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM----P 296
M G E ++ S+L+N Y + I+ A L D M
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 297 ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
+ N VT+N +I GL H +A++L + M +G P+ VT+ V++ C G D+
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ-PDLVTYGVVVNGLCKRGDTDLAF 241
Query: 357 DVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEA 413
++ M+ +EP + Y ++D L + + +A L K M K P+VV +L+
Sbjct: 242 NLLNKMEQG-KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 414 SKNIGN-TEVAKVVTEEI-LALEPD 436
N G ++ ++++++ I + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPD 325
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 17/236 (7%)
Query: 132 KHTFPFLLKACSSLTPALPVHKQVHAHVLKF------GLGLDSHVANGLVRCYSVSGDLV 185
KH FP ++ ++L +K+V + F GL ++ N L++ +GD
Sbjct: 390 KHCFPDVV-TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 186 DARFVFDEIPSR----SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVL 241
A+ +F E+ S ++ + T++ G +N +A+ +FE + EP T ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 242 SACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER--- 298
++G +E G + + +KGV+ V+ + +++ + + G+ A LF M E
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 299 -NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLD 353
N +N +I G E + L + M G A D + IG+++ H G LD
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA--GDASTIGLVTNMLHDGRLD 622
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 164/389 (42%), Gaps = 67/389 (17%)
Query: 129 LPGKHTFPFLLKACSSLTPAL----PVHK--QVHAHVLKFGLGLDSHVANGLVRCYSVSG 182
L KH F ++ C +L + P + +L G L+ +V N L+ + G
Sbjct: 195 LSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEG 254
Query: 183 DLVDARFVFDEIPSRSLS----LWTTMVCGYAQ--------------------------- 211
++ DA+ VFDEI RSL + T++ GY +
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 212 ----NFCSNEAL----ALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVK 263
C + LF+ M G PN +++ +R+G ++L + ++ M K
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 264 GVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMICGLATHGHVEDA 319
G++ ++L + LVN + KNG + AR + DGM R + +T+ +I G G VE A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 320 LSLFENMEKEGVAVPNDVTFIGVLSACC-HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCM 378
L + + M++ G+ + + V F ++ C G ++D R + ++ GI+P Y M
Sbjct: 435 LEIRKEMDQNGIEL-DRVGFSALVCGMCKEGRVIDAERALREMLRA--GIKPDDVTYTMM 491
Query: 379 VDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEIL--AL 433
+D + G +L+K M P VV LL +G + A ++ + +L +
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 434 EPDN---------HGVHVSLSNMYAEAGE 453
PD+ H H + S Y + E
Sbjct: 552 VPDDITYNTLLEGHHRHANSSKRYIQKPE 580
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 142/362 (39%), Gaps = 48/362 (13%)
Query: 83 GDLTHASRIFSSIH----QPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTF 135
G+++ A ++F I QP +NTLI + L M + P T+
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTY 313
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
L+ A H + + K GL + + L+ +S +G++ + + ++
Sbjct: 314 SALINALCKENKMDGAHG-LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 196 SRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
S+ L L+ T+V G+ +N A + +GM+ G P+ T +++ R G +E
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
I + M G+E+ + V ++ ++CG+
Sbjct: 433 TALEIRKEMDQNGIEL-------------------------------DRVGFSALVCGMC 461
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
G V DA M + G+ P+DVT+ ++ A C G G + M++ G P
Sbjct: 462 KEGRVIDAERALREMLRAGIK-PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS-DGHVPS 519
Query: 372 IEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTE 428
+ Y +++ L + G++ A L+ M PD + LLE N+ +
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKP 579
Query: 429 EI 430
EI
Sbjct: 580 EI 581
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 149/334 (44%), Gaps = 22/334 (6%)
Query: 118 SLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHK---QVHAHVLKFGLGLDSHVANGL 174
SL M+ G P +T+ L+ C + +H+ QV + G D N L
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGS----LHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 175 VRCYSVSGDLVDARFVFDEIP----SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGF 230
+ Y S +A V +E+ S S+ + +++ YA++ +EA+ L M +G
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 231 EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARK 290
+P+ T ++LS R+G +E I E MR G + + +A + MY G K
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 291 LFDGMP----ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
+FD + ++VTWN ++ +G + +F+ M++ G VP TF ++SA
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF-VPERETFNTLISAY 499
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP---WKPD 403
G + V+ M G+ P + Y ++ L RGG ++++++ M KP+
Sbjct: 500 SRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 404 VVILGALLEASKNIGNTEVAKVVTEEILA--LEP 435
+ +LL A N + + EE+ + +EP
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 139/315 (44%), Gaps = 15/315 (4%)
Query: 163 GLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTTMVCGYAQNFCS-NE 217
G LD + L+ ++ SG +A VF ++ +L + ++ + + N+
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
+L E M ++G P+ T ++++ C R + ++ E M+ G + +AL++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 278 MYAKNGAIAMARKLFDGMP----ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
+Y K+ A K+ + M ++VT+N +I A G +++A+ L M ++G
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK- 381
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
P+ T+ +LS G ++ +F M+ G +P I + + + G GK E +
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 394 LIKGMP---WKPDVVILGALLEA-SKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYA 449
+ + PD+V LL +N ++EV+ V E A +L + Y+
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 450 EAGEWQDVLRLRKTM 464
G ++ + + + M
Sbjct: 501 RCGSFEQAMTVYRRM 515
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 154/374 (41%), Gaps = 27/374 (7%)
Query: 83 GDLTHASRIFSSIH----QPNTFMWNTL--IRAQRHPQTALS-LYITMRRHGALPGKHTF 135
G T +IF I+ P+ WNTL + Q + +S ++ M+R G +P + TF
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 136 PFLLKA---CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD 192
L+ A C S A+ V++++ L G+ D N ++ + G + V
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRM----LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 193 EIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGF----EPNGATLASVLSACARSG 248
E+ C + + + + L + E + EP L +++ C++
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 249 CLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWN 304
L ER ++ +G + +++V++Y + +A A + D M ER ++ T+N
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 305 GMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKT 364
++ + + + + +G+ P+ +++ V+ A C + +F M+
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIK-PDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 365 VYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTE 421
GI P + Y + EA +++ M +P+ ++++ + +
Sbjct: 728 S-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 422 VAKVVTEEILALEP 435
AK+ E++ L+P
Sbjct: 787 EAKLFVEDLRNLDP 800
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 13/253 (5%)
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
A +F G+ +GF + + S++SA A SG + + M G + +I + ++N
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 278 MYAK-----NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
++ K N ++ K+ + T+N +I ++A +FE M+ G +
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAK 392
+ VT+ +L V M + G P I Y ++ R G L EA
Sbjct: 312 Y-DKVTYNALLDVYGKSHRPKEAMKVLNEM-VLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 393 ELIKGMP---WKPDVVILGALLEASKNIGNTEVAKVVTEEI--LALEPDNHGVHVSLSNM 447
EL M KPDV LL + G E A + EE+ +P N + M
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP-NICTFNAFIKM 428
Query: 448 YAEAGEWQDVLRL 460
Y G++ +++++
Sbjct: 429 YGNRGKFTEMMKI 441
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 275 LVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEG 330
+++M K G ++ A +F+G+ E +V ++ +I A G +A+++F+ ME++G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 331 VAVPNDVTFIGVLSACCHGGL-LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLL 389
P +T+ +L+ G + + MK+ GI P Y ++ RG
Sbjct: 239 CK-PTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITCCKRGSLHQ 296
Query: 390 EAKELIKGMP---WKPDVVILGALLEA-SKNIGNTEVAKVVTEEILALEPDNHGVHVSLS 445
EA ++ + M + D V ALL+ K+ E KV+ E +L + + SL
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 446 NMYAEAGEWQDVLRLRKTMKEERLK 470
+ YA G + + L+ M E+ K
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTK 381
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)
Query: 184 LVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSN----EALALFEGMVAEGFEPNGATLAS 239
L R + + + + L +T ++ FC + +AL + + + + + + L
Sbjct: 200 LAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLR 259
Query: 240 VLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN 299
+ C + L+ + +H + + + L+ MY+ G A +F+ M E+N
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 300 VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF 359
+ TW +I A +G EDA+ +F ++EG +P+ F G+ AC G +D G F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEG-NIPDGQLFRGIFYACGMLGDVDEGLLHF 378
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGN 419
SM YGI P IE Y +V++ G L EA E ++ MP +P+V + L+ S+ GN
Sbjct: 379 ESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGN 438
Query: 420 TEVAKVVTEEILALEP 435
E+ E + L+P
Sbjct: 439 LELGDYCAEVVEFLDP 454
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 138 LLKACSS---LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
L K C L A VH ++ A V L +HV L+ YS G +A VF+++
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLS-SNHV---LLEMYSNCGLANEAASVFEKM 315
Query: 195 PSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
++L W ++ +A+N +A+ +F EG P+G + AC G ++ G
Sbjct: 316 SEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL 375
Query: 255 RIHEFM-RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLAT 312
E M R G+ + +LV MYA G + A + + MP E NV W ++
Sbjct: 376 LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRV 435
Query: 313 HGHVE 317
HG++E
Sbjct: 436 HGNLE 440
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 11/260 (4%)
Query: 184 LVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSA 243
LVD+ F +P+ + ++ T++ G +N N AL +F M +G + T +++S
Sbjct: 171 LVDSMDGFGFVPN--VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 244 CARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----N 299
+ SG R+ M + ++ VI +AL++ + K G + AR L+ M R N
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 300 VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF 359
V T+N +I G HG + DA +F+ M +G P+ VT+ +++ C ++ G +F
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKG-CFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 360 CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALLEASKN 416
C M T G+ Y ++ + GKL A+++ M PD+V LL+ N
Sbjct: 348 CEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 417 IGNTEVAKVVTEEILALEPD 436
G E A V+ E++ E D
Sbjct: 407 NGKIEKALVMVEDLQKSEMD 426
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 131/299 (43%), Gaps = 46/299 (15%)
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS---LTPALP- 150
PN ++NT+I R AL ++ M + G T+ L+ S+ T A
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 151 ----VHKQVHAHVLKFGLGLDSHVA--------------------------NGLVRCYSV 180
V +++ +V+ F +D+ V N L+ + +
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 181 SGDLVDARFVFDEIPSR----SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGAT 236
G L DA+++FD + S+ + + T++ G+ ++ + + LF M +G + T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 237 LASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNG----AIAMARKLF 292
+++ ++G L + +++ M GV ++ + L++ NG A+ M L
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 293 DGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
+ +++T+N +I GL +++A LF ++ ++GV P+ + +I ++S C GL
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK-PDAIAYITMISGLCRKGL 479
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 176/400 (44%), Gaps = 35/400 (8%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
L+ S S H F L+R+ R P+ S+Y+ + LL++C
Sbjct: 79 LSVVSIFAKSNHIDKAFPQFQLVRS-RFPENKPSVYL-------------YNLLLESCIK 124
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS---- 200
+ ++ ++ G+ ++ N L+R S + AR +FDE+P +
Sbjct: 125 -ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF 183
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
+ +V GY + +++ L L M + G PN +++S+ R G + E++ E M
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFD--------GMPERNVVTWNGMICGLAT 312
R +G+ ++ ++ ++ K G + A ++F G+P N +T+N M+ G
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
G +EDA +LFE++ + I + HG ++ + T GI P I
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA--ETVLKQMTDKGIGPSI 361
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEE 429
Y ++D L + G L +AK ++ M PD V G LL ++G + AK + +E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 430 ILALE--PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
++ P+ + ++ L +++ + G + L + M E+
Sbjct: 422 MMRNNCLPNAYTCNILLHSLW-KMGRISEAEELLRKMNEK 460
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
++T++ G + EA LF M+ E +P+ + + G + R+ + M
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
KG + ++L+ I L D M E+ N+ T+N I L VE
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
DA +L + M ++ +A PN +F ++ A C D+ ++VF + ++ G + + Y
Sbjct: 647 DATNLLDEMMQKNIA-PNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSL 703
Query: 378 MVDLLGRGGKLLEAKELIKGM 398
M + L G+LL+A EL++ +
Sbjct: 704 MFNELLAAGQLLKATELLEAV 724
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 177/376 (47%), Gaps = 41/376 (10%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF 135
GD+ A + + Q P ++NT+I A ++ AL+L+ M G P T+
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 136 PFLLKAC--------SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDA 187
L++ +S + + ++++ +V+ F +D+ V G LV+A
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------EGKLVEA 345
Query: 188 RFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSA 243
++DE+ RS+ +++++ G+ + +EA +FE M+++ PN T +++
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 244 CARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK-----NGAIAMARKLFDG-MPE 297
++ ++ G + M +G+ + + L++ + + N I + + DG +P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 298 RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRD 357
++T++ ++ GL +G VE AL +FE +++ + P+ T+ ++ C G ++ G D
Sbjct: 466 --IMTYSILLDGLCNNGKVETALVVFEYLQRSKME-PDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 358 VFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEAS 414
+FCS+ ++ G++P + Y M+ R G EA L + M + PD L+ A
Sbjct: 523 LFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Query: 415 KNIGNTEVAKVVTEEI 430
G+ + + E+
Sbjct: 582 LRDGDKAASAELIREM 597
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 164/378 (43%), Gaps = 57/378 (15%)
Query: 96 HQPNTFMWNTLIRAQ-RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
+QP++F +NTLI RH + + ++ + R ++K C
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDR------------MVVKGC------------ 217
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMV---C 207
++ +G+ V NGL + GD+ A + ++ + ++ T++ C
Sbjct: 218 -QPDLVTYGI-----VVNGLCK----RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
Y N+AL LF M +G PN T S++ G R+ M + +
Sbjct: 268 NYKN---VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLF 323
V+ SAL++ + K G + A KL+D M +R ++ T++ +I G H +++A +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
E M + PN VT+ ++ C +D G ++F M + G+ Y ++
Sbjct: 385 ELMISKD-CFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFF 442
Query: 384 RGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDNH 438
+ + A+ + K M PD++ LL+ N G E A VV E + +EPD +
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 439 GVHVSLSNMYAEAGEWQD 456
++ + M +AG+ +D
Sbjct: 503 TYNIMIEGM-CKAGKVED 519
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 132/309 (42%), Gaps = 14/309 (4%)
Query: 116 ALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLV 175
A++L+ M + P F LL A + + + + + G+ + + + L+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 176 RCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS----NEALALFEGMVAEGFE 231
C+ L A V ++ + FC ++A++L MV G++
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 232 PNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA--- 288
P+ T +++ R + + M VKG + ++ +VN K G I +A
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 289 -RKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACC 347
+K+ G E VV +N +I L + +V DAL+LF M+ +G+ PN VT+ ++ C
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR-PNVVTYNSLIRCLC 302
Query: 348 HGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDV 404
+ G + M I P + + ++D + GKL+EA++L M + PD+
Sbjct: 303 NYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 405 VILGALLEA 413
+L+
Sbjct: 362 FTYSSLING 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 28/271 (10%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
++A+ LF MV P+ + +LSA A+ +L + E M+ G+ + S L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 276 VNMYAKNGAIAMARKLFDGM----PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+N + + +++A + M E ++VT N ++ G + DA+SL M + G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRD----VFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
P+ TF ++ GL R V G +P + YG +V+ L + G
Sbjct: 183 Q-PDSFTFNTLIH-----GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 388 LLEAKELIKGMPW---KPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV---- 440
+ A L+K M +P VVI +++A N N A + E+ DN G+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-----DNKGIRPNV 291
Query: 441 --HVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
+ SL G W D RL M E ++
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 162/353 (45%), Gaps = 29/353 (8%)
Query: 89 SRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CS- 143
++F +QPNT +NTLI A++L M G P T+ ++ C
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 144 -SLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS-- 200
+ AL + K++ ++ + + + + + L +V+ DA +F E+ ++ +
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN----DALNLFTEMDNKGIRPN 289
Query: 201 --LWTTMV---CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
+ +++ C Y + ++A L M+ PN T ++++ A + G L E+
Sbjct: 290 VVTYNSLIRCLCNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLA 311
+++ M + ++ + S+L+N + + + A+ +F+ M + NVVT+N +I G
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
VE+ + LF M + G+ V N VT+ ++ G D+ + +F M + G+ P
Sbjct: 407 KAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPD 464
Query: 372 IEHYGCMVDLLGRGGKLLEAK---ELIKGMPWKPDVVILGALLEASKNIGNTE 421
I Y ++D L + GKL +A E ++ +PD+ ++E G E
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 14/313 (4%)
Query: 97 QPNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHK 153
+PN +N+LIR + A L M P TF L+ A + K
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTTMVCGY 209
++ ++K + D + L+ + + L +A+ +F+ + S+ ++ + T++ G+
Sbjct: 347 -LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
+ E + LF M G N T +++ ++G ++ ++I + M GV +
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMP----ERNVVTWNGMICGLATHGHVEDALSLFEN 325
I S L++ K G + A +F+ + E ++ T+N MI G+ G VED LF +
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 326 MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRG 385
+ +GV PN + + ++S C GL + +F MK G P Y ++ R
Sbjct: 526 LSLKGVK-PNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRD 583
Query: 386 GKLLEAKELIKGM 398
G + ELIK M
Sbjct: 584 GDKAASAELIKEM 596
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 44/283 (15%)
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCY------SVSGDLVDARFVF 191
+L C LP+ V ++K G D + L+ Y S + LVD FV
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 192 DEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
+ P+ + T++ G + ++EA+AL + MVA G +P+ T +V++ + G ++
Sbjct: 180 EYQPNTVT--FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLA 311
L A+++ +K+ G E +VV + +I L
Sbjct: 238 L-------------------------------ALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 312 THGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPK 371
+ +V DAL+LF M+ +G+ PN VT+ ++ C+ G + M I P
Sbjct: 267 NYKNVNDALNLFTEMDNKGIR-PNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPN 324
Query: 372 IEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALL 411
+ + ++D + GKL+EA++L M + PD+ +L+
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 113/299 (37%), Gaps = 79/299 (26%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSG----CLELGERIHEF------------ 259
++A+ LF MV P+ +LSA A+ + LGER+
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 260 -------------------MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM----P 296
M G E ++ S+L+N Y I+ A L D M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 297 ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
+ N VT+N +I GL H +A++L + M G P+ T+ V++ C G +D+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ-PDLFTYGTVVNGLCKRGDIDLAL 240
Query: 357 ----------------------DVFCSMKTV------------YGIEPKIEHYGCMVDLL 382
D C+ K V GI P + Y ++ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 383 GRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPD 436
G+ +A L+ M + P+VV AL++A G A+ + +E++ +++PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 15/365 (4%)
Query: 114 QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANG 173
+ A+ + M+R P + LL + L V K+ ++ G N
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV-KRFFKDMIGAGARPTVFTYNI 267
Query: 174 LVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEG 229
++ C GD+ AR +F+E+ R L + +M+ G+ + ++ + FE M
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 230 FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMAR 289
EP+ T ++++ + G L +G + M+ G++ V+ S LV+ + K G + A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 290 KLFDGMPERNVV----TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
K + M +V T+ +I G++ DA L M + GV N VT+ ++
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW-NVVTYTALIDG 446
Query: 346 CCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL---IKGMPWKP 402
C + ++F M T G+ P + Y ++ + + A EL +KG KP
Sbjct: 447 LCDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 403 DVVILGALLEASKNIGNTEVAKVVTEEILALE-PDNHGVHVSLSNMYAEAGEWQDVLRLR 461
D+++ G + ++ E AKVV E+ N ++ +L + Y ++G + L L
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 462 KTMKE 466
MKE
Sbjct: 566 DEMKE 570
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 16/269 (5%)
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF-PFLLKACSSLTPALPVHK 153
PN +N LI ++ AL L ++ G P + F+ CS + K
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS--LEKIEAAK 527
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNF 213
V + + G+ +S + L+ Y SG+ + + DE+ + + C
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 214 CSN----EALALFEGMVAE-GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
C N +A+ F + + G + N A +++ + +E + E M KG+
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPE----RNVVTWNGMICGLATHGHVEDALSLFE 324
++L++ K G + A L D M E +++ + ++ GL+ ++ A S E
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLD 353
M EG+ P++V I VL G +D
Sbjct: 708 EMIGEGIH-PDEVLCISVLKKHYELGCID 735
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 131/253 (51%), Gaps = 13/253 (5%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVA 227
+ L+ + G L++A+ +++E+ +R ++ + +++ G+ + C +EA +F+ MV+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
+G EP+ T + ++++ ++ ++ G R+ + KG+ I + LV + ++G +
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 288 ARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
A++LF M R +VVT+ ++ GL +G + AL +FE M+K + + + I ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI-II 497
Query: 344 SACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP---W 400
C+ +D +FCS+ G++P + Y M+ L + G L EA L + M
Sbjct: 498 HGMCNASKVDDAWSLFCSLSD-KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 401 KPDVVILGALLEA 413
PD L+ A
Sbjct: 557 TPDDFTYNILIRA 569
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 162/405 (40%), Gaps = 59/405 (14%)
Query: 85 LTHASRIFSSIHQ----PNTFMWNTLIRA-QRHPQTALSLYIT--MRRHGALPGKHTFPF 137
+ A +F S+ Q P +N L A R Q L L M +G +T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 138 LLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD---EI 194
++ C L V K G D+ + LV + + G + +A + D E+
Sbjct: 111 MIN-CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 195 PSR-SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
R L +T++ G +EAL L + MV GF+P+ T VL
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL------------ 217
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN----VVTWNGMICG 309
N K+G A+A LF M ERN VV ++ +I
Sbjct: 218 -----------------------NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
L G +DALSLF ME +G+ + VT+ ++ C+ G D G + M I
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIK-ADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNII 312
Query: 370 PKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVV 426
P + + ++D+ + GKLLEAKEL M + PD + +L++ A +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 427 TEEILA--LEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
+ +++ EPD + L N Y +A D +RL + + + L
Sbjct: 373 FDLMVSKGCEPDIVTYSI-LINSYCKAKRVDDGMRLFREISSKGL 416
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 163/344 (47%), Gaps = 22/344 (6%)
Query: 85 LTHASRIFSSIHQPNTF-MWNTLIRAQRHPQTALSLYITMRRHGALP-GKHTFPFLLKAC 142
+++++ I Q + + M N+LI + R A + + R G P G F+L A
Sbjct: 169 FVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPSGVSAHGFVLDAL 227
Query: 143 ---SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF---VFDEIPS 196
+T AL H+ V + G+ + V GL SV V +R V D P+
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL----SVDQIEVASRLLSLVLDCGPA 283
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
++ + T++ G+ + + A LF+ M G EP+ ++++ ++G L +G ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM----PERNVVTWNGMICGLAT 312
KGV++ V++ S+ +++Y K+G +A A ++ M NVVT+ +I GL
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
G + +A ++ + K G+ P+ VT+ ++ C G L G ++ M + G P +
Sbjct: 404 DGRIYEAFGMYGQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPPDV 461
Query: 373 EHYGCMVDLLGRGGKLLEAKEL---IKGMPWKPDVVILGALLEA 413
YG +VD L + G +L A + G + +VV+ +L++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 124/275 (45%), Gaps = 27/275 (9%)
Query: 99 NTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKA-------CSSLTP 147
N ++N+LI R R + AL ++ M +G P TF +++ C + P
Sbjct: 495 NVVVFNSLIDGWCRLNRFDE-ALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP 553
Query: 148 --ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----L 201
L + + + + + + + V + L +C+ + DA F+ + +
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE----DASKFFNNLIEGKMEPDIVT 609
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+ TM+CGY +EA +FE + F PN TL ++ ++ ++ R+ M
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
KG + + L++ ++K+ I + KLF+ M E+ ++V+++ +I GL G V+
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
+A ++F + +P+ V + ++ C G L
Sbjct: 730 EATNIFHQ-AIDAKLLPDVVAYAILIRGYCKVGRL 763
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 28/279 (10%)
Query: 179 SVSGDLVD-ARFVFDEIPSRSLSLWTTMVCGYAQNFCS----NEALALFEGMVAEGFEPN 233
S++ DL+D A + E+ + + L V + + CS +A ++ M+ +GF P+
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 234 GATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFD 293
+T + VL+ + +EL + E M+ G+ V + +V+ + K G I ARK F+
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 294 GMPE----RNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
M E NVVT+ +I V A LFE M EG +PN VT+ ++ C
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG-CLPNIVTYSALIDGHCKA 601
Query: 350 GLLDVGRDVF---CSMKTVYGIE------------PKIEHYGCMVDLLGRGGKLLEAKEL 394
G ++ +F C K V ++ P + YG ++D + ++ EA++L
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 395 IKGMPW---KPDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ M +P+ ++ AL++ +G + A+ V E+
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 120/341 (35%), Gaps = 85/341 (24%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTF 135
G + A + F+ + + PN + LI A + A L+ TM G LP T+
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVR--CYSV-----SGDLVDAR 188
L+ D H G V C S D+ D
Sbjct: 592 SALI---------------------------DGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 189 FVFDEIPSRS----LSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSAC 244
F + S + + ++ G+ ++ EA L + M EG EPN +++
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 245 ARSGCLELGERIHEFMRVKGVEVGVILGSALVNMY------------------------- 279
+ G L+ + + M G + S+L++ Y
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 280 ----------AKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFEN 325
K G A KL M E+ NVVT+ MI G G +E L L E
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 326 MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
M +GVA PN VT+ ++ CC G LDV ++ MK +
Sbjct: 805 MGSKGVA-PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 163/344 (47%), Gaps = 22/344 (6%)
Query: 85 LTHASRIFSSIHQPNTF-MWNTLIRAQRHPQTALSLYITMRRHGALP-GKHTFPFLLKAC 142
+++++ I Q + + M N+LI + R A + + R G P G F+L A
Sbjct: 169 FVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPSGVSAHGFVLDAL 227
Query: 143 ---SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF---VFDEIPS 196
+T AL H+ V + G+ + V GL SV V +R V D P+
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL----SVDQIEVASRLLSLVLDCGPA 283
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
++ + T++ G+ + + A LF+ M G EP+ ++++ ++G L +G ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM----PERNVVTWNGMICGLAT 312
KGV++ V++ S+ +++Y K+G +A A ++ M NVVT+ +I GL
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
G + +A ++ + K G+ P+ VT+ ++ C G L G ++ M + G P +
Sbjct: 404 DGRIYEAFGMYGQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPPDV 461
Query: 373 EHYGCMVDLLGRGGKLLEAKEL---IKGMPWKPDVVILGALLEA 413
YG +VD L + G +L A + G + +VV+ +L++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 123/270 (45%), Gaps = 19/270 (7%)
Query: 97 QPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CSSLTP--ALP 150
+P+ + T++R + + AL L+ M + G P + L+ A C + P L
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMV 206
+ + + + + + + V + L +C+ + DA F+ + + + TM+
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIE----DASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
CGY +EA +FE + F PN TL ++ ++ ++ R+ M KG +
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSL 322
+ L++ ++K+ I + KLF+ M E+ ++V+++ +I GL G V++A ++
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLL 352
F + +P+ V + ++ C G L
Sbjct: 764 FHQ-AIDAKLLPDVVAYAILIRGYCKVGRL 792
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 151/355 (42%), Gaps = 35/355 (9%)
Query: 83 GDLTHASRIFSSIH----QPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF 135
GDL AS ++ + PN + LI+ A +Y + + G P T+
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 136 PFLLKA---CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFD 192
L+ C +L +++ + +K G D + LV S G ++ A
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDM----IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 193 EIPSRSLSL----WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSG 248
++ +S+ L + +++ G+ + +EAL +F M G +P+ AT +V+ G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 249 CLELGERIHEFMRV--KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGM 306
LE E + F R+ G+E + L++ + K+ + +LFD M +RN ++ +
Sbjct: 546 RLE--EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKISADIA 602
Query: 307 ICGLATH-----GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
+C + H +EDA F N+ EG P+ VT+ ++ C LD +F
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Query: 362 MK-TVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALLE 412
+K T +G P ++ +L + + A + M KP+ V G L++
Sbjct: 662 LKVTPFG--PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 145/291 (49%), Gaps = 22/291 (7%)
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMV 206
+ ++++ +V+ F + +DS V G +R +A + E+ R ++ +T+++
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLR---------EAEELHKEMIHRGIAPDTITYTSLI 375
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
G+ + ++A + + MV++G +PN T +++ ++ ++ G + M ++GV
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSL 322
+ + L+ + + G + +A++LF M R N+VT+ ++ GL +G E AL +
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
FE +EK + + + I ++ C+ +D D+FCS+ + G++P ++ Y M+ L
Sbjct: 496 FEKIEKSKMELDIGIYNI-IIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGGL 553
Query: 383 GRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ G L EA+ L + M PD L+ A G+ + + EE+
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 153/352 (43%), Gaps = 27/352 (7%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF-PFLLK 140
L R+ H+P+ NTL+ A+ L M +G P T+ P L
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 141 ACSSLTPALPVH--KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
C S AL + +++ +K S + +GL + G L +A +F+E+ +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK----HGSLDNAFNLFNEMEMKG 293
Query: 199 LSL----WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
++ + ++ G+ ++ L M+ PN T + ++ + + G L E
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGL 310
+H+ M +G+ I ++L++ + K + A ++ D M + N+ T+N +I G
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
++D L LF M GV V + VT+ ++ C G L+V +++F M + + P
Sbjct: 414 CKANRIDDGLELFRKMSLRGV-VADTVTYNTLIQGFCELGKLNVAKELFQEMVS-RKVPP 471
Query: 371 KIEHYGCMVDLL---GRGGKLLEAKELIKGMPWKPDV----VILGALLEASK 415
I Y ++D L G K LE E I+ + D+ +I+ + ASK
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 156/389 (40%), Gaps = 64/389 (16%)
Query: 89 SRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPA 148
SR+FS+I + + L+L M G +T ++ C
Sbjct: 92 SRLFSAIAKTKQY------------DLVLALCKQMELKGIAHNLYTLSIMIN-CFCRCRK 138
Query: 149 LPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTT 204
L + ++K G ++ + L+ + G + +A + D + L T
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
+V G + EA+ L + MV G +PN T VL
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL----------------------- 235
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMICGLATHGHVEDAL 320
N+ K+G A+A +L M ERN+ V ++ +I GL HG +++A
Sbjct: 236 ------------NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+LF ME +G+ N +T+ ++ C+ G D G + M I P + + ++D
Sbjct: 284 NLFNEMEMKGITT-NIITYNILIGGFCNAGRWDDGAKLLRDM-IKRKINPNVVTFSVLID 341
Query: 381 LLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEILA--LEP 435
+ GKL EA+EL K M + PD + +L++ + + A + + +++ +P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 436 DNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
+ ++ L N Y +A D L L + M
Sbjct: 402 NIRTFNI-LINGYCKANRIDDGLELFRKM 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 127/295 (43%), Gaps = 27/295 (9%)
Query: 191 FDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL 250
F R+LS + G + +++A+ LF M+ P + + SA A++
Sbjct: 46 FSAFSDRNLSYRERLRSGLV-DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 251 ELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMAR----KLFDGMPERNVVTWNGM 306
+L + + M +KG+ + S ++N + + + +A K+ E N +T++ +
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 307 ICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY 366
I GL G V +AL L + M + G P+ +T +++ C G + + Y
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHK-PDLITINTLVNGLCLSG-KEAEAMLLIDKMVEY 222
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM--------PWKPDVVILGAL----LEAS 414
G +P YG +++++ + G+ A EL++ M K ++I G L+ +
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 415 KNIGNTEVAKVVTEEILALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
N+ N K +T I+ + L + AG W D +L + M + ++
Sbjct: 283 FNLFNEMEMKGITTNIIT--------YNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 147/319 (46%), Gaps = 14/319 (4%)
Query: 123 MRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG 182
M+R G P + + ++ + L ++ + +++ G+ D+ V L+ + G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICK-LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 183 DLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLA 238
D+ A F E+ SR ++ +T ++ G+ Q EA LF M +G EP+ T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 239 SVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM--- 295
+++ ++G ++ R+H M G V+ + L++ K G + A +L M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 296 -PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDV 354
+ N+ T+N ++ GL G++E+A+ L E G+ + VT+ ++ A C G +D
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEMDK 544
Query: 355 GRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALL 411
+++ M G++P I + +++ G L + ++L+ M K P+ +L+
Sbjct: 545 AQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 412 EASKNIGNTEVAKVVTEEI 430
+ N + A + +++
Sbjct: 604 KQYCIRNNLKAATAIYKDM 622
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 14/273 (5%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
++T+V GY + ++ L E M +G +PN S++ R L E M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
+G+ ++ + L++ + K G I A K F M R +V+T+ +I G G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+A LF M +G+ P+ VTF +++ C G + V M G P + Y
Sbjct: 404 EAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTT 461
Query: 378 MVDLLGRGGKLLEAKELIKGMPWK----PDVVILGALLEASKNIGNTEVA-KVVTE-EIL 431
++D L + G L A EL+ M WK P++ +++ GN E A K+V E E
Sbjct: 462 LIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 432 ALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
L D + +L + Y ++GE + K M
Sbjct: 521 GLNADT-VTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 16/266 (6%)
Query: 83 GDLTHASRIFSSIH----QPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTF 135
GD+ A ++F + +P++ + LI H + A ++ M + G P T+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
L+ ++ +H + K GL + N +V SG++ +A + E
Sbjct: 460 TTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 196 SRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
+ L+ +TT++ Y ++ ++A + + M+ +G +P T +++ G LE
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMI 307
GE++ +M KG+ ++LV Y + A ++ M R V T+ ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 308 CGLATHGHVEDALSLFENMEKEGVAV 333
G ++++A LF+ M+ +G +V
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSV 664
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 147/319 (46%), Gaps = 14/319 (4%)
Query: 123 MRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG 182
M+R G P + + ++ + L ++ + +++ G+ D+ V L+ + G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICK-LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 183 DLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLA 238
D+ A F E+ SR ++ +T ++ G+ Q EA LF M +G EP+ T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 239 SVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM--- 295
+++ ++G ++ R+H M G V+ + L++ K G + A +L M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 296 -PERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDV 354
+ N+ T+N ++ GL G++E+A+ L E G+ + VT+ ++ A C G +D
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEMDK 544
Query: 355 GRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALL 411
+++ M G++P I + +++ G L + ++L+ M K P+ +L+
Sbjct: 545 AQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 412 EASKNIGNTEVAKVVTEEI 430
+ N + A + +++
Sbjct: 604 KQYCIRNNLKAATAIYKDM 622
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 14/273 (5%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
++T+V GY + ++ L E M +G +PN S++ R L E M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
+G+ ++ + L++ + K G I A K F M R +V+T+ +I G G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+A LF M +G+ P+ VTF +++ C G + V M G P + Y
Sbjct: 404 EAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTT 461
Query: 378 MVDLLGRGGKLLEAKELIKGMPWK----PDVVILGALLEASKNIGNTEVA-KVVTE-EIL 431
++D L + G L A EL+ M WK P++ +++ GN E A K+V E E
Sbjct: 462 LIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 432 ALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
L D + +L + Y ++GE + K M
Sbjct: 521 GLNADT-VTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 16/266 (6%)
Query: 83 GDLTHASRIFSSIH----QPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTF 135
GD+ A ++F + +P++ + LI H + A ++ M + G P T+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
L+ ++ +H + K GL + N +V SG++ +A + E
Sbjct: 460 TTLIDGLCKEGDLDSANELLH-EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 196 SRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
+ L+ +TT++ Y ++ ++A + + M+ +G +P T +++ G LE
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMI 307
GE++ +M KG+ ++LV Y + A ++ M R V T+ ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 308 CGLATHGHVEDALSLFENMEKEGVAV 333
G ++++A LF+ M+ +G +V
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSV 664
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 1/218 (0%)
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
EA+ + + + +G+ + L + C + LE +HE + V +A++
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 277 NMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPND 336
MY+ ++ A K+F+ MPE N T M+ +G+ E+A+ LF ++EG PN
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK-PNG 220
Query: 337 VTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
F V S C G + G F +M YGI P +EHY + +L G L EA ++
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVE 280
Query: 397 GMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
MP +P V + L+ S+ G+ E+ E + L+
Sbjct: 281 RMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 148 ALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVC 207
AL + VH ++ D N ++ YS + DA VF+E+P + M+
Sbjct: 134 ALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMR 193
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE-RIHEFMRVKGVE 266
+ N EA+ LF EG +PNG V S C +G ++ G + R G+
Sbjct: 194 CFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIV 253
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMP-ERNVVTWNGMICGLATHGHVEDALSLFEN 325
+ ++ M A +G + A + MP E +V W ++ HG VE E
Sbjct: 254 PSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAEL 313
Query: 326 MEKEGVAVPNDVTFIGVLSA 345
+EK + V+ G+++
Sbjct: 314 VEKLDATRLDKVSSAGLVAT 333
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
+A+ + + EG+ + L + C + L+ + +HEF+ + ++++
Sbjct: 164 KAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSII 223
Query: 277 NMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPND 336
MY+ G++ A +F+ MPERN+ TW G+I A +G EDA+ F ++EG P+
Sbjct: 224 EMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK-PDG 282
Query: 337 VTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
F + AC G ++ G F SM YGI P +EHY +V +L G L EA ++
Sbjct: 283 EMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE 342
Query: 397 GMPWKPDVVILGALLEASK 415
M +P+V + L+ S+
Sbjct: 343 SM--EPNVDLWETLMNLSR 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 12/175 (6%)
Query: 148 ALPVHKQVHAHVLKFGLGL-DSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMV 206
AL K VH + +G+ D N ++ YS G + DA VF+ +P R+L W ++
Sbjct: 196 ALQEAKVVHEFITS-SVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVI 254
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA-----RSGCLELGERIHEFMR 261
+A+N +A+ F EG +P+G + AC G L E+
Sbjct: 255 RCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGI 314
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHV 316
+ +E V +LV M A+ G + A + + M E NV W ++ HG +
Sbjct: 315 IPCMEHYV----SLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVHGDL 364
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 133/270 (49%), Gaps = 13/270 (4%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVA 227
+ L+ C+ G L +A + E+ R +S +T+++ G+ + ++A + + MV+
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
+G PN T +++ ++ ++ G + M ++GV + + L+ + + G + +
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 288 ARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
A++LF M R ++V++ ++ GL +G E AL +FE +EK + + + I ++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI-II 499
Query: 344 SACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW--- 400
C+ +D D+FCS+ + G++P ++ Y M+ L + G L EA L + M
Sbjct: 500 HGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 401 KPDVVILGALLEASKNIGNTEVAKVVTEEI 430
P+ L+ A G+ + + EEI
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 150/352 (42%), Gaps = 27/352 (7%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF-PFLLK 140
L R+ H+P N L+ A+ L M G P + T+ P L
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 141 ACSSLTPALPVH--KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
C S AL + +++ +K S + +GL + G L +A +F+E+ +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK----DGSLDNAFNLFNEMEIKG 277
Query: 199 LS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGE 254
++TT++ G+ ++ L M+ P+ ++++ + G L E
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 255 RIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGL 310
+H+ M +G+ + ++L++ + K + A + D M + N+ T+N +I G
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
++D L LF M GV V + VT+ ++ C G L+V +++F M + + P
Sbjct: 398 CKANLIDDGLELFRKMSLRGV-VADTVTYNTLIQGFCELGKLEVAKELFQEMVS-RRVRP 455
Query: 371 KIEHYGCMVDLLGRGG---KLLEAKELIKGMPWKPDV----VILGALLEASK 415
I Y ++D L G K LE E I+ + D+ +I+ + ASK
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 167/434 (38%), Gaps = 64/434 (14%)
Query: 85 LTHASRIFSSIHQPNTFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSS 144
L SR+FS + + + L L M G +T ++ C
Sbjct: 72 LIDFSRLFSVVARTKQY------------DLVLDLCKQMELKGIAHNLYTLSIMINCCCR 119
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLS 200
L + ++K G D+ + L+ + G + +A + D + +L
Sbjct: 120 -CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSG----CLELGERI 256
+V G N ++A+ L + MV GF+PN T VL +SG +EL ++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 257 HEF-------------------------------MRVKGVEVGVILGSALVNMYAKNGAI 285
E M +KG + +I+ + L+ + G
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 286 AMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIG 341
KL M +R +VV ++ +I G + +A L + M + G++ P+ VT+
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS-PDTVTYTS 357
Query: 342 VLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK 401
++ C LD + + G P I + +++ + + + EL + M +
Sbjct: 358 LIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 402 ---PDVVILGALLEASKNIGNTEVAKVVTEEILA--LEPDNHGVHVSLSNMYAEAGEWQD 456
D V L++ +G EVAK + +E+++ + PD + L + + GE +
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL-CDNGEPEK 475
Query: 457 VLRLRKTMKEERLK 470
L + + +++ +++
Sbjct: 476 ALEIFEKIEKSKME 489
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 55/297 (18%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV---------- 265
++A+ LF+ M P + + S AR+ +L + + M +KG+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 266 -------------------------EVGVILGSALVNMYAKNGAIAMARKLFDGMPER-- 298
E + S L+N G ++ A +L D M E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 299 --NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGR 356
++T N ++ GL +G V DA+ L + M + G PN+VT+ VL C G +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ-PNEVTYGPVLKVMCKSGQTALAM 232
Query: 357 DVFCSMKTVYGIEPKIE----HYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGA 409
++ M+ E KI+ Y ++D L + G L A L M +K D++I
Sbjct: 233 ELLRKME-----ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 410 LLEASKNIGN-TEVAKVVTEEI-LALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
L+ G + AK++ + I + PD +L + + + G+ ++ L K M
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS-ALIDCFVKEGKLREAEELHKEM 343
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 32/323 (9%)
Query: 96 HQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CSSLTPALPV 151
++P+T +NTLI+ + A+ L M +G P T+ ++ C S +L +
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 152 -------HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARF-VFDEIPSR----SL 199
+ V A V + +DS +G + DA +F E+ ++ S+
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCI----------DAAISLFKEMETKGIKSSV 263
Query: 200 SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEF 259
+ ++V G + N+ L + MV+ PN T +L + G L+ +++
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 260 MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGH 315
M +G+ +I + L++ Y ++ A + D M ++VT+ +I G
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
V+D + +F N+ K G+ V N VT+ ++ C G + + ++F M + +G+ P + Y
Sbjct: 384 VDDGMKVFRNISKRGL-VANAVTYSILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTY 441
Query: 376 GCMVDLLGRGGKLLEAKELIKGM 398
G ++D L GKL +A E+ + +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDL 464
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 15/323 (4%)
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
PN +N L+ + Q A LY M G P T+ L+ + L
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG-YCMQNRLSEANN 354
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCGYA 210
+ +++ D L++ Y + + D VF I R L ++ +V G+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI 270
Q+ A LF+ MV+ G P+ T +L +G LE I E ++ +++G++
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENM 326
+ + ++ K G + A LF +P + NV+T+ MI GL G + +A L M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
E++G A PND T+ ++ A G L + MK+ G ++D+L
Sbjct: 535 EEDGNA-PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC-GFSADASSIKMVIDMLLSAM 592
Query: 387 KLLEAKE-LIKGMPWKPDVVILG 408
K L + L KG + D++ L
Sbjct: 593 KRLTLRYCLSKGSKSRQDLLELS 615
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 136/323 (42%), Gaps = 48/323 (14%)
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTTMVCGY 209
V V+K G D+ N L++ + G + +A + D + + + ++V G
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
++ ++ AL L M + + T ++++ + R GC++ + + M KG++ V
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 270 ILGSALV-----------------------------------NMYAKNGAIAMARKLFDG 294
+ ++LV +++ K G + A +L+
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 295 MPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
M R N++T+N ++ G + +A ++ + M + + P+ VTF ++ C
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-PDIVTFTSLIKGYCMVK 382
Query: 351 LLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVIL 407
+D G VF ++ + G+ Y +V + GK+ A+EL + M PDV+
Sbjct: 383 RVDDGMKVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 408 GALLEASKNIGNTEVAKVVTEEI 430
G LL+ + G E A + E++
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDL 464
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
A+ LFE M ++G EP+ T ++ + G L+ + + M + G VI + L++
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 278 MYAKNGAIAMARKLFDGMP----ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
+ K A ++FD M RN VT+N +I GL VEDA L + M EG
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK- 537
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKE 393
P+ T+ +L+ C GG + D+ +M T G EP I YG ++ L + G++ A +
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 394 LIKGMPWK 401
L++ + K
Sbjct: 597 LLRSIQMK 604
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 18/267 (6%)
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CSS--LTPALPV 151
P+ +N+LI+ R+ + A+ L+ MR G P + T+ L+ + CS L AL +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP----SRSLSLWTTMVC 207
KQ+ G N L+ + + +A +FDE+ SR+ + T++
Sbjct: 458 LKQMELS----GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
G ++ +A L + M+ EG +P+ T S+L+ R G ++ I + M G E
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNVV----TWNGMICGLATHGHVEDALSLF 323
++ L++ K G + +A KL + + + +N +I GL +A++LF
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF 633
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGG 350
M ++ A P+ V++ V C+GG
Sbjct: 634 REMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 133/319 (41%), Gaps = 18/319 (5%)
Query: 125 RHGALPGKHTFPFLLKACSSLTPALPVHKQVHAH--VLKFGLGLDSHVANGLVRCYSVSG 182
+ G P ++TF L+ L A V + +L+ G D + N ++ G
Sbjct: 288 QDGFFPDQYTFNTLVNG---LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 183 DLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLA 238
++ +A V D++ +R S + T++ + EA L + ++G P+ T
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 239 SVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP-- 296
S++ + + + E MR KG E + L++ G + A + M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 297 --ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDV 354
R+V+T+N +I G +A +F+ ME GV+ N VT+ ++ C ++
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS-RNSVTYNTLIDGLCKSRRVED 523
Query: 355 GRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALL 411
+ M + G +P Y ++ RGG + +A ++++ M +PD+V G L+
Sbjct: 524 AAQLMDQM-IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 412 EASKNIGNTEVAKVVTEEI 430
G EVA + I
Sbjct: 583 SGLCKAGRVEVASKLLRSI 601
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+ ++ Y + NEA+ +F M G +P+ T +++ A++G L++ +++ M+
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
G+ S ++N K G + A KLF M ++ N+VT+N M+ A + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+AL L+ +M+ G P+ VT+ V+ H G L+ VF M+ I P YG
Sbjct: 522 NALKLYRDMQNAGFE-PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGL 579
Query: 378 MVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL 433
+VDL G+ G + +A + + M +P+V +LL + A + + +LAL
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+ ++ Y + NEA+ +F M G +P+ T +++ A++G L++ +++ M+
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
G+ S ++N K G + A KLF M ++ N+VT+N M+ A + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+AL L+ +M+ G P+ VT+ V+ H G L+ VF M+ I P YG
Sbjct: 522 NALKLYRDMQNAGFE-PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGL 579
Query: 378 MVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL 433
+VDL G+ G + +A + + M +P+V +LL + A + + +LAL
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+ ++ Y + NEA+ +F M G +P+ T +++ A++G L++ +++ M+
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
G+ S ++N K G + A KLF M ++ N+VT+N M+ A + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+AL L+ +M+ G P+ VT+ V+ H G L+ VF M+ I P YG
Sbjct: 522 NALKLYRDMQNAGFE-PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGL 579
Query: 378 MVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILAL 433
+VDL G+ G + +A + + M +P+V +LL + A + + +LAL
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 14/250 (5%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+ ++ Y + EA+ +F M G EP+ T +++ A++G L++ +++ M+
Sbjct: 397 YNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
G+ S ++N K G + A +LF M + N+VT+N MI A + E
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
AL L+ +M+ G P+ VT+ V+ H G L+ VF M+ + P YG
Sbjct: 517 TALKLYRDMQNAGFQ-PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGL 574
Query: 378 MVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
+VDL G+ G + +A + + M +P+V +LL + A + + +LAL
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL- 633
Query: 435 PDNHGVHVSL 444
G+H SL
Sbjct: 634 ----GLHPSL 639
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 140/291 (48%), Gaps = 22/291 (7%)
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMV 206
+ +++ +V+ F + +DS V G +R +A + E+ R ++ + +++
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLR---------EADQLLKEMMQRGIAPNTITYNSLI 375
Query: 207 CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVE 266
G+ + EA+ + + M+++G +P+ T +++ ++ ++ G + M ++GV
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 267 VGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSL 322
+ + LV + ++G + +A+KLF M R ++V++ ++ GL +G +E AL +
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
F +EK + + + I ++ C+ +D D+FCS+ + G++ Y M+ L
Sbjct: 496 FGKIEKSKMELDIGIYMI-IIHGMCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISEL 553
Query: 383 GRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEI 430
R L +A L + M + PD + L+ A + A + EE+
Sbjct: 554 CRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 23/331 (6%)
Query: 98 PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA---CSSLTPALPV 151
P +N L A + + L+L M G +T ++ C L+ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF-- 143
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTTMVC 207
++K G D+ + N L+ + + +A + D + +L T+V
Sbjct: 144 --STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
G N ++A+ L + MV GF+PN T VL+ +SG L + M + +++
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMP----ERNVVTWNGMICGLATHGHVEDALSLF 323
+ S +++ K+G++ A LF+ M + +++T+N +I G G +D L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
+M K ++ PN VTF ++ + G L + M GI P Y ++D
Sbjct: 322 RDMIKRKIS-PNVVTFSVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFC 379
Query: 384 RGGKLLEAKELIKGMPWK---PDVVILGALL 411
+ +L EA +++ M K PD++ L+
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 158/349 (45%), Gaps = 28/349 (8%)
Query: 97 QPNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CS--SLTPAL 149
+PN +N +I R R + + L M R G + T+ L+K C + AL
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVL-TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL----SLWTTM 205
+H A +L+ GL L+ +G++ A D++ R L +TT+
Sbjct: 331 VMH----AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV 265
V G++Q NEA + M GF P+ T ++++ +G +E + E M+ KG+
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 266 EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMICGLATHGHVEDALS 321
V+ S +++ + ++ + A ++ M E+ + +T++ +I G ++A
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDL 381
L+E M + G+ P++ T+ +++A C G L+ + M G+ P + Y +++
Sbjct: 507 LYEEMLRVGLP-PDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVLPDVVTYSVLING 564
Query: 382 LGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVT 427
L + + EAK L+ + ++ P V L+E N N E VV+
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE---NCSNIEFKSVVS 610
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 173/405 (42%), Gaps = 52/405 (12%)
Query: 84 DLTHASRIFSSIHQPNTFMWNT------LIRAQRH---PQTALSLYITMRRHGALPGKHT 134
D +AS +F S+ + ++T ++++ ALS+ + HG +PG +
Sbjct: 112 DDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 171
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEI 194
+ +L A + + V +L+ + + N L+R + +G++ A +FD++
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 195 PSR----SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCL 250
++ ++ + T++ GY + ++ L M +G EPN + V++ R G
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG-- 289
Query: 251 ELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGL 310
R+K EV +L M R+ + + VT+N +I G
Sbjct: 290 ----------RMK--EVSFVLTE-------------MNRRGY----SLDEVTYNTLIKGY 320
Query: 311 ATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEP 370
G+ AL + M + G+ P+ +T+ ++ + C G ++ + M+ V G+ P
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEFLDQMR-VRGLCP 378
Query: 371 KIEHYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALLEASKNIGNTEVAKVVT 427
Y +VD + G + EA +++ M + P VV AL+ G E A V
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 428 EEI--LALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
E++ L PD LS + + + + LR+++ M E+ +K
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSG-FCRSYDVDEALRVKREMVEKGIK 482
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 12/258 (4%)
Query: 218 ALALFEGMVAEGF-EPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
+L LF+ M + + +PN ++S R G L+ + + M +GV V +AL+
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 277 NMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHG-HVEDALSLFENMEKEGV 331
N Y +NG + +L D M +++T+N +I A G E L LF M EG+
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
P+ VT+ +LSAC GL D VF +M GI P + Y +V+ G+ +L +
Sbjct: 244 Q-PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 392 KELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEILALE-PDNHGVHVSLSNM 447
+L+ M PD+ LLEA G+ + A V ++ A N + L N+
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 448 YAEAGEWQDVLRLRKTMK 465
+ ++G + DV +L MK
Sbjct: 362 FGQSGRYDDVRQLFLEMK 379
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 150/368 (40%), Gaps = 26/368 (7%)
Query: 98 PNTFMWNTLI----RAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSL---TPALP 150
P+ +NT+I R + L L+ MR G P T+ LL AC+ A
Sbjct: 209 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 151 VHKQVHAHVLKFGLGLDSHVAN--GLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCG 208
V + ++ + L SH+ G +R DL+ +P ++ + ++
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD--ITSYNVLLEA 326
Query: 209 YAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
YA++ EA+ +F M A G PN T + +L+ +SG + ++ M+ +
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 269 VILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMICGLATHGHVEDALSLFE 324
+ L+ ++ + G LF M E N+ T+ G+I G EDA + +
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 325 NMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGR 384
M + VP+ + GV+ A L + F +M V G P IE + ++ R
Sbjct: 447 YMTANDI-VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV-GSNPSIETFHSLLYSFAR 504
Query: 385 GGKLLEAKELI-----KGMPWKPDVVILGALLEASKNIGNTE--VAKVVTEEILALEPDN 437
GG + E++ ++ G+P D A +EA K G E V V E +PD
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDT--FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 438 HGVHVSLS 445
+ LS
Sbjct: 563 RTLEAVLS 570
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 26/241 (10%)
Query: 190 VFDEIPS----RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA 245
VFDE+PS RS+ +T ++ Y +N +L L + M E P+ T +V++ACA
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 246 RSGCLELGERIHEF--MRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNVVTW 303
R G L+ + F MR +G++ ++ + L++ A G A +F M +
Sbjct: 223 RGG-LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND------ 275
Query: 304 NGMICGLATHGHVEDALSLFENMEK---------EGVAVPNDVTFIGVLSACCHGGLLDV 354
G++ L T+ H+ + +EK G ++P+ ++ +L A G +
Sbjct: 276 GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 355 GRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKEL---IKGMPWKPDVVILGALL 411
VF M+ G P Y +++L G+ G+ + ++L +K PD L+
Sbjct: 336 AMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Query: 412 E 412
E
Sbjct: 395 E 395
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 124/260 (47%), Gaps = 22/260 (8%)
Query: 88 ASRIFSSIH----QPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLK 140
A R+F + +P+ +NT+I+ Q A+ M G K T+ +++
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 141 AC---SSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
AC S + +++++ ++ S V GL + G L + VF+ + +
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK----EGKLNEGYTVFENMIRK 356
Query: 198 ----SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG 253
+++++T ++ GYA++ +A+ L M+ EGF+P+ T + V++ ++G +E
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPE----RNVVTWNGMICG 309
R G+ + + S+L++ K G + A +LF+ M E R+ +N +I
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 310 LATHGHVEDALSLFENMEKE 329
H V++A++LF+ ME+E
Sbjct: 477 FTKHRKVDEAIALFKRMEEE 496
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 22/322 (6%)
Query: 161 KFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCS----N 216
K+ L+ +V+ LV +++ D+ RFV EI + + ++F
Sbjct: 147 KYTHNLECYVS--LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 204
Query: 217 EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALV 276
E L ++ M G EP T +++ + ++ ER+ E M ++ ++ + ++
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMI 264
Query: 277 NMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVA 332
Y K G A + M R + +T+ MI ++L++ M+++G+
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 333 VPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAK 392
VP F V+ C G L+ G VF +M G +P + Y ++D + G + +A
Sbjct: 325 VPPH-AFSLVIGGLCKEGKLNEGYTVFENM-IRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 393 ELIKGM---PWKPDVVILGALLEASKNIGNTEVA----KVVTEEILALEPDNHGVHVSLS 445
L+ M +KPDVV ++ G E A + LA+ N + SL
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI---NSMFYSSLI 439
Query: 446 NMYAEAGEWQDVLRLRKTMKEE 467
+ +AG + RL + M E+
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEK 461
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 19/294 (6%)
Query: 117 LSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHA-HVLKFG-LGLDSHVANGL 174
L ++ M+ +G P +T+ FL+ + L A+ V V++ G + D N +
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLM---NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 175 VRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMV--CGYAQNFCSNEALALFEGMVAE 228
++ Y +G A ++ +R + TM+ C +F S +AL++ M +
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS--CVALYQEMDEK 321
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
G + + V+ + G L G + E M KG + V + + L++ YAK+G++ A
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 289 RKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLS 344
+L M + +VVT++ ++ GL +G VE+AL F +G+A+ N + + ++
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI-NSMFYSSLID 440
Query: 345 ACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
G +D +F M + G Y ++D + K+ EA L K M
Sbjct: 441 GLGKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
S+ +++ G+ +EA+AL + MV G++P+ T +++ + +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNG----AIAMARKLFDGMPERNVVTWNGMICGLATH 313
E M VKG + ++ A++N K G A+ + K+ G E +VV +N +I GL +
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
H++DA LF ME +G+ P+ T+ ++S C+ G + M I P +
Sbjct: 264 KHMDDAFDLFNKMETKGIK-PDVFTYNPLISCLCNYGRWSDASRLLSDMLE-KNINPDLV 321
Query: 374 HYGCMVDLLGRGGKLLEAK----ELIKGMPWKPDVVILGALLEA 413
+ ++D + GKL+EA+ E++K PDVV L++
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 10/229 (4%)
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
++ T++ G + ++A LF M +G +P+ T ++S G R+ M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-----NVVTWNGMICGLATHGH 315
K + ++ +AL++ + K G + A KL+D M + +VV +N +I G +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 316 VEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHY 375
VE+ + +F M + G+ V N VT+ ++ D + VF M + G+ P I Y
Sbjct: 372 VEEGMEVFREMSQRGL-VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTY 429
Query: 376 GCMVDLLGRGGKL---LEAKELIKGMPWKPDVVILGALLEASKNIGNTE 421
++D L G + L E ++ K D+V ++EA G E
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 127/300 (42%), Gaps = 47/300 (15%)
Query: 97 QPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF-PFLLKAC-------SSL 145
+ + ++NT+I +H A L+ M G P T+ P + C +S
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 146 TPALPVHKQVHAHVLKFGLGLDSHVANG-LVRCYSVSGDLVDARF--------------- 189
+ + K ++ ++ F +D+ V G LV + ++V ++
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 190 -----------VFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNG 234
VF E+ R L +TT++ G+ Q + A +F+ MV++G P+
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 235 ATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDG 294
T +L +G +E + E+M+ + +++ ++ + ++ K G + LF
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 295 MPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGG 350
+ + NVVT+ M+ G G E+A +LF M+++G +PN T+ ++ A G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG-PLPNSGTYNTLIRARLRDG 545
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 155/357 (43%), Gaps = 22/357 (6%)
Query: 123 MRRHGALPGKHTFPFLLKACSSLTPA---LPVHKQVHAHVLKFGLGLDSHVANGLVRCYS 179
MR+ P + L+ A S++ + L + +Q+ + G H+ L+R ++
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ----ELGYEPTVHLFTTLIRGFA 214
Query: 180 VSGDLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGA 235
G + A + DE+ S SL L+ + + + + A F + A G +P+
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 236 TLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGM 295
T S++ ++ L+ + E + + ++ Y G A L +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 296 PER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGL 351
+ +V+ +N ++ L G V++AL +FE M+K+ A PN T+ ++ C G
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYNILIDMLCRAGK 392
Query: 352 LDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILG 408
LD ++ SM+ G+ P + MVD L + KL EA + + M +K PD +
Sbjct: 393 LDTAFELRDSMQKA-GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 409 ALLEASKNIGNTEVAKVVTEEILALE-PDNHGVHVSLSNMYAEAGEWQDVLRLRKTM 464
+L++ +G + A V E++L + N V+ SL + G +D ++ K M
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+ ++ G+ + N+A L E M +GFEP T SV+ A+ L+ + E +
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
K +E+ V++ S+L++ + K G I A + + + ++ N+ TWN ++ L +
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+AL F++M KE PN VT+ +++ C + VF G++P Y
Sbjct: 710 EALVCFQSM-KELKCTPNQVTYGILINGLCKVRKFNKAF-VFWQEMQKQGMKPSTISYTT 767
Query: 378 MVDLLGRGGKLLEAKEL---IKGMPWKPDVVILGALLEASKN 416
M+ L + G + EA L K PD A++E N
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 9/276 (3%)
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
S++ MV G + E + + M F P + +++ A + ++ +
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMP----ERNVVTWNGMICGLATH 313
+ M+ G E V L + L+ +AK G + A L D M + ++V +N I
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
G V+ A F +E G+ P++VT+ ++ C LD ++F ++ + P
Sbjct: 252 GKVDMAWKFFHEIEANGLK-PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTY 309
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEI 430
Y M+ G GK EA L++ K P V+ +L + +G + A V EE+
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 431 LALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
N + L +M AG+ LR +M++
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 13/275 (4%)
Query: 202 WTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMR 261
+ TM+ GY +EA +L E A+G P+ +L+ + G ++ ++ E M+
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 262 VKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVE 317
K + + L++M + G + A +L D M + NV T N M+ L ++
Sbjct: 371 -KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 318 DALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGC 377
+A ++FE M+ + V P+++TF ++ G +D V+ M I +
Sbjct: 430 EACAMFEEMDYK-VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 378 MVDLLGRGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALE 434
+ + G K + ++ K M PD+ +L ++ G E + + EEI A
Sbjct: 489 IKNFFNHGRKE-DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 435 --PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEE 467
PD + + + +AG + L +MKE+
Sbjct: 548 FVPDARSYSILIHGL-IKAGFANETYELFYSMKEQ 581
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALAL 221
L+ + + L+ + G + +A + +E+ + L+ W +++ + NEAL
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 222 FEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAK 281
F+ M PN T +++ + + M+ +G++ I + +++ AK
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 282 NGAIAMARKLFD------GMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPN 335
G IA A LFD G+P+ +N MI GL+ DA SLFE + G+ + N
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDS--ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 169/392 (43%), Gaps = 20/392 (5%)
Query: 98 PNTFMWNTLIRAQRHP---QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQ 154
P+ +NTLI A + A L M G PG +T+ ++ K+
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK-HGKYERAKE 326
Query: 155 VHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTTMVCGYA 210
V A +L+ GL DS L+ GD+V+ VF ++ SR L +++M+ +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 211 QNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVI 270
++ ++AL F + G P+ ++ R G + + + M +G + V+
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 271 LGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENM 326
+ +++ K + A KLF+ M ER + T +I G G++++A+ LF+ M
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 327 EKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGG 386
+++ + + + VT+ +L G +D ++++ M + I P Y +V+ L G
Sbjct: 507 KEKRIRL-DVVTYNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISYSILVNALCSKG 564
Query: 387 KLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILA--LEPDNHGVH 441
L EA + M KP V+I ++++ GN + E++++ PD +
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 442 VSLSNMYAEAGEWQDVLRLRKTMKEERLKKVP 473
+ E L K M+EE+ VP
Sbjct: 625 TLIYGFVREEN-MSKAFGLVKKMEEEQGGLVP 655
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 167/433 (38%), Gaps = 75/433 (17%)
Query: 99 NTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPAL------ 149
N +++ LIR R + A + +R G F + AC++L +L
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKG-------FTVSIDACNALIGSLVRIGWV 216
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTTM 205
+ V+ + + G+G++ + N +V G + ++ + + + T+
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV 265
+ Y+ EA L M +GF P T +V++ + G E + + M G+
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 266 EVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMICGLATHGHVEDALS 321
+L+ K G + K+F M R+V V ++ M+ G+++ AL
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVF-------CSMKTVYGIEPKIEH 374
F ++++ G+ +P++V + ++ C G++ V ++ C+M V I H
Sbjct: 397 YFNSVKEAGL-IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV--TYNTILH 453
Query: 375 YGCMVDLLGRGGKLL-----------------------------EAKELIKGMPWKP--- 402
C +LG KL A EL + M K
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 403 DVVILGALLEASKNIGNTEVAK-----VVTEEILALEPDNHGVHVSLSNMYAEAGEWQDV 457
DVV LL+ +G+ + AK +V++EIL P ++ + L N G +
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP-TPISYSI---LVNALCSKGHLAEA 569
Query: 458 LRLRKTMKEERLK 470
R+ M + +K
Sbjct: 570 FRVWDEMISKNIK 582
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 153/376 (40%), Gaps = 23/376 (6%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWNT---LIRAQRHPQTALSLYITMRRHGALPGKHTF 135
GD+ ++FS + P+ +++ L + AL + +++ G +P +
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
L++ + V + +L+ G +D N ++ L +A +F+E+
Sbjct: 414 TILIQGYCR-KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 196 SRSL----SLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
R+L T ++ G+ + A+ LF+ M + + T ++L + G ++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERN----VVTWNGMI 307
+ I M K + I S LVN G +A A +++D M +N V+ N MI
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 308 CGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVY- 366
G G+ D S E M EG VP+ +++ ++ + + M+
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGF-VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 367 GIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVA 423
G+ P + Y ++ R ++ EA+ +++ M + PD ++ + N A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 424 KVVTEEIL--ALEPDN 437
+ +E+L PD+
Sbjct: 712 FRIHDEMLQRGFSPDD 727
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 29/386 (7%)
Query: 102 MWNTLIRAQRHPQT---ALSLYITMRRHGALPGKHTFPFLLK---ACSSLTPALPVHKQV 155
++ +I + Q+ ++S + M +G +PG + F +LL SS +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 156 HAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCGYAQ 211
+ V+ LD + L++ +G++ + + E+ S ++TT++ G +
Sbjct: 156 KSKVV-----LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 212 NFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVIL 271
+A LF M G N T +++ ++G + G ++E M+ GV +
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENME 327
+ ++N K+G A ++FD M ER N+VT+N +I GL + +A + + M+
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 328 KEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
+G+ PN +T+ ++ C G L + +K+ G+ P + Y +V R G
Sbjct: 331 SDGIN-PNLITYNTLIDGFCGVGKLGKALSLCRDLKS-RGLSPSLVTYNILVSGFCRKGD 388
Query: 388 LLEAKELIKGMP---WKPDVVILGALLEASKNIGNTEVA---KVVTEEILALEPDNHGVH 441
A +++K M KP V L++ N E A ++ EE L L PD H
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE-LGLVPDVHTYS 447
Query: 442 VSLSNMYAEAGEWQDVLRLRKTMKEE 467
V L + + G+ + RL K+M E+
Sbjct: 448 V-LIHGFCIKGQMNEASRLFKSMVEK 472
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 19/264 (7%)
Query: 98 PNTFMWNTLIR---AQRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CS--SLTPALPV 151
PN + +N ++ + A ++ MR G T+ L+ C L A V
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 152 HKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVC 207
Q+ + G+ + N L+ + G L A + ++ SR LS + +V
Sbjct: 326 VDQMKSD----GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 208 GYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEV 267
G+ + ++ A + + M G +P+ T ++ ARS +E ++ M G+
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 268 GVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMICGLATHGHVEDALSLF 323
V S L++ + G + A +LF M E+N V +N MI G G AL L
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 324 ENMEKEGVAVPNDVTFIGVLSACC 347
+ ME++ +A PN ++ ++ C
Sbjct: 502 KEMEEKELA-PNVASYRYMIEVLC 524
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 28/311 (9%)
Query: 166 LDSHVANGLVRCYSVSGDLVDARFVFDEI----PSRSLSLWTTMVCGYAQNFCS-NEALA 220
LD ++ YS +G A +F+ + PS +L + ++ + + S + L
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 221 LFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYA 280
+ + M ++G + + T ++VLSACAR G L + ++ G E G + +AL+ ++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 281 KNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPND 336
K G A + M E + VT+N ++ G ++A + E M K+GV +PN
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV-MPNA 386
Query: 337 VTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIK 396
+T+ V+ A G D +F SMK G P Y ++ LLG+ + E +++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 397 GMP---WKPDVVILGALLEASKNIGNTEVAKVVTEEILA--LEPDNH------------G 439
M P+ +L N G + V E+ + EPD G
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 440 VHVSLSNMYAE 450
V S MY E
Sbjct: 506 SEVDASKMYGE 516
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 219 LALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHE-FMRVKGVEVGVILGSALVN 277
++L +G+ G L L + SG L+L ++ E F+R+ G E + + L++
Sbjct: 140 VSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLD 199
Query: 278 -------------------MYAKNGAIAMARKLFDGM----PERNVVTWNGMICGLATHG 314
Y++ G A LF+ M P +VT+N ++ G
Sbjct: 200 KIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG 259
Query: 315 HV-EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
L + + M +G+ ++ T VLSAC GLL ++ F +K+ G EP
Sbjct: 260 RSWRKILGVLDEMRSKGLKF-DEFTCSTVLSACAREGLLREAKEFFAELKSC-GYEPGTV 317
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWKP---DVVILGALLEASKNIGNTEVAKVVTEEI 430
Y ++ + G+ G EA ++K M D V L+ A G ++ A V E +
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 431 L--ALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKE 466
+ P N + ++ + Y +AG+ + L+L +MKE
Sbjct: 378 TKKGVMP-NAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 136/350 (38%), Gaps = 60/350 (17%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWN---TLIRAQRHPQTALSLYITMRRHGALPGKHTF 135
G A ++F S+ + PNT +N +L+ + + + M+ +G P + T+
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
+L C + V++ V + G D N L+ Y G VDA ++ E
Sbjct: 460 NTMLALCGNKGMDKFVNR-VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE-- 516
Query: 196 SRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGER 255
M GF T ++L+A AR G GE
Sbjct: 517 -----------------------------MTRAGFNACVTTYNALLNALARKGDWRSGEN 547
Query: 256 IHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPE----------RNVVTWNG 305
+ M+ KG + S ++ YAK G ++ + + E R ++ N
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 306 MICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTV 365
LA E A +LF +K G P+ V F +LS + D + S++
Sbjct: 608 KCRALAGS---ERAFTLF---KKHGYK-PDMVIFNSMLSIFTRNNMYDQAEGILESIRED 660
Query: 366 YGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALLE 412
G+ P + Y ++D+ R G+ +A+E++K + KPD+V +++
Sbjct: 661 -GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 13/222 (5%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
N+A A++E M+ G P T ++L +C ++G LE ++I M+ + +E + + L
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 276 VNMYAKNGAIAMARKLFDGMPERNVV----TWNGMICGLATHGHVEDALSLFENMEKEGV 331
+N ++KNG + AR+ M ++N +I G G +DA + + M G+
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
P T+ + A C G +D R++ SM P + Y ++ + GK +EA
Sbjct: 340 -YPTTSTYNIYICALCDFGRIDDARELLSSMAA-----PDVVSYNTLMHGYIKMGKFVEA 393
Query: 392 KELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
L + P +V L++ GN E A+ + EE+
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 143/339 (42%), Gaps = 58/339 (17%)
Query: 182 GDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVL 241
G + DAR + + + + + T++ GY + EA LF+ + A P+ T +++
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 242 SACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER--- 298
SG LE +R+ E M + + VI + LV + KNG ++MA +++D M +
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 299 -------------------------------------NVVTWNGMICGLATHGHVEDALS 321
++ +N I GL G++ A+
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 322 LFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSM--KTVYGIEPKIEHYGCMV 379
+ + G+ VP+ VT+ V+ G + R+++ M K +Y P + Y ++
Sbjct: 537 FQRKIFRVGL-VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY---PSVITYFVLI 592
Query: 380 DLLGRGGKLLEAKEL---IKGMPWKPDVVILGALLEASKNIGNTEVA-----KVVTEEIL 431
+ G+L +A + +K +P+V+ ALL GN + A K+ E I
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI- 651
Query: 432 ALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
P N + L + + +W++V++L K M ++ ++
Sbjct: 652 ---PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 164/385 (42%), Gaps = 61/385 (15%)
Query: 100 TFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHA-- 157
T + N LI R PQ A S++ T+ G P T+ ++L AL K H+
Sbjct: 323 TKLMNGLIERGR-PQEAHSIFNTLIEEGHKPSLITY-------TTLVTALTRQKHFHSLL 374
Query: 158 ----HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR----SLSLWTTMVCGY 209
V K GL D+ + N ++ S SG+L A +F+++ + S + T++ GY
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 210 AQNFCSNEALALFEGMVA-EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
+ E+ L + M+ E +PN T ++ A +E I M+ GV+
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 269 VILGSALVNMYAKNGAIAMAR-----KLFDGMPERNVVTWNGMICGLATHGHVEDALSLF 323
V+ + L YA+ G+ A ++ + NV T ++ G G +E+AL F
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 324 ENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLG 383
M++ GV PN F ++ G L++ ++ G +VDL+
Sbjct: 555 YRMKELGVH-PNLFVFNSLIK-----GFLNIN---------------DMDGVGEVVDLME 593
Query: 384 RGGKLLEAKELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPDNHGVH 441
G KPDVV L+ A ++G+ + + + ++L ++PD H
Sbjct: 594 EFGV-------------KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 442 VSLSNMYAEAGEWQDVLRLRKTMKE 466
+ L+ YA AGE + ++ M++
Sbjct: 641 I-LAKGYARAGEPEKAEQILNQMRK 664
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 149/357 (41%), Gaps = 24/357 (6%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWNTLIRAQ----RHPQTALSLYITMRRHGALPGKHT 134
G+L A +IF + + P +NTLI+ + +++ L + +R P T
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRT 462
Query: 135 FPFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSG------DLVDAR 188
L++A + V+ + +G+ D N L + Y+ G D++ R
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVY-KMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 189 FVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSG 248
+ +++ ++ T+V GY + EAL F M G PN S++
Sbjct: 522 MLHNKVKP-NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 249 CLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPE----RNVVTWN 304
++ + + M GV+ V+ S L+N ++ G + +++ M E ++ ++
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 305 GMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKT 364
+ G A G E A + M K GV PN V + ++S C G + V+ M
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVR-PNVVIYTQIISGWCSAGEMKKAMQVYKKMCG 699
Query: 365 VYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIG 418
+ G+ P + Y ++ G + +A+EL+K M K P + + + K+IG
Sbjct: 700 IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 16/279 (5%)
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLD----SHVANGLVRCYSVSGDLVDARFVFDEIPSR 197
CS AL V ++KFG D S + NG + V D +D +E+ R
Sbjct: 117 CSRFVIAL----SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF-DAIDLVSKMEEMGFR 171
Query: 198 -SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
+ ++ T++ G + N+A+ LF+ M +G + T S+++ SG R+
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLAT 312
M ++ + VI +A+++++ K G + A KL++ M R +V T+N +I GL
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
HG V++A + + M +G +P+ VT+ +++ C +D G +F M G+
Sbjct: 292 HGRVDEAKQMLDLMVTKG-CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDT 349
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALL 411
Y ++ + G+ A+E+ M +P++ LL
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 148/340 (43%), Gaps = 37/340 (10%)
Query: 85 LTHASRIFSSIH----------QPNTFMWNTLIRAQRH---PQTALSLYITMRRHGALPG 131
+R+F +I +P+ ++NT+I A+ L+ M R G
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 132 KHTFPFLLKA--CSSLTPALP------VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGD 183
T+ L+ CS V + + +V+ F +D V G
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK---------EGK 259
Query: 184 LVDARFVFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLAS 239
+A +++E+ R + + +++ G + +EA + + MV +G P+ T +
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 240 VLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER- 298
+++ +S ++ G ++ M +G+ I + ++ Y + G A+++F M R
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 299 NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
N+ T++ ++ GL + VE AL LFENM+K + + + T+ V+ C G ++ D+
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL-DITTYNIVIHGMCKIGNVEDAWDL 438
Query: 359 FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
F S+ + G++P + Y M+ R + ++ L + M
Sbjct: 439 FRSL-SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 9/221 (4%)
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
S+ +++ G+ +EA+AL + MV G++P+ T +++ + +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNG----AIAMARKLFDGMPERNVVTWNGMICGLATH 313
E M VKG + ++ A++N K G A+ + K+ G E +VV ++ +I L +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
HV+DAL+LF M+ +G+ P+ T+ ++S C+ G + M I P +
Sbjct: 254 RHVDDALNLFTEMDNKGIR-PDVFTYSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVV 311
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALL 411
+ ++D + GKL+EA++L M + P++V +L+
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 12/265 (4%)
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
+++T++ + ++AL LF M +G P+ T +S++S G R+ M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHV 316
+ + V+ ++L++ +AK G + A KLFD M +R N+VT+N +I G H +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
++A +F M + +P+ VT+ +++ C + G ++F M + G+ Y
Sbjct: 362 DEAQQIFTLMVSKD-CLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNTVTYT 419
Query: 377 CMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEIL-- 431
++ + A+ + K M P+++ LL+ G E A VV E +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 432 ALEPDNHGVHVSLSNMYAEAGEWQD 456
+EPD + ++ +S +AG+ +D
Sbjct: 480 KMEPDIYTYNI-MSEGMCKAGKVED 503
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 18/318 (5%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF 135
G + ASR+ S + + PN +N+LI A + A L+ M + P T+
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 136 PFLLKACSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP 195
L+ + L +Q+ ++ D N L+ + + +VD +F ++
Sbjct: 349 NSLING-FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 196 SRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
R L +TT++ G+ Q + A +F+ MV++G PN T ++L ++G LE
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMI 307
+ E+++ +E + + + K G + LF + + +V+ +N MI
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 308 CGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYG 367
G G E+A +LF M+++G +P+ T+ ++ A G ++ M++
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDG-PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR- 585
Query: 368 IEPKIEHYGCMVDLLGRG 385
YG + D+L G
Sbjct: 586 FAGDASTYGLVTDMLHDG 603
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
+EA+ LF MV P+ + +LSA A+ +L E M + GV + + +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 276 VNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+N + ++ A + M + ++VT N ++ G + +A++L + M + G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRD----VFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
P+ VTF ++ GL + V G +P + YG +++ L + G+
Sbjct: 167 Q-PDTVTFTTLVH-----GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 388 LLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV---- 440
A L+ M + DVVI ++++ + + A + E+ DN G+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-----DNKGIRPDV 275
Query: 441 --HVSLSNMYAEAGEWQDVLRLRKTMKEERL 469
+ SL + G W D RL M E ++
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 18/296 (6%)
Query: 116 ALSLYITMRRHGALPGKHTFPFLLKA---CSSLTPALPVHKQVHAHVLKFGLGLDSHVAN 172
A L MR+ G +P +F L+ A LTP L V ++ V GL D+ N
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV--ELLDMVRNSGLRPDAITYN 301
Query: 173 GLVRCYSVSGDLVDARFVFDEIPSRSLS--LWT--TMVCGYAQNFCSNEALALFEGMVAE 228
L+ S +L A VF+++ + LWT M+ Y + + EA LF + +
Sbjct: 302 TLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK 361
Query: 229 GFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMA 288
GF P+ T S+L A AR E + +++ M+ G + + +++MY K G + +A
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 289 RKLF---DGMPERN--VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
+L+ G+ RN +T+ +I L +A +L M G+ P T+ ++
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK-PTLQTYSALI 480
Query: 344 SACCHGGLLDVGRDVF-CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
G + D F C +++ G +P Y M+D+L RG + +A L + M
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRS--GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 21/294 (7%)
Query: 188 RFVFDEIPSRSLSLWTTMVCGYAQNFCS---NEALALFEGM-VAEGFEPNGATLASVLSA 243
+FV D + +R + + T C ++ AL +FE + + PN +A++L
Sbjct: 141 QFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGV 200
Query: 244 CARSGCLELGERIHEFMRVKGVEVG--VILGSALVNMYAKNGAIAMARKLFDGMPER--- 298
R L I F R + VG V + +A++ +Y+++G + A++L D M +R
Sbjct: 201 LGRWNQESLAVEI--FTRAEPT-VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV 257
Query: 299 -NVVTWNGMICGLATHGHVED--ALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVG 355
+++++N +I G + A+ L + + G+ P+ +T+ +LSAC LD
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR-PDAITYNTLLSACSRDSNLDGA 316
Query: 356 RDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLE 412
VF M+ + +P + Y M+ + GR G EA+ L + K PD V +LL
Sbjct: 317 VKVFEDME-AHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 413 ASKNIGNTEVAKVVTEEILALE-PDNHGVHVSLSNMYAEAGEWQDVLRLRKTMK 465
A NTE K V +++ + + + ++ +MY + G+ L+L K MK
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 134/318 (42%), Gaps = 59/318 (18%)
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAEG----------------------------- 229
L W +++ YAQ C A A+F M+ +G
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 230 ------FEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNG 283
F+ + +++ +L A AR+G + ++I+ M+ G + L ++ + K
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 284 AIAMARKLFDGMPERN----VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF 339
+ A + M E N + WN M+ + + +++ +++ G+ P++ T+
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLE-PDETTY 965
Query: 340 IGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELI---- 395
++ C + G + M+ + G++PK++ Y ++ G+ L +A++L
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNL-GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 396 -KGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGVHVSLSNM------Y 448
KG+ K D +++ S++ G+ A E++L + N G+ +L+ M Y
Sbjct: 1025 SKGL--KLDRSFYHTMMKISRDSGSDSKA----EKLLQMMK-NAGIEPTLATMHLLMVSY 1077
Query: 449 AEAGEWQDVLRLRKTMKE 466
+ +G Q+ ++ +K+
Sbjct: 1078 SSSGNPQEAEKVLSNLKD 1095
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 101/237 (42%), Gaps = 10/237 (4%)
Query: 170 VANGLVRCYSVSGDLVDARFVFDEIPSRSL----SLWTTMVCGYAQNFCSNEALALFEGM 225
+ N +++ Y+ D V+ I L + + T++ Y ++ E L + M
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 226 VAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAI 285
G +P T S++SA + CLE E++ E + KG+++ ++ + +G+
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 286 AMARKLFDGMP----ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIG 341
+ A KL M E + T + ++ ++ G+ ++A + N++ V + + +
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTT-LPYSS 1107
Query: 342 VLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
V+ A + G + MK G+EP + C V + +E L+K +
Sbjct: 1108 VIDAYLRSKDYNSGIERLLEMKK-EGLEPDHRIWTCFVRAASFSKEKIEVMLLLKAL 1163
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 9/237 (3%)
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
++ T++ + N AL + + M G P+ T S+++ SG + RI M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 261 RVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHV 316
G+ VI SAL+++Y K G + A+K ++ M +R N+VT+N +I GL HG +
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 317 EDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYG 376
++A + + +G PN VT+ +++ C +D G + C M + G++ Y
Sbjct: 306 DEAKKVLNVLVSKGF-FPNAVTYNTLINGYCKAKRVDDGMKILCVM-SRDGVDGDTFTYN 363
Query: 377 CMVDLLGRGGKLLEAKELIKGMP---WKPDVVILGALLEASKNIGNTEVAKVVTEEI 430
+ + GK A++++ M PD+ LL+ + G A V E++
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 139/321 (43%), Gaps = 48/321 (14%)
Query: 96 HQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVH 152
++PN ++NT+I + + TAL + M++ G P T+ L+ + V
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH-SGTWGVS 238
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCG 208
++ + +++ G+ D + L+ Y G L++A+ ++E+ RS++ + +++ G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 209 YAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVG 268
+ +EA + +V++GF PN T ++++ ++ ++ G +I M GV+
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 269 VILGSALVNMYAKNGAIAMARK-------------------LFDGMPERN---------- 299
+ L Y + G + A K L DG+ +
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 300 ----------VVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHG 349
++T+N +I GL VEDA LF ++ +GV+ P+ +T+I ++
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS-PDVITYITMMIGLRRK 477
Query: 350 GLLDVGRDVFCSMKTVYGIEP 370
L +++ M+ G+ P
Sbjct: 478 RLWREAHELYRKMQKEDGLMP 498
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 162/352 (46%), Gaps = 22/352 (6%)
Query: 97 QPNTFMWNTLIRAQ---RHPQTALSLYITMRRHGALPGKHTFPFLLKAC---SSLTPALP 150
+PN +N ++ A ++ A S++ M G P T+ L+ A
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVS-GDLVDARFVFDEIPSRSLSLWTTMVCGY 209
V Q++A + + + + NGL + S + + ++ S S + + +++ G+
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELG-ERIHEFMRVKGVEVG 268
+ ++ A+ + M G PN T S+++ +S ++L E HE +K +E+
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE---MKSMELK 657
Query: 269 VILGS--ALVNMYAKNGAIAMARKLFDGMPE----RNVVTWNGMICGLATHGHVEDALSL 322
+ L + AL++ + K + A LF +PE NV +N +I G G ++ A+ L
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 323 FENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLL 382
++ M +G++ + T+ ++ G +++ D++ + + GI P + +V+ L
Sbjct: 718 YKKMVNDGISC-DLFTYTTMIDGLLKDGNINLASDLYSELLDL-GIVPDEILHMVLVNGL 775
Query: 383 GRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEIL 431
+ G+ L+A ++++ M K P+V++ ++ GN A + +E+L
Sbjct: 776 SKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEML 827
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 158/393 (40%), Gaps = 33/393 (8%)
Query: 83 GDLTHASRIFSSIHQPNTFMW--NTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLK 140
+L +S+ F P F + N IR +R A+ + M +P P++
Sbjct: 154 NNLVDSSKRFGFELTPRAFNYLLNAYIRNKRM-DYAVDCFGLMVDRKVVP---FVPYVNN 209
Query: 141 ACSSLTPA--LPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRS 198
SSL + + K+++ ++ G+ D+ L+R +A +F + SR
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 199 LSLWTTMVCGYAQNFCSNEALALFEGMVAE-----GFEPNGATLASVLSACARSGCLELG 253
+ Q C L + ++ E G + T SV+ A + G +E
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 254 ERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV----VTWNGMICG 309
R+ + M G+ + VI ++LVN Y K + A LF+ M E + V ++ M+
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Query: 310 LATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIE 369
+ +E A+ + M+ +A P+ V ++ C + ++F E
Sbjct: 390 FCKNMEMEKAIEFYMRMKSVRIA-PSSVLVHTMIQGCLKAESPEAALEIFND-----SFE 443
Query: 370 PKIEHYGCMVD----LLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEV 422
I H G M + L + GK+ A +K M K P+VV ++ A + N ++
Sbjct: 444 SWIAH-GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDL 502
Query: 423 AKVVTEEIL--ALEPDNHGVHVSLSNMYAEAGE 453
A+ + E+L LEP+N + + + E
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 114 QTALSLYITMRRHGALPGKHTFPFLLKA-CSS--LTPALPVHKQVHAHVLKFGLGLDSHV 170
+A+ Y M +G P TF L+ C S + AL + ++ + LK LD
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK----LDLPA 662
Query: 171 ANGLVRCYSVSGDLVDARFVFDEIPSRSL----SLWTTMVCGYAQNFCSNEALALFEGMV 226
L+ + D+ A +F E+P L S++ +++ G+ + A+ L++ MV
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
+G + T +++ + G + L ++ + G+ IL LVN +K G
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 287 MARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTF 339
A K+ + M ++ NV+ ++ +I G G++ +A L + M ++G+ V +D F
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI-VHDDTVF 838
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 157/389 (40%), Gaps = 57/389 (14%)
Query: 100 TFMWNTLIRAQRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CSSLTPALPVHKQVHAH 158
T + +L ++R + AL+L M G P HT+ L+ + CS +++
Sbjct: 327 TVLIKSLCGSERKSE-ALNLVKEMEETGIKPNIHTYTVLIDSLCSQC--KFEKARELLGQ 383
Query: 159 VLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSN-- 216
+L+ GL + N L+ Y G + DA V + + SR LS T + +C +
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 217 -EALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM--------------- 260
+A+ + M+ P+ T S++ RSG + R+ M
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 261 --------RV------------KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPERNV 300
RV KGV V++ +AL++ Y K G + A + + M +N
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 301 ----VTWNGMICGLATHGHVEDALSLFENMEKEGV--AVPNDVTFIGVLSACCHGGLLDV 354
+T+N +I GL G +++A L E M K G+ V D I L G D
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL---LKDGDFDH 620
Query: 355 GRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALL 411
F M + G +P Y + R G+LL+A++++ M PD+ +L+
Sbjct: 621 AYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 412 EASKNIGNTEVAKVVTEEI--LALEPDNH 438
+ ++G T A V + + EP H
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
Query: 197 RSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERI 256
R+ ++ +CG + +EAL L + M G +PN T ++ + E +
Sbjct: 324 RTYTVLIKSLCGSER---KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 257 HEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLAT 312
M KG+ VI +AL+N Y K G I A + + M R N T+N +I G
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC- 439
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
+V A+ + M + V +P+ VT+ ++ C G D + S+ G+ P
Sbjct: 440 KSNVHKAMGVLNKMLERKV-LPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQ 497
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEE 429
Y M+D L + ++ EA +L + K P+VV+ AL++ G + A ++ E+
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 430 ILA 432
+L+
Sbjct: 558 MLS 560
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 158 HVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIP----SRSLSLWTTMVCGYAQNF 213
+L G D+H ++ Y G L+DA + ++ S L +++++ GY
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 214 CSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGS 273
+N A + + M G EP+ T S++ LE+ ++ + KG E +
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKH-----LLEM-----KYGKQKGSEPEL---C 733
Query: 274 ALVNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
A+ NM + + + K+ + N ++ +I G+ G++ A +F++M++
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 334 PNDVTFIGVLSACC----HGGLLDVGRDVFC 360
P+++ F +LS CC H V D+ C
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMIC 824
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 146/343 (42%), Gaps = 21/343 (6%)
Query: 97 QPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHK 153
PN F++N LI + R A L+ M + G P T+ L+ L
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR-RGKLDTAL 422
Query: 154 QVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMVCGY 209
++ GL L + N L+ + GD+ A E+ ++ L +T+++ GY
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
N+AL L+ M +G P+ T ++LS R+G + ++ M V+
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 270 ILGSALVNMYAKNGAIAMARKLFDGMPERNVV----TWNGMICGLATHGHVEDALSLFEN 325
+ + ++ Y + G ++ A + M E+ +V ++ +I GL G +A +
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 326 MEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD--LLG 383
+ K G N++ + G+L C G L+ V C G++ + YG ++D L
Sbjct: 603 LHK-GNCELNEICYTGLLHGFCREGKLEEALSV-CQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 384 RGGKLLEAKELIKGM---PWKPDVVILGALLEASKNIGNTEVA 423
+ KL L+K M KPD VI ++++A G+ + A
Sbjct: 661 KDRKLFFG--LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 9/268 (3%)
Query: 168 SHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVA 227
S + GL + + L + V D S +L ++ ++ + +EA LF+ M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 228 EGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAM 287
G PN T + ++ R G L+ M G+++ V ++L+N + K G I+
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 288 AR----KLFDGMPERNVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVL 343
A ++ + E VVT+ ++ G + G + AL L+ M +G+A P+ TF +L
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA-PSIYTFTTLL 514
Query: 344 SACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK-- 401
S GL+ +F M + ++P Y M++ G + +A E +K M K
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 402 -PDVVILGALLEASKNIGNTEVAKVVTE 428
PD L+ G AKV +
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 201 LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFM 260
++T+M+ ++ EA +++ M+ EG PN T +V++ ++G + E + M
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 261 R-VKGVEVGVILGSAL-------VNMYAKNGAIAMARKLFDGMPERNVVTWNGMICGLAT 312
+ V V V G L V+M A+ + + G+ N T+N +I G
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDM---QKAVELHNAILKGLLA-NTATYNMLIRGFCR 799
Query: 313 HGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKI 372
G +E+A L M +GV+ P+ +T+ +++ C + +++ SM T GI P
Sbjct: 800 QGRIEEASELITRMIGDGVS-PDCITYTTMINELCRRNDVKKAIELWNSM-TEKGIRPDR 857
Query: 373 EHYGCMVDLLGRGGKLLEAKELIKGM 398
Y ++ G++ +A EL M
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEM 883
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 151 VHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTMV 206
+ K++ G G + + L+ Y SG +A VF+ + L + ++
Sbjct: 251 IAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310
Query: 207 --CGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
CG + F+ M G +P+ T S+L+ C+R G E + + M +
Sbjct: 311 DACGKG-GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDAL 320
+E V + L++ K G + +A ++ MP + NVV+++ +I G A G ++AL
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 321 SLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVD 380
+LF M G+A+ + V++ +LS G + D+ M +V GI+ + Y ++
Sbjct: 430 NLFGEMRYLGIAL-DRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNALLG 487
Query: 381 LLGRGGKLLEAKELIKGMPWK---PDVVILGALLE 412
G+ GK E K++ M + P+++ L++
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 144/343 (41%), Gaps = 21/343 (6%)
Query: 91 IFSSIHQ----PNTFMWNTLIRA-----QRHPQTALSLYITMRRHGALPGKHTFPFLLKA 141
+F+S+ + PN +N +I A Q A + M+R+G P + TF LL
Sbjct: 290 VFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA-KFFDEMQRNGVQPDRITFNSLLAV 348
Query: 142 CSSLTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSR---- 197
CS + + + + D N L+ G + A + ++P +
Sbjct: 349 CSR-GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP 407
Query: 198 SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIH 257
++ ++T++ G+A+ +EAL LF M G + + ++LS + G E I
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 258 EFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATH 313
M G++ V+ +AL+ Y K G +K+F M N++T++ +I G +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 314 GHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIE 373
G ++A+ +F + G+ + V + ++ A C GL+ + M T GI P +
Sbjct: 528 GLYKEAMEIFREFKSAGLRA-DVVLYSALIDALCKNGLVGSAVSLIDEM-TKEGISPNVV 585
Query: 374 HYGCMVDLLGRGGKLLEAKELIKGMPWKPDVVILGALLEASKN 416
Y ++D GR + + + G L AL E N
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN 628
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 120/289 (41%), Gaps = 25/289 (8%)
Query: 162 FGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPS----RSLSLWTTMVCGYAQNFCSNE 217
G+ LD N L+ Y+ G +A + E+ S + + + ++ GY + +E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVN 277
+F M E PN T ++++ ++ G + I + G+ V+L SAL++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 278 MYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAV 333
KNG + A L D M + NVVT+N +I ++ + G ++
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY-----SNGGSL 612
Query: 334 PNDVTFIGVLSACCHGGLLDVGRDVF--CSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
P + + L+ ++ + + + +T E ++ C++++ +
Sbjct: 613 PFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK------- 665
Query: 392 KELIKGMPWKPDVVILGALLEASKNIGNTEVAKVVTEEILALEPDNHGV 440
+ + KP+VV A+L A + E A ++ EE+ + +GV
Sbjct: 666 ---MHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGV 711
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 25/347 (7%)
Query: 101 FMWNTLIRAQRHP-QTALSLYITMRRHGALPGKHTFPFLLKACSSLTPALPVHKQVHAHV 159
F+W + + +H Q++ + + + +H H L L+ L + V
Sbjct: 67 FIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVG--- 123
Query: 160 LKFGLGLD----SHVANGLVRCYSVSGDLVDARFVFDEIPS----RSLSLWTTMVCGYAQ 211
G+ D SHV + L+ Y+ +G + D+ VF++I S L T ++ +
Sbjct: 124 ---GVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK 180
Query: 212 NFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVIL 271
++ +F+ MV G N ++ AC++SG E E++ M KGV +
Sbjct: 181 QRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFT 240
Query: 272 GSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENME 327
+ L+++Y K A + D M N+VT+N I G + G + +A LF ++
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK 300
Query: 328 KEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGK 387
+ A N VT+ ++ C +D + M++ G P + Y ++ L G+
Sbjct: 301 DDVTA--NHVTYTTLIDGYCRMNDIDEALRLREVMES-RGFSPGVVTYNSILRKLCEDGR 357
Query: 388 LLEAKELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEIL 431
+ EA L+ M K PD + L+ A I + A V ++++
Sbjct: 358 IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 13/287 (4%)
Query: 193 EIPSRSLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLEL 252
E P +++ ++ YA+ N+++ +FE + + G +P+ +L++ + +
Sbjct: 127 EDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDT 186
Query: 253 GERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMIC 308
+I + M GV + + + LV+ +K+G A KL M E+ ++ T+N +I
Sbjct: 187 VWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 309 GLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGI 368
+ALS+ + ME+ GVA PN VT+ + G + +F +K +
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVA-PNIVTYNSFIHGFSREGRMREATRLFREIKD--DV 303
Query: 369 EPKIEHYGCMVDLLGRGGKLLEA---KELIKGMPWKPDVVILGALLEASKNIGNTEVAKV 425
Y ++D R + EA +E+++ + P VV ++L G A
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 426 VTEEI--LALEPDNHGVHVSLSNMYAEAGEWQDVLRLRKTMKEERLK 470
+ E+ +EPDN + +L N Y + + ++++K M E LK
Sbjct: 364 LLTEMSGKKIEPDNITCN-TLINAYCKIEDMVSAVKVKKKMIESGLK 409
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 18/244 (7%)
Query: 99 NTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKACSSLT---PALPVH 152
N ++N L+ A P+ A L M G P T+ L+ + AL V
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 153 KQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS---LWTTMVCGY 209
++ + G+ + N + +S G + +A +F EI + +TT++ GY
Sbjct: 262 DRME----RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGY 317
Query: 210 AQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGV 269
+ +EAL L E M + GF P T S+L G + R+ M K +E
Sbjct: 318 CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 270 ILGSALVNMYAK----NGAIAMARKLFDGMPERNVVTWNGMICGLATHGHVEDAL-SLFE 324
I + L+N Y K A+ + +K+ + + ++ ++ +I G +E+A LF
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 325 NMEK 328
+EK
Sbjct: 438 MIEK 441
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 152/378 (40%), Gaps = 58/378 (15%)
Query: 96 HQPNTFMWNTLIRAQRHPQ---TALSLYITMRRHGALPGKHTFPFLLKAC---SSLTPAL 149
++P+ ++L+ H + A++L M G P TF L+ + + A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLS----LWTTM 205
+ Q+ + L V NGL + GD+ A + ++ + ++ T+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCK----RGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 206 VCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGV 265
+ G + ++AL LF M +G P+ T +S++S G R+ M + +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 266 EVGVILGSALVNMYAKNGAIAMARKLFDGMPER--------------------------- 298
V+ SAL++ + K G + A KL+D M +R
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 299 ------------NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSAC 346
NVVT++ +I G VE+ + LF M + G+ V N VT+ ++
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYTTLIHGF 443
Query: 347 CHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAK---ELIKGMPWKPD 403
D + VF M +V G+ P I Y ++D L + GKL +A E ++ +PD
Sbjct: 444 FQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 404 VVILGALLEASKNIGNTE 421
+ ++E G E
Sbjct: 503 IYTYNIMIEGMCKAGKVE 520
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 178/425 (41%), Gaps = 63/425 (14%)
Query: 96 HQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CS--SLTPAL 149
++P+TF + TLI A++L M + G P T+ ++ C + AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 150 PVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSL-------SLW 202
+ K++ ++ + + + + +GL + + DA +F E+ ++ + S
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD----DALNLFTEMDNKGIRPDVFTYSSL 299
Query: 203 TTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRV 262
+ +C Y + ++A L M+ PN T ++++ A + G L E++++ M
Sbjct: 300 ISCLCNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 263 KGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMICGLATHGHVED 318
+ ++ + S+L+N + + + A+ +F+ M + NVVT++ +I G VE+
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 319 ALSLFENMEKEG-------------------------------VAV---PNDVTFIGVLS 344
+ LF M + G V+V PN +T+ +L
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 345 ACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK--- 401
C G L VF ++ +EP I Y M++ + + GK+ + EL + K
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 402 PDVVILGALLEASKNIGNTEVAKVVTEEILALEP-DNHGVHVSLSNMYAEAGEWQDVLRL 460
P+V+ ++ G+ E A + +++ P N G + +L G+ + L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 461 RKTMK 465
K M+
Sbjct: 596 IKEMR 600
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 44/236 (18%)
Query: 218 ALALFEGMVAEGFEPNGATLASVLSACARSG-----------CLELGERIHEF------- 259
ALA+ M+ G+EP+ TL+S+L+ S +E+G + F
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 260 -----------------MRVKGVEVGVILGSALVNMYAKNGAIAMA----RKLFDGMPER 298
M +G + ++ +VN K G I +A +K+ G E
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 299 NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDV 358
+VV +N +I GL + H++DAL+LF M+ +G+ P+ T+ ++S C+ G +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR-PDVFTYSSLISCLCNYGRWSDASRL 315
Query: 359 FCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPWK---PDVVILGALL 411
M I P + + ++D + GKL+EA++L M + PD+ +L+
Sbjct: 316 LSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 131/303 (43%), Gaps = 29/303 (9%)
Query: 83 GDLTHASRIFSSIHQ----PNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTF 135
G + ASR+ S + + PN ++ LI A + A LY M + P T+
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 136 PFLLKACSSLTPALPVHKQVH--AHVLKFGLGLDSH----VANGLVRCYSVSGDLVDARF 189
SSL +H ++ H+ + + D + L++ + + + +
Sbjct: 367 -------SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 190 VFDEIPSRSLS----LWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACA 245
+F E+ R L +TT++ G+ Q + A +F+ MV+ G PN T +L
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 246 RSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVV 301
++G L + E+++ +E + + ++ K G + +LF + + NV+
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 302 TWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCS 361
+N MI G G E+A SL + M+++G +PN T+ ++ A G + ++
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDG-PLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 362 MKT 364
M++
Sbjct: 599 MRS 601
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 153/334 (45%), Gaps = 32/334 (9%)
Query: 142 CSSLTPALPVHKQV-----HAHVLKFGLGLDSHVANGLVRCYSVSGDLV-DARFVFDEIP 195
CS L+ AL ++ ++ FG + NG R GD V DA ++FD++
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFG-----SLLNGFCR-----GDRVYDALYMFDQMV 178
Query: 196 SR----SLSLWTTMVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLE 251
++ ++ T++ G ++ + AL L M +G P+ T S++S SG
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 252 LGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIAMARKLFDGMPER----NVVTWNGMI 307
R+ M + + V +AL++ K G ++ A + ++ M R ++VT++ +I
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 308 CGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYG 367
GL + +++A +F M +G P+ VT+ +++ C ++ G +FC M + G
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKG-CFPDVVTYSILINGYCKSKKVEHGMKLFCEM-SQRG 356
Query: 368 IEPKIEHYGCMVDLLGRGGKLLEAKELIKGMPW---KPDVVILGALLEASKNIGNTEVAK 424
+ Y ++ R GKL A+E+ + M + P+++ LL + G E A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 425 VVTEEIL--ALEPDNHGVHVSLSNMYAEAGEWQD 456
V+ ++ ++ D ++ + M +AGE D
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGM-CKAGEVAD 449
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 129/353 (36%), Gaps = 92/353 (26%)
Query: 96 HQPNTFMWNTLIRA---QRHPQTALSLYITMRRHGALPGKHTFPFLLKA-CSS------- 144
++PN ++NT+I + AL L M + G P T+ L+ CSS
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 145 LTPALPVHKQVHAHVLKFGLGLDSHVANGLVRCYSVSGDLVDARFVFDEIPSRSLSLWTT 204
+ ++++ V F +D+ V G V
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRV----------------------------- 272
Query: 205 MVCGYAQNFCSNEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKG 264
+EA +E M+ +P+ T + ++ L+ E + FM KG
Sbjct: 273 -----------SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 265 VEVGVILGSALVNMYAKNGAIAMARKLFDGMPER-------------------------- 298
V+ S L+N Y K+ + KLF M +R
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 299 -------------NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGVLSA 345
N++T+N ++ GL +G +E AL + +M+K G+ + VT+ ++
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD-ADIVTYNIIIRG 440
Query: 346 CCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEAKELIKGM 398
C G + D++CS+ G+ P I Y M+ L + G EA L + M
Sbjct: 441 MCKAGEVADAWDIYCSL-NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 11/230 (4%)
Query: 216 NEALALFEGMVAEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSAL 275
+++L LF MV P+ A + +LSA ++ ++ + E M++ G+ + + L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 276 VNMYAKNGAIAMARKLFDGMP----ERNVVTWNGMICGLATHGHVEDALSLFENMEKEGV 331
+N + + +++A M E ++VT+ ++ G V DAL +F+ M G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 332 AVPNDVTFIGVLSACCHGGLLDVGRDVFCSMKTVYGIEPKIEHYGCMVDLLGRGGKLLEA 391
PN V + ++ C +D D+ M+ GI P + Y ++ L G+ +A
Sbjct: 183 K-PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 392 KELIKGMPWK---PDVVILGALLEASKNIGNTEVAKVVTEEIL--ALEPD 436
++ M + PDV AL++A G A+ EE++ +L+PD
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 172 NGLVRCYSVSGDLVDARFVFDEIPSR-----SLSLWTTMVCGYAQNFCSNEALALFEGMV 226
N L+ Y S L +A F E+P + L + TM+ + ++ L++FE +
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 227 AEGFEPNGATLASVLSACARSGCLELGERIHEFMRVKGVEVGVILGSALVNMYAKNGAIA 286
GFEP+ + ++L R G+RI + M+ K + + ++ V +N
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFT 280
Query: 287 MARKLFDGMPER----NVVTWNGMICGLATHGHVEDALSLFENMEKEGVAVPNDVTFIGV 342
A L D M +V T+N +I ++E+ + + M+++G+ P+ VT+ +
Sbjct: 281 DALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL-TPDTVTYCML 339
Query: 343 LSACCHGGLLDVGRDVFCSMKTV-YGIEPKIEHYGCMVDLLGRGGKLLEAKELIKG 397
+ C G LD R V S + + + + + Y +V+ L GK+ EA +L+K
Sbjct: 340 IPLLCKKGDLD--RAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393