Miyakogusa Predicted Gene

Lj0g3v0050209.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0050209.1 Non Chatacterized Hit- tr|G7LFS3|G7LFS3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,82.54,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_28042_length_1406_cov_132.628738.path1.1
         (189 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24290.2 | Symbols:  | MAC/Perforin domain-containing protein...   220   5e-58
AT1G28380.1 | Symbols: NSL1 | MAC/Perforin domain-containing pro...   147   6e-36
AT1G14780.1 | Symbols:  | MAC/Perforin domain-containing protein...   134   4e-32
AT1G29690.1 | Symbols: CAD1 | MAC/Perforin domain-containing pro...   113   6e-26

>AT4G24290.2 | Symbols:  | MAC/Perforin domain-containing protein |
           chr4:12594856-12597815 FORWARD LENGTH=606
          Length = 606

 Score =  220 bits (560), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 131/175 (74%), Gaps = 4/175 (2%)

Query: 11  SSERKYYEKVQWKSFSHVCTAPVESDGENSVVTGARFEVGESGLKKVLFLRLHFSKVAGA 70
           S +R+YYEKV WK++SHVCT PVESD + SVVTGA+  V   G K VLFLRL FS+V GA
Sbjct: 427 SHDRRYYEKVNWKNYSHVCTEPVESDDDLSVVTGAQLHVESHGFKNVLFLRLCFSRVVGA 486

Query: 71  TRSK-AEWDGSPGLTQRSGIISTFISTTFSGXXXXXXXXXXXSDVNINSALYPGGPPVAA 129
           T  K +EWD + G   +SG+IST IS  F+            +DVNINSA+YPGGPPV  
Sbjct: 487 TLVKNSEWDEAVGFAPKSGLISTLISHHFTAAQKPPPRP---ADVNINSAIYPGGPPVPT 543

Query: 130 QSTKLLRFVDTTEMTRGPQDSPGYWVVSGARLYVEKGKISLKVKYSLKTVILPDE 184
           Q+ KLL+FVDT+EMTRGPQ+SPGYWVVSGARL VEKGKISLKVKYSL T IL DE
Sbjct: 544 QAPKLLKFVDTSEMTRGPQESPGYWVVSGARLLVEKGKISLKVKYSLFTPILGDE 598


>AT1G28380.1 | Symbols: NSL1 | MAC/Perforin domain-containing
           protein | chr1:9963696-9966060 FORWARD LENGTH=612
          Length = 612

 Score =  147 bits (370), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/178 (47%), Positives = 107/178 (60%), Gaps = 10/178 (5%)

Query: 13  ERKYYEKVQWKSFSHVCTAPVE-----SDGENSVVTGARFEVGESGLKKVLFLRLHFSKV 67
           E+ YY  V+W  FSHVCT PV+     SD   S+VT A  EV   G++KVLFLRL FS  
Sbjct: 435 EKGYYVPVKWGIFSHVCTYPVQYNGARSDDTASIVTKAWLEVKGMGMRKVLFLRLGFSLD 494

Query: 68  AGATRSKAEWDGSPGLTQRSGIISTFISTTFSGXXXXXXXXXXXSDVNINSALYPGGP-- 125
           A A   K+ WD     +++SG+ S   +   +G           S ++INSA+YP GP  
Sbjct: 495 ASAVTRKSCWDNLSTNSRKSGVFSMISTRLSTGLSPNPATTKPQSKIDINSAVYPRGPSP 554

Query: 126 PVAAQSTKLLRFVDTTEMTRGPQDSPGYWVVSGARLYVEKGKISLKVKYSLKTVILPD 183
           PV     KLL  VDT E+ RGP++ PGYWVV+GA+L VE GKIS+K KYSL TVI  D
Sbjct: 555 PVKP---KLLSLVDTKEVMRGPEEQPGYWVVTGAKLCVEAGKISIKAKYSLLTVISED 609


>AT1G14780.1 | Symbols:  | MAC/Perforin domain-containing protein |
           chr1:5091020-5093873 FORWARD LENGTH=627
          Length = 627

 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 107/177 (60%), Gaps = 16/177 (9%)

Query: 15  KYYEKVQWKSFSHVCTAPVESD-----------GENSV---VTGARFEVGESGLKKVLFL 60
           +Y+E +  K FSHVCT PV+ D            +N V   VTGA+ EV + G K VL L
Sbjct: 442 RYFEPLNGKKFSHVCTVPVKYDPNWIKTTSNHKSQNDVAFIVTGAQLEVKKHGSKSVLHL 501

Query: 61  RLHFSKVAGATRSKAEWDGSP-GLTQRSGIISTFISTTFSGXXXXXXXXXXXSDVNINSA 119
           RL ++KV+     +  W   P G +Q+SGI S+      SG           ++V ++S 
Sbjct: 502 RLRYTKVSDHYVVQNSWVHGPIGTSQKSGIFSSMSMPLTSGSVHHNMIQKDKNEVVLDSG 561

Query: 120 LYPGGPPVAAQSTKLLRFVDTTEMTRGPQDSPGYWVVSGARLYVEKGKISLKVKYSL 176
           ++PGGPPV A + K+++FVD +++ RGPQ SPG+W+V+G RLY++KGK+ L VK++L
Sbjct: 562 VFPGGPPVPANN-KIVKFVDLSQLCRGPQHSPGHWLVTGVRLYLDKGKLCLHVKFAL 617


>AT1G29690.1 | Symbols: CAD1 | MAC/Perforin domain-containing
           protein | chr1:10379310-10381861 REVERSE LENGTH=561
          Length = 561

 Score =  113 bits (283), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 46/187 (24%)

Query: 4   PNGNVPHSSERKYYEKVQWKSFSHVCTAPVESDGEN-------SVVTGARFEVGESGLKK 56
           P    P   + +++E ++WK+FSHV T+P+E    +        +VTGA+  V + G K 
Sbjct: 404 PKWQGPEEQDSRWFEPIKWKNFSHVSTSPIEHTETHIGDLSGVHIVTGAQLGVWDFGSKN 463

Query: 57  VLFLRLHFSKVAGATRSKAEWDGSPGLTQRSGIISTFISTTFSGXXXXXXXXXXXSDVNI 116
           VL L+L FSKV G T  ++ WD +P                                V  
Sbjct: 464 VLHLKLLFSKVPGCTIRRSVWDHTP--------------------------------VAS 491

Query: 117 NSALYPGGPPVA-------AQSTKLLRFVDTTEMTRGPQDSPGYWVVSGARLYVEKGKIS 169
           +  L PGGP  +        QS KL + VD++EM +GPQD PG+W+V+GA+L VEKGKI 
Sbjct: 492 SGRLEPGGPSTSSSTEEVSGQSGKLAKIVDSSEMLKGPQDLPGHWLVTGAKLGVEKGKIV 551

Query: 170 LKVKYSL 176
           L+VKYSL
Sbjct: 552 LRVKYSL 558