Miyakogusa Predicted Gene

Lj0g3v0054399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054399.1 Non Chatacterized Hit- tr|F6I3H9|F6I3H9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.22,0,SUBFAMILY NOT NAMED,NULL; VACUOLAR PROTEIN SORTING
54,NULL; Vps54,Vps54-like; DUF2450,Vacuolar prote,CUFF.2466.1
         (991 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19490.2 | Symbols: ATVPS54, VPS54 | VPS54 | chr4:10616017-10...  1056   0.0  
AT4G19490.1 | Symbols: ATVPS54, VPS54 | VPS54 | chr4:10616017-10...  1056   0.0  

>AT4G19490.2 | Symbols: ATVPS54, VPS54 | VPS54 |
            chr4:10616017-10622934 FORWARD LENGTH=1034
          Length = 1034

 Score = 1056 bits (2732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/951 (57%), Positives = 664/951 (69%), Gaps = 11/951 (1%)

Query: 42   ISPPEFALISTTK-STSDISRSDFLPYLSAVADPLHRFHHIRNHATNEIIADLQPAAGEA 100
            ++P EFA +++TK   S+++RSDF  Y+S++++   RF  IR H   E     Q +    
Sbjct: 79   VAPAEFAPVASTKLPGSELTRSDFHGYVSSISESHGRFEDIRKHTREESCGFDQESHVSG 138

Query: 101  LVACLREVPSLYFKEDFRLEDGSTFRAACPFSAISENAALQEKLSQYLDVVELHLVKEIS 160
            L ACLREVPSLYFKEDF LEDG+TFR+ACPFS+++EN ALQEKLSQYLDVVELHLVKEIS
Sbjct: 139  LAACLREVPSLYFKEDFALEDGATFRSACPFSSLNENLALQEKLSQYLDVVELHLVKEIS 198

Query: 161  LRSSSFFEAQGQLQDLNAKIVEGCARIRELKDTVRLIDSDLVESARQIQXXXXXXXXXXX 220
            +RS SFFEAQGQLQDLN KIVEGC+RIRELK+T+RL+D +LV+SARQIQ           
Sbjct: 199  VRSDSFFEAQGQLQDLNVKIVEGCSRIRELKETIRLLDRNLVDSARQIQELSSTRINMLE 258

Query: 221  XXXXXXXXXYVNQXXXXXXXXXXXXDCAGAXXXXXXXXXXXXXXXXXXXHCFRHLRDHVI 280
                     YVNQ            DCAGA                   +CFRHLRDHV 
Sbjct: 259  LQRKLRLILYVNQALSALKLLVASADCAGALDITDDLQNLLAGDELTGLYCFRHLRDHVT 318

Query: 281  GFIESINSILSAEFIRASLHDATETDVIILSKAKARASLPMNGK-DDEVKLEEEETTNFK 339
              I+SINSIL++EF+R S+HD  E DV+ILS A  R S+  NG   +EVKLEEE+T+   
Sbjct: 319  SSIDSINSILTSEFMRISIHDTGEIDVLILSAANIRGSISSNGNTGEEVKLEEEDTSTLC 378

Query: 340  DRLLPTAIGLLRTAKLPSVLRFYRDTLTADMKSAIKTAVAELLPVLAARGSESEFFXXXX 399
            DRLLP  IGLLRTAK PS+LR YRDTLT++MK+AIK AVA+LLP+L AR  ES+F     
Sbjct: 379  DRLLPLVIGLLRTAKFPSILRMYRDTLTSEMKNAIKKAVADLLPILVARSLESDF-SHGE 437

Query: 400  XXXXXXXXXXXXXXXXXXXXDCFVHLLSAIFMIVQAHLVRAAEVKKAIEWILSNRDGHYX 459
                                + FV+LL+AIF IVQAHLVRA+EVKKAIEWIL N DGHY 
Sbjct: 438  RSVDDGGGLSLASKLRTLSSEAFVNLLTAIFKIVQAHLVRASEVKKAIEWILCNIDGHYA 497

Query: 460  XXXXXXXXXXXXXXXEISQESEIHGTTLLPYSPQRSVAKGP-FQGKTIDAVSSSNMSKNF 518
                           E +QE    G +L+     ++ +K P  QGK+ DA S  NMS+NF
Sbjct: 498  ADSVAAAIAVGAVAAETAQEIGFQGGSLVSSPLGKATSKAPPLQGKSSDASSLMNMSRNF 557

Query: 519  RADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITQEFITATEKIG 578
            RADVLREN EAVFAAC+  HGRWAKLLGVRA+LHP+LKLQEF++IY++TQEFIT+TEKIG
Sbjct: 558  RADVLRENTEAVFAACEVTHGRWAKLLGVRALLHPKLKLQEFMSIYDLTQEFITSTEKIG 617

Query: 579  GRLGYSIRGTLQSQAKAFVDFQHESRMAKIKALLDQETWVEIDVPEEFQSIINILFSSDV 638
            GRLG SIRGTLQSQAKAFVD QHESRM K+KA+LDQETW EIDVPEEFQSII+ LF+S  
Sbjct: 618  GRLGSSIRGTLQSQAKAFVDSQHESRMTKLKAVLDQETWDEIDVPEEFQSIISSLFASQR 677

Query: 639  LTSGNLNGTEEDNAHSYS-DNNADAVHSNAEHQVEQTNSIETSRKSAGSDGS--KPLVDS 695
            L SG ++  + ++ HS     N      + +   E  N    S + +    +  KP V  
Sbjct: 678  LISGKVDDADLNSYHSNRLPLNGSLTSGSGDQNSELRNEKSESSEGSVVSDAQVKPTVSP 737

Query: 696  VEPNRGNNRISSAQNNNV-EKDHKKSVSQALLYKGVGYHMVNCGLILLKMLSEYIDMNNV 754
                R    +SSA NN   +K H KS    L Y+GVGYHMVNCGLILLKMLSEYIDMNN 
Sbjct: 738  ESLERSKAGVSSATNNQSNQKAHGKS---NLFYQGVGYHMVNCGLILLKMLSEYIDMNNS 794

Query: 755  LPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIHAII 814
            LP LSSE+V RV E+L+FFNTRTCQLVLGAGAMQVSGLKSI +KHLALASQVI F + II
Sbjct: 795  LPALSSEIVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHLALASQVIDFTYTII 854

Query: 815  PEIRQILFLKVPETRKSLLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIV 874
            PE R+ILF KVPETRK LL  EID+VAQD+++HRDEI++KLVQIMRERLL HL GLP++V
Sbjct: 855  PETRRILFSKVPETRKPLLSVEIDKVAQDFRIHRDEIYTKLVQIMRERLLAHLHGLPKVV 914

Query: 875  ESWNRPEEADPQPSQFARSLTKEVGYLQRVLSRTLNDEDVHAIFRQVVIIFHSQISEAFS 934
            E WNRP + + Q  +FA  LT+EVGYL RVLS TL++ DV AIFRQV+ I H+Q S+  +
Sbjct: 915  EGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQVISIIHTQTSQTLT 974

Query: 935  RFDISTSQAQNRLSRDIKHILQCIRSLPSGDLGKSDTPNWGQLDEFLVQRF 985
              +IS+++A+ RL   ++ IL+CIRSLPS +  +SD PNWGQLDEF  + F
Sbjct: 975  NLEISSTEAKKRLKLHVELILKCIRSLPSDNANQSDIPNWGQLDEFFAEHF 1025


>AT4G19490.1 | Symbols: ATVPS54, VPS54 | VPS54 |
            chr4:10616017-10622934 FORWARD LENGTH=1034
          Length = 1034

 Score = 1056 bits (2732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/951 (57%), Positives = 664/951 (69%), Gaps = 11/951 (1%)

Query: 42   ISPPEFALISTTK-STSDISRSDFLPYLSAVADPLHRFHHIRNHATNEIIADLQPAAGEA 100
            ++P EFA +++TK   S+++RSDF  Y+S++++   RF  IR H   E     Q +    
Sbjct: 79   VAPAEFAPVASTKLPGSELTRSDFHGYVSSISESHGRFEDIRKHTREESCGFDQESHVSG 138

Query: 101  LVACLREVPSLYFKEDFRLEDGSTFRAACPFSAISENAALQEKLSQYLDVVELHLVKEIS 160
            L ACLREVPSLYFKEDF LEDG+TFR+ACPFS+++EN ALQEKLSQYLDVVELHLVKEIS
Sbjct: 139  LAACLREVPSLYFKEDFALEDGATFRSACPFSSLNENLALQEKLSQYLDVVELHLVKEIS 198

Query: 161  LRSSSFFEAQGQLQDLNAKIVEGCARIRELKDTVRLIDSDLVESARQIQXXXXXXXXXXX 220
            +RS SFFEAQGQLQDLN KIVEGC+RIRELK+T+RL+D +LV+SARQIQ           
Sbjct: 199  VRSDSFFEAQGQLQDLNVKIVEGCSRIRELKETIRLLDRNLVDSARQIQELSSTRINMLE 258

Query: 221  XXXXXXXXXYVNQXXXXXXXXXXXXDCAGAXXXXXXXXXXXXXXXXXXXHCFRHLRDHVI 280
                     YVNQ            DCAGA                   +CFRHLRDHV 
Sbjct: 259  LQRKLRLILYVNQALSALKLLVASADCAGALDITDDLQNLLAGDELTGLYCFRHLRDHVT 318

Query: 281  GFIESINSILSAEFIRASLHDATETDVIILSKAKARASLPMNGK-DDEVKLEEEETTNFK 339
              I+SINSIL++EF+R S+HD  E DV+ILS A  R S+  NG   +EVKLEEE+T+   
Sbjct: 319  SSIDSINSILTSEFMRISIHDTGEIDVLILSAANIRGSISSNGNTGEEVKLEEEDTSTLC 378

Query: 340  DRLLPTAIGLLRTAKLPSVLRFYRDTLTADMKSAIKTAVAELLPVLAARGSESEFFXXXX 399
            DRLLP  IGLLRTAK PS+LR YRDTLT++MK+AIK AVA+LLP+L AR  ES+F     
Sbjct: 379  DRLLPLVIGLLRTAKFPSILRMYRDTLTSEMKNAIKKAVADLLPILVARSLESDF-SHGE 437

Query: 400  XXXXXXXXXXXXXXXXXXXXDCFVHLLSAIFMIVQAHLVRAAEVKKAIEWILSNRDGHYX 459
                                + FV+LL+AIF IVQAHLVRA+EVKKAIEWIL N DGHY 
Sbjct: 438  RSVDDGGGLSLASKLRTLSSEAFVNLLTAIFKIVQAHLVRASEVKKAIEWILCNIDGHYA 497

Query: 460  XXXXXXXXXXXXXXXEISQESEIHGTTLLPYSPQRSVAKGP-FQGKTIDAVSSSNMSKNF 518
                           E +QE    G +L+     ++ +K P  QGK+ DA S  NMS+NF
Sbjct: 498  ADSVAAAIAVGAVAAETAQEIGFQGGSLVSSPLGKATSKAPPLQGKSSDASSLMNMSRNF 557

Query: 519  RADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITQEFITATEKIG 578
            RADVLREN EAVFAAC+  HGRWAKLLGVRA+LHP+LKLQEF++IY++TQEFIT+TEKIG
Sbjct: 558  RADVLRENTEAVFAACEVTHGRWAKLLGVRALLHPKLKLQEFMSIYDLTQEFITSTEKIG 617

Query: 579  GRLGYSIRGTLQSQAKAFVDFQHESRMAKIKALLDQETWVEIDVPEEFQSIINILFSSDV 638
            GRLG SIRGTLQSQAKAFVD QHESRM K+KA+LDQETW EIDVPEEFQSII+ LF+S  
Sbjct: 618  GRLGSSIRGTLQSQAKAFVDSQHESRMTKLKAVLDQETWDEIDVPEEFQSIISSLFASQR 677

Query: 639  LTSGNLNGTEEDNAHSYS-DNNADAVHSNAEHQVEQTNSIETSRKSAGSDGS--KPLVDS 695
            L SG ++  + ++ HS     N      + +   E  N    S + +    +  KP V  
Sbjct: 678  LISGKVDDADLNSYHSNRLPLNGSLTSGSGDQNSELRNEKSESSEGSVVSDAQVKPTVSP 737

Query: 696  VEPNRGNNRISSAQNNNV-EKDHKKSVSQALLYKGVGYHMVNCGLILLKMLSEYIDMNNV 754
                R    +SSA NN   +K H KS    L Y+GVGYHMVNCGLILLKMLSEYIDMNN 
Sbjct: 738  ESLERSKAGVSSATNNQSNQKAHGKS---NLFYQGVGYHMVNCGLILLKMLSEYIDMNNS 794

Query: 755  LPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIHAII 814
            LP LSSE+V RV E+L+FFNTRTCQLVLGAGAMQVSGLKSI +KHLALASQVI F + II
Sbjct: 795  LPALSSEIVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHLALASQVIDFTYTII 854

Query: 815  PEIRQILFLKVPETRKSLLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIV 874
            PE R+ILF KVPETRK LL  EID+VAQD+++HRDEI++KLVQIMRERLL HL GLP++V
Sbjct: 855  PETRRILFSKVPETRKPLLSVEIDKVAQDFRIHRDEIYTKLVQIMRERLLAHLHGLPKVV 914

Query: 875  ESWNRPEEADPQPSQFARSLTKEVGYLQRVLSRTLNDEDVHAIFRQVVIIFHSQISEAFS 934
            E WNRP + + Q  +FA  LT+EVGYL RVLS TL++ DV AIFRQV+ I H+Q S+  +
Sbjct: 915  EGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQVISIIHTQTSQTLT 974

Query: 935  RFDISTSQAQNRLSRDIKHILQCIRSLPSGDLGKSDTPNWGQLDEFLVQRF 985
              +IS+++A+ RL   ++ IL+CIRSLPS +  +SD PNWGQLDEF  + F
Sbjct: 975  NLEISSTEAKKRLKLHVELILKCIRSLPSDNANQSDIPNWGQLDEFFAEHF 1025