Miyakogusa Predicted Gene

Lj0g3v0054669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054669.1 tr|C7JA22|C7JA22_ORYSJ Os12g0109700 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os12g01097,60.56,1e-17,A_thal_Cys_rich: uncharacterized Cys-rich
domain,Uncharacterised protein family Cys-rich; seg,NULL;
,NODE_42470_length_2077_cov_176.458832.path1.1
         (556 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10980.1 | Symbols:  | PLAC8 family protein | chr3:3438810-34...   574   e-164
AT5G05350.1 | Symbols:  | PLAC8 family protein | chr5:1585757-15...   570   e-162
AT1G11380.1 | Symbols:  | PLAC8 family protein | chr1:3832695-38...    52   2e-06

>AT3G10980.1 | Symbols:  | PLAC8 family protein |
           chr3:3438810-3440501 FORWARD LENGTH=563
          Length = 563

 Score =  574 bits (1480), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 319/569 (56%), Positives = 396/569 (69%), Gaps = 32/569 (5%)

Query: 6   NGKDEIEECSNGS-----KVKELSLDVSMSRRTMLDSENSQRKYQGTASSIPD---RLXX 57
           N K EIEE SNGS     KV    LDVS SRRT++     +R    + S++PD   R   
Sbjct: 8   NLKAEIEE-SNGSSGKNTKVPPCPLDVSTSRRTLIGDGKPRR---WSISALPDASSRFQL 63

Query: 58  XXXXXXXXXXXRIASDRDQISQLVPSPSS---RSIRERFSGMFSKKLDWGSIKKMCREWI 114
                      ++A DRD++S+ V S S+    + RER SG+  +K+DW S+  M +EWI
Sbjct: 64  LKFGSPSAKFKKMAEDRDEVSRSVTSSSNGSSHNFRERISGVLHRKIDWSSLMNMGKEWI 123

Query: 115 RDPMNMALFAWILCVAVSGAILFLVMTGMLNAVLTKKSQRNAWFEVNNQILNALFTLMCL 174
           R+P+NMALF WIL VAVSGAILF+VMTGMLN  L KKSQR+AWFEVNNQILN LFTLMCL
Sbjct: 124 RNPINMALFVWILVVAVSGAILFMVMTGMLNHALPKKSQRDAWFEVNNQILNGLFTLMCL 183

Query: 175 YQHPKRIYHFVLLCRWGPKDIPRLRKVYCKNGTYKPHEWAHMMAVIILLNVNCFAQYALC 234
           YQHPKR YH VLLCRW   DI +LRK YCK+GTYKP+EW H+M V+ILL++NCFAQYALC
Sbjct: 184 YQHPKRFYHLVLLCRWKHDDITKLRKAYCKDGTYKPNEWMHIMVVVILLHLNCFAQYALC 243

Query: 235 GLNLGYKRSQRPAIGVGICVSFSIGAPAIAGLYSILSPLGKDY-DSEMDEEAQVHIPDAQ 293
           GLN+GY+RS+RP IGV IC+S +IGAPA+AGLY+ILSPLGKDY DS  DEE Q+   +  
Sbjct: 244 GLNVGYRRSERPPIGVAICISAAIGAPAVAGLYTILSPLGKDYNDSNEDEENQLKQREEG 303

Query: 294 KL-RVTPFEKKYSFSSRD----QRRIIENRPKWSGGILDLWNDISEAYLSLFCTFCVFGW 348
            + R    E++YSF+S         +  + P+WSGGILD+W+DIS AYLSLFCTFCVFGW
Sbjct: 304 SVNRRFTLERRYSFASASTGVGDGMVPVSDPQWSGGILDIWDDISLAYLSLFCTFCVFGW 363

Query: 349 NMERLGFGNMFVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGVGIILCFFGMLYGG 408
           NMER+GFGNM+VHIATF+LFC+APF+IF LAAVNI+++TVR+AL   GI+LC FG+LYGG
Sbjct: 364 NMERVGFGNMYVHIATFILFCLAPFFIFNLAAVNIDNETVREALGISGILLCVFGLLYGG 423

Query: 409 FWRIRMRNRFNLPSYDFCCGKPSASDCTLWLFCCWCALAQEVRTANSYDIVEDKFYKKGI 468
           FWRI+MR RF LPSY+FC G+ + +DC LWL CCWC+LAQEVRTANSY+IVEDKF ++  
Sbjct: 424 FWRIQMRKRFKLPSYNFCFGRAAIADCALWLCCCWCSLAQEVRTANSYEIVEDKFCQRKE 483

Query: 469 YAD--DQPQISPLPREDVAXXXXXXXXXXXPLGFNXXXXXXXXXXXXXXXFKGRYNPDRP 526
             +      +SPLPRED              LG +               +K  ++P+  
Sbjct: 484 EKNMVSPNLVSPLPREDGVFDPRFG------LGSSPKNISGASSPSPSRFWKEAHSPNVQ 537

Query: 527 LSSVTEEVPEKAKDGVMNPPTPPSIHRES 555
                EEV     D  + PP+P SIHRE+
Sbjct: 538 TPREKEEV---KSDVALTPPSPLSIHREA 563


>AT5G05350.1 | Symbols:  | PLAC8 family protein |
           chr5:1585757-1587337 FORWARD LENGTH=526
          Length = 526

 Score =  570 bits (1468), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 282/534 (52%), Positives = 363/534 (67%), Gaps = 33/534 (6%)

Query: 27  VSMSRRTMLDSENSQRKYQGTASSIPDRLXXXXXXXXXXXXXRIASDRDQISQLVPSPSS 86
           +S S + ++  E  +R  + +   + +R+             R+A +RD++S+      +
Sbjct: 20  LSTSHKILISEEKPRRWSESSLPDVSNRIKLLKFGSPSARLKRMAEERDEVSRS----VN 75

Query: 87  RSIRERFSGMFSKKLDWGSIKKMCREWIRDPMNMALFAWILCVAVSGAILFLVMTGMLNA 146
            S       + S+K++W  + KM ++W+++P+NM +F WI  VAVSGAILF+VMTGMLN 
Sbjct: 76  SSSSSSHDVVSSRKIEWACLMKMGKQWLQNPLNMVMFLWIFVVAVSGAILFMVMTGMLNH 135

Query: 147 VLTKKSQRNAWFEVNNQILNALFTLMCLYQHPKRIYHFVLLCRWGPKDIPRLRKVYCKNG 206
            L KKSQR+ WFEVNNQILNALFTLMCLYQHPKR YH VLLCRW   D+  LRK++CKNG
Sbjct: 136 ALPKKSQRDVWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWKQDDVTTLRKIFCKNG 195

Query: 207 TYKPHEWAHMMAVIILLNVNCFAQYALCGLNLGYKRSQRPAIGVGICVSFSIGAPAIAGL 266
           TYKP+EW HMM V++LL++NCFAQYALCGLNLGY+RS+RPAIGV IC+SF+I AP  AGL
Sbjct: 196 TYKPNEWIHMMVVVLLLHLNCFAQYALCGLNLGYRRSERPAIGVAICISFAIAAPTAAGL 255

Query: 267 YSILSPLGKDYDSEMDEEAQVHIPDAQKL--RVTPFEKKYSFSSRDQRRIIENRPKWSGG 324
           Y+ILSPLGKDYD + DEE QV       +  R    E++YSF+S D      + P+W  G
Sbjct: 256 YTILSPLGKDYDPQGDEENQVQAVGEGPVSNRKLSLERRYSFASNDV-----SNPEWREG 310

Query: 325 ILDLWNDISEAYLSLFCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIFILAAVNIE 384
           +LD+W DIS AYLSLFCTFC+FGWNMER+GFGNM+VHIATF+LFC+APF+IF LAA+NI+
Sbjct: 311 VLDIWEDISLAYLSLFCTFCLFGWNMERIGFGNMYVHIATFVLFCLAPFFIFNLAAINID 370

Query: 385 DDTVRQALVGVGIILCFFGMLYGGFWRIRMRNRFNLPSYDFCCGKPSASDCTLWLFCCWC 444
           ++ VR AL   GI+LC FG+LYGGFWRI+MR RF LP Y+ CCG+P+ +DCTLWLFCCWC
Sbjct: 371 NEMVRDALGYTGIVLCLFGLLYGGFWRIQMRKRFKLPGYNICCGRPAIADCTLWLFCCWC 430

Query: 445 ALAQEVRTANSYDIVEDKFYKK---GIYADDQPQISPLPREDVAXXXXXXXXXXXPLGFN 501
           +LAQEVRTANSY+IVEDKF K+       DD+  +S LPRED                F+
Sbjct: 431 SLAQEVRTANSYEIVEDKFCKRREENSKIDDEVVVSALPREDGV--------------FD 476

Query: 502 XXXXXXXXXXXXXXXFKGRYNPDRPLSSVTEEVPEKAKDGVMNPPTPPSIHRES 555
                               +P R      E    +  D  ++PP+PP IHRE+
Sbjct: 477 PSCLPKKMTTTMIA--SSTLSPSR---QKDETCLGEKGDEALSPPSPPFIHREA 525


>AT1G11380.1 | Symbols:  | PLAC8 family protein |
           chr1:3832695-3833921 FORWARD LENGTH=254
          Length = 254

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 10/147 (6%)

Query: 321 WSGGILDLWNDISEAYLSLFCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIFILAA 380
           W G ++D + D      S  C    FG NM R GFG+ F+  A  M+      +  +  A
Sbjct: 86  WEGDVMDCFEDRHLCIESACCPCYRFGKNMTRTGFGSCFLQGAVHMILIAGFLFNVVAFA 145

Query: 381 VNIEDDTVRQALVGVGIILCFFGMLYGGFWRIRMRNRFNLPSYDFCCGKPSASDCTLWLF 440
           V     T R   + + I        Y GF+R+ +R +FN+   D         D    L 
Sbjct: 146 V-----TKRHCFLYLAIAFVLLIGSYLGFFRMLIRRKFNIRGTD-----SFLDDFIHHLV 195

Query: 441 CCWCALAQEVRTANSYDIVEDKFYKKG 467
           C +C L QE +T    ++ +  ++ +G
Sbjct: 196 CPFCTLTQESKTLEMNNVHDGIWHGRG 222