Miyakogusa Predicted Gene

Lj0g3v0054689.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054689.1 Non Chatacterized Hit- tr|C5YQ59|C5YQ59_SORBI
Putative uncharacterized protein Sb08g000840
OS=Sorghu,63.64,1e-18,FAMILY NOT NAMED,NULL; TNASE_3,Staphylococcal
nuclease (SNase-like); Staphylococcal nuclease
homolog,NODE_34181_length_1569_cov_65.991074.path1.1
         (335 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40410.2 | Symbols:  | Staphylococcal nuclease homologue | ch...   489   e-139
AT3G56170.1 | Symbols: CAN | Ca-2+ dependent nuclease | chr3:208...   450   e-127
AT2G40410.1 | Symbols:  | Staphylococcal nuclease homologue | ch...   311   3e-85

>AT2G40410.2 | Symbols:  | Staphylococcal nuclease homologue |
           chr2:16873509-16875215 FORWARD LENGTH=332
          Length = 332

 Score =  489 bits (1260), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 229/332 (68%), Positives = 270/332 (81%), Gaps = 2/332 (0%)

Query: 1   MGNALRFLYSNCCKPTAAGDSDSLGPHGVSSATVGVSALAHDLFHFENTSQVPEGLSKHV 60
           MGNAL FLY  CCKPT     DSLGPHGVS+ATVGVSALAHDLF+FE TSQVPEGL ++V
Sbjct: 1   MGNALTFLYGKCCKPTTT--DDSLGPHGVSAATVGVSALAHDLFNFEITSQVPEGLGRYV 58

Query: 61  KSSKKAQANWYRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPH 120
           +SS+KAQANWYRK+++AWK+AKPPP+T EEA+RLV   LKR+QKADVEGLL+FYGLPL H
Sbjct: 59  QSSRKAQANWYRKILEAWKQAKPPPQTAEEASRLVTDILKRNQKADVEGLLSFYGLPLSH 118

Query: 121 TLVEVVAQPPTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXXX 180
           TLVEV  + P SLP G+ +E  TLPVD KAVADGDT+TVYVST++P  SS+VP  ++   
Sbjct: 119 TLVEVTVEAPVSLPEGILFEFQTLPVDPKAVADGDTITVYVSTSEPVVSSSVPREVNLAA 178

Query: 181 XXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYGK 240
                          D LH++IID+GYR+L+ +NEEVLA+K+RIRLRGIDAPES MP+GK
Sbjct: 179 VQRAKAREKRNYPKADELHQKIIDSGYRVLNIENEEVLARKFRIRLRGIDAPESQMPFGK 238

Query: 241 EAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNGIFVQELMLKKGLAWHYSAYDKRPE 300
           EA+  L K++  KSL+VL+YGED+YGRCVGD+YCNGIFVQE MLKKGLAWHY AYDKRP 
Sbjct: 239 EAQEGLLKIVGRKSLKVLVYGEDQYGRCVGDLYCNGIFVQEAMLKKGLAWHYLAYDKRPV 298

Query: 301 LETWEKEARAKRVGLWASKNPEKPWDWRKDRR 332
           L  WEKEAR KR+GLWAS NPEKPWDWRK+ R
Sbjct: 299 LAKWEKEARQKRIGLWASSNPEKPWDWRKNNR 330


>AT3G56170.1 | Symbols: CAN | Ca-2+ dependent nuclease |
           chr3:20842614-20844319 FORWARD LENGTH=323
          Length = 323

 Score =  450 bits (1157), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/335 (64%), Positives = 256/335 (76%), Gaps = 12/335 (3%)

Query: 1   MGNALRFLYSNCCKPTAAGDSDSLGPHGVSSATVGVSALAHDLFHFENTSQVPEGLSKHV 60
           MGNA+R L   C           L  HGVS+++ GVSAL+ DL +FE TSQVPE L  +V
Sbjct: 1   MGNAIRLL-RKC-----------LNSHGVSASSGGVSALSRDLLNFETTSQVPEKLGSYV 48

Query: 61  KSSKKAQANWYRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPH 120
            SS+KAQANWYRK+++AWK+AKP P+TPEEA+RLVI  LK HQKADVEGLL+FYGLP PH
Sbjct: 49  VSSQKAQANWYRKILEAWKQAKPRPKTPEEASRLVIAALKNHQKADVEGLLSFYGLPSPH 108

Query: 121 TLVEVVAQPPTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXXX 180
            LVEV  + P SLP GV++E++TLPVD K+VADGDTVTVYVS+ DP  SS++P ++    
Sbjct: 109 NLVEVPTEAPVSLPKGVRFELNTLPVDTKSVADGDTVTVYVSSKDPLVSSSLPKDVSLAA 168

Query: 181 XXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYGK 240
                          DALHK II +GYRM+SFQNEEVLAKK+RIRL GID+PES MPYGK
Sbjct: 169 VKRAKAREKKNYTEADALHKTIIASGYRMISFQNEEVLAKKFRIRLSGIDSPESKMPYGK 228

Query: 241 EAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNGIFVQELMLKKGLAWHYSAYDKRPE 300
           EA  EL K+++GK L+VL+Y EDRYGRCVGDIYCNG FVQE+MLKKGLAWHY AYDKR E
Sbjct: 229 EAHDELLKMVEGKCLKVLVYTEDRYGRCVGDIYCNGKFVQEVMLKKGLAWHYVAYDKRAE 288

Query: 301 LETWEKEARAKRVGLWASKNPEKPWDWRKDRREAN 335
           L  WE EAR KRVGLWAS NPEKPW+WRK++R  N
Sbjct: 289 LAKWENEARQKRVGLWASSNPEKPWEWRKNKRGGN 323


>AT2G40410.1 | Symbols:  | Staphylococcal nuclease homologue |
           chr2:16873509-16874711 FORWARD LENGTH=226
          Length = 226

 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 148/227 (65%), Positives = 179/227 (78%), Gaps = 2/227 (0%)

Query: 1   MGNALRFLYSNCCKPTAAGDSDSLGPHGVSSATVGVSALAHDLFHFENTSQVPEGLSKHV 60
           MGNAL FLY  CCKPT     DSLGPHGVS+ATVGVSALAHDLF+FE TSQVPEGL ++V
Sbjct: 1   MGNALTFLYGKCCKPTTT--DDSLGPHGVSAATVGVSALAHDLFNFEITSQVPEGLGRYV 58

Query: 61  KSSKKAQANWYRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPH 120
           +SS+KAQANWYRK+++AWK+AKPPP+T EEA+RLV   LKR+QKADVEGLL+FYGLPL H
Sbjct: 59  QSSRKAQANWYRKILEAWKQAKPPPQTAEEASRLVTDILKRNQKADVEGLLSFYGLPLSH 118

Query: 121 TLVEVVAQPPTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXXX 180
           TLVEV  + P SLP G+ +E  TLPVD KAVADGDT+TVYVST++P  SS+VP  ++   
Sbjct: 119 TLVEVTVEAPVSLPEGILFEFQTLPVDPKAVADGDTITVYVSTSEPVVSSSVPREVNLAA 178

Query: 181 XXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLR 227
                          D LH++IID+GYR+L+ +NEEVLA+K+RIRLR
Sbjct: 179 VQRAKAREKRNYPKADELHQKIIDSGYRVLNIENEEVLARKFRIRLR 225