Miyakogusa Predicted Gene

Lj0g3v0055679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0055679.1 Non Chatacterized Hit- tr|D7SVR4|D7SVR4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,64.06,1e-16,MTS,Methyltransferase small domain; no
description,NULL; seg,NULL; PUTATIVE UNCHARACTERIZED PROTEIN
,gene.g3900.t1.1
         (387 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27180.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   167   8e-42

>AT3G27180.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:10027163-10030062 REVERSE LENGTH=518
          Length = 518

 Score =  167 bits (424), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 100/123 (81%), Gaps = 2/123 (1%)

Query: 250 NALANAFDALLRKLQKYVPHESSVADLYAGAGVIGLSLAATRK--SIKCIEINKESKASF 307
            A   AFD+LL KL KYVP  SSVADLYAGAGVIGLSLA +RK  S+KCIE+NKE++ SF
Sbjct: 275 QANTRAFDSLLWKLHKYVPGGSSVADLYAGAGVIGLSLATSRKCSSVKCIEVNKEARLSF 334

Query: 308 EKTIARLPSTVNSSISWHHADASKEPLLWLVGSDVVVIDPPRKGLDVSLIDALKDISSIE 367
           EKTI RLP+++N SISWHHADAS  PL W++GSDVVV+DPPR+GLD SL   L+ + SIE
Sbjct: 335 EKTIQRLPNSLNCSISWHHADASVNPLSWIIGSDVVVVDPPRRGLDASLRQMLESVPSIE 394

Query: 368 RKV 370
           +++
Sbjct: 395 KRM 397



 Score =  167 bits (422), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 93/120 (77%), Gaps = 8/120 (6%)

Query: 142 IWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECK--------AFSQYHLGITELDI 193
           +WGWRCRAKLAVRGSS N LIGLY+EGTH V+DIPECK        A      GI   D+
Sbjct: 93  LWGWRCRAKLAVRGSSDNALIGLYQEGTHTVVDIPECKSHHPNINAAIELLREGIKVFDV 152

Query: 194 EPYLEDEGTGDLRYVQMAVTTYNTSLPAPERYKNGKVQVTLVWNSRSEQSPGVDKMNALA 253
            P+ ED+GTGDLRYVQMAVTT++T+L APERYKNGKVQV+LVWNSR+E+S   DK+ AL+
Sbjct: 153 VPFDEDQGTGDLRYVQMAVTTHSTNLRAPERYKNGKVQVSLVWNSRNERSHNADKLQALS 212