Miyakogusa Predicted Gene
- Lj0g3v0049089.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0049089.1 Non Chatacterized Hit- tr|I1NKV0|I1NKV0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,27.78,8e-17,FAMILY NOT NAMED,NULL; seg,NULL;
Frigida,Frigida-like,CUFF.2385.1
(531 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22440.1 | Symbols: | FRIGIDA-like protein | chr3:7959854-79... 234 2e-61
AT4G14900.1 | Symbols: | FRIGIDA-like protein | chr4:8521759-85... 227 1e-59
AT5G48385.1 | Symbols: | FRIGIDA-like protein | chr5:19609471-1... 143 4e-34
AT5G16320.1 | Symbols: FRL1 | FRIGIDA like 1 | chr5:5344507-5345... 126 5e-29
AT1G31814.1 | Symbols: FRL2 | FRIGIDA like 2 | chr1:11412985-114... 102 7e-22
AT5G27230.1 | Symbols: | Frigida-like protein | chr5:9584255-95... 69 1e-11
>AT3G22440.1 | Symbols: | FRIGIDA-like protein |
chr3:7959854-7961886 FORWARD LENGTH=532
Length = 532
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 231/410 (56%), Gaps = 36/410 (8%)
Query: 18 FQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLESLNTH 77
F+E Q S++ +CT L+ LS HF+SL+ +L +K+++L+ +TLD+ +LESL
Sbjct: 18 FEEFQKQTSLMTSCTLLWQELSDHFTSLEQNLMKKSEALKQMIETLDNQTQTSLESLKRR 77
Query: 78 ETSIPERESAAAARIDEQKEAAIAEFRNP--------------LPSDSELPATLKSLSRK 123
E +I A ++ E+ AA+ + + L + LKSL K
Sbjct: 78 EVTIDHSVEIVAGKVGERARAALESLEKARDGCGDGSNDDSGDVDDEEGLLSALKSLCLK 137
Query: 124 MDSSALLRFIVSKRKESSWLRAEIAPAIAEAVDPPKLVLDAVEEFLNSKMMGSKSGLTDK 183
MD+ F+ +++KE LR++I A+ + VDP LVL+A+ E G K D
Sbjct: 138 MDARGFWNFVTARKKELENLRSKIPAALVDCVDPAMLVLEAISEVFPVDTRGDKVS-NDY 196
Query: 184 RWACGLLVQALS----SDSPGFSRRVV-----ERAVGLLDSWKEQMDSDTEKGAAEVV-- 232
WAC +++++L+ G SR +V E+A + ++WK+ ++ E+G E V
Sbjct: 197 GWACVVILESLTPVIVDPVIGKSRLLVTPSVKEKAKEIAETWKKSLE---ERGRIENVKT 253
Query: 233 ----MFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEMIEIIEELVKN 288
F+Q +V FG+ D RKLV+ R+ M KLA S+ GD+M ++IEEL+
Sbjct: 254 PDVHTFLQHLVTFGIVKSEDLALYRKLVVGSAWRKQMPKLAVSVGLGDQMPDMIEELISR 313
Query: 289 GQEIEAVYFASESGLTEKFPPIDLLKSYVRNYKKNVATILAKGNNSQAATDESSTLEMNS 348
GQ+++AV+F E GL +KFPP+ LLK+Y+R+ KK+ A+I+ +N+ AT + E ++
Sbjct: 314 GQQLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKKSAASIMEDSSNTGRATHLVARKEQSA 373
Query: 349 IRAIIRCVEDHKLESEFSLDKLRKRVTHLGRTKAERKRSSSTVIRPPKKR 398
++A+++C+E++KLE EF + L+KR+ L +TK E+++ ++ P KR
Sbjct: 374 LKAVLKCIEEYKLEEEFPPENLKKRLDQLEKTKTEKRKPAAV---PANKR 420
>AT4G14900.1 | Symbols: | FRIGIDA-like protein |
chr4:8521759-8523607 REVERSE LENGTH=532
Length = 532
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 225/407 (55%), Gaps = 32/407 (7%)
Query: 18 FQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLESLNTH 77
F E Q S++ +C L+ LS HF+S++ +L +K+++L +TLD+ ++E L
Sbjct: 18 FFEFQKQASLMTSCNLLWKELSEHFTSMEQNLMKKSEALRQMIETLDNQTQSSIELLKHR 77
Query: 78 ETSIPERESAAAARIDEQKEAAIAEFRNPLPSDSE----------LPATLKSLSRKMDSS 127
E +I A +++E+ AA+ E L + LKSL KMD+
Sbjct: 78 EVTIDHSVEIAEGKVEERVRAALDSLEKARDCGDEDTGEVDDGDGLLSALKSLCLKMDAR 137
Query: 128 ALLRFIVSKRKESSWLRAEIAPAIAEAVDPPKLVLDAVEE-FLNSKMMGSKSGLTDKRWA 186
F+++++KE LR++I A+ + VDPPKLVL+AV E F K G + D WA
Sbjct: 138 GFWGFVIARKKELENLRSQIPVALVDCVDPPKLVLEAVSEVFPVDKRGGGEKVSNDFGWA 197
Query: 187 CGLLVQAL----SSDSPGFSRRVV-----ERAVGLLDSWKEQMDSDTEKGAAEVV----- 232
C +++++L G SR +V E+A + ++WK ++ E+G E V
Sbjct: 198 CVVILESLIPVMVDPVMGKSRLLVTPSVKEKAKEIAETWKASLE---ERGGIENVKTPDV 254
Query: 233 -MFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEMIEIIEELVKNGQE 291
F+Q +V FG+ + D RKLV+ R+ M KLA S+ GD+M ++IEEL+ GQ+
Sbjct: 255 HTFLQHLVTFGIVKKDDLALYRKLVVGSAWRKQMPKLAVSVGLGDQMPDMIEELIIRGQQ 314
Query: 292 IEAVYFASESGLTEKFPPIDLLKSYVRNYKKNVATILAKGNNSQAATDESSTLEMNSIRA 351
++AV+F E GL FPP+ LLK+Y+R+ KK A I NNS + + E +++RA
Sbjct: 315 LDAVHFTFEVGLVHLFPPVPLLKAYLRDAKKATALITDDSNNSGRSAHLVARKEQSALRA 374
Query: 352 IIRCVEDHKLESEFSLDKLRKRVTHLGRTKAERKRSSSTVIRPPKKR 398
+++C+E++KLE EF + L+KR+ L +TK E+++ + + P KR
Sbjct: 375 VLKCIEEYKLEEEFPPENLKKRLDQLEKTKTEKRKPA---VIPANKR 418
>AT5G48385.1 | Symbols: | FRIGIDA-like protein |
chr5:19609471-19611712 FORWARD LENGTH=558
Length = 558
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 19/301 (6%)
Query: 114 PATLKSLSRKMDSSALLRFIVSKRKESSWLRAEIAPAIAEAVDPPKLVLDAVEEF--LNS 171
P LK L MDS+ L +F+ RK + L+ EI A A +P LVLD++E F + +
Sbjct: 173 PQLLK-LCGDMDSTGLHKFVSDNRKNLASLKEEIPMAFRAAANPASLVLDSLEGFYPMEA 231
Query: 172 KMMGSK--SGLTDKRWACGLLVQALSSDSPGFSRR---------VVERAVGLLDSWK--- 217
K + L R C +L++ LS G R V RA + + W
Sbjct: 232 PTADGKKDANLLGMRRTCIMLMECLSILLSGLDRNCLAVVLSQNVKHRAKTIAEGWNPLL 291
Query: 218 EQMDSDTEKG-AAEVVMFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGD 276
E +D D G + E F+Q++ F + + F E+ L KL+ RR A+L SL +
Sbjct: 292 ESLDMDACNGNSLEAHAFLQLLATFAIVADFKEDELLKLIPMVSRRRQAAELCRSLGLAE 351
Query: 277 EMIEIIEELVKNGQEIEAVYFASESGLTEKFPPIDLLKSYVRNYKKNVATILAKGNNSQA 336
+M +IE LV +G++I+AV A LTE+F P+ LLKSY+ +++ + GN S A
Sbjct: 352 KMPGVIEVLVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEARRS-SPQGRPGNASPA 410
Query: 337 ATDESSTLEMNSIRAIIRCVEDHKLESEFSLDKLRKRVTHLGRTKAERKRSSSTVIRPPK 396
DE + E+ ++ +I+C+E+H LE ++ ++ L KR+ L + KA++KR++ + PK
Sbjct: 411 VQDEFNERELIGLKTVIKCIEEHSLEEQYPVEPLHKRILQLEKAKADKKRATEPMKPQPK 470
Query: 397 K 397
+
Sbjct: 471 R 471
>AT5G16320.1 | Symbols: FRL1 | FRIGIDA like 1 | chr5:5344507-5345919
FORWARD LENGTH=470
Length = 470
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 197/389 (50%), Gaps = 37/389 (9%)
Query: 12 DRVEQFFQELQTHKSIIATCTDLFTT-LSTHFSSLQHSLSEKTQSLESKFQTLDSHYNET 70
+++++ F +LQ H+S+++ L + + +HFSSLQ SL+ S+F+ L
Sbjct: 19 EKLKKAFDDLQAHRSLLSPSFSLSWSEIDSHFSSLQSSLA-------SRFRLL------- 64
Query: 71 LESLNTHETSIPERESAAAARIDEQKEAAIAEFRNPLPSDSELPATLKSLSRKMDSSALL 130
H TS E +S RID +A + + + L++L K+D L+
Sbjct: 65 ------HSTSPLEHDSY---RIDAS-DAGKSSSSEEVSEQPVVEPELRALCEKIDGIGLI 114
Query: 131 RFIVSKRKESSWLRAEIAPAIAEAVDPPKLVLDAVEEFLNSKMMGSKSGLT-DKRWACGL 189
++++ + + L E++ AI + D +VLDA+E S S SG + D R L
Sbjct: 115 KYLIRIWDDETPLNQEVSAAIRYSPDTASMVLDAIE---GSNYTPSSSGRSFDVRRVFVL 171
Query: 190 LVQALSSDSPGFSRRVVERAVGLLDSWKEQMDSDTEKGAAEVVMFMQMVVCFGLRSRFDE 249
L++ L + + RA L WK ++ E ++F+ +V F L S FD
Sbjct: 172 LMEVLIEINANITVDTRNRAKKLAYHWKSKVGVK----PFEALVFLHLVAAFELGSEFDT 227
Query: 250 EYLRKLVMEFGTRRDMAKLAASLDFGDEMI-EIIEELVKNGQEIEAVYFASESGLTEKFP 308
E L V + + + + + ++I+ L+ +G+ I AV F E G+T++F
Sbjct: 228 EELSDYVFMIAKYKQATLVCNKIGVDRKRVGKLIKTLLDSGKPILAVKFMYECGMTDEFE 287
Query: 309 PIDLLKSYVRNYKKNVATILAKGNNSQAATDESSTLEMNSIRAIIRCVEDHKLESEFSLD 368
PI +LKSY+++ ++ + + N S + +E+S E+++++ +I+ ++D LESEF+ +
Sbjct: 288 PIPVLKSYIKDCREAALRVCVEDNYSLKSQNEASDKEVSALKPLIKIIKDQNLESEFTQE 347
Query: 369 KLRKRVTHLGRTKAERKRSSSTVIRPPKK 397
K+ +RV L + KA RKR+++ PPK+
Sbjct: 348 KVEERVEELEKNKALRKRNTTN---PPKQ 373
>AT1G31814.1 | Symbols: FRL2 | FRIGIDA like 2 |
chr1:11412985-11414406 REVERSE LENGTH=473
Length = 473
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 179/380 (47%), Gaps = 43/380 (11%)
Query: 13 RVEQFFQELQTHKSIIATCTDL-FTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETL 71
++++ F +LQ H+S+++ +L ++ + +HFSSLQ SL + L+S + +S ET
Sbjct: 20 KLKKAFDDLQAHRSLLSPSFNLSWSEIDSHFSSLQSSLFNR---LQSAVTSSNSGNIETP 76
Query: 72 ESLNTHETSIPERESAAAARIDEQKEAAIAEFRNPLPSDSELPATLKSLSRKMDSSALLR 131
++ T ET + L L+ K D L
Sbjct: 77 TAVTT-ETPV-------------------------------LWPELRKFCEKNDGKGLGN 104
Query: 132 FIVSKRKESSWLRAEIAPAIAEAVDPPKLVLDAVEE--FLNSKMMGSKSGLTDKRWACGL 189
+++ ++ + E+ AI + +P LVLDA+E +S S + D + L
Sbjct: 105 YMIENSRKRLSINEELPNAIRCSENPAPLVLDAIEGSYHCSSPSSSSSARAIDVKRIFVL 164
Query: 190 LVQALSSDSPGFSRRVVERAVGLLDSWKEQMDSDTEKGAAEVVMFMQMVVCFGLRSRFDE 249
L++AL + + + ERA + WK + + +E + F+ +V F L S F
Sbjct: 165 LLEALIEINANLTNDLRERARTIAYDWKPNIGNK----PSEALGFLHLVAAFELGSLFST 220
Query: 250 EYLRKLVMEFGTRRDMAKLAASLDFGDEMIEI-IEELVKNGQEIEAVYFASESGLTEKFP 308
E + + + + + I + +++ + G+ + A+ F E+ + +F
Sbjct: 221 EEICDYIFLISKYKQATTICKKIGLDRNRIGVLVQKFLDTGRLLVAIRFIYENEMVGEFE 280
Query: 309 PIDLLKSYVRNYKKNVATILAKGNNSQAATDESSTLEMNSIRAIIRCVEDHKLESEFSLD 368
P+ +LK+ ++N ++ + A+GN S +E++ E++++RA+I+ V++ +ESEF +
Sbjct: 281 PVSILKTSLKNSREAAKRVCAEGNYSLKVQNEATDKELSALRAVIKVVKEKNIESEFMEE 340
Query: 369 KLRKRVTHLGRTKAERKRSS 388
KL + V L KA+RKR++
Sbjct: 341 KLEECVKELEDQKAQRKRAT 360
>AT5G27230.1 | Symbols: | Frigida-like protein |
chr5:9584255-9587838 FORWARD LENGTH=948
Length = 948
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 108 PSDSELPATLKSLSRKMDSSALLRFIVSKR--KESSWLRAEIAPAIAEAVDPPKLVLDAV 165
PS +E + S S K D +LR +V K+ KES +++ A+ DP KL LD
Sbjct: 534 PSGTETKLNILSGSIKAD---MLRELVEKQPLKESE----DLSNALKCTPDPAKLFLDTS 586
Query: 166 EEFLNSKMMGS---KSGLTDKRWACGLLVQALSSDSPGFSRRVVERAVGLLDSWKEQMDS 222
+ G K +T +C LL+ L P V A L WK+++ +
Sbjct: 587 MALCPTNTEGGYEFKMLITSA--SCSLLLNQLKKLLPKIGHPVKGDAKKLAVYWKDKI-A 643
Query: 223 DTEKGAAEVVMFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEMIEII 282
+++ EV+ F+Q + FG+ S F + L L+ + L L D + I
Sbjct: 644 KSKRDQLEVICFLQFLGIFGIVSEFKADDLLGLLDNSYWQTVSPDLCQFLGLDDAIPGFI 703
Query: 283 EELVKNGQEIEAVYFASESGLTEKFPPID-LLKSYVRNYKKNVATILAKGNNSQAATDES 341
+ L+K G I+A+ + G+ +F P+ ++ +R K++ + N +
Sbjct: 704 QNLIKTGHRIKAIDYIYSFGMVHRFQPVSAIINDSLRITKESAEKSYREAKNESTTQVAA 763
Query: 342 STLEMNSIRAIIRCVEDHKLESEFSLDKLRKRVTHL 377
++ ++RA I+C+ HKLESEF L L +++ L
Sbjct: 764 IDRQVRALRAAIKCISCHKLESEFQLGDLEEQIKSL 799