Miyakogusa Predicted Gene

Lj0g3v0055279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0055279.1 Non Chatacterized Hit- tr|I3SI93|I3SI93_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,90.16,0,coiled-coil,NULL; zeta_caro_desat:
9,9'-di-cis-zeta-carotene desatur,Zeta-carotene desaturase;
FAD/N,NODE_30126_length_2333_cov_127.511360.path1.1
         (577 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04870.2 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desatur...   958   0.0  
AT3G04870.1 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desatur...   958   0.0  
AT4G14210.1 | Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3...   240   2e-63
AT4G14210.2 | Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3...   238   7e-63

>AT3G04870.2 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desaturase
           | chr3:1342842-1346189 FORWARD LENGTH=558
          Length = 558

 Score =  958 bits (2477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/546 (83%), Positives = 494/546 (90%), Gaps = 5/546 (0%)

Query: 32  IKTHKCRVRCSLDSNVSDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLD 91
           +K+ +  V  SLDS+VSDMSVNAPKGLFPPEP  Y+GPKLKVAIIGAGLAGMSTAVELLD
Sbjct: 18  LKSRRFYVNSSLDSDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLD 77

Query: 92  QGHEVDIYESRPFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAENNLLVKD 151
           QGHEVDIY+SR FIGGKVGSFVD+RGNHIEMGLHVFFGCYNNLFRLMKKVGAE NLLVKD
Sbjct: 78  QGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKD 137

Query: 152 HTHTFVNTGGQIGELDFRFPIGAPLHGITAFLTTNQLKTYDKARNALALALSPVVRALVD 211
           HTHTF+N  G IGELDFRFP+GAP+HGI AFL TNQLK YDK RN+LALALSPVV+ALVD
Sbjct: 138 HTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVD 197

Query: 212 PDGALRDIRNLDSVSFSDWFLSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFAL 271
           PDGA+RDIRNLDS+SFSDWFLSKGGTR SIQ+MWDPVAYALGFIDCDN+SARCMLTIF+L
Sbjct: 198 PDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSL 257

Query: 272 FATKTEASLLRMLKGSPDVYLSGPIRKYITDRGGRFHLRWGCREILYDESADGSTYVKGL 331
           FATKTEASLLRMLKGSPDVYLSGPI++YITDRGGR HLRWGCREILYD+SADG TYV GL
Sbjct: 258 FATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGL 317

Query: 332 SMSKATAKQIVKADAYVAACDVPGIKRLIPSEWRENEFFNNIYELVGVPVVTVQLRYNGW 391
           ++SKAT K+IVKAD YVAACDVPGIKRL+P EWRE+ FFN+IYEL GVPVVTVQLRYNGW
Sbjct: 318 AISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGW 377

Query: 392 VTELQNLEKSRQLKKATGLDNLLYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPG 451
           VTELQ++E +RQLK+A GLDNLLYTPDADFSCFADLAL SP DYYIEGQG+LLQCVLTPG
Sbjct: 378 VTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPG 437

Query: 452 DPYMPLPNEEIIARVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTP 511
           DPYM +PN++II +VA QV  LFPSS+GLEVTWSSVVKI QSLYRE PGKDPFRPDQKTP
Sbjct: 438 DPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTP 497

Query: 512 VKNFFLAGSYTKQDYIDSMEGATLSGRQASACICDAGEELLTLRKKLDEFEDDLQISNTK 571
           +KNFFLAGSYTKQDYIDSMEGATLSGRQAS+ ICDAGEEL  L KKL         +   
Sbjct: 498 IKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS-----SATAVP 552

Query: 572 DELSLV 577
           DELSLV
Sbjct: 553 DELSLV 558


>AT3G04870.1 | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desaturase
           | chr3:1342842-1346189 FORWARD LENGTH=558
          Length = 558

 Score =  958 bits (2477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/546 (83%), Positives = 494/546 (90%), Gaps = 5/546 (0%)

Query: 32  IKTHKCRVRCSLDSNVSDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLD 91
           +K+ +  V  SLDS+VSDMSVNAPKGLFPPEP  Y+GPKLKVAIIGAGLAGMSTAVELLD
Sbjct: 18  LKSRRFYVNSSLDSDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLD 77

Query: 92  QGHEVDIYESRPFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAENNLLVKD 151
           QGHEVDIY+SR FIGGKVGSFVD+RGNHIEMGLHVFFGCYNNLFRLMKKVGAE NLLVKD
Sbjct: 78  QGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKD 137

Query: 152 HTHTFVNTGGQIGELDFRFPIGAPLHGITAFLTTNQLKTYDKARNALALALSPVVRALVD 211
           HTHTF+N  G IGELDFRFP+GAP+HGI AFL TNQLK YDK RN+LALALSPVV+ALVD
Sbjct: 138 HTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVD 197

Query: 212 PDGALRDIRNLDSVSFSDWFLSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFAL 271
           PDGA+RDIRNLDS+SFSDWFLSKGGTR SIQ+MWDPVAYALGFIDCDN+SARCMLTIF+L
Sbjct: 198 PDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSL 257

Query: 272 FATKTEASLLRMLKGSPDVYLSGPIRKYITDRGGRFHLRWGCREILYDESADGSTYVKGL 331
           FATKTEASLLRMLKGSPDVYLSGPI++YITDRGGR HLRWGCREILYD+SADG TYV GL
Sbjct: 258 FATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGL 317

Query: 332 SMSKATAKQIVKADAYVAACDVPGIKRLIPSEWRENEFFNNIYELVGVPVVTVQLRYNGW 391
           ++SKAT K+IVKAD YVAACDVPGIKRL+P EWRE+ FFN+IYEL GVPVVTVQLRYNGW
Sbjct: 318 AISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGW 377

Query: 392 VTELQNLEKSRQLKKATGLDNLLYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPG 451
           VTELQ++E +RQLK+A GLDNLLYTPDADFSCFADLAL SP DYYIEGQG+LLQCVLTPG
Sbjct: 378 VTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPG 437

Query: 452 DPYMPLPNEEIIARVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTP 511
           DPYM +PN++II +VA QV  LFPSS+GLEVTWSSVVKI QSLYRE PGKDPFRPDQKTP
Sbjct: 438 DPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTP 497

Query: 512 VKNFFLAGSYTKQDYIDSMEGATLSGRQASACICDAGEELLTLRKKLDEFEDDLQISNTK 571
           +KNFFLAGSYTKQDYIDSMEGATLSGRQAS+ ICDAGEEL  L KKL         +   
Sbjct: 498 IKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS-----SATAVP 552

Query: 572 DELSLV 577
           DELSLV
Sbjct: 553 DELSLV 558


>AT4G14210.1 | Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3 |
           chr4:8190426-8194769 REVERSE LENGTH=566
          Length = 566

 Score =  240 bits (613), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/488 (32%), Positives = 255/488 (52%), Gaps = 37/488 (7%)

Query: 71  LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDKRGNHIEMGLHVFFGC 130
           LKV I GAGLAG+STA  L D GH+  + E+R  +GGK+ ++ D+ G+  E GLH+FFG 
Sbjct: 93  LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGA 152

Query: 131 YNNLFRLMKKVGAENNLLVKDHTHTFV--NTGGQIGELDFRFPIGAPLHGITAFLTTNQL 188
           Y N+  L  ++G  + L  K+H+  F   +  G+    DF   + APL+GI A L  N++
Sbjct: 153 YPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEM 212

Query: 189 KTYDKARNALALALSPVVRALVDPDGALRDIRNLDSVSFSDWFLSKGGTRTSIQKMWDPV 248
            T+ + +   A+ L P   A+V   G    +   D +S  +W   +G       +++  +
Sbjct: 213 LTWPE-KIKFAIGLLP---AMV---GGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAM 265

Query: 249 AYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDRGGRFH 308
           + AL FI+ D +S +C+L     F  +   S +  L G+P   L  P+  +I   GG   
Sbjct: 266 SKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQ 325

Query: 309 LRWGCREILYDESADGSTYVKGLSMSKATAKQIVKADAYVAACDVPGIKRLIPSEWRENE 368
           L    ++I  ++  DG+  VK   ++  +    V+ DAYV A  V  +K L+P  W+E  
Sbjct: 326 LNSRIKKIELND--DGT--VKSFLLTNGST---VEGDAYVFAAPVDILKLLLPDPWKEIP 378

Query: 369 FFNNIYELVGVPVVTVQLRYNGWVTELQNLEKSRQLKKATGLDNLLYTPDADFSCFADLA 428
           +F  + +LVGVPV+ V + ++            R+LK     D+LL++     S +AD++
Sbjct: 379 YFKKLDKLVGVPVINVHIWFD------------RKLKNT--YDHLLFSRSNLLSVYADMS 424

Query: 429 LTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFP-----SSQGLEVT 483
           LT  E  Y +   S+L+ V  P + ++   + +II    K++  LFP          ++ 
Sbjct: 425 LTCKE--YYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELEKLFPDEISADQSKAKIL 482

Query: 484 WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAC 543
              VVK  +S+Y+  P  +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+  S  
Sbjct: 483 KYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCSQS 542

Query: 544 ICDAGEEL 551
           I    E L
Sbjct: 543 IVQDYELL 550


>AT4G14210.2 | Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3 |
           chr4:8190426-8194769 REVERSE LENGTH=566
          Length = 566

 Score =  238 bits (608), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 159/488 (32%), Positives = 254/488 (52%), Gaps = 37/488 (7%)

Query: 71  LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDKRGNHIEMGLHVFFGC 130
           LKV I GAGLAG+STA  L D GH+  + E+R  +GGK+ ++ D+ G+  E GLH+FFG 
Sbjct: 93  LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGA 152

Query: 131 YNNLFRLMKKVGAENNLLVKDHTHTFV--NTGGQIGELDFRFPIGAPLHGITAFLTTNQL 188
           Y N+  L  ++G  + L  K+H+  F   +  G+    DF   + APL+GI A L  N++
Sbjct: 153 YPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEM 212

Query: 189 KTYDKARNALALALSPVVRALVDPDGALRDIRNLDSVSFSDWFLSKGGTRTSIQKMWDPV 248
            T+ + +   A+ L P   A+V   G    +   D +S  +W   +        +++  +
Sbjct: 213 LTWPE-KIKFAIGLLP---AMV---GGQAYVEAQDGLSVKEWMEKQAIPERVTDEVFIAM 265

Query: 249 AYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDRGGRFH 308
           + AL FI+ D +S +C+L     F  +   S +  L G+P   L  P+  +I   GG   
Sbjct: 266 SKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQ 325

Query: 309 LRWGCREILYDESADGSTYVKGLSMSKATAKQIVKADAYVAACDVPGIKRLIPSEWRENE 368
           L    ++I  ++  DG+  VK   ++  +    V+ DAYV A  V  +K L+P  W+E  
Sbjct: 326 LNSRIKKIELND--DGT--VKSFLLTNGST---VEGDAYVFAAPVDILKLLLPDPWKEIP 378

Query: 369 FFNNIYELVGVPVVTVQLRYNGWVTELQNLEKSRQLKKATGLDNLLYTPDADFSCFADLA 428
           +F  + +LVGVPV+ V + ++            R+LK     D+LL++     S +AD++
Sbjct: 379 YFKKLDKLVGVPVINVHIWFD------------RKLKNT--YDHLLFSRSNLLSVYADMS 424

Query: 429 LTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIARVAKQVISLFP-----SSQGLEVT 483
           LT  E  Y +   S+L+ V  P + ++   + +II    K++  LFP          ++ 
Sbjct: 425 LTCKE--YYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELEKLFPDEISADQSKAKIL 482

Query: 484 WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAC 543
              VVK  +S+Y+  P  +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+  S  
Sbjct: 483 KYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCSQS 542

Query: 544 ICDAGEEL 551
           I    E L
Sbjct: 543 IVQDYELL 550