Miyakogusa Predicted Gene

Lj0g3v0050309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0050309.1 tr|C6A1E9|C6A1E9_THESM D-tyrosyl-tRNA(Tyr)
deacylase OS=Thermococcus sibiricus (strain MM 739 / DSM
,28.81,2e-18,AF0625-like,NULL; tRNA_deacylase,D-aminoacyl-tRNA
deacylase; seg,NULL,NODE_51073_length_1284_cov_30.117601.path2.1
         (316 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases | chr2...   472   e-133

>AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases |
           chr2:1156782-1158695 FORWARD LENGTH=317
          Length = 317

 Score =  472 bits (1214), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 228/318 (71%), Positives = 263/318 (82%), Gaps = 5/318 (1%)

Query: 1   MVALLVATRSDSASINPANALLAMPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDL 60
           MV L+VAT +D ASINPA ALLAMPGW  GP    D+KSF N++ RV+ H +SIV EDDL
Sbjct: 1   MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 61  DKRWEEVTGEVVDEVIFFSKHTAVSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 120
           D RWEE TGEVVDEVIF S+HTAVSN+PALTVHPIGV HL++G+ PPQGGKPGWAALP+ 
Sbjct: 61  DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPST 120

Query: 121 RMGPWLRLLKKIAEARNLVPEFEITLEATHHGPVTNKPTMFLEIGSTDDYWKRLDAAEVM 180
           R+GPW RLLKK+AEA  LVPEFEITLEATHHGP+TNKPTMFLEIGST++YWKR DAA+VM
Sbjct: 121 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRQDAAQVM 180

Query: 181 AQLVWEXXXXXXXTDIGNWGRENDKKKVLLGIGGGHYAPRHMDVVLKDDVWVGHLLSGYS 240
           A L+WE        ++G W  E  K+KVLLGIGGGHYAPRHMD+ LKDD+WVGHLLSGYS
Sbjct: 181 ALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGYS 240

Query: 241 LPMEDPNNAK---GERNTEIGGTWKESIKAAYEASKSAFPGGEILAHLDHKSFKGWQKNA 297
           LPMEDP   K   GE    IGG W++SIKAA+EA+K++FPGGEILAHLDHKSFKGWQK A
Sbjct: 241 LPMEDPTQTKTTPGENY--IGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQKKA 298

Query: 298 ITGFLTEQNIKIGKPNNF 315
           IT FL E++I +GKPN+F
Sbjct: 299 ITEFLAEESINVGKPNDF 316