Miyakogusa Predicted Gene
- Lj0g3v0048609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0048609.1 tr|A9T938|A9T938_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_192787,28.45,7e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; no description,Tetratricopeptide-like
,CUFF.2258.1
(699 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 379 e-105
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 376 e-104
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 370 e-102
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 368 e-102
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 1e-99
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 359 4e-99
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 357 2e-98
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 3e-96
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 348 8e-96
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 348 8e-96
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 1e-95
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 340 2e-93
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 337 2e-92
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 2e-91
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 332 5e-91
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 5e-91
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 332 7e-91
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 4e-89
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 5e-89
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 3e-88
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 4e-88
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 1e-87
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 317 3e-86
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 6e-86
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 5e-85
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 3e-84
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 308 9e-84
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 7e-82
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 7e-82
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 7e-82
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 6e-81
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 6e-78
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 288 1e-77
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 287 2e-77
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 5e-77
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 6e-77
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 4e-76
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 5e-76
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 9e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 4e-74
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 2e-73
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 273 3e-73
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 6e-73
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 271 2e-72
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 270 2e-72
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 4e-72
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 267 2e-71
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 267 2e-71
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 267 2e-71
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 4e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 262 5e-70
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 6e-70
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 8e-70
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 261 1e-69
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 258 9e-69
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 255 7e-68
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 253 4e-67
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 4e-67
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 248 1e-65
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 247 2e-65
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 245 7e-65
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 241 1e-63
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 241 2e-63
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 240 2e-63
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 234 1e-61
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 5e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 231 1e-60
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 8e-57
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 8e-55
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 8e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 8e-52
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 9e-52
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 7e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 9e-49
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 9e-47
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-27
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 114 2e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 5e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 106 6e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 9e-22
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 8e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 1e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 93 7e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 93 8e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 92 1e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 4e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 9e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 85 2e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 84 3e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 4e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 6e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 1e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 72 2e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 9e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 66 1e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 65 2e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 3e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 63 5e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 7e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 8e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 8e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 6e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 6e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/664 (34%), Positives = 371/664 (55%), Gaps = 11/664 (1%)
Query: 37 SLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC--FVGSSLIRLYSEYGKLEDA 94
S D S +K+CVAL + G D++ +L DC FV SSLI+ Y EYGK++
Sbjct: 135 SPDVSTFPCLVKACVALKNFK-GIDFLSDTVS-SLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 95 HRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAA 154
++FD + KD V + ++ YA G + + S M+ ++ PN VT +L A
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGA--LDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 155 KLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 214
+ G +HG + G I + +LL MY KCG A+ +F M+ T +
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSI-KNSLLSMYSKCGRFDDASKLFRMMSRADTV--T 307
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN +I+ Y+ +G E+ F +MI VLPD +T ++ + S ++ + L + K IH Y++
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 275 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
R + D+ +AL+D Y K V+ A+ +F + + D V++ M++GYL N L ++++
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
+F ++K+ +SPN ++++ + L ++L R +HG++++ + R I +I YA
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 394 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 453
KCG + A +F R+ RD+VSW SMIT + AI +FR + + D V++ +
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
L A + L S K +H + ++ ++LI YAKCG L A +F+ M E+
Sbjct: 548 ALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIF 572
+ SWN+++ A HG + L LF+ M + I+PD++TF I+++C H G V+EG++ F
Sbjct: 608 IVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFF 667
Query: 573 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 632
RSM +Y I P + HY C++DL RAG+LTEAY VKSMP + TLL ACRL+ +
Sbjct: 668 RSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKN 727
Query: 633 TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
E+ E + +++ L+P NS YVLISN A W+ V +R++ K++E++ PGYS IE
Sbjct: 728 VELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
Query: 693 LDKQ 696
++K+
Sbjct: 788 INKR 791
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/665 (23%), Positives = 329/665 (49%), Gaps = 20/665 (3%)
Query: 26 RRYLDLKNSKFSLDCSA---ITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
++ L L+NS L+ + ++L L++C L GK+VH I +++ D + ++
Sbjct: 18 KKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERIL 77
Query: 83 RLYSEYGKLEDAHRVFD--EITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
+Y+ G D ++F ++ + + SII+++ +G + A M +
Sbjct: 78 GMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNG--LLNQALAFYFKMLCFGVS 135
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ T L+ A L + + + G C+E ++L+ Y + G + + +
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMD-CNEFVASSLIKAYLEYGKIDVPSK 194
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
+F ++ + WN ++ Y G + F M ++ P+ +T + CA
Sbjct: 195 LFDRVLQKDCVI--WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNV 317
+ G +HG ++ GV+ + +L+ +YSK FD A K+F + D V +N
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD--DASKLFRMMSRADTVTWNC 310
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
M++GY+++ L E++ F+EMI V P+ F +L+ +VS ++ + IH Y++RH
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
+ + + +I Y KC + A+ +F++ S D+V +T+MI+GY+H+G +++ +FR
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 497
L + + + +TL+S+L + L L +E+H + ++ ++I YAKCG
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 498 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 557
++N+A +F+++++R + SWN+M+ A N + + +F M + I D ++ ++ L+
Sbjct: 491 RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 558 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 617
AC++ G I MI+ +++ + +ID+ ++ G L A N+ K+M +
Sbjct: 551 ACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM-KEKNI 608
Query: 618 AALCTLLSACRLYGDTEIGEAIAKQILK---LEPRNSSSYVLISNILAEGGRWDEVAHIR 674
+ ++++AC +G + + ++++ + P + +IS+ G + V R
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 675 AMTKD 679
+MT+D
Sbjct: 669 SMTED 673
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/651 (24%), Positives = 312/651 (47%), Gaps = 29/651 (4%)
Query: 24 VLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIR 83
V++ + ++ + S + L C + ++ G ++H + ++ + + +SL+
Sbjct: 223 VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLS 282
Query: 84 LYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNR 143
+YS+ G+ +DA ++F ++ D V + +I+ Y SG + + M + P+
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG--LMEESLTFFYEMISSGVLPDA 340
Query: 144 VTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFG 203
+T SLL + +K +L+ + IH Y +R + D + L+D Y KC GV MA +F
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 204 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 263
+ N+ V + +I+ YLHNG +++ E+FR ++ K+ P+ +TL + + L L
Sbjct: 400 QCNSVDVVV--FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 264 CHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGY 322
G+ +HG++I+ G + A++D+Y+K + A ++FERL +D V +N M+T
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 382
++D P AI++F +M + + +SA ++L ++IHG++++H + V
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 383 EIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQR 441
+ +I YAKCG L+ A VF M+ +++VSW S+I +HG + +++ LF ++++
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 442 ENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+R D +T + ++ + +G + V+ +T + ++ + + G+L
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697
Query: 501 MARYLFQQMT-ERCLTSWNAMLGAYAMHGNY--AEVLKLFNHMKLGNIKPDELTFTSILT 557
A + M W +LGA +H N AEV KL ++ P + +++
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVAS----SKLMDLDPSNSGYYVLIS 753
Query: 558 ACSHSGLVEEGLQIFRSMIREYTI--VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
+ E + RS+++E + +PG I++ R V S+H
Sbjct: 754 NAHANAREWESVTKVRSLMKEREVQKIPGYSW----IEINKRTHLFVSGD--VNHPESSH 807
Query: 616 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 666
+ L +LL RL G I + L L P +S +S + + R
Sbjct: 808 IYSLLNSLLGELRLEG------YIPQPYLPLHPESSRKVYPVSRFIEKEMR 852
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 189/354 (53%), Gaps = 13/354 (3%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L + ++ +S D + L S LE+ K++H ++ +++ D F+ S+LI
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
Y + + A +F + + D+V +T++I+ Y H+G + + + ++ PN
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG--LYIDSLEMFRWLVKVKISPN 440
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF-GVCDEIFETTLLDMYHKCGGVKMAAAV 201
+TLVS+L L +L+ GR +HG+ I++GF C+ ++DMY KCG + +A +
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCN--IGCAVIDMYAKCGRMNLAYEI 498
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F ++ + + SWN +I + A ++FRQM + D ++++ A+ +CA L
Sbjct: 499 FERL--SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 320
GK+IHG+MI+ + D+ + + L+D+Y+K ++ A +F+ ++ K+ V +N ++
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 321 GYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRD----IRLARSI 369
+ +++ +FHEM++ S + P+ FL +IS+ + D +R RS+
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/693 (31%), Positives = 376/693 (54%), Gaps = 33/693 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF-VGSSL 81
E + Y+D+ D A LK+ L +E GK++H K D V ++L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIA----STMQDQ 137
+ LY + G ++VFD I+ ++ V++ S+I++ C + + +A M D+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL------CSFEKWEMALEAFRCMLDE 193
Query: 138 RLYPNRVTLVSLLHAAAKLG---SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+ P+ TLVS++ A + L L G+ +H Y +R+G + TL+ MY K G
Sbjct: 194 NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIINTLVAMYGKLGK 251
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
+ + + G +WN ++++ N Q LEA E R+M+ V PD T+++ +
Sbjct: 252 LASSKVLLGSFGGRDLV--TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 255 LSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 312
+C+ L+ L GK +H Y ++ G ++ + +ALVD+Y V R++F+ + ++
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHG 371
++N M+ GY +N+ EA+ +F M + + + N ++ A +IHG
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
+V++ + N ++ Y++ G + A +F +M RDLV+W +MITGYV H ++
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 489
Query: 432 AIILFRLLQ-----------RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 480
A++L +Q R +L+ +S+TL+++L + + L L+ KE+H +
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 549
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
+++V ++L+ YAKCG L M+R +F Q+ ++ + +WN ++ AY MHGN E + L M
Sbjct: 550 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
+ +KP+E+TF S+ ACSHSG+V+EGL+IF M +Y + P HY C++DLL RAG+
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 601 LTEAYNLVKSMPSTHSSA-ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 659
+ EAY L+ MP + A A +LL A R++ + EIGE A+ +++LEP +S YVL++N
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 660 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
I + G WD+ +R K++ ++ PG S IE
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 145/293 (49%), Gaps = 5/293 (1%)
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY-ITR 381
++++L EA+ + +MI + + P+ F L+ AV+DL+D+ L + IH +V + Y +
Sbjct: 73 VRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS 132
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
V +AN +++ Y KCG VF+R+ R+ VSW S+I+ + A+ FR +
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 442 ENLRIDSVTLISLLQALSQLGCLSAV---KEVHCLTYRAFHGKELSVNNSLITTYAKCGK 498
EN+ S TL+S++ A S L + K+VH R + N+L+ Y K GK
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGK 251
Query: 499 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 558
L ++ L R L +WN +L + + E L+ M L ++PDE T +S+L A
Sbjct: 252 LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 311
Query: 559 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
CSH ++ G ++ ++ ++ + ++D+ Q+ + M
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 197/430 (45%), Gaps = 22/430 (5%)
Query: 197 MAAAVFGKMN---ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
+A+AV G + + S + W L+ + + + EA + MI + PD
Sbjct: 44 VASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVA-CTALVDLYSKF-DVTKARKMFERLRNKD 311
+ + A+L + GK IH ++ + G D V LV+LY K D K+F+R+ ++
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL---RDIRLARS 368
V +N +++ + A+ F M+ +V P+ +++++A S+L + + +
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ 223
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 428
+H Y LR + I N ++ Y K G L ++++ RDLV+W ++++ +
Sbjct: 224 VHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS-VNN 487
+ EA+ R + E + D T+ S+L A S L L KE+H + E S V +
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 488 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIK 546
+L+ Y C ++ R +F M +R + WNAM+ Y+ + + E L LF M + +
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 547 PDELTFTSILTACSHSGLVEE-----GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
+ T ++ AC SG G + R + R+ + N ++D+ SR G++
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV------QNTLMDMYSRLGKI 456
Query: 602 TEAYNLVKSM 611
A + M
Sbjct: 457 DIAMRIFGKM 466
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/644 (32%), Positives = 367/644 (56%), Gaps = 12/644 (1%)
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA 115
L G +VH IK ++ D + +SL+ +Y + G L DA +VFD + +DLVA+++++++
Sbjct: 117 LSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 116 YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG 175
+G V A R+ M D + P+ VT++S++ A+LG L+ R++HG R+ F
Sbjct: 177 CLENGE--VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD 234
Query: 176 VCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF 235
+ DE +LL MY KCG + + +F K+ + SW +I++Y + +A F
Sbjct: 235 L-DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAV--SWTAMISSYNRGEFSEKALRSF 291
Query: 236 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT-ALVDLYSK 294
+MI + P+L+TL + + SC + + GKS+HG+ +R ++P+ + + ALV+LY++
Sbjct: 292 SEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAE 351
Query: 295 F-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
++ + + +++ V +N +++ Y + ++A+ +F +M+ + P+ +
Sbjct: 352 CGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
ISA + + L + IHG+V+R ++ + N +I Y+K G + A VFN+++ R +
Sbjct: 412 ISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-C 472
V+W SM+ G+ +G+ EAI LF + L ++ VT ++++QA S +G L K VH
Sbjct: 471 VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK 530
Query: 473 LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE 532
L K+L + +LI YAKCG LN A +F+ M+ R + SW++M+ AY MHG
Sbjct: 531 LIISGL--KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGS 588
Query: 533 VLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCII 592
+ FN M KP+E+ F ++L+AC HSG VEEG F ++++ + + P H+ C I
Sbjct: 589 AISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFACFI 647
Query: 593 DLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSS 652
DLLSR+G L EAY +K MP ++ +L++ CR++ +I +AI + + ++
Sbjct: 648 DLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTG 707
Query: 653 SYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
Y L+SNI AE G W+E +R+ K LK PGYS IE+D++
Sbjct: 708 YYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQK 751
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 238/461 (51%), Gaps = 12/461 (2%)
Query: 12 LVASCRRRHYGEV---LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIK 68
LV+SC GEV LR + + + D + ++ C LG L + VH +
Sbjct: 173 LVSSCLEN--GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 230
Query: 69 LNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAF 128
+ D + +SL+ +YS+ G L + R+F++I K+ V++T++I++Y G A
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR--GEFSEKAL 288
Query: 129 RIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDM 188
R S M + PN VTL S+L + +G ++EG+++HG+A+RR E L+++
Sbjct: 289 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 348
Query: 189 YHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
Y +CG + V + + + +WN LI+ Y H G ++A LFRQM+ +++ PD
Sbjct: 349 YAECGKLSDCETVLRVV--SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAF 406
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL 307
TLA++I +C + GK IHG++IR V + V +L+D+YSK V A +F ++
Sbjct: 407 TLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQI 465
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
+++ V +N M+ G+ +N VEAI++F M + N FL +I A S + + +
Sbjct: 466 KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK 525
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
+H + L + + +I YAKCG L A VF M SR +VSW+SMI Y HG
Sbjct: 526 WVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHG 584
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK 468
I AI F + + + V +++L A G + K
Sbjct: 585 RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 189/358 (52%), Gaps = 8/358 (2%)
Query: 256 SCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
SC+ L + +H +++ G + D + T L++ Y+ +R +FE D+
Sbjct: 10 SCSSLRLVSQ---LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD-IRLARSIHGY 372
+Y V++ + L AI+++H ++ + + +F +++ A + R+ + + +HG
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 432
+++ I ++ Y + G L A VF+ M RDLV+W+++++ + +G + +A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 433 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 492
+ +F+ + + + D+VT+IS+++ ++LGCL + VH R + ++ NSL+T
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE-VLKLFNHMKLGNIKPDELT 551
Y+KCG L + +F+++ ++ SW AM+ +Y G ++E L+ F+ M I+P+ +T
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN-RGEFSEKALRSFSEMIKSGIEPNLVT 305
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 609
S+L++C GL+ EG + +R E +++L + G+L++ +++
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/671 (32%), Positives = 364/671 (54%), Gaps = 7/671 (1%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
Y +++ L S+ LK+C L + G +H +KL +S F+ ++L+ +Y++
Sbjct: 170 YWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAK 229
Query: 88 YGKLEDAHRVFDEITNK-DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTL 146
L A R+FD K D V + SI+++Y+ SG S + M PN T+
Sbjct: 230 NDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS--LETLELFREMHMTGPAPNSYTI 287
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
VS L A + G+ IH ++ + L+ MY +CG + A + +MN
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
+ V +WN LI Y+ N EA E F MI D +++ + I + L L G
Sbjct: 348 --NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKDAVIYNVMMTGYLKN 325
+H Y+I+ G + ++ L+D+YSK ++T + F R+ +KD + + ++ GY +N
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
D VEA+ +F ++ K + + + +++ A S L+ + + + IH ++LR + V I
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQ 524
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
N+++ Y KC + YA VF ++ +D+VSWTSMI+ +G+ EA+ LFR + L
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
DSV L+ +L A + L L+ +E+HC R E S+ +++ YA CG L A+ +
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644
Query: 506 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 565
F ++ + L + +M+ AY MHG ++LF+ M+ N+ PD ++F ++L ACSH+GL+
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 704
Query: 566 EEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLS 625
+EG + M EY + P HY C++D+L RA + EA+ VK M + ++ C LL+
Sbjct: 705 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 764
Query: 626 ACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKST 685
ACR + + EIGE A+++L+LEP+N + VL+SN+ AE GRW++V +RA K ++
Sbjct: 765 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 824
Query: 686 PGYSLIELDKQ 696
PG S IE+D +
Sbjct: 825 PGCSWIEMDGK 835
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/626 (26%), Positives = 307/626 (49%), Gaps = 17/626 (2%)
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
F+ L+ +Y + G L+DA +VFDE+ ++ A+ ++I AY +G A + M+
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPA--SALALYWNMR 174
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
+ + + +LL A AKL ++ G +H ++ G+ I L+ MY K +
Sbjct: 175 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIV-NALVSMYAKNDDL 233
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
A +F V WN ++++Y +G++LE ELFR+M P+ T+ +A+
Sbjct: 234 SAARRLFDGFQEKGDAV-LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALT 292
Query: 256 SCAELDYLCHGKSIHGYMIRMGV-EPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
+C Y GK IH +++ ++ C AL+ +Y++ + +A ++ ++ N D V
Sbjct: 293 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 352
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+N ++ GY++N + EA+ F +MI + ++I+A L ++ +H YV
Sbjct: 353 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 412
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
++H + + +++ N +I Y+KC Y F RM +DL+SWT++I GY + EA+
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 493
LFR + ++ + ID + L S+L+A S L + VKE+HC R + + N L+ Y
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK-GLLDTVIQNELVDVY 531
Query: 494 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
KC + A +F+ + + + SW +M+ + A++GN +E ++LF M + D +
Sbjct: 532 GKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Query: 554 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 613
IL+A + + +G +I ++R+ + G + ++D+ + G L A K++
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV-AVVDMYACCGDLQSA----KAVFD 646
Query: 614 THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSS----SYVLISNILAEGGRWDE 669
L S YG G+A + K+ N S S++ + + G DE
Sbjct: 647 RIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDE 706
Query: 670 -VAHIRAMTKDKELKSTPGYSLIELD 694
++ M + EL+ P + + +D
Sbjct: 707 GRGFLKIMEHEYELEPWPEHYVCLVD 732
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 206/418 (49%), Gaps = 11/418 (2%)
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
+L K ++ +GR +H + + L+ MY KCG + A VF +M
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM--P 143
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
T +WN +I AY+ NG+ A L+ M V L + + +CA+L + G
Sbjct: 144 DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK-DAVIYNVMMTGYLKND 326
+H ++++G ALV +Y+K D++ AR++F+ + K DAV++N +++ Y +
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 327 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ-YITRVEIA 385
+E + +F EM +PN ++ ++A +L + IH VL+ + + + +
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVC 323
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
N +I Y +CG + A + +M + D+V+W S+I GYV + EA+ F + +
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
D V++ S++ A +L L A E+H + L V N+LI Y+KC N+ Y+
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC---NLTCYM 440
Query: 506 ---FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 560
F +M ++ L SW ++ YA + + E L+LF + ++ DE+ SIL A S
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 167/346 (48%), Gaps = 7/346 (2%)
Query: 257 CAELDYLCHGKSIHGYMIRM--GVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
C + + G+ +H + + E D +A LV +Y K + A K+F+ + ++ A
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDFLA-GKLVFMYGKCGSLDDAEKVFDEMPDRTAF 148
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+N M+ Y+ N P A+ ++ M V ++ F L+ A + LRDIR +H +
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEA 432
++ Y + I N ++ YAK L AR +F+ + + D V W S+++ Y G E
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 433 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLIT 491
+ LFR + +S T++S L A KE+H + + H EL V N+LI
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328
Query: 492 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 551
Y +CGK+ A + +QM + +WN+++ Y + Y E L+ F+ M K DE++
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 597
TSI+ A + G+++ +I+ +V N +ID+ S+
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG-NTLIDMYSK 433
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 170/339 (50%), Gaps = 7/339 (2%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y E L + D+ + D ++T + + L L G +H IK +S+ VG++
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
LI +YS+ R F + +KDL+++T++I YA + C A + + +R+
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN--DCHVEALELFRDVAKKRME 484
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
+ + L S+L A++ L S+ + IH + +R+ G+ D + + L+D+Y KC + A
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRK--GLLDTVIQNELVDVYGKCRNMGYATR 542
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
VF + V SW +I++ NG EA ELFR+M+ + D + L + + A L
Sbjct: 543 VFESIKGKD--VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 319
L G+ IH Y++R G + A+VD+Y+ D+ A+ +F+R+ K + Y M+
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
Y + A+ +F +M +VSP+ FL L+ A S
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 5/277 (1%)
Query: 340 KMSVSPN---VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE-IANQIIHTYAKC 395
++ VS N V F ++ R + R +H + + ++ +A +++ Y KC
Sbjct: 70 RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129
Query: 396 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 455
G L A VF+ M R +W +MI YV +G A+ L+ ++ E + + + +LL
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 456 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC-L 514
+A ++L + + E+H L + + + N+L++ YAK L+ AR LF E+
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 515 TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 574
WN++L +Y+ G E L+LF M + P+ T S LTAC + G +I S
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 575 MIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+++ T N +I + +R G++ +A +++ M
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/676 (31%), Positives = 371/676 (54%), Gaps = 10/676 (1%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
+VL + + +K D LK+C +L RL FG +H + +SD ++ SSL+
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
LY+++G L A +VF+E+ +D+V +T++I Y+ +G V A + + M+ Q + P
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAG--IVGEACSLVNEMRFQGIKPG 146
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
VTL+ +L ++ LQ +H +A+ GF CD ++L++Y KC V A +F
Sbjct: 147 PVTLLEMLSGVLEITQLQ---CLHDFAVIYGFD-CDIAVMNSMLNLYCKCDHVGDAKDLF 202
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
+M SWN +I+ Y G E +L +M + PD T ++ +
Sbjct: 203 DQMEQRDMV--SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKAR-KMFERLRNKDAVIYNVMMTG 321
L G+ +H +++ G + DM TAL+ +Y K +A ++ E + NKD V + VM++G
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
++ +A+ VF EM++ + +++++ + L L S+HGYVLRH Y
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
N +I YAKCG+L + ++F RM RDLVSW ++I+GY + + +A++LF ++
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 442 ENLR-IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ ++ +DS T++SLLQA S G L K +HC+ R+F V+ +L+ Y+KCG L
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 501 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 560
A+ F ++ + + SW ++ Y HG L++++ ++P+ + F ++L++CS
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Query: 561 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
H+G+V++GL+IF SM+R++ + P H C++DLL RA ++ +A+ K + S L
Sbjct: 561 HNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVL 620
Query: 621 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 680
+L ACR G TE+ + I + +++L+P ++ YV + + A RWD+V+ +
Sbjct: 621 GIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSL 680
Query: 681 ELKSTPGYSLIELDKQ 696
LK PG+S IE++ +
Sbjct: 681 GLKKLPGWSKIEMNGK 696
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 189/390 (48%), Gaps = 9/390 (2%)
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
+G + F M+ K+LPD T + + +CA L L G SIH ++ G D
Sbjct: 24 HGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYI 83
Query: 285 CTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
++LV+LY+KF + ARK+FE +R +D V + M+ Y + + EA ++ +EM +
Sbjct: 84 SSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGI 143
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
P L ++S V ++ + + +H + + + + + + N +++ Y KC ++ A+
Sbjct: 144 KPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 404 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 463
+F++M RD+VSW +MI+GY G++ E + L ++ + LR D T + L +
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
L + +HC + ++ + +LIT Y KCGK + + + + + + W M+
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE-YTI- 581
G + L +F+ M S++ +C+ G + G + ++R YT+
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 582 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
P N +I + ++ G L ++ + + M
Sbjct: 381 TPA---LNSLITMYAKCGHLDKSLVIFERM 407
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/664 (31%), Positives = 351/664 (52%), Gaps = 9/664 (1%)
Query: 33 NSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN-LNSDCFVGSSLIRLYSEYGKL 91
+ K+ +D + L+ C L+ GK V + I+ N D +GS L +Y+ G L
Sbjct: 87 SGKWDIDPRTLCSVLQLCADSKSLKDGKEVD-NFIRGNGFVIDSNLGSKLSLMYTNCGDL 145
Query: 92 EDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLH 151
++A RVFDE+ + + + ++ A SG G+ + M + + T +
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGD--FSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 152 AAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
+ + L S+ G +HG+ ++ GFG + + +L+ Y K V A VF +M T
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEM--TERD 260
Query: 212 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
V SWN +I Y+ NG A + +F QM+ + DL T+ + CA+ + G+++H
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 272 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 330
++ + C L+D+YSK D+ A+ +F + ++ V Y M+ GY + L E
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 331 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
A+ +F EM + +SP+V +++ + R + + +H ++ + + ++N ++
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 391 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSV 449
YAKCG +Q A LVF+ MR +D++SW ++I GY + + +EA+ LF LL E D
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 450 TLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 509
T+ +L A + L +E+H R + + V NSL+ YAKCG L +A LF +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 510 TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGL 569
+ L SW M+ Y MHG E + LFN M+ I+ DE++F S+L ACSHSGLV+EG
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 570 QIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRL 629
+ F M E I P HY CI+D+L+R G L +AY +++MP + LL CR+
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 630 YGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 689
+ D ++ E +A+++ +LEP N+ YVL++NI AE +W++V +R + L+ PG S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 690 LIEL 693
IE+
Sbjct: 741 WIEI 744
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 229/437 (52%), Gaps = 7/437 (1%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
+ + +S +D + KS +L + G+++H +K VG+SL+ Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
+++ A +VFDE+T +D++++ SII Y +G + M + + T+V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNG--LAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
S+ A + GRA+H ++ F D F TLLDMY KCG + A AVF +M
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDR-FCNTLLDMYSKCGDLDSAKAVFREM-- 357
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
+ +V S+ +IA Y G A EA +LF +M + PD+ T+ + CA L GK
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 326
+H ++ + D+ AL+D+Y+K + +A +F +R KD + +N ++ GY KN
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 327 LPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
EA+++F+ +++ SP+ ++ A + L R IHGY++R+ Y + +A
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
N ++ YAKCG L A ++F+ + S+DLVSWT MI GY HG EAI LF +++ +
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 446 IDSVTLISLLQALSQLG 462
D ++ +SLL A S G
Sbjct: 598 ADEISFVSLLYACSHSG 614
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 11/320 (3%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S T + R GE ++ + +++ S D +T L C L+ GKRVH +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH-EW 422
Query: 67 IKLN-LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCV 124
IK N L D FV ++L+ +Y++ G +++A VF E+ KD++++ +II Y+ + +
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 125 YGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT 184
F + ++++R P+ T+ +L A A L + +GR IHGY +R G+ D +
Sbjct: 483 LSLFNL--LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDRHVANS 539
Query: 185 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL 244
L+DMY KCG + +A +F + S + SW +IA Y +G EA LF QM +
Sbjct: 540 LVDMYAKCGALLLAHMLFDDI--ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 245 PDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKF-DVTKARK 302
D ++ + + +C+ + G M +EP + +VD+ ++ D+ KA +
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657
Query: 303 MFERLR-NKDAVIYNVMMTG 321
E + DA I+ ++ G
Sbjct: 658 FIENMPIPPDATIWGALLCG 677
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/655 (30%), Positives = 354/655 (54%), Gaps = 10/655 (1%)
Query: 42 AITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEI 101
A + L +C + LE G+++H +KL +SD +V ++L+ LY G L A +F +
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 102 TNKDLVAYTSIITAYAHSGGSCVYG--AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSL 159
+ +D V Y ++I + C YG A + M L P+ TL SL+ A + G+L
Sbjct: 350 SQRDAVTYNTLINGLSQ----CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 160 QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI 219
G+ +H Y + GF ++I E LL++Y KC ++ A F + + + WN ++
Sbjct: 406 FRGQQLHAYTTKLGFASNNKI-EGALLNLYAKCADIETALDYFLETEVENVVL--WNVML 462
Query: 220 AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE 279
AY +F +FRQM +++P+ T + + +C L L G+ IH +I+ +
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 280 PDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 338
+ C+ L+D+Y+K + A + R KD V + M+ GY + + +A+ F +M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 339 IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL 398
+ + + N +SA + L+ ++ + IH + + + N ++ Y++CG +
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 399 QYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQAL 458
+ + L F + + D ++W ++++G+ G+ +EA+ +F + RE + ++ T S ++A
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 459 SQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWN 518
S+ + K+VH + + + E V N+LI+ YAKCG ++ A F +++ + SWN
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 519 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 578
A++ AY+ HG +E L F+ M N++P+ +T +L+ACSH GLV++G+ F SM E
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 579 YTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEA 638
Y + P HY C++D+L+RAG L+ A ++ MP + TLLSAC ++ + EIGE
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 882
Query: 639 IAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
A +L+LEP +S++YVL+SN+ A +WD R K+K +K PG S IE+
Sbjct: 883 AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 234/482 (48%), Gaps = 13/482 (2%)
Query: 133 TMQDQRLYPNRVTLVSLLHAAAKL-GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
+++++ + PN TL LL K GSL EGR +H ++ G + L D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLD-SNGCLSEKLFDFYLF 132
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
G + A VF +M T+ +WN +I E F LF +M+ V P+ T +
Sbjct: 133 KGDLYGAFKVFDEM--PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 252 NAILSC----AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFER 306
+ +C D + + IH ++ G+ V C L+DLYS+ V AR++F+
Sbjct: 191 GVLEACRGGSVAFDVV---EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 307 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 366
LR KD + M++G KN+ EAI +F +M + + P F +++SA + + +
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 367 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
+HG VL+ + + + N ++ Y G L A +F+ M RD V++ ++I G
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 486
G+ ++A+ LF+ + + L DS TL SL+ A S G L +++H T + +
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
+L+ YAKC + A F + + WN ML AY + + ++F M++ I
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
P++ T+ SIL C G +E G QI +I+ + V + +ID+ ++ G+L A++
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV-CSVLIDMYAKLGKLDTAWD 546
Query: 607 LV 608
++
Sbjct: 547 IL 548
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/598 (24%), Positives = 272/598 (45%), Gaps = 26/598 (4%)
Query: 46 CLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD 105
CLK+ G L+ G+++H +KL L+S+ + L Y G L A +VFDE+ +
Sbjct: 94 CLKTN---GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 150
Query: 106 LVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG--R 163
+ + +I A + + F + M + + PN T +L A + GS+
Sbjct: 151 IFTWNKMIKELASR--NLIGEVFGLFVRMVSENVTPNEGTFSGVLE-ACRGGSVAFDVVE 207
Query: 164 AIHGYAIRRGFG----VCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI 219
IH + +G VC+ L+D+Y + G V +A VF + + SW +I
Sbjct: 208 QIHARILYQGLRDSTVVCN-----PLIDLYSRNGFVDLARRVFDGLRLKDHS--SWVAMI 260
Query: 220 AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE 279
+ N EA LF M ++P ++ + +C +++ L G+ +HG ++++G
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 280 PDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 338
D C ALV LY ++ A +F + +DAV YN ++ G + +A+ +F M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 339 IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL 398
+ P+ +L+ A S + + +H Y + + + +I +++ YAKC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 399 QYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQAL 458
+ A F ++V W M+ Y + + +FR +Q E + + T S+L+
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 459 SQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWN 518
+LG L +++H + V + LI YAK GKL+ A + + + + SW
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 519 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF-RSMIR 577
M+ Y + + L F M I+ DE+ T+ ++AC+ ++EG QI ++ +
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 578 EYTI-VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE 634
++ +P + N ++ L SR G++ E+Y L + A L+S + G+ E
Sbjct: 621 GFSSDLPFQ---NALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNE 674
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/653 (31%), Positives = 347/653 (53%), Gaps = 9/653 (1%)
Query: 45 LCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK 104
L L+ C +L L +++ K L + F + L+ L+ YG +++A RVF+ I +K
Sbjct: 42 LLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 105 DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
V Y +++ +A S + A + M+ + P LL L+ G+
Sbjct: 99 LNVLYHTMLKGFAKV--SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 224
IHG ++ GF + D T L +MY KC V A VF +M SWN ++A Y
Sbjct: 157 IHGLLVKSGFSL-DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV--SWNTIVAGYSQ 213
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
NG A A E+ + M + P +T+ + + + + L + GK IHGY +R G + +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 285 CTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
TALVD+Y+K + AR++F+ + ++ V +N M+ Y++N+ P EA+ +F +M+ V
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
P + + A +DL D+ R IH + V + N +I Y KC + A
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 404 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 463
+F +++SR LVSW +MI G+ +G +A+ F ++ ++ D+ T +S++ A+++L
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
K +H + R+ K + V +L+ YAKCG + +AR +F M+ER +T+WNAM+
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
Y HG L+LF M+ G IKP+ +TF S+++ACSHSGLVE GL+ F M Y+I
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Query: 584 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 643
HY ++DLL RAG+L EA++ + MP + +L AC+++ + E A+++
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 644 LKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+L P + +VL++NI W++V +R + L+ TPG S++E+ +
Sbjct: 634 FELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNE 686
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 293/542 (54%), Gaps = 15/542 (2%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT 102
T LK C L GK +H +K + D F + L +Y++ ++ +A +VFD +
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 103 NKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
+DLV++ +I+ Y+ +G + + A + +M ++ L P+ +T+VS+L A + L + G
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARM--ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 222
+ IHGYA+R GF I T L+DMY KCG ++ A +F M V SWN +I AY
Sbjct: 256 KEIHGYAMRSGFDSLVNI-STALVDMYAKCGSLETARQLFDGM--LERNVVSWNSMIDAY 312
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 282
+ N EA +F++M+ V P +++ A+ +CA+L L G+ IH + +G++ ++
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 283 VACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
+L+ +Y K +V A MF +L+++ V +N M+ G+ +N P++A+N F +M
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
+V P+ ++++I+A+++L A+ IHG V+R V + ++ YAKCG + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 402 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 461
RL+F+ M R + +W +MI GY HG A+ LF +Q+ ++ + VT +S++ A S
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 462 GCLSAVKEVHCL-TYRAFHGKELSVNN--SLITTYAKCGKLNMA-RYLFQQMTERCLTSW 517
G + A + C + + ELS+++ +++ + G+LN A ++ Q + + +
Sbjct: 553 GLVEA--GLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGL-QIFRSMI 576
AMLGA +H N K +L + PD+ + +L + + E + Q+ SM+
Sbjct: 611 GAMLGACQIHKNVNFAEKAAE--RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 577 RE 578
R+
Sbjct: 669 RQ 670
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/676 (30%), Positives = 369/676 (54%), Gaps = 10/676 (1%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
+ +++ S S + L + + L+ G VH ++IKL L S+ +VGSSL+ +YS+
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
K+E A +VF+ + K+ V + ++I YAH+G S + + M+ + T
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES--HKVMELFMDMKSSGYNIDDFTFT 432
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
SLL A L+ G H I++ + L+DMY KCG ++ A +F +M
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
+WN +I +Y+ + EAF+LF++M ++ D LA+ + +C + L GK
Sbjct: 492 RDNV--TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKND 326
+H ++ G++ D+ ++L+D+YSK + K ARK+F L V N ++ GY +N+
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 327 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE-IA 385
L EA+ +F EM+ V+P+ F ++ A + L HG + + + + E +
Sbjct: 610 LE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
++ Y + A +F+ + S + +V WT M++G+ +G +EA+ ++ ++ + +
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 504
D T +++L+ S L L + +H L + H + +N+LI YAKCG + +
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 505 LFQQMTERC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
+F +M R + SWN+++ YA +G + LK+F+ M+ +I PDE+TF +LTACSH+G
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
V +G +IF MI +Y I H C++DLL R G L EA + +++ + +L
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
L ACR++GD GE A+++++LEP+NSS+YVL+SNI A G W++ +R + +D+ +K
Sbjct: 909 LGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Query: 684 STPGYSLIELDKQREV 699
PGYS I+++++ +
Sbjct: 969 KVPGYSWIDVEQRTHI 984
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/606 (25%), Positives = 284/606 (46%), Gaps = 42/606 (6%)
Query: 22 GEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSL 81
G+VLR ++ L ++ + ++ L +C +EFG+++H IK+ L + + G +L
Sbjct: 142 GKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGAL 201
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYP 141
+ +Y++ ++ DA RVF+ I + + V +T + + Y +G A + M+D+ P
Sbjct: 202 VDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG--LPEEAVLVFERMRDEGHRP 259
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
+ + V++++ +LG L++ R +
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLL------------------------------------ 283
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
FG+M +S V +WN +I+ + G A E F M V TL + + + +
Sbjct: 284 FGEM--SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMT 320
L G +H I++G+ ++ ++LV +YSK + + A K+FE L K+ V +N M+
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
GY N + + +F +M + + F +L+S + D+ + H +++ +
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 440
+ + N ++ YAKCG L+ AR +F RM RD V+W ++I YV + EA LF+ +
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMN 521
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ D L S L+A + + L K+VHCL+ + ++L +SLI Y+KCG +
Sbjct: 522 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 501 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 560
AR +F + E + S NA++ Y+ + N E + LF M + P E+TF +I+ AC
Sbjct: 582 DARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 561 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
+ G Q + + GE ++ + + +TEA L + S S
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 621 CTLLSA 626
++S
Sbjct: 701 TGMMSG 706
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 163/579 (28%), Positives = 290/579 (50%), Gaps = 25/579 (4%)
Query: 20 HYGE---VLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
H GE V+ ++D+K+S +++D T L +C A LE G + H IK L + F
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
VG++L+ +Y++ G LEDA ++F+ + ++D V + +II +Y AF + M
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES--EAFDLFKRMNL 522
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFET--TLLDMYHKCGG 194
+ + L S L A + L +G+ +H +++ G D T +L+DMY KCG
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL---DRDLHTGSSLIDMYSKCGI 579
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
+K A VF + S V S N LIA Y N EA LF++M+ R V P +T A +
Sbjct: 580 IKDARKVFSSLPEWS--VVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIV 636
Query: 255 LSCAELDYLCHGKSIHGYMIRMGV--EPDMVACTALVDLYSKFDVTKARKMFERLRN-KD 311
+C + + L G HG + + G E + + + L + +T+A +F L + K
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
V++ MM+G+ +N EA+ + EM V P+ A F+ ++ S L +R R+IH
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHID 430
+ + +N +I YAKCG ++ + VF+ MR R ++VSW S+I GY +G+ +
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--S 488
+A+ +F +++ ++ D +T + +L A S G +S +++ + + G E V++
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY-GIEARVDHVAC 875
Query: 489 LITTYAKCGKLNMA-RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
++ + G L A ++ Q + W+++LGA +HG+ ++ + KL ++P
Sbjct: 876 MVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD--DIRGEISAEKLIELEP 933
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTI--VPG 584
+ +L+ S E R ++R+ + VPG
Sbjct: 934 QNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 257/558 (46%), Gaps = 43/558 (7%)
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA 115
L GK VH S+ L ++S+ +G++++ LY++ ++ A + FD KD+ A+ S+++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSM 134
Query: 116 YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG 175
Y+ G R ++ + +++PN+ T +L A+ +++ GR IH I+ G
Sbjct: 135 YSSIGKPG--KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 176 VCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF 235
+ L+DMY KC + A VF + +T W L + Y+ G EA +F
Sbjct: 193 R-NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC--WTCLFSGYVKAGLPEEAVLVF 249
Query: 236 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF 295
+M PD L I IR+G D
Sbjct: 250 ERMRDEGHRPDHLAFVTVI----------------NTYIRLGKLKD-------------- 279
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
AR +F + + D V +NVM++G+ K AI F M K SV + +++S
Sbjct: 280 ----ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
A+ + ++ L +H ++ + + + + ++ Y+KC ++ A VF + ++ V
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
W +MI GY H+G + + LF ++ ID T SLL + L + H +
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 535
+ K L V N+L+ YAKCG L AR +F++M +R +WN ++G+Y N +E
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY-NCIIDL 594
LF M L I D S L AC+H + +G Q+ ++ + ++H + +ID+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK--CGLDRDLHTGSSLIDM 573
Query: 595 LSRAGQLTEAYNLVKSMP 612
S+ G + +A + S+P
Sbjct: 574 YSKCGIIKDARKVFSSLP 591
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 263/536 (49%), Gaps = 12/536 (2%)
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
++I Y GKL+DA +F E+++ D+VA+ +I+ + G C A M+ +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG--CETVAIEYFFNMRKSSV 323
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMA 198
R TL S+L A + +L G +H AI+ G+ I+ ++L+ MY KC ++ A
Sbjct: 324 KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK--LGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
A VF + + WN +I Y HNG++ + ELF M D T + + +CA
Sbjct: 382 AKVFEALEEKNDVF--WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNV 317
L G H +I+ + ++ ALVD+Y+K + AR++FER+ ++D V +N
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
++ Y++++ EA ++F M + + A + + A + + + + +H ++
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
+ + +I Y+KCG ++ AR VF+ + +VS ++I GY + +++EA++LF+
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQ 618
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNSLITTYAKC 496
+ + +T ++++A + L+ + H +T R F + + SL+ Y
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 497 GKLNMARYLFQQMTE-RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 555
+ A LF +++ + + W M+ ++ +G Y E LK + M+ + PD+ TF ++
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
L CS + EG I S+I E+ N +ID+ ++ G + + + M
Sbjct: 739 LRVCSVLSSLREGRAI-HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 220/455 (48%), Gaps = 41/455 (9%)
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNP 217
+L+ G+A+H ++ G + ++D+Y KC V A F + V +WN
Sbjct: 75 ALRIGKAVHSKSLILGID-SEGRLGNAIVDLYAKCAQVSYAEKQF---DFLEKDVTAWNS 130
Query: 218 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 277
+++ Y G+ + F + ++ P+ T + + +CA + G+ IH MI+MG
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 278 VEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 336
+E + ALVD+Y+K D ++ AR++FE + + + V + + +GY+K LP EA+ VF
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 337 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 396
M P+ F+ +I+TY + G
Sbjct: 251 RMRDEGHRPDHLAFVT-----------------------------------VINTYIRLG 275
Query: 397 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 456
L+ ARL+F M S D+V+W MI+G+ G AI F +++ +++ TL S+L
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 457 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS 516
A+ + L VH + + V +SL++ Y+KC K+ A +F+ + E+
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 576
WNAM+ YA +G +V++LF MK D+ TFTS+L+ C+ S +E G Q F S+I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSII 454
Query: 577 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+ + N ++D+ ++ G L +A + + M
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 131/289 (45%), Gaps = 13/289 (4%)
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 422
+R+ +++H L + + N I+ YAKC + YA F+ + +D+ +W SM++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 423 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 482
Y G + + F L + + T +L ++ + +++HC + +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
+L+ YAKC +++ AR +F+ + + W + Y G E + +F M+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 602
+PD L F +++ G +++ +F M P V +N +I + G T
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCET 309
Query: 603 EA----YNLVK-SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL 646
A +N+ K S+ ST S+ L ++LSA + + ++G + + +KL
Sbjct: 310 VAIEYFFNMRKSSVKSTRST--LGSVLSAIGIVANLDLGLVVHAEAIKL 356
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 9 TGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIK 68
TG + + Y E L+ Y ++++ D + L+ C L L G+ +H
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 69 LNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK-DLVAYTSIITAYAHSGGSCVYGA 127
L + D ++LI +Y++ G ++ + +VFDE+ + ++V++ S+I YA +G + A
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYA--EDA 818
Query: 128 FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
+I +M+ + P+ +T + +L A + G + +GR I
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/677 (30%), Positives = 360/677 (53%), Gaps = 12/677 (1%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E R +L++ +DCS + LK L FG+++H IK D VG+SL+
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLV 135
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
Y + +D +VFDE+ +++V +T++I+ YA + S + MQ++ PN
Sbjct: 136 DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN--SMNDEVLTLFMRMQNEGTQPN 193
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
T + L A+ G G +H ++ G + +L+++Y KCG V+ A +F
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV-SNSLINLYLKCGNVRKARILF 252
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
K S V +WN +I+ Y NG LEA +F M V + A+ I CA L
Sbjct: 253 DKTEVKS--VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI-YNVMMT 320
L + +H +++ G D TAL+ YSK + A ++F+ + V+ + M++
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
G+L+ND EA+++F EM + V PN + +++A+ + +H V++ Y
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYER 426
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 440
+ ++ Y K G ++ A VF+ + +D+V+W++M+ GY G + AI +F L
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 441 RENLRIDSVTLISLLQALSQLGC-LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 499
+ ++ + T S+L + + K+ H ++ L V+++L+T YAK G +
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 500 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
A +F++ E+ L SWN+M+ YA HG + L +F MK +K D +TF + AC
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
+H+GLVEEG + F M+R+ I P + H +C++DL SRAGQL +A ++++MP+ S
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 620 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 679
T+L+ACR++ TE+G A++I+ ++P +S++YVL+SN+ AE G W E A +R + +
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 680 KELKSTPGYSLIELDKQ 696
+ +K PGYS IE+ +
Sbjct: 727 RNVKKEPGYSWIEVKNK 743
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 248/498 (49%), Gaps = 38/498 (7%)
Query: 75 CFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
CF S RLY +AH +FD+ +D +Y S++ ++ G T
Sbjct: 34 CFGTVSSSRLY-------NAHNLFDKSPGRDRESYISLLFGFSRDG-----------RTQ 75
Query: 135 QDQRLYPN--RVTL-------VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETT 184
+ +RL+ N R+ + S+L +A L GR +H I+ FG D++ T+
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIK--FGFLDDVSVGTS 133
Query: 185 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL 244
L+D Y K K VF +M V +W LI+ Y N E LF +M +
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMK--ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 245 PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKM 303
P+ T A A+ AE G +H +++ G++ + +L++LY K +V KAR +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
F++ K V +N M++GY N L +EA+ +F+ M V + + F ++I ++L+++
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITG 422
R +H V+++ ++ I ++ Y+KC + A +F + ++VSWT+MI+G
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 423 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 482
++ + +EA+ LF ++R+ +R + T +L AL + + EVH + + +
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERS 427
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
+V +L+ Y K GK+ A +F + ++ + +W+AML YA G +K+F +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 543 GNIKPDELTFTSILTACS 560
G IKP+E TF+SIL C+
Sbjct: 488 GGIKPNEFTFSSILNVCA 505
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 138/262 (52%)
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
A +F++ +D Y ++ G+ ++ EA +F + ++ + + ++F +++ +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
L D R +H ++ ++ V + ++ TY K + R VF+ M+ R++V+WT++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 420 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 479
I+GY + DE + LF +Q E + +S T + L L++ G +VH + +
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
K + V+NSLI Y KCG + AR LF + + + +WN+M+ YA +G E L +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 540 MKLGNIKPDELTFTSILTACSH 561
M+L ++ E +F S++ C++
Sbjct: 286 MRLNYVRLSESSFASVIKLCAN 307
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/680 (31%), Positives = 362/680 (53%), Gaps = 7/680 (1%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+ E L Y L+ SK S D +K+C L E G V+ + + SD FVG++
Sbjct: 87 FPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNA 146
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
L+ +YS G L A +VFDE+ +DLV++ S+I+ Y+ G A I +++ +
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG--YYEEALEIYHELKNSWIV 204
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ T+ S+L A L +++G+ +HG+A++ G + L+ MY K A
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS-VVVVNNGLVAMYLKFRRPTDARR 263
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
VF +M+ + S+N +I YL E+ +F + + + PDLLT+++ + +C L
Sbjct: 264 VFDEMDVRDSV--SYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHL 320
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 319
L K I+ YM++ G + L+D+Y+K D+ AR +F + KD V +N ++
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 379
+GY+++ +EA+ +F M+ M + +L LIS + L D++ + +H ++
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC 440
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 439
+ ++N +I YAKCG + + +F+ M + D V+W ++I+ V G + + +
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 499
++ + D T + L + L KE+HC R + EL + N+LI Y+KCG L
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 500 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
+ +F++M+ R + +W M+ AY M+G + L+ F M+ I PD + F +I+ AC
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
SHSGLV+EGL F M Y I P HY C++DLLSR+ ++++A +++MP ++
Sbjct: 621 SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASI 680
Query: 620 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 679
++L ACR GD E E ++++I++L P + +L SN A +WD+V+ IR KD
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 680 KELKSTPGYSLIELDKQREV 699
K + PGYS IE+ K V
Sbjct: 741 KHITKNPGYSWIEVGKNVHV 760
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 296/580 (51%), Gaps = 16/580 (2%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITN-KDLVAYTSIITAYAH 118
+R+H I L L+S F LI YS + + + VF ++ K++ + SII A++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
+G A +++ ++ P++ T S++ A A L + G ++ + GF D
Sbjct: 84 NG--LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE-SD 140
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
L+DMY + G + A VF +M SWN LI+ Y +G EA E++ ++
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV--SWNSLISGYSSHGYYEEALEIYHEL 198
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DV 297
+ ++PD T+++ + + L + G+ +HG+ ++ GV +V LV +Y KF
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 298 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
T AR++F+ + +D+V YN M+ GYLK ++ E++ +F E + P++ +++ A
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRAC 317
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
LRD+ LA+ I+ Y+L+ ++ + N +I YAKCG + AR VFN M +D VSW
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
S+I+GY+ G + EA+ LF+++ + D +T + L+ ++L L K +H ++
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 537
+LSV+N+LI YAKCG++ + +F M +WN ++ A G++A L++
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 538 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR---EYTIVPGEVHYNCIIDL 594
M+ + PD TF L C+ G +I ++R E + G N +I++
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG----NALIEM 553
Query: 595 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE 634
S+ G L + + + M S ++ A +YG+ E
Sbjct: 554 YSKCGCLENSSRVFERM-SRRDVVTWTGMIYAYGMYGEGE 592
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 255/507 (50%), Gaps = 6/507 (1%)
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
RV+ + A + +L E R IH I G D F L+D Y + +V
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSD-FFSGKLIDKYSHFREPASSLSV 61
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F ++ + + V WN +I A+ NG EA E + ++ KV PD T + I +CA L
Sbjct: 62 FRRV-SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMT 320
G ++ ++ MG E D+ ALVD+YS+ +T+AR++F+ + +D V +N +++
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
GY + EA+ ++HE+ + P+ +++ A +L ++ + +HG+ L+ +
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 440
V + N ++ Y K AR VF+ M RD VS+ +MI GY+ ++E++ +F L
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LEN 299
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ + D +T+ S+L+A L LS K ++ +A E +V N LI YAKCG +
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 501 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 560
AR +F M + SWN+++ Y G+ E +KLF M + + D +T+ +++ +
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 561 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
++ G + + I+ + V N +ID+ ++ G++ ++ + SM T +
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVS-NALIDMYAKCGEVGDSLKIFSSM-GTGDTVTW 477
Query: 621 CTLLSACRLYGDTEIGEAIAKQILKLE 647
T++SAC +GD G + Q+ K E
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSE 504
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/573 (28%), Positives = 268/573 (46%), Gaps = 54/573 (9%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
+Y E L Y +LKNS D ++ L + L ++ G+ +H ++K +NS V +
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
L+ +Y ++ + DA RVFDE+ +D V+Y ++I Y V + R+ DQ
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL--EMVEESVRMFLENLDQ-F 303
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 199
P+ +T+ S+L A L L + I+ Y ++ GF V + L+D+Y KCG + A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF-VLESTVRNILIDVYAKCGDMITAR 362
Query: 200 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
VF M T SWN +I+ Y+ +G +EA +LF+ M+ + D +T I
Sbjct: 363 DVFNSMECKDTV--SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 318
L L GK +H I+ G+ D+ AL+D+Y+K +V + K+F + D V +N +
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTV 480
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
++ ++ + V +M K V P++A FL + + L RL + IH +LR Y
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 438
+ ++I N +I Y+KCG L+ + VF RM RD+V+WT MI Y +G ++A+ F
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 439 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA---- 494
+++ + DSV I+++ A S G + + + C H K + +I YA
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVD--EGLACFEKMKTHYK----IDPMIEHYACVVD 654
Query: 495 ---KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 551
+ K++ A Q M IKPD
Sbjct: 655 LLSRSQKISKAEEFIQAMP----------------------------------IKPDASI 680
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPG 584
+ S+L AC SG +E ++ R +I PG
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 361 bits (926), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 326/625 (52%), Gaps = 10/625 (1%)
Query: 71 LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRI 130
L D + + L+ LY +G +DA VFD+I D + ++ Y + S ++
Sbjct: 72 LMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESV--EVVKL 129
Query: 131 ASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYH 190
+ + + L A +L L G+ IH ++ D + T LLDMY
Sbjct: 130 YDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK--VPSFDNVVLTGLLDMYA 187
Query: 191 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 250
KCG +K A VF + T V W +IA Y+ N E LF +M VL + T
Sbjct: 188 KCGEIKSAHKVFNDI--TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245
Query: 251 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRN 309
I++C +L L GK HG +++ G+E T+L+D+Y K D++ AR++F +
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 305
Query: 310 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 369
D V++ M+ GY N EA+++F +M + + PN +++S + ++ L RS+
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 370 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 429
HG ++ I +AN ++H YAKC + A+ VF +D+V+W S+I+G+ +G I
Sbjct: 366 HGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA--FHGKELSVNN 487
EA+ LF + E++ + VT+ SL A + LG L+ +H + + + V
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 488 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
+L+ YAKCG AR +F + E+ +W+AM+G Y G+ L+LF M KP
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 607
+E TFTSIL+AC H+G+V EG + F SM ++Y P HY C++D+L+RAG+L +A ++
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 604
Query: 608 VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRW 667
++ MP L C ++ ++GE + K++L L P ++S YVL+SN+ A GRW
Sbjct: 605 IEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRW 664
Query: 668 DEVAHIRAMTKDKELKSTPGYSLIE 692
++ +R + K + L G+S +E
Sbjct: 665 NQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 285/544 (52%), Gaps = 18/544 (3%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C + EV++ Y L F D + LK+C L L+ GK++H +K+ + D
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDN 176
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
V + L+ +Y++ G+++ AH+VF++IT +++V +TS+I Y + C G + + M+
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN-DLCEEG-LVLFNRMR 234
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
+ + N T +L+ A KL +L +G+ HG ++ G + T+LLDMY KCG +
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIEL-SSCLVTSLLDMYVKCGDI 293
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
A VF + + + W +I Y HNG EA LF++M ++ P+ +T+A+ +
Sbjct: 294 SNARRVFNEHSHVDLVM--WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLS 351
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVI 314
C ++ L G+S+HG I++G+ VA ALV +Y+K + A+ +FE KD V
Sbjct: 352 GCGLIENLELGRSVHGLSIKVGIWDTNVA-NALVHMYAKCYQNRDAKYVFEMESEKDIVA 410
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
+N +++G+ +N EA+ +FH M SV+PN +L SA + L + + S+H Y +
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 375 RHQYI--TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 432
+ ++ + V + ++ YAKCG Q ARL+F+ + ++ ++W++MI GY G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 433 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN-NSLIT 491
+ LF + ++ + + T S+L A G ++ K+ Y+ ++ + + ++
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 590
Query: 492 TYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNY--AEVLKLFNHMKLGNIKPD 548
A+ G+L A + ++M + + + A L MH + E++ K+ ++ PD
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI----KKMLDLHPD 646
Query: 549 ELTF 552
+ ++
Sbjct: 647 DASY 650
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/683 (30%), Positives = 366/683 (53%), Gaps = 13/683 (1%)
Query: 12 LVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNL 71
+ + R ++YG V + ++ D + L +C +L +L FGK V IK
Sbjct: 223 IAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA 282
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
D FV ++++ LY++ G + +A VF I N +V++T +++ Y S + + A I
Sbjct: 283 E-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA--FSALEIF 339
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
M+ + N T+ S++ A + + E +H + + GF + D L+ MY K
Sbjct: 340 KEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL-DSSVAAALISMYSK 398
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
G + ++ VF ++ N +I ++ + + +A LF +M+ + D ++
Sbjct: 399 SGDIDLSEQVFEDLDDIQRQ-NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 252 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 310
+ + + LD L GK +HGY ++ G+ D+ ++L LYSK + ++ K+F+ + K
Sbjct: 458 SLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
D + M++G+ + EAI +F EM+ SP+ + +++ S + + IH
Sbjct: 515 DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIH 574
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
GY LR +++ + +++ Y+KCG L+ AR V++R+ D VS +S+I+GY HG I
Sbjct: 575 GYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQ 634
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQA--LSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 488
+ +LFR + +DS + S+L+A LS L A +VH + E SV +S
Sbjct: 635 DGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGA--QVHAYITKIGLCTEPSVGSS 692
Query: 489 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 548
L+T Y+K G ++ F Q+ L +W A++ +YA HG E L+++N MK KPD
Sbjct: 693 LLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPD 752
Query: 549 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 608
++TF +L+ACSH GLVEE SM+++Y I P HY C++D L R+G+L EA + +
Sbjct: 753 KVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFI 812
Query: 609 KSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWD 668
+M + TLL+AC+++G+ E+G+ AK+ ++LEP ++ +Y+ +SNILAE G WD
Sbjct: 813 NNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWD 872
Query: 669 EVAHIRAMTKDKELKSTPGYSLI 691
EV R + K ++ PG+S +
Sbjct: 873 EVEETRKLMKGTGVQKEPGWSSV 895
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 179/704 (25%), Positives = 326/704 (46%), Gaps = 54/704 (7%)
Query: 8 ITGNLVASCRRRH--YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVD 65
++ N++ S ++H + E LR + + F + + + +C AL F + V
Sbjct: 116 VSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCH 175
Query: 66 SIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVY 125
+IK+ V S+LI ++S+ + EDA++VF + + ++ + +II + Y
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN---Y 232
Query: 126 GA-FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-T 183
GA F + M P+ T S+L A A L L+ G+ + I+ G +++F T
Sbjct: 233 GAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG---AEDVFVCT 289
Query: 184 TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
++D+Y KCG + A VF ++ + +V SW +++ Y + A A E+F++M H V
Sbjct: 290 AIVDLYAKCGHMAEAMEVFSRI--PNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGV 347
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARK 302
+ T+ + I +C +C +H ++ + G D AL+ +YSK D+ + +
Sbjct: 348 EINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQ 407
Query: 303 MFERLRN-KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 361
+FE L + + I NVM+T + ++ P +AI +F M++ + + ++ S +S L
Sbjct: 408 VFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDE---FSVCSLLSVLD 464
Query: 362 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 421
+ L + +HGY L+ + + + + + Y+KCG L+ + +F + +D W SMI+
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMIS 524
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
G+ +G++ EAI LF + + D TL ++L S L KE+H T RA K
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
+ + ++L+ Y+KCG L +AR ++ ++ E S ++++ Y+ HG + LF M
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIF---------------RSMIREYTIV---- 582
+ D +SIL A + S G Q+ S++ Y+
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 583 -----------PGEVHYNCIIDLLSRAGQLTEA---YNLVKSMPSTHSSAALCTLLSACR 628
P + + +I ++ G+ EA YNL+K +LSAC
Sbjct: 705 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 629 LYGDTEIGEAIAKQILK---LEPRNSSSYVLISNILAEGGRWDE 669
G E ++K +EP N YV + + L GR E
Sbjct: 765 HGGLVEESYFHLNSMVKDYGIEPEN-RHYVCMVDALGRSGRLRE 807
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 156/543 (28%), Positives = 265/543 (48%), Gaps = 16/543 (2%)
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
D F+ SL+ YS G + DA ++FD I D+V+ +I+ Y + R S
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH--RLFEESLRFFSK 140
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
M N ++ S++ A + L + + + I+ G+ E+ E+ L+D++ K
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY-FFYEVVESALIDVFSKNL 199
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
+ A VF ++ S V WN +IA L N F+LF +M PD T ++
Sbjct: 200 RFEDAYKVF--RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSV 257
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 312
+ +CA L+ L GK + +I+ G E D+ CTA+VDLY+K + +A ++F R+ N
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
V + VM++GY K++ A+ +F EM V N ++ISA + A +H +
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVF---NRMRSRDLVSWTSMITGYVHHGHI 429
V + + +A +I Y+K G + + VF + ++ +++V+ MIT +
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKP 434
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 489
+AI LF + +E LR D ++ SL LS L CL+ K+VH T ++ +L+V +SL
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSL---LSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL 491
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 549
T Y+KCG L + LFQ + + W +M+ + +G E + LF+ M PDE
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 609
T ++LT CS + G +I +R I G + ++++ S+ G L A +
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 610 SMP 612
+P
Sbjct: 611 RLP 613
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 3/307 (0%)
Query: 267 KSIHGYMIRMGVEP-DMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 324
K + +++R + P D+ +L+ YS + A K+F+ + D V N+M++GY +
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
+ L E++ F +M + N + ++ISA S L+ + + + ++ Y +
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVV 187
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
+ +I ++K + A VF S ++ W ++I G + + + LF +
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 504
+ DS T S+L A + L L K V + +++ V +++ YAKCG + A
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKC-GAEDVFVCTAIVDLYAKCGHMAEAME 306
Query: 505 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
+F ++ + SW ML Y + L++F M+ ++ + T TS+++AC +
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 565 VEEGLQI 571
V E Q+
Sbjct: 367 VCEASQV 373
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/630 (32%), Positives = 342/630 (54%), Gaps = 22/630 (3%)
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSC-VYGAFRIASTMQ 135
+ + L+ LY G + A FD I N+D+ A+ +I+ Y +G S V F + M
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL--FML 145
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
L P+ T S+L A ++ +G IH A++ GF + D +L+ +Y + V
Sbjct: 146 SSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGF-MWDVYVAASLIHLYSRYKAV 201
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL---FRQMIHRKVLPDLLTLAN 252
A +F +M +GSWN +I+ Y +G A EA L R M D +T+ +
Sbjct: 202 GNARILFDEMPVRD--MGSWNAMISGYCQSGNAKEALTLSNGLRAM-------DSVTVVS 252
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD 311
+ +C E G +IH Y I+ G+E ++ L+DLY++F + +K+F+R+ +D
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD 312
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
+ +N ++ Y N+ P+ AI++F EM + P+ ++L S +S L DIR RS+ G
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 372 YVLRH-QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
+ LR ++ + I N ++ YAK G + AR VFN + + D++SW ++I+GY +G
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 431 EAIILFRLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 489
EAI ++ +++ E + + T +S+L A SQ G L ++H + ++ V SL
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 549
Y KCG+L A LF Q+ WN ++ + HG+ + + LF M +KPD
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 609
+TF ++L+ACSHSGLV+EG F M +Y I P HY C++D+ RAGQL A +K
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 610 SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 669
SM ++ LLSACR++G+ ++G+ ++ + ++EP + +VL+SN+ A G+W+
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 672
Query: 670 VAHIRAMTKDKELKSTPGYSLIELDKQREV 699
V IR++ K L+ TPG+S +E+D + EV
Sbjct: 673 VDEIRSIAHGKGLRKTPGWSSMEVDNKVEV 702
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 204/409 (49%), Gaps = 8/409 (1%)
Query: 26 RRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLY 85
+ L L N ++D + L +C G G +H SIK L S+ FV + LI LY
Sbjct: 233 KEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 86 SEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVT 145
+E+G+L D +VFD + +DL+++ SII AY + A + M+ R+ P+ +T
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP--LRAISLFQEMRLSRIQPDCLT 350
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
L+SL ++LG ++ R++ G+ +R+G+ + D ++ MY K G V A AVF +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDYLC 264
+T V SWN +I+ Y NG A EA E++ M ++ + T + + +C++ L
Sbjct: 411 --PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYL 323
G +HG +++ G+ D+ T+L D+Y K + A +F ++ ++V +N ++ +
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RV 382
+ +A+ +F EM+ V P+ F+ L+SA S + + + IT +
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 383 EIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHID 430
+ ++ Y + G L+ A M D W ++++ HG++D
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 216/699 (30%), Positives = 373/699 (53%), Gaps = 47/699 (6%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKL-EDAHRVFDEI 101
+ L CV LG GK +H IK L D VG++L+ +Y+++G + DA+ FD I
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 102 TNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG---S 158
+KD+V++ +II ++ + + + AFR M + PN T+ ++L A + +
Sbjct: 185 ADKDVVSWNAIIAGFSEN--NMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIA 242
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
+ GR IH Y ++R + +L+ Y + G ++ AA++F +M S + SWN +
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG--SKDLVSWNVV 300
Query: 219 IAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 277
IA Y N + +AF+LF ++H+ V PD +T+ + + CA+L L GK IH Y++R
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 278 -VEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 335
+ D AL+ Y++F D + A F + KD + +N ++ + + + +N+
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 336 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE---IANQIIHTY 392
H ++ +++ + L+L+ +++ I + +HGY ++ + E + N ++ Y
Sbjct: 421 HHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 393 AKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHID--------------------- 430
AKCG ++YA +F + R LVS+ S+++GYV+ G D
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMV 540
Query: 431 ----------EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 480
EAI +FR +Q +R ++VT+++LL +QL L V++ H R G
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG 600
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
++ + +L+ YAKCG L A +FQ R L + AM+ YA+HG E L +++HM
Sbjct: 601 -DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
NIKPD + T++LTAC H+GL+++GLQI+ S+ + + P Y C +DL++R G+
Sbjct: 660 TESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGR 719
Query: 601 LTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNI 660
L +AY+ V MP ++ TLL AC Y ++G ++A +L+ E ++ ++VLISN+
Sbjct: 720 LDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNM 779
Query: 661 LAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
A +W+ V +R + K KE+K G S +E+D QR V
Sbjct: 780 YAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNV 818
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 280/579 (48%), Gaps = 23/579 (3%)
Query: 34 SKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED 93
S F D +K+C ++ L G+ +H KL + V S++ +Y++ +++D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 94 AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAA 153
++F ++ + D V + ++T + S G F+ + + P+ VT +L
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK--PSSVTFAIVLPLC 132
Query: 154 AKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVG 213
+LG G+++H Y I+ G D + L+ MY K G + A V
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEK-DTLVGNALVSMYAKFGFI-FPDAYTAFDGIADKDVV 190
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD--YLCH-GKSIH 270
SWN +IA + N +AF F M+ P+ T+AN + CA +D C G+ IH
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 271 GYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 328
Y++ R ++ + C +LV Y + + +A +F R+ +KD V +NV++ GY N
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 329 VEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR-VEIAN 386
+A +FH ++ K VSP+ ++++ + L D+ + IH Y+LRH Y+ + N
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 387 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 446
+I YA+ G A F+ M ++D++SW +++ + + + L L E + +
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL 430
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRA--FHG-KELSVNNSLITTYAKCGKLNMAR 503
DSVT++SLL+ + + VKEVH + +A H +E + N+L+ YAKCG + A
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAH 490
Query: 504 YLFQQMTE-RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 562
+F ++E R L S+N++L Y G++ + LF M D T++ ++ + S
Sbjct: 491 KIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS----TTDLTTWSLMVRIYAES 546
Query: 563 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
E + +FR I+ + P V I++LL QL
Sbjct: 547 CCPNEAIGVFRE-IQARGMRPNTV---TIMNLLPVCAQL 581
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 260/519 (50%), Gaps = 38/519 (7%)
Query: 128 FRIASTM-QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
FR+ S D R++ + ++ A A + L GRA+HG + G C E+ ++L
Sbjct: 11 FRLLSGFGTDHRVF------LDVVKACASVSDLTSGRALHGCVFKLGHIACSEV-SKSVL 63
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLP 245
+MY KC + +F +M++ V WN ++ L E F+ M + P
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVV--WNIVLTG-LSVSCGRETMRFFKAMHFADEPKP 120
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV--TKARKM 303
+T A + C L +GKS+H Y+I+ G+E D + ALV +Y+KF A
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL-RD 362
F+ + +KD V +N ++ G+ +N++ +A F M+K PN A N++ + + ++
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 363 I--RLARSIHGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
I R R IH YV++ ++ T V + N ++ Y + G ++ A +F RM S+DLVSW +
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 420 ITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-A 477
I GY + +A LF L+ + ++ DSVT+IS+L +QL L++ KE+H R +
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 537
+ ++ SV N+LI+ YA+ G + A + F M+ + + SWNA+L A+A + L L
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 538 NHMKLGNIKPDELTFTSILTACSHS---GLVEEGLQIFRSMIREYTIVPGEVHY------ 588
+H+ I D +T S+L C + G V+E + Y++ G +H
Sbjct: 421 HHLLNEAITLDSVTILSLLKFCINVQGIGKVKE--------VHGYSVKAGLLHDEEEPKL 472
Query: 589 -NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
N ++D ++ G + A+ + + + + +LLS
Sbjct: 473 GNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/694 (29%), Positives = 366/694 (52%), Gaps = 24/694 (3%)
Query: 17 RRRHYGEVLRRYL------DLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN 70
R Y EVL ++ DL F+ C +K+C + + G VH +K
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPC-----VIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 71 LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRI 130
L D FVG++L+ Y +G + DA ++FD + ++LV++ S+I ++ +G S +F +
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS--EESFLL 275
Query: 131 ASTMQDQR----LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
M ++ P+ TLV++L A+ + G+ +HG+A++ + + L+
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK-ELVLNNALM 334
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH--RKVL 244
DMY KCG + A +F KMN V SWN ++ + G F++ RQM+ V
Sbjct: 335 DMYSKCGCITNAQMIF-KMNNNKNVV-SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 245 PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKM 303
D +T+ NA+ C +L K +H Y ++ + + A V Y+K ++ A+++
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
F +R+K +N ++ G+ +++ P +++ +M + P+ +L+SA S L+ +
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 512
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 423
RL + +HG+++R+ + + ++ Y CG L + +F+ M + LVSW ++ITGY
Sbjct: 513 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL 483
+ +G D A+ +FR + +++ ++++ + A S L L +E H + +
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA 632
Query: 484 SVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
+ SLI YAK G + + +F + E+ SWNAM+ Y +HG E +KLF M+
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRT 692
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
PD+LTF +LTAC+HSGL+ EGL+ M + + P HY C+ID+L RAGQL +
Sbjct: 693 GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 752
Query: 604 AYNLVKSMPSTHSSAALC-TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 662
A +V S + + +LLS+CR++ + E+GE +A ++ +LEP +YVL+SN+ A
Sbjct: 753 ALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
Query: 663 EGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
G+W++V +R + L+ G S IEL+++
Sbjct: 813 GLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRK 846
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 223/446 (50%), Gaps = 12/446 (2%)
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
R L LL A+ K ++ GR IH D++ T ++ MY CG + VF
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLANAILSCAELD 261
+ S + WN +I++Y N E E F +MI +LPD T I +CA +
Sbjct: 144 DALR--SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMT 320
+ G ++HG +++ G+ D+ ALV Y VT A ++F+ + ++ V +N M+
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 321 GYLKNDLPVEAINVFHEMIKM----SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 376
+ N E+ + EM++ + P+VA + ++ + R+I L + +HG+ ++
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 377 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 436
+ + + N ++ Y+KCG + A+++F ++++VSW +M+ G+ G +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 437 R--LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA-FHGKELSVNNSLITTY 493
R L E+++ D VT+++ + L ++KE+HC + + F EL V N+ + +Y
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANAFVASY 440
Query: 494 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
AKCG L+ A+ +F + + + SWNA++G +A + L MK+ + PD T
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 554 SILTACSHSGLVEEGLQIFRSMIREY 579
S+L+ACS + G ++ +IR +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNW 526
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 8/298 (2%)
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEI-ANQIIHTYAKCGYLQYARLVFNRMRSR 411
L+ A +DI + R IH V + ++ +II YA CG +R VF+ +RS+
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 412 DLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
+L W ++I+ Y + DE + F ++ +L D T +++A + + + V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 530
H L + +++ V N+L++ Y G + A LF M ER L SWN+M+ ++ +G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 531 AEVLKLFNHMKL----GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 586
E L M G PD T ++L C+ + G + ++ + V
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK-LRLDKELV 328
Query: 587 HYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQIL 644
N ++D+ S+ G +T A + K M + + + T++ GDT + +Q+L
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 489 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKP 547
+IT YA CG + +R++F + + L WNA++ +Y+ + Y EVL+ F M ++ P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 607
D T+ ++ AC+ V GL + ++ + +V N ++ G +T+A L
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAV-HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 244
Query: 608 VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 665
MP + L + S R++ D E S++L+ ++ E G
Sbjct: 245 FDIMPERN----LVSWNSMIRVFSDNGFSE--------------ESFLLLGEMMEENG 284
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 208/679 (30%), Positives = 362/679 (53%), Gaps = 17/679 (2%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN-LNSDCFVGS 79
Y L + + S S D + + +C L G VH +K + + VG+
Sbjct: 106 YARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGA 165
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
S + YS+ G L+DA VFDE+ ++D+VA+T+II+ + +G S G M
Sbjct: 166 SFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGES--EGGLGYLCKMHSAGS 223
Query: 140 ---YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
PN TL A + LG+L+EGR +HG+A++ G + ++++ Y K G
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGL-ASSKFVQSSMFSFYSKSGNPS 282
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A F ++ + SW +IA+ +G E+F++F +M ++ + PD + ++ I
Sbjct: 283 EAYLSFRELG--DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINE 340
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLR---NKDA 312
++ + GK+ HG++IR D C +L+ +Y KF++ + A K+F R+ NK+A
Sbjct: 341 LGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEA 400
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
+N M+ GY K V+ I +F ++ + + + A ++IS+ S + + L +S+H Y
Sbjct: 401 --WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 432
V++ + + N +I Y K G L A +F + ++++W +MI YVH ++A
Sbjct: 459 VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKA 517
Query: 433 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 492
I LF + EN + S+TL++LL A G L + +H H LS++ +LI
Sbjct: 518 IALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
YAKCG L +R LF ++ WN M+ Y MHG+ + LF+ M+ ++KP TF
Sbjct: 578 YAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTF 637
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
++L+AC+H+GLVE+G ++F M +Y + P HY+C++DLLSR+G L EA + V SMP
Sbjct: 638 LALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 672
+ TLLS+C +G+ E+G +A++ + +P+N Y++++N+ + G+W+E
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAER 756
Query: 673 IRAMTKDKELKSTPGYSLI 691
R M ++ + G+S++
Sbjct: 757 AREMMRESGVGKRAGHSVV 775
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/606 (25%), Positives = 279/606 (46%), Gaps = 28/606 (4%)
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
I L+ + FV S LI Y+ YGK + RVF +T +D+ + SII A+ +G
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
F + + Q P+ T ++ A A+L G +HG ++ G + + +
Sbjct: 111 CFFFSMLLSGQS--PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFV 168
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV--- 243
Y KCG ++ A VF +M V +W +I+ ++ NG++ +M
Sbjct: 169 YFYSKCGFLQDACLVFDEM--PDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARK 302
P+ TL +C+ L L G+ +HG+ ++ G+ +++ YSK + ++A
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
F L ++D + ++ ++ E+ ++F EM + P+ + LI+ + +
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMIT 421
+ ++ HG+V+RH + + N ++ Y K L A +F R+ + +W +M+
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
GY + I LFR +Q + IDS + S++ + S +G + K +HC +
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
+SV NSLI Y K G L +A +F + +T WNAM+ +Y + + LF+ M
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMFCEADTNVIT-WNAMIASYVHCEQSEKAIALFDRMV 525
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN-----CIIDLLS 596
N KP +T ++L AC ++G +E G MI Y I E N +ID+ +
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERG-----QMIHRY-ITETEHEMNLSLSAALIDMYA 579
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALC--TLLSACRLYGDTEIGEAIAKQILK--LEPRNSS 652
+ G L ++ L + + A+C ++S ++GD E A+ Q+ + ++P +
Sbjct: 580 KCGHLEKSREL---FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 653 SYVLIS 658
L+S
Sbjct: 637 FLALLS 642
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 335/634 (52%), Gaps = 10/634 (1%)
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
+K + D +VG+ LI Y + G ++ A VFD + K V +T++I+ G S Y
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS--YV 232
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
+ ++ + + + P+ L ++L A + L L+ G+ IH + +R G + D L+
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM-DASLMNVLI 291
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD 246
D Y KCG V A +F M + + SW L++ Y N EA ELF M + PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGM--PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 247 LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFE 305
+ ++ + SCA L L G +H Y I+ + D +L+D+Y+K D +T ARK+F+
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Query: 306 RLRNKDAVIYNVMMTGY--LKNDLPV-EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
D V++N M+ GY L + EA+N+F +M + P++ F++L+ A + L
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 422
+ L++ IHG + ++ + + +I Y+ C L+ +RLVF+ M+ +DLV W SM G
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529
Query: 423 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 482
YV +EA+ LF LQ R D T +++ A L + +E HC +
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECN 589
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
+ N+L+ YAKCG A F R + WN+++ +YA HG + L++ M
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 602
I+P+ +TF +L+ACSH+GLVE+GL+ F M+R + I P HY C++ LL RAG+L
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLN 708
Query: 603 EAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 662
+A L++ MP+ ++ +LLS C G+ E+ E A+ + +P++S S+ ++SNI A
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYA 768
Query: 663 EGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
G W E +R K + + PG S I ++K+
Sbjct: 769 SKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKE 802
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 176/658 (26%), Positives = 312/658 (47%), Gaps = 58/658 (8%)
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA 115
L + VH I L D ++ + LI LYS G + A +VF+++ ++LV+++++++A
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 116 YAHSG--GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA------IHG 167
H G + T +D PN L S + A + L +GR +
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDS---PNEYILSSFIQACSGL----DGRGRWMVFQLQS 172
Query: 168 YAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 227
+ ++ GF D T L+D Y K G + A VF + ST +W +I+ + G+
Sbjct: 173 FLVKSGFDR-DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV--TWTTMISGCVKMGR 229
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
+ + +LF Q++ V+PD L+ + +C+ L +L GK IH +++R G+E D
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 288 LVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 346
L+D Y K V A K+F + NK+ + + +++GY +N L EA+ +F M K + P+
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 347 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 406
+ +++++ + L + +H Y ++ + N +I YAKC L AR VF+
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Query: 407 RMRSRDLVSWTSMITGYVHHG---HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 463
+ D+V + +MI GY G + EA+ +FR ++ +R +T +SLL+A + L
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
L K++H L ++ ++ ++LI Y+ C L +R +F +M + L WN+M
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS-----------HSGLVEEGLQ-- 570
Y E L LF ++L +PDE TF +++TA H L++ GL+
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECN 589
Query: 571 --IFRSMIREYTIV--PGEVH-------------YNCIIDLLSRAGQLTEAYNLVKSMPS 613
I +++ Y P + H +N +I + G+ +A +++ M S
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 614 THSSAALCT---LLSACRLYGDTEIGEAIAKQILK--LEPRNSSSYVLISNILAEGGR 666
T +LSAC G E G + +L+ +EP + YV + ++L GR
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE-TEHYVCMVSLLGRAGR 706
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 273/566 (48%), Gaps = 12/566 (2%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
L+ + L D ++ L +C L LE GK++H ++ L D + + LI
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRV 144
Y + G++ AH++F+ + NK+++++T++++ Y + + A + ++M L P+
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN--ALHKEAMELFTSMSKFGLKPDMY 351
Query: 145 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 204
S+L + A L +L G +H Y I+ G D +L+DMY KC + A VF
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLG-NDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 205 MNATSTTVGSWNPLIAAYLHNGQALE---AFELFRQMIHRKVLPDLLTLANAILSCAELD 261
A + +N +I Y G E A +FR M R + P LLT + + + A L
Sbjct: 411 FAAADVVL--FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMT 320
L K IHG M + G+ D+ A +AL+D+YS + + +R +F+ ++ KD VI+N M
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
GY++ EA+N+F E+ P+ F N+++A +L ++L + H +L+
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 440
I N ++ YAKCG + A F+ SRD+V W S+I+ Y +HG +A+ + +
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
E + + +T + +L A S G + + L R E +++ + G+LN
Sbjct: 649 SEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 501 MARYLFQQM-TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
AR L ++M T+ W ++L A GN E+ + M + + D +FT +
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLSGCAKAGN-VELAEHAAEMAILSDPKDSGSFTMLSNIY 767
Query: 560 SHSGLVEEGLQIFRSMIREYTIV-PG 584
+ G+ E ++ M E + PG
Sbjct: 768 ASKGMWTEAKKVRERMKVEGVVKEPG 793
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 214/427 (50%), Gaps = 14/427 (3%)
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
R LL A L +HG I G + D L+++Y + GG+ A VF
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLEL-DTYLSNILINLYSRAGGMVYARKVF 102
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLANAILSCAELD 261
KM + SW+ +++A H+G E+ +F + RK P+ L++ I +C+ LD
Sbjct: 103 EKM--PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD 160
Query: 262 YLCHGK----SIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYN 316
G+ + ++++ G + D+ T L+D Y K ++ AR +F+ L K V +
Sbjct: 161 --GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWT 218
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 376
M++G +K ++ +F+++++ +V P+ + ++SA S L + + IH ++LR+
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 377 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 436
+ N +I +Y KCG + A +FN M +++++SWT++++GY + EA+ LF
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
+ + L+ D S+L + + L L +VH T +A G + V NSLI YAKC
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV---LKLFNHMKLGNIKPDELTFT 553
L AR +F + +NAM+ Y+ G E+ L +F M+ I+P LTF
Sbjct: 399 DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFV 458
Query: 554 SILTACS 560
S+L A +
Sbjct: 459 SLLRASA 465
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 177/355 (49%), Gaps = 13/355 (3%)
Query: 258 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYN 316
A D L + +HG +I G+E D L++LYS+ + ARK+FE++ ++ V ++
Sbjct: 55 ASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWS 114
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKM-SVSPNVALFLNLISAVS--DLRDIRLARSIHGYV 373
M++ + + E++ VF E + SPN + + I A S D R + + ++
Sbjct: 115 TMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFL 174
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
++ + V + +I Y K G + YARLVF+ + + V+WT+MI+G V G ++
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 493
LF L +N+ D L ++L A S L L K++H R + S+ N LI +Y
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 494 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
KCG++ A LF M + + SW +L Y + + E ++LF M +KPD +
Sbjct: 295 VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354
Query: 554 SILTACSHSGLVEEGLQIFRSMIREYTIVP--GEVHY--NCIIDLLSRAGQLTEA 604
SILT+C+ + G Q + YTI G Y N +ID+ ++ LT+A
Sbjct: 355 SILTSCASLHALGFGTQ-----VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 220/657 (33%), Positives = 347/657 (52%), Gaps = 25/657 (3%)
Query: 55 RLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK-DLVAYTSII 113
R E GK++H ++ +L++D F+ ++LI +Y ++G DA RVF EI +K ++V + +I
Sbjct: 185 RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 114 TAYAHSGGSCVYGAFRIASTMQDQRLYP--NRVTLVSLLHAAAKLGSLQE------GRAI 165
+ SG I + D + N V LVS A LG+ + GR I
Sbjct: 245 VGFGGSG---------ICESSLDLYMLAKNNSVKLVSTSFTGA-LGACSQSENSGFGRQI 294
Query: 166 HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
H ++ G D T+LL MY KCG V A VF + + WN ++AAY N
Sbjct: 295 HCDVVKMGLHN-DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI--WNAMVAAYAEN 351
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
A +LF M + VLPD TL+N I C+ L +GKS+H + + ++
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 286 TALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM--S 342
+AL+ LYSK A +F+ + KD V + +++G KN EA+ VF +M S
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
+ P+ + ++ +A + L +R +HG +++ + V + + +I Y+KCG + A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
VF M + ++V+W SMI+ Y + + +I LF L+ + + DSV++ S+L A+S
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
L K +H T R + + N+LI Y KCG A +F++M + L +WN M+
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
Y HG+ L LF+ MK PD++TF S+++AC+HSG VEEG IF M ++Y I
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 642
P HY ++DLL RAG L EAY+ +K+MP S+ LLSA R + + E+G A++
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 643 ILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
+L++EP S+YV + N+ E G +E A + + K+K L PG S IE+ + V
Sbjct: 772 LLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNV 828
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 185/686 (26%), Positives = 314/686 (45%), Gaps = 68/686 (9%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFD------- 99
LK+C AL L +GK +H + L D F+ +SL+ +Y + G L+ A +VFD
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 100 EITNKDLVAYTSIITAY-----AHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAA 154
++ +D+ + S+I Y G C FR M + P+ +L ++
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGC----FR---RMLVFGVRPDAFSLSIVVSVMC 179
Query: 155 KLGSL--QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 212
K G+ +EG+ IHG+ +R D +T L+DMY K G A VF ++ S V
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDT-DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY 272
WN +I + +G + +L+ + V + A+ +C++ + G+ IH
Sbjct: 239 -LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD 297
Query: 273 MIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 331
+++MG+ D CT+L+ +YSK V +A +F + +K I+N M+ Y +ND A
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSA 357
Query: 332 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
+++F M + SV P+ N+IS S L +S+H + + + I + ++
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 392 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN--LRIDSV 449
Y+KCG A LVF M +D+V+W S+I+G +G EA+ +F ++ ++ L+ DS
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 450 TLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 509
+ S+ A + L L +VH + + V +SLI Y+KCG MA +F M
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537
Query: 510 TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGL 569
+ + +WN+M+ Y+ + + LFN M I PD ++ TS+L A S + + +G
Sbjct: 538 STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
Query: 570 QIFRSMIREYTIVPGEVHY-NCIIDLLSRAGQLTEAYNLVKSMP---------------- 612
+ +R +P + H N +ID+ + G A N+ K M
Sbjct: 598 SLHGYTLR--LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS 655
Query: 613 ------------------STHSSAALCTLLSACRLYGDTEIGEAI---AKQILKLEPRNS 651
+ +L+SAC G E G+ I KQ +EP N
Sbjct: 656 HGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEP-NM 714
Query: 652 SSYVLISNILAEGGRWDEV-AHIRAM 676
Y + ++L G +E + I+AM
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 278/558 (49%), Gaps = 15/558 (2%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
L Y+ KN+ L ++ T L +C FG+++H D +K+ L++D +V +SL+ +
Sbjct: 257 LDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSM 316
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRV 144
YS+ G + +A VF + +K L + +++ AYA + Y A + M+ + + P+
Sbjct: 317 YSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG--YSALDLFGFMRQKSVLPDSF 374
Query: 145 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 204
TL +++ + LG G+++H +R I E+ LL +Y KCG A VF
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI-ESALLTLYSKCGCDPDAYLVFKS 433
Query: 205 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI--HRKVLPDLLTLANAILSCAELDY 262
M +W LI+ NG+ EA ++F M + PD + + +CA L+
Sbjct: 434 MEEKDMV--AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA 491
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTG 321
L G +HG MI+ G+ ++ ++L+DLYSK + + A K+F + ++ V +N M++
Sbjct: 492 LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISC 551
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
Y +N+LP +I++F+ M+ + P+ +++ A+S + +S+HGY LR +
Sbjct: 552 YSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSD 611
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
+ N +I Y KCG+ +YA +F +M+ + L++W MI GY HG A+ LF +++
Sbjct: 612 THLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Query: 442 ENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--SLITTYAKCGKL 499
D VT +SL+ A + G + K + + + G E ++ + +++ + G L
Sbjct: 672 AGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDY-GIEPNMEHYANMVDLLGRAGLL 730
Query: 500 NMARYLFQQMTERCLTS-WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE-LTFTSILT 557
A + M +S W +L A H N L + + KL ++P+ T+ ++
Sbjct: 731 EEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE--LGILSAEKLLRMEPERGSTYVQLIN 788
Query: 558 ACSHSGLVEEGLQIFRSM 575
+GL E ++ M
Sbjct: 789 LYMEAGLKNEAAKLLGLM 806
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 348 bits (893), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 345/666 (51%), Gaps = 16/666 (2%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYG---KLEDA 94
+D + LKSC+ GK VH I+ ++ D + +SLI LYS+ G K ED
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 95 HRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAA 154
+D+V++++++ Y ++G A ++ + L PN +++ A +
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRE--LDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 155 KLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC-GGVKMAAAVFGKMNATSTTVG 213
+ GR G+ ++ G D +L+DM+ K + A VF KM + V
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM--SELNVV 235
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
+W +I + G EA F M+ D TL++ +CAEL+ L GK +H +
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 274 IRMGVEPDMVACTALVDLYSKFD----VTKARKMFERLRNKDAVIYNVMMTGYLKN-DLP 328
IR G+ D V C+ LVD+Y+K V RK+F+R+ + + + ++TGY+KN +L
Sbjct: 296 IRSGLVDD-VECS-LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 329 VEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 387
EAIN+F EMI V PN F + A +L D R+ + + G + + +AN
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 388 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 447
+I + K ++ A+ F + ++LVS+ + + G + + ++A L + L +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 448 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQ 507
+ T SLL ++ +G + +++H + V N+LI+ Y+KCG ++ A +F
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 508 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE 567
M R + SW +M+ +A HG VL+ FN M +KP+E+T+ +IL+ACSH GLV E
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 568 GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSAC 627
G + F SM ++ I P HY C++DLL RAG LT+A+ + +MP T L AC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Query: 628 RLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPG 687
R++ +TE+G+ A++IL+L+P ++Y+ +SNI A G+W+E +R K++ L G
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGG 713
Query: 688 YSLIEL 693
S IE+
Sbjct: 714 CSWIEV 719
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 205/453 (45%), Gaps = 15/453 (3%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E +R +LD+ S F D ++ +C L L GK++H +I+ L D V SL+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLV 309
Query: 83 RLY---SEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
+Y S G ++D +VFD + + ++++T++IT Y + + + +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 199
PN T S A L + G+ + G A +RG + +++ M+ K ++ A
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV-ANSVISMFVKSDRMEDAQ 428
Query: 200 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
F + + + S+N + N +AF+L ++ R++ T A+ + A
Sbjct: 429 RAFESL--SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 318
+ + G+ IH ++++G+ + C AL+ +YSK + A ++F + N++ + + M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA-RSIHGYVLRHQ 377
+TG+ K+ + + F++MI+ V PN ++ ++SA S + + R + H+
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAIILF 436
++E ++ + G L A N M + D++ W + + H + + L
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE----LG 662
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
+L R+ L +D + +Q + C +E
Sbjct: 663 KLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 12 LVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNL 71
L +CR ++ + + ++ + + L +G + G+++H +KL L
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
+ + V ++LI +YS+ G ++ A RVF+ + N++++++TS+IT +A G A R+
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG-----FAIRVL 560
Query: 132 ST---MQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
T M ++ + PN VT V++L A + +G + EG
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 348 bits (893), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 213/675 (31%), Positives = 358/675 (53%), Gaps = 47/675 (6%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
L+N F + +C K+C AL FG+ VH +K L FV SSL +Y + G
Sbjct: 165 LENEIFPDNFVVPNVC-KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV 223
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
L+DA +VFDEI +++ VA+ +++ Y +G + A R+ S M+ Q + P RVT+ + L
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGYVQNGKN--EEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
A+A +G ++EG+ H AI G + D I T+LL+ Y K G ++ A VF +M
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMEL-DNILGTSLLNFYCKVGLIEYAEMVFDRM--FEK 338
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
V +WN +I+ Y+ G +A + + M K+ D +TLA + + A + L GK +
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 271 GYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 329
Y IR E D+V + ++D+Y+K + A+K+F+ KD +++N ++ Y ++ L
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 389
EA+ +F+ M V PNV + N II
Sbjct: 459 EALRLFYGMQLEGVPPNVITW-----------------------------------NLII 483
Query: 390 HTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
+ + G + A+ +F +M+S +L+SWT+M+ G V +G +EAI+ R +Q LR
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF-HGKELSVNNSLITTYAKCGKLNMARY 504
++ ++ L A + L L + +H R H +S+ SL+ YAKCG +N A
Sbjct: 544 PNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEK 603
Query: 505 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
+F L NAM+ AYA++GN E + L+ ++ +KPD +T T++L+AC+H+G
Sbjct: 604 VFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
+ + ++IF ++ + ++ P HY ++DLL+ AG+ +A L++ MP + + +L+
Sbjct: 664 INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLV 723
Query: 625 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 684
++C TE+ + +++++L+ EP NS +YV ISN A G WDEV +R M K K LK
Sbjct: 724 ASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKK 783
Query: 685 TPGYSLIELDKQREV 699
PG S I++ + V
Sbjct: 784 KPGCSWIQITGEEGV 798
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 254/492 (51%), Gaps = 8/492 (1%)
Query: 159 LQEGRAIHGYAIRRG-FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNP 217
L G+ IH ++ G F +E ET L+ Y KC +++A +F K+ + V SW
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRN--VFSWAA 143
Query: 218 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 277
+I G A F +M+ ++ PD + N +C L + G+ +HGY+++ G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 278 VEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 336
+E + ++L D+Y K V A K+F+ + +++AV +N +M GY++N EAI +F
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 337 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 396
+M K V P +SA +++ + + H + + + +++ Y K G
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 397 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 456
++YA +VF+RM +D+V+W +I+GYV G +++AI + +L++ E L+ D VTL +L+
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 457 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS 516
A ++ L KEV C R ++ + ++++ YAKCG + A+ +F E+ L
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 576
WN +L AYA G E L+LF M+L + P+ +T+ I+ + +G V+E +F M
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM- 502
Query: 577 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDT 633
+ I+P + + +++ + + G EA ++ M + ++ ++ LSAC
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Query: 634 EIGEAIAKQILK 645
IG I I++
Sbjct: 563 HIGRTIHGYIIR 574
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 195/410 (47%), Gaps = 21/410 (5%)
Query: 216 NPLIAAYLH-------NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
+P +Y H NG+ EA L +M R + + C L GK
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 269 IHGYMIRMGVEPDMVA-----CTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGY 322
IH +++ G D A T LV Y+K D + A +F +LR ++ + ++
Sbjct: 92 IHARILKNG---DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 382
+ L A+ F EM++ + P+ + N+ A L+ R R +HGYV++ V
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 383 EIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 442
+A+ + Y KCG L A VF+ + R+ V+W +++ GYV +G +EAI LF ++++
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 443 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLN 500
+ VT+ + L A + +G + K+ H + +G EL + SL+ Y K G +
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI--VNGMELDNILGTSLLNFYCKVGLIE 326
Query: 501 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 560
A +F +M E+ + +WN ++ Y G + + + M+L +K D +T ++++A +
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 561 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 610
+ ++ G ++ IR ++ V + ++D+ ++ G + +A + S
Sbjct: 387 RTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 225/660 (34%), Positives = 355/660 (53%), Gaps = 24/660 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLN-SDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD 105
L++C+ L G+ +H +K +L S V +L RLY+ ++E A VFDEI +
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPR 65
Query: 106 L--VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGR 163
+ +A+ +I AYA + A + M + + P + T +L A A L ++ +G+
Sbjct: 66 INPIAWDLMIRAYASN--DFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 164 AIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
IH + F D T L+D Y KCG ++MA VF +M +WN +I+ +
Sbjct: 124 LIHSHVNCSDFAT-DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMV--AWNAMISGFS 180
Query: 224 HNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 282
+ + LF M L P+L T+ + L GK++HGY RMG D+
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 283 VACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
V T ++D+Y+K + AR++F+ K+ V ++ M+ GY++N++ EA VF +M+
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML-- 298
Query: 342 SVSPNVALFLN-----LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 396
V+ NVA+ ++ + D+ R +H Y ++ +I + + N II YAK G
Sbjct: 299 -VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYG 357
Query: 397 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 456
L A F+ + +D++S+ S+ITG V + +E+ LF ++ +R D TL+ +L
Sbjct: 358 SLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 457 ALSQLGCLSAVKEVHCLTYRAFHGKEL--SVNNSLITTYAKCGKLNMARYLFQQMTERCL 514
A S L L H Y HG + S+ N+L+ Y KCGKL++A+ +F M +R +
Sbjct: 418 ACSHLAALGHGSSCH--GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDI 475
Query: 515 TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 574
SWN ML + +HG E L LFN M+ + PDE+T +IL+ACSHSGLV+EG Q+F S
Sbjct: 476 VSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNS 535
Query: 575 MIR-EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 633
M R ++ ++P HYNC+ DLL+RAG L EAY+ V MP L TLLSAC Y +
Sbjct: 536 MSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNA 595
Query: 634 EIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
E+G ++K++ L + S VL+SN + RW++ A IR + K + L TPGYS +++
Sbjct: 596 ELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 241/474 (50%), Gaps = 13/474 (2%)
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
+SLL + +L G+ IH + ++R + L +Y C V++A VF ++
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 265
+W+ +I AY N A +A +L+ +M++ V P T + +CA L +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 324
GK IH ++ DM CTALVD Y+K ++ A K+F+ + +D V +N M++G+
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 325 NDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
+ + I +F +M ++ +SPN++ + + A+ +R +++HGY R + +
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA-IILFRLLQRE 442
+ I+ YAK + YAR VF+ ++ V+W++MI GYV + I EA + F++L +
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 443 NLRIDSVTLISL-LQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 501
N+ + + I L L ++ G LS + VHC +A +L+V N++I+ YAK G L
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 502 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 561
A F ++ + + S+N+++ ++ E +LF+ M+ I+PD T +LTACSH
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 562 SGLVEEGLQIFRSMIREYTIVPGEVHY----NCIIDLLSRAGQLTEAYNLVKSM 611
+ G S Y +V G N ++D+ ++ G+L A + +M
Sbjct: 422 LAALGHG-----SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM 470
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 15/239 (6%)
Query: 42 AITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEI 101
AI L L C G L G+ VH ++K D V +++I Y++YG L DA R F EI
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 102 TNKDLVAYTSIITAYAHSGGSCVYG-----AFRIASTMQDQRLYPNRVTLVSLLHAAAKL 156
KD+++Y S+IT CV +FR+ M+ + P+ TL+ +L A + L
Sbjct: 370 GLKDVISYNSLITG-------CVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422
Query: 157 GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 216
+L G + HGY + G+ V I L+DMY KCG + +A VF M+ + SWN
Sbjct: 423 AALGHGSSCHGYCVVHGYAVNTSIC-NALMDMYTKCGKLDVAKRVFDTMHKRD--IVSWN 479
Query: 217 PLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 275
++ + +G EA LF M V PD +TL + +C+ + GK + M R
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/698 (28%), Positives = 366/698 (52%), Gaps = 19/698 (2%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S T +V + EV+ Y ++ + ++++L + SC L G+++
Sbjct: 110 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 169
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
+K L S V +SLI + G ++ A+ +FD+++ +D +++ SI AYA +G +
Sbjct: 170 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH--IEE 227
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFE 182
+FRI S M+ N T+ +LL + + GR IHG ++ GF VC+
Sbjct: 228 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN---- 283
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
TLL MY G A VF +M + + SWN L+A+++++G++L+A L MI
Sbjct: 284 -TLLRMYAGAGRSVEANLVFKQM--PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 340
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKAR 301
+ +T +A+ +C D+ G+ +HG ++ G+ + + ALV +Y K +++++R
Sbjct: 341 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 400
Query: 302 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV---S 358
++ ++ +D V +N ++ GY +++ P +A+ F M VS N ++++SA
Sbjct: 401 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 460
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
DL + + +H Y++ + + + N +I YAKCG L ++ +FN + +R++++W +
Sbjct: 461 DL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 518
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 478
M+ HHGH +E + L ++ + +D + L A ++L L +++H L +
Sbjct: 519 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 578
Query: 479 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 538
+ + N+ Y+KCG++ + R L SWN ++ A HG + EV F+
Sbjct: 579 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 638
Query: 539 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
M IKP +TF S+LTACSH GLV++GL + + R++ + P H C+IDLL R+
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 698
Query: 599 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 658
G+L EA + MP + +LL++C+++G+ + G A+ + KLEP + S YVL S
Sbjct: 699 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 758
Query: 659 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
N+ A GRW++V ++R K +K S ++L +
Sbjct: 759 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDK 796
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/598 (27%), Positives = 294/598 (49%), Gaps = 21/598 (3%)
Query: 23 EVLRRYLDL--KNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
E R+ DL K S F + S +T C +S G +VH K L SD +V ++
Sbjct: 27 EFFRKMCDLGIKPSSFVI-ASLVTACGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTA 82
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
++ LY YG + + +VF+E+ ++++V++TS++ Y+ G I M+ + +
Sbjct: 83 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP--EEVIDIYKGMRGEGVG 140
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
N ++ ++ + L GR I G ++ G E +L+ M G V A
Sbjct: 141 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANY 199
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM--IHRKVLPDLLTLANAILSCA 258
+F +M+ T SWN + AAY NG E+F +F M H +V + T++ +
Sbjct: 200 IFDQMSERDTI--SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLG 255
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKDAVIYNV 317
+D+ G+ IHG +++MG + + C L+ +Y+ + +A +F+++ KD + +N
Sbjct: 256 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 315
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
+M ++ + ++A+ + MI S N F + ++A R +HG V+
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 375
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
I N ++ Y K G + +R V +M RD+V+W ++I GY D+A+ F+
Sbjct: 376 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
Query: 438 LLQRENLRIDSVTLISLLQALSQLG-CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
++ E + + +T++S+L A G L K +H A + V NSLIT YAKC
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 495
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
G L+ ++ LF + R + +WNAML A A HG+ EVLKL + M+ + D+ +F+ L
Sbjct: 496 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGL 555
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 614
+A + ++EEG Q+ + + +N D+ S+ G++ E +VK +P +
Sbjct: 556 SAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPS 609
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 201/401 (50%), Gaps = 3/401 (0%)
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC-HGKSIHGY 272
SWN +++ + G LE E FR+M + P +A+ + +C + G +HG+
Sbjct: 8 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 67
Query: 273 MIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 331
+ + G+ D+ TA++ LY + V+ +RK+FE + +++ V + +M GY P E
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 127
Query: 332 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
I+++ M V N +IS+ L+D L R I G V++ +++ + N +I
Sbjct: 128 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 392 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 451
G + YA +F++M RD +SW S+ Y +GHI+E+ +F L++R + ++S T+
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 247
Query: 452 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 511
+LL L + + +H L + + V N+L+ YA G+ A +F+QM
Sbjct: 248 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 307
Query: 512 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
+ L SWN+++ ++ G + L L M + +TFTS L AC E+G +I
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RI 366
Query: 572 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
++ + ++ N ++ + + G+++E+ ++ MP
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 159/309 (51%), Gaps = 10/309 (3%)
Query: 310 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI-RLARS 368
++ V +N MM+G ++ L +E + F +M + + P+ + +L++A + R
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 428
+HG+V + ++ V ++ I+H Y G + +R VF M R++VSWTS++ GY G
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 488
+E I +++ ++ E + + ++ ++ + L S +++ ++ +L+V NS
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 489 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 548
LI+ G ++ A Y+F QM+ER SWN++ AYA +G+ E ++F+ M+ + D
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH---D 240
Query: 549 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR----AGQLTEA 604
E+ T++ T S G V+ Q + I + G C+ + L R AG+ EA
Sbjct: 241 EVNSTTVSTLLSVLGHVDH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 605 YNLVKSMPS 613
+ K MP+
Sbjct: 299 NLVFKQMPT 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 91/174 (52%), Gaps = 7/174 (4%)
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL-SA 466
M R+ VSW +M++G V G E + FR + ++ S + SL+ A + G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 526
+VH ++ ++ V+ +++ Y G ++ +R +F++M +R + SW +++ Y+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE---GLQIFRSMIR 577
G EV+ ++ M+ + +E + + ++++C GL+++ G QI +++
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVK 171
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/698 (28%), Positives = 366/698 (52%), Gaps = 19/698 (2%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S T +V + EV+ Y ++ + ++++L + SC L G+++
Sbjct: 127 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 186
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
+K L S V +SLI + G ++ A+ +FD+++ +D +++ SI AYA +G +
Sbjct: 187 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH--IEE 244
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFE 182
+FRI S M+ N T+ +LL + + GR IHG ++ GF VC+
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN---- 300
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
TLL MY G A VF +M + + SWN L+A+++++G++L+A L MI
Sbjct: 301 -TLLRMYAGAGRSVEANLVFKQM--PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKAR 301
+ +T +A+ +C D+ G+ +HG ++ G+ + + ALV +Y K +++++R
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 302 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV---S 358
++ ++ +D V +N ++ GY +++ P +A+ F M VS N ++++SA
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
DL + + +H Y++ + + + N +I YAKCG L ++ +FN + +R++++W +
Sbjct: 478 DL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 535
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 478
M+ HHGH +E + L ++ + +D + L A ++L L +++H L +
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 595
Query: 479 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 538
+ + N+ Y+KCG++ + R L SWN ++ A HG + EV F+
Sbjct: 596 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 539 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
M IKP +TF S+LTACSH GLV++GL + + R++ + P H C+IDLL R+
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 715
Query: 599 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 658
G+L EA + MP + +LL++C+++G+ + G A+ + KLEP + S YVL S
Sbjct: 716 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 775
Query: 659 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
N+ A GRW++V ++R K +K S ++L +
Sbjct: 776 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDK 813
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/598 (27%), Positives = 294/598 (49%), Gaps = 21/598 (3%)
Query: 23 EVLRRYLDL--KNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
E R+ DL K S F + S +T C +S G +VH K L SD +V ++
Sbjct: 44 EFFRKMCDLGIKPSSFVI-ASLVTACGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTA 99
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
++ LY YG + + +VF+E+ ++++V++TS++ Y+ G I M+ + +
Sbjct: 100 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP--EEVIDIYKGMRGEGVG 157
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
N ++ ++ + L GR I G ++ G E +L+ M G V A
Sbjct: 158 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANY 216
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM--IHRKVLPDLLTLANAILSCA 258
+F +M+ T SWN + AAY NG E+F +F M H +V + T++ +
Sbjct: 217 IFDQMSERDTI--SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLG 272
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKDAVIYNV 317
+D+ G+ IHG +++MG + + C L+ +Y+ + +A +F+++ KD + +N
Sbjct: 273 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 332
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
+M ++ + ++A+ + MI S N F + ++A R +HG V+
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 392
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
I N ++ Y K G + +R V +M RD+V+W ++I GY D+A+ F+
Sbjct: 393 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
Query: 438 LLQRENLRIDSVTLISLLQALSQLG-CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
++ E + + +T++S+L A G L K +H A + V NSLIT YAKC
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 512
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
G L+ ++ LF + R + +WNAML A A HG+ EVLKL + M+ + D+ +F+ L
Sbjct: 513 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGL 572
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 614
+A + ++EEG Q+ + + +N D+ S+ G++ E +VK +P +
Sbjct: 573 SAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPS 626
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 212/427 (49%), Gaps = 5/427 (1%)
Query: 188 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
MY K G VK A +F M + SWN +++ + G LE E FR+M + P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEV--SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 248 LTLANAILSCAELDYLC-HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFE 305
+A+ + +C + G +HG++ + G+ D+ TA++ LY + V+ +RK+FE
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
+ +++ V + +M GY P E I+++ M V N +IS+ L+D L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 425
R I G V++ +++ + N +I G + YA +F++M RD +SW S+ Y
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 426 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
+GHI+E+ +F L++R + ++S T+ +LL L + + +H L + + V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
N+L+ YA G+ A +F+QM + L SWN+++ ++ G + L L M
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 546 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 605
+ +TFTS L AC E+G +I ++ + ++ N ++ + + G+++E+
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 606 NLVKSMP 612
++ MP
Sbjct: 418 RVLLQMP 424
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 249/530 (46%), Gaps = 7/530 (1%)
Query: 84 LYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNR 143
+Y+++G+++ A +FD + ++ V++ ++++ G M D + P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVG--LYLEGMEFFRKMCDLGIKPSS 58
Query: 144 VTLVSLLHAAAKLGSL-QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
+ SL+ A + GS+ +EG +HG+ + G + D T +L +Y G V + VF
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
+M V SW L+ Y G+ E ++++ M V + +++ I SC L
Sbjct: 118 EEM--PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNKDAVIYNVMMTG 321
G+ I G +++ G+E + +L+ L S +V A +F+++ +D + +N +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
Y +N E+ +F M + N L+S + + + R IHG V++ + +
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
V + N ++ YA G A LVF +M ++DL+SW S++ +V+ G +A+ L +
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 442 ENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 501
++ VT S L A + +H L + + N+L++ Y K G+++
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 502 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 561
+R + QM R + +WNA++G YA + + L F M++ + + +T S+L+AC
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 562 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
G + E + + I E N +I + ++ G L+ + +L +
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 525
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 350/655 (53%), Gaps = 23/655 (3%)
Query: 51 VALGRLEFGKRVH-----VDSIKLNLNSDCFV--GSSLIRLYSEYGKLEDAHRVFDEITN 103
VAL RL KR V SI L+ S V G++ + ++ +G L DA VF +++
Sbjct: 98 VALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSE 157
Query: 104 KDLVAYTSIITAYAHSG----GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSL 159
++L ++ ++ YA G C+Y ++ P+ T +L + L
Sbjct: 158 RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK-----PDVYTFPCVLRTCGGIPDL 212
Query: 160 QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI 219
G+ +H + +R G+ + ++ L+ MY KCG VK A +F +M + SWN +I
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVV-NALITMYVKCGDVKSARLLFDRM--PRRDIISWNAMI 269
Query: 220 AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE 279
+ Y NG E ELF M V PDL+TL + I +C L G+ IH Y+I G
Sbjct: 270 SGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFA 329
Query: 280 PDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 338
D+ C +L +Y + +A K+F R+ KD V + M++GY N LP +AI+ + M
Sbjct: 330 VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM 389
Query: 339 IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL 398
+ SV P+ ++SA + L D+ +H ++ + I+ V +AN +I+ Y+KC +
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 399 QYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQAL 458
A +F+ + ++++SWTS+I G + EA+I R + + L+ +++TL + L A
Sbjct: 450 DKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAAC 508
Query: 459 SQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWN 518
+++G L KE+H R G + + N+L+ Y +CG++N A F ++ +TSWN
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWN 567
Query: 519 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 578
+L Y+ G + V++LF+ M ++PDE+TF S+L CS S +V +GL F M +
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-ED 626
Query: 579 YTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEA 638
Y + P HY C++DLL RAG+L EA+ ++ MP T A LL+ACR++ ++GE
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGEL 686
Query: 639 IAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
A+ I +L+ ++ Y+L+ N+ A+ G+W EVA +R M K+ L G S +E+
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEV 741
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 260/503 (51%), Gaps = 11/503 (2%)
Query: 121 GSCVYG----AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV 176
G C G A ++ ++MQ+ R+ + V+L+ + +EG ++ A+ +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 177 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
E+ L M+ + G + A VFGKM + + SWN L+ Y G EA L+
Sbjct: 128 GVEL-GNAFLAMFVRFGNLVDAWYVFGKM--SERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 237 QMIH-RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF 295
+M+ V PD+ T + +C + L GK +H +++R G E D+ AL+ +Y K
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 296 -DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
DV AR +F+R+ +D + +N M++GY +N + E + +F M +SV P++ ++I
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV 414
SA L D RL R IH YV+ + + + N + Y G + A +F+RM +D+V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 474
SWT+MI+GY ++ D+AI +R++ +++++ D +T+ ++L A + LG L E+H L
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 475 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 534
+A + V N+LI Y+KC ++ A +F + + + SW +++ ++ E L
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
MK+ ++P+ +T T+ L AC+ G + G +I ++R + + N ++D+
Sbjct: 485 IFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLDM 542
Query: 595 LSRAGQLTEAYNLVKSMPSTHSS 617
R G++ A++ S +S
Sbjct: 543 YVRCGRMNTAWSQFNSQKKDVTS 565
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 164/372 (44%), Gaps = 49/372 (13%)
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 389
EA+ + + M ++ V+ + +F+ L+ R ++ L VE+ N +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 390 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDS 448
+ + G L A VF +M R+L SW ++ GY G+ DEA+ L+ R+L ++ D
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 449 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 508
T +L+ + L+ KEVH R + ++ V N+LIT Y KCG + AR LF +
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 509 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS-------- 560
M R + SWNAM+ Y +G E L+LF M+ ++ PD +T TS+++AC
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 561 ---------------------------HSGLVEEGLQIFRSMIRE----YTIVPGEVHYN 589
++G E ++F M R+ +T + YN
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPR 649
+ D + + Y ++ + +LSAC GD + G + K +K
Sbjct: 377 FLPD------KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR-- 428
Query: 650 NSSSYVLISNIL 661
SYV+++N L
Sbjct: 429 -LISYVIVANNL 439
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 36/253 (14%)
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
G +G ++EA+ L +Q + +D ++L++ +V+ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM- 540
+ + N+ + + + G L A Y+F +M+ER L SWN ++G YA G + E + L++ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
+G +KPD TF +L C + G ++ ++R + +V N +I + + G
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDV-VNALITMYVKCGD 246
Query: 601 LTEAYNLVKSMP-----------STHSSAALC-----------------------TLLSA 626
+ A L MP S + +C +++SA
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 627 CRLYGDTEIGEAI 639
C L GD +G I
Sbjct: 307 CELLGDRRLGRDI 319
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 316/564 (56%), Gaps = 9/564 (1%)
Query: 139 LYPN-RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 197
+ PN R LVS+L + G +G +H Y ++ G G+ + I L+DMY KC M
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGL-NLITSNYLIDMYCKCREPLM 59
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 257
A VF M V SW+ L++ ++ NG + LF +M + + P+ T + + +C
Sbjct: 60 AYKVFDSM--PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 117
Query: 258 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYN 316
L+ L G IHG+ +++G E + +LVD+YSK + +A K+F R+ ++ + +N
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKMSVS--PNVALFLNLISAVSDLRDIRLARSIHGYVL 374
M+ G++ +A++ F M + ++ P+ +L+ A S I + IHG+++
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 375 RHQY--ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 432
R + + I ++ Y KCGYL AR F++++ + ++SW+S+I GY G EA
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEA 297
Query: 433 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 492
+ LF+ LQ N +IDS L S++ + L K++ L + G E SV NS++
Sbjct: 298 MGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDM 357
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
Y KCG ++ A F +M + + SW ++ Y HG + +++F M NI+PDE+ +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
++L+ACSHSG+++EG ++F ++ + I P HY C++DLL RAG+L EA +L+ +MP
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 672
+ TLLS CR++GD E+G+ + K +L+++ +N ++YV++SN+ + G W+E +
Sbjct: 478 IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGN 537
Query: 673 IRAMTKDKELKSTPGYSLIELDKQ 696
R + K LK G S +E++++
Sbjct: 538 ARELGNIKGLKKEAGMSWVEIERE 561
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 249/491 (50%), Gaps = 14/491 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+ C G + G +VH +K + + LI +Y + + A++VFD + +++
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V+++++++ + +G + G+ + S M Q +YPN T + L A L +L++G IH
Sbjct: 73 VSWSALMSGHVLNGD--LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
G+ ++ GF + E+ +L+DMY KCG + A VF ++ ++ SWN +IA ++H G
Sbjct: 131 GFCLKIGFEMMVEV-GNSLVDMYSKCGRINEAEKVFRRI--VDRSLISWNAMIAGFVHAG 187
Query: 227 QALEAFELFRQM--IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMV 283
+A + F M + K PD TL + + +C+ + GK IHG+++R G P
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 284 ACT-ALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
T +LVDLY K + ARK F++++ K + ++ ++ GY + VEA+ +F + ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
+ + ++I +D +R + + ++ + N ++ Y KCG + A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 402 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 461
F M+ +D++SWT +ITGY HG +++ +F + R N+ D V +++L A S
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 462 GCLSAVKEVHCLTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMT-ERCLTSWN 518
G + +E+ HG + V + ++ + G+L A++L M + + W
Sbjct: 428 GMIKEGEELFSKLLET-HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQ 486
Query: 519 AMLGAYAMHGN 529
+L +HG+
Sbjct: 487 TLLSLCRVHGD 497
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 210/410 (51%), Gaps = 18/410 (4%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
LK+C L LE G ++H +K+ VG+SL+ +YS+ G++ +A +VF I ++ L
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSL 173
Query: 107 VAYTSIITAYAHSGGSCVYG--AFRIASTMQDQRLY--PNRVTLVSLLHAAAKLGSLQEG 162
+++ ++I + H+G YG A MQ+ + P+ TL SLL A + G + G
Sbjct: 174 ISWNAMIAGFVHAG----YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 163 RAIHGYAIRRGFGVCDEIFET-TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 221
+ IHG+ +R GF T +L+D+Y KCG + A F ++ T+ SW+ LI
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK--EKTMISWSSLILG 287
Query: 222 YLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
Y G+ +EA LF+++ D L++ I A+ L GK + +++ +
Sbjct: 288 YAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 347
Query: 282 MVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
++VD+Y K V +A K F ++ KD + + V++TGY K+ L +++ +F+EM++
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR-HQYITRVEIANQIIHTYAKCGYLQ 399
++ P+ +L ++SA S I+ + +L H RVE ++ + G L+
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467
Query: 400 YARLVFNRMRSRDLVS-WTSMITGYVHHGHIDEAIILFRLLQRENLRIDS 448
A+ + + M + V W ++++ HG I+ + ++L LRID+
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL----LRIDA 513
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 159/369 (43%), Gaps = 44/369 (11%)
Query: 33 NSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLN--SDCFVGSSLIRLYSEYGK 90
N K D +T LK+C + G + GK++H ++ + S + SL+ LY + G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
L A + FD+I K +++++S+I YA G A + +Q+ + L S++
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGE--FVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
A L++G+ + A++ G+ + +++DMY KCG V A F +M
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKCGLVDEAEKCFAEMQLKD- 378
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
V SW +I Y +G ++ +F +M+ + PD + + +C+ H
Sbjct: 379 -VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS-----------H 426
Query: 271 GYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 330
MI+ G E L+SK T K R+ + V+ + G LK
Sbjct: 427 SGMIKEGEE-----------LFSKLLETHGIK--PRVEHYACVVDLLGRAGRLK------ 467
Query: 331 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
H + M + PNV ++ L+S DI L + + +LR I AN ++
Sbjct: 468 --EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR---IDAKNPANYVMM 522
Query: 391 T--YAKCGY 397
+ Y + GY
Sbjct: 523 SNLYGQAGY 531
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E + + L+ +D A++ + L GK++ ++KL + V +S++
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 355
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
+Y + G +++A + F E+ KD++++T +IT Y G + RI M + P+
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG--LGKKSVRIFYEMLRHNIEPD 413
Query: 143 RVTLVSLLHAAAKLGSLQEGRAI-------HGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
V +++L A + G ++EG + HG R C ++D+ + G +
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC-------VVDLLGRAGRL 466
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIA 220
K A + M VG W L++
Sbjct: 467 KEAKHLIDTM-PIKPNVGIWQTLLS 490
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/685 (29%), Positives = 347/685 (50%), Gaps = 9/685 (1%)
Query: 16 CRRRHYGEVLRRY-LDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSD 74
C+ Y E L + KNS F + + +C + L G+++H + N D
Sbjct: 42 CKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYD 101
Query: 75 CFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
+ + ++ +Y + G L DA VFD + ++LV+YTS+IT Y+ +G A R+ M
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGA--EAIRLYLKM 159
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+ L P++ S++ A A + G+ +H I+ I + L+ MY +
Sbjct: 160 LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE-SSSHLIAQNALIAMYVRFNQ 218
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANA 253
+ A+ VF + SW+ +IA + G EA ++M+ V P+ ++
Sbjct: 219 MSDASRVFYGIPMKDLI--SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 312
+ +C+ L +G IHG I+ + + +A +L D+Y++ + AR++F+++ D
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
+NV++ G N EA++VF +M P+ +L+ A + + IH Y
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDE 431
+++ ++ + + N ++ Y C L +F R+ D VSW +++T + H E
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 491
+ LF+L+ D +T+ +LL+ ++ L +VHC + + E + N LI
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516
Query: 492 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 551
YAKCG L AR +F M R + SW+ ++ YA G E L LF MK I+P+ +T
Sbjct: 517 MYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVT 576
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
F +LTACSH GLVEEGL+++ +M E+ I P + H +C++DLL+RAG+L EA + M
Sbjct: 577 FVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM 636
Query: 612 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 671
TLLSAC+ G+ + + A+ ILK++P NS+++VL+ ++ A G W+ A
Sbjct: 637 KLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAA 696
Query: 672 HIRAMTKDKELKSTPGYSLIELDKQ 696
+R+ K ++K PG S IE++ +
Sbjct: 697 LLRSSMKKHDVKKIPGQSWIEIEDK 721
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 335/625 (53%), Gaps = 20/625 (3%)
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG----GSCVYGAFRIASTMQDQ 137
+R +++ +EDA ++FDE+ D + +I + G Y A D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 197
YP ++ + A + SL+EG+ IH I+ GF V D +L+ +Y K G
Sbjct: 131 FTYP------FVIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCNSLISLYMKLGCAWD 183
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 257
A VF +M + SWN +I+ YL G + LF++M+ PD + +A+ +C
Sbjct: 184 AEKVFEEM--PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 258 AELDYLCHGKSIHGYMIRMGVEP-DMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 315
+ + GK IH + +R +E D++ T+++D+YSK+ +V+ A ++F + ++ V +
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
NVM+ Y +N +A F +M + + + P+V +NL+ A + L R+IHGY +
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAM 357
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 434
R ++ + + +I Y +CG L+ A ++F+RM ++++SW S+I YV +G A+
Sbjct: 358 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 494
LF+ L +L DS T+ S+L A ++ LS +E+H ++ + + NSL+ YA
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 495 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 554
CG L AR F + + + SWN+++ AYA+HG + LF+ M + P++ TF S
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 555 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 614
+L ACS SG+V+EG + F SM REY I PG HY C++DL+ R G + A ++ MP
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 615 HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 674
++ +LL+A R + D I E A+QI K+E N+ YVL+ N+ AE GRW++V I+
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 675 AMTKDKELKSTPGYSLIELDKQREV 699
+ + K + T S +E + V
Sbjct: 658 LLMESKGISRTSSRSTVEAKGKSHV 682
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 232/444 (52%), Gaps = 10/444 (2%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y E ++ Y + + D +KS + LE GK++H IKL SD +V +S
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNS 170
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
LI LY + G DA +VF+E+ +D+V++ S+I+ Y G + + + M
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDG--FSSLMLFKEMLKCGFK 228
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+R + +S L A + + S + G+ IH +A+R D + T++LDMY K G V A
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAE 259
+F M + +WN +I Y NG+ +AF F++M + L PD++T N + + A
Sbjct: 289 IFNGM--IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI 346
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVM 318
L+ G++IHGY +R G P MV TAL+D+Y + K A +F+R+ K+ + +N +
Sbjct: 347 LE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSI 402
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
+ Y++N A+ +F E+ S+ P+ +++ A ++ + R IH Y+++ +Y
Sbjct: 403 IAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY 462
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 438
+ I N ++H YA CG L+ AR FN + +D+VSW S+I Y HG ++ LF
Sbjct: 463 WSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSE 522
Query: 439 LQRENLRIDSVTLISLLQALSQLG 462
+ + + T SLL A S G
Sbjct: 523 MIASRVNPNKSTFASLLAACSISG 546
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 316/586 (53%), Gaps = 45/586 (7%)
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFETTLLDMYHKCGGVKMAAAVF 202
+SLLH L SL R IH I+ G ++ E +L + + G+ A +VF
Sbjct: 37 LSLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVF 91
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
+ + + WN + + + + A +L+ MI +LP+ T + SCA+
Sbjct: 92 KTIQEPNLLI--WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD---------------- 296
G+ IHG+++++G + D+ T+L+ +Y + FD
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 297 ------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 350
+ A+K+F+ + KD V +N M++GY + EA+ +F +M+K +V P+ +
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 410
+ ++SA + I L R +H ++ H + + ++I N +I Y+KCG L+ A +F R+
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
+D++SW ++I GY H EA++LF+ + R + VT++S+L A + LG + + +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 471 HCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 528
H + G S+ SLI YAKCG + A +F + + L+SWNAM+ +AMHG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 529 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 588
LF+ M+ I+PD++TF +L+ACSHSG+++ G IFR+M ++Y + P HY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 589 NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEP 648
C+IDLL +G EA ++ M C+LL AC+++G+ E+GE+ A+ ++K+EP
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569
Query: 649 RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
N SYVL+SNI A GRW+EVA RA+ DK +K PG S IE+D
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/605 (26%), Positives = 266/605 (43%), Gaps = 102/605 (16%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIR---LYSEYGKLEDAHRVFDEITN 103
L +C L L +H IK+ L++ + S LI L + L A VF I
Sbjct: 40 LHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 104 KDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGR 163
+L+ + ++ +A S S A ++ M L PN T +L + AK + +EG+
Sbjct: 97 PNLLIWNTMFRGHALS--SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 164 AIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK---MNATSTT--------- 211
IHG+ ++ G + D T+L+ MY + G ++ A VF K + S T
Sbjct: 155 QIHGHVLKLGCDL-DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 212 -----------------VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
V SWN +I+ Y G EA ELF+ M+ V PD T+ +
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
+CA+ + G+ +H ++ G ++ AL+DLYSK ++ A +FERL KD +
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+N ++ GY +L EA+ +F EM++ +PN L+++ A + L I + R IH Y+
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 374 -LRHQYITRV-EIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
R + +T + +I YAKCG ++ A VFN + + L SW +MI G+ HG D
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 491
+ LF +++ ++ D +T + LL A S
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSH------------------------------- 482
Query: 492 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG---NYAEVLKLFNHMKL------ 542
G L++ R++F+ MT+ Y M +Y ++ L H L
Sbjct: 483 ----SGMLDLGRHIFRTMTQD-----------YKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 543 ----GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
++PD + + S+L AC G VE G ++I+ PG Y + ++ + A
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS--YVLLSNIYASA 585
Query: 599 GQLTE 603
G+ E
Sbjct: 586 GRWNE 590
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 6/274 (2%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
+Y E L + D+ + D S + + +C G +E G++VH+ S+ + +
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 305
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
+LI LYS+ G+LE A +F+ + KD++++ ++I Y H + A + M
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM--NLYKEALLLFQEMLRSGE 363
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD-EIFETTLLDMYHKCGGVKMA 198
PN VT++S+L A A LG++ GR IH Y +R GV + T+L+DMY KCG ++ A
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
VF + ++ SWN +I + +G+A +F+LF +M + PD +T + +C+
Sbjct: 424 HQVFNSI--LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 259 ELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDL 291
L G+ I M + + P + ++DL
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 322/620 (51%), Gaps = 8/620 (1%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
S+L Y+ G + A ++F+E+ L++Y +I Y G + I + +
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
P+ T + AA +L S++ G +HG +R FG D+ + LL MY G V+MA
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR-DKYVQNALLAMYMNFGKVEMA 171
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
VF M + V SWN +I+ Y NG +A +F M++ V D T+ + + C
Sbjct: 172 RDVFDVMK--NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNV 317
L L G+++H + + + ALV++Y K + +AR +F+R+ +D + +
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTC 289
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
M+ GY ++ A+ + M V PN +L+S D + + +HG+ +R Q
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
+ + I +I YAKC + VF+ W+++I G V + + +A+ LF+
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 497
++RE++ + TL SLL A + L L +HC + L L+ Y+KCG
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 498 KLNMARYLFQQMTERCLTS----WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
L A +F + E+ + W A++ Y MHG+ L++F M + P+E+TFT
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT 529
Query: 554 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 613
S L ACSHSGLVEEGL +FR M+ Y + HY CI+DLL RAG+L EAYNL+ ++P
Sbjct: 530 SALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPF 589
Query: 614 THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHI 673
+S LL+AC + + ++GE A ++ +LEP N+ +YVL++NI A GRW ++ +
Sbjct: 590 EPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKV 649
Query: 674 RAMTKDKELKSTPGYSLIEL 693
R+M ++ L+ PG+S IE+
Sbjct: 650 RSMMENVGLRKKPGHSTIEI 669
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 250/491 (50%), Gaps = 16/491 (3%)
Query: 48 KSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLV 107
K+ L ++ G VH ++ D +V ++L+ +Y +GK+E A VFD + N+D++
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 108 AYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHG 167
++ ++I+ Y +G + A + M ++ + + T+VS+L L L+ GR +H
Sbjct: 185 SWNTMISGYYRNG--YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 168 YAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 227
+ G E+ + L++MY KCG + A VF +M V +W +I Y +G
Sbjct: 243 LVEEKRLGDKIEV-KNALVNMYLKCGRMDEARFVFDRMERRD--VITWTCMINGYTEDGD 299
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
A EL R M V P+ +T+A+ + C + + GK +HG+ +R V D++ T+
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359
Query: 288 LVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 346
L+ +Y+K V ++F ++ ++ G ++N+L +A+ +F M + V PN
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Query: 347 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 406
+A +L+ A + L D+R A +IH Y+ + +++ ++ A ++H Y+KCG L+ A +FN
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 407 ----RMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
+ +S+D+V W ++I+GY HG A+ +F + R + + +T S L A S G
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSG 539
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNN---SLITTYAKCGKLNMARYLFQQMT-ERCLTSWN 518
+ + + + H K L+ +N ++ + G+L+ A L + E T W
Sbjct: 540 LVE--EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 597
Query: 519 AMLGAYAMHGN 529
A+L A H N
Sbjct: 598 ALLAACVTHEN 608
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 182/365 (49%), Gaps = 10/365 (2%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
R + + L + + N LD + I L C L LE G+ VH + L
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
V ++L+ +Y + G++++A VFD + +D++ +T +I Y G V A + MQ
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD--VENALELCRLMQF 312
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
+ + PN VT+ SL+ + +G+ +HG+A+R+ D I ET+L+ MY KC V
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV-YSDIIIETSLISMYAKCKRVD 371
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
+ VF A+ G W+ +IA + N +A LF++M V P++ TL + + +
Sbjct: 372 LCFRVFS--GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMF----ERLRNKD 311
A L L +IH Y+ + G + A T LV +YSK + A K+F E+ ++KD
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
V++ +++GY + A+ VF EM++ V+PN F + ++A S + ++
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 372 YVLRH 376
++L H
Sbjct: 550 FMLEH 554
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 219/687 (31%), Positives = 357/687 (51%), Gaps = 50/687 (7%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED---AHRVFDEITN 103
LK+C + L K H K L++D + L+ E G E A VF+ +
Sbjct: 39 LKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 104 -KDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
Y S+I YA SG A + M + + P++ T L A AK + G
Sbjct: 96 YGTCFMYNSLIRGYASSG--LCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 222
IHG ++ G+ D + +L+ Y +CG + A VF +M + V SW +I Y
Sbjct: 154 IQIHGLIVKMGYAK-DLFVQNSLVHFYAECGELDSARKVFDEM--SERNVVSWTSMICGY 210
Query: 223 LHNGQALEAFELFRQMIH-RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
A +A +LF +M+ +V P+ +T+ I +CA+L+ L G+ ++ ++ G+E +
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 282 MVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
+ +ALVD+Y K + + A+++F+ + + N M + Y++ L EA+ VF+ M+
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
V P+ L+ IS+ S LR+I +S HGYVLR+ + + I N +I Y KC
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHID------------------------------ 430
A +F+RM ++ +V+W S++ GYV +G +D
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 431 -EAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV--N 486
EAI +F +Q +E + D VT++S+ A LG L K ++ Y +G +L V
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY--YYIEKNGIQLDVRLG 508
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
+L+ +++CG A +F +T R +++W A +GA AM GN ++LF+ M +K
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
PD + F LTACSH GLV++G +IF SM++ + + P +VHY C++DLL RAG L EA
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 607 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 666
L++ MP + +LL+ACR+ G+ E+ A++I L P + SYVL+SN+ A GR
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 667 WDEVAHIRAMTKDKELKSTPGYSLIEL 693
W+++A +R K+K L+ PG S I++
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 263/545 (48%), Gaps = 45/545 (8%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E + +L + NS S D L +C G ++H +K+ D FV +SL+
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS--GGSCVYGAFRIASTMQDQRLY 140
Y+E G+L+ A +VFDE++ +++V++TS+I YA V FR+ ++D+ +
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM---VRDEEVT 233
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
PN VT+V ++ A AKL L+ G ++ + G V D + + L+DMY KC + +A
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND-LMVSALVDMYMKCNAIDVAKR 292
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
+F + A++ + N + + Y+ G EA +F M+ V PD +++ +AI SC++L
Sbjct: 293 LFDEYGASNLDL--CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD-------------- 296
+ GKS HGY++R G E C AL+D+Y K FD
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 297 --------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNV 347
V A + FE + K+ V +N +++G ++ L EAI VF M + V+ +
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 348 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 407
+++ SA L + LA+ I+ Y+ ++ V + ++ +++CG + A +FN
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 530
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
+ +RD+ +WT+ I G+ + AI LF + + L+ D V + L A S G +
Sbjct: 531 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 590
Query: 468 KEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAY 524
KE+ + HG E ++ + G L A L + M E WN++L A
Sbjct: 591 KEIF-YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 525 AMHGN 529
+ GN
Sbjct: 650 RVQGN 654
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 210/650 (32%), Positives = 347/650 (53%), Gaps = 17/650 (2%)
Query: 59 GKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH 118
G+ VH I+ ++ + L+ Y++ GKL AH +F+ I KD+V++ S+IT Y+
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 119 SGG-SCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR-RGFGV 176
+GG S Y ++ M+ Q + PN TL + A + L S GR H ++ FG
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG- 151
Query: 177 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
D +T+L+ MY K G V+ VF M +T +W+ +++ Y G+ EA ++F
Sbjct: 152 -DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY--TWSTMVSGYATRGRVEEAIKVFN 208
Query: 237 QMIHRKVL-PDLLTLANAILSC-AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
+ K D + A+LS A Y+ G+ IH I+ G+ + ALV +YSK
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 295 FD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
+ + +A KMF+ +++++ ++ M+TGY +N +EA+ +F M + P+ + +
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
++A SD+ + + +H ++L+ + + ++ YAK G L AR F+ ++ RD+
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
WTS+I+GYV + +EA+IL+R ++ + + T+ S+L+A S L L K+VH
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
T + G E+ + ++L T Y+KCG L +F++ + + SWNAM+ + +G E
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
L+LF M ++PD++TF +I++ACSH G VE G F M + + P HY C++D
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVD 568
Query: 594 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 653
LLSRAGQL EA ++S H LLSAC+ +G E+G ++++ L R SS+
Sbjct: 569 LLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESST 628
Query: 654 YVLISNILAEGGRWDEV----AHIRAMTKDKELKSTPGYSLIELDKQREV 699
YV +S I GR +V H+RA KE+ G S IEL Q V
Sbjct: 629 YVQLSGIYTALGRMRDVERVWKHMRANGVSKEV----GCSWIELKNQYHV 674
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 266/581 (45%), Gaps = 49/581 (8%)
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
ST Q + L P+ TL+ L ++ +L GRA+HG IR G C + L++ Y K
Sbjct: 4 STFQTE-LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQ-HANVLVNFYAK 61
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF---ELFRQMIHRKVLPDLL 248
CG + A ++F + V SWN LI Y NG ++ +LFR+M + +LP+
Sbjct: 62 CGKLAKAHSIFNAI--ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERL 307
TLA + + L G+ H +++M D+ T+LV +Y K V K+F +
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDIRL 365
++ ++ M++GY EAI VF+ + K S + +F ++S+++ + L
Sbjct: 180 PERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 425
R IH +++ + V ++N ++ Y+KC L A +F+ R+ ++W++M+TGY
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 426 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
+G EA+ LF + ++ T++ +L A S + L K++H + + L
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
+L+ YAK G L AR F + ER + W +++ Y + + E L L+ MK I
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 546 KPDELTFTSILTACSHSGLVEEGLQIFRSMIRE--------------------------- 578
P++ T S+L ACS +E G Q+ I+
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 579 -YTIVPGE--VHYNCIIDLLSRAGQLTEAYNLVKSMPS---THSSAALCTLLSACRLYGD 632
+ P + V +N +I LS GQ EA L + M + ++SAC G
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 633 TEIG----EAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 669
E G ++ QI L+P+ Y + ++L+ G+ E
Sbjct: 540 VERGWFYFNMMSDQI-GLDPK-VDHYACMVDLLSRAGQLKE 578
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 170/318 (53%), Gaps = 8/318 (2%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT 102
T L S A + G+++H +IK L + ++L+ +YS+ L +A ++FD
Sbjct: 224 FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG 283
Query: 103 NKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
+++ + +++++T Y+ +G S A ++ S M + P+ T+V +L+A + + L+EG
Sbjct: 284 DRNSITWSAMVTGYSQNGES--LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG 341
Query: 163 RAIHGYAIRRGFGVCDEIFETT-LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 221
+ +H + ++ GF +F TT L+DMY K G + A F + V W LI+
Sbjct: 342 KQLHSFLLKLGFE--RHLFATTALVDMYAKAGCLADARKGFDCLQERD--VALWTSLISG 397
Query: 222 YLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
Y+ N EA L+R+M ++P+ T+A+ + +C+ L L GK +HG+ I+ G +
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 282 MVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
+ +AL +YSK + +F R NKD V +N M++G N EA+ +F EM+
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 341 MSVSPNVALFLNLISAVS 358
+ P+ F+N+ISA S
Sbjct: 518 EGMEPDDVTFVNIISACS 535
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 6/266 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L +C + LE GK++H +KL F ++L+ +Y++ G L DA + FD + +D+
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+TS+I+ Y + + A + M+ + PN T+ S+L A + L +L+ G+ +H
Sbjct: 389 ALWTSLISGYVQNSDN--EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
G+ I+ GFG+ + + L MY KCG ++ VF + + V SWN +I+ HNG
Sbjct: 447 GHTIKHGFGL-EVPIGSALSTMYSKCGSLEDGNLVFRR--TPNKDVVSWNAMISGLSHNG 503
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVAC 285
Q EA ELF +M+ + PD +T N I +C+ ++ G M ++G++P +
Sbjct: 504 QGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY 563
Query: 286 TALVDLYSKFDVTKARKMFERLRNKD 311
+VDL S+ K K F N D
Sbjct: 564 ACMVDLLSRAGQLKEAKEFIESANID 589
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L Y +K + + + LK+C +L LE GK+VH +IK + +GS+L
Sbjct: 406 EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
+YS+ G LED + VF NKD+V++ ++I+ +H+G A + M + + P+
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG--DEALELFEEMLAEGMEPD 523
Query: 143 RVTLVSLLHAAAKLGSLQEG 162
VT V+++ A + G ++ G
Sbjct: 524 DVTFVNIISACSHKGFVERG 543
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 219/687 (31%), Positives = 357/687 (51%), Gaps = 50/687 (7%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED---AHRVFDEITN 103
LK+C + L K H K L++D + L+ E G E A VF+ +
Sbjct: 39 LKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 104 -KDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
Y S+I YA SG A + M + + P++ T L A AK + G
Sbjct: 96 YGTCFMYNSLIRGYASSG--LCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 222
IHG ++ G+ D + +L+ Y +CG + A VF +M + V SW +I Y
Sbjct: 154 IQIHGLIVKMGYAK-DLFVQNSLVHFYAECGELDSARKVFDEM--SERNVVSWTSMICGY 210
Query: 223 LHNGQALEAFELFRQMIH-RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
A +A +LF +M+ +V P+ +T+ I +CA+L+ L G+ ++ ++ G+E +
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 282 MVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
+ +ALVD+Y K + + A+++F+ + + N M + Y++ L EA+ VF+ M+
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
V P+ L+ IS+ S LR+I +S HGYVLR+ + + I N +I Y KC
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHID------------------------------ 430
A +F+RM ++ +V+W S++ GYV +G +D
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 431 -EAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV--N 486
EAI +F +Q +E + D VT++S+ A LG L K ++ Y +G +L V
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY--YYIEKNGIQLDVRLG 508
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
+L+ +++CG A +F +T R +++W A +GA AM GN ++LF+ M +K
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
PD + F LTACSH GLV++G +IF SM++ + + P +VHY C++DLL RAG L EA
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 607 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 666
L++ MP + +LL+ACR+ G+ E+ A++I L P + SYVL+SN+ A GR
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 667 WDEVAHIRAMTKDKELKSTPGYSLIEL 693
W+++A +R K+K L+ PG S I++
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 263/545 (48%), Gaps = 45/545 (8%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E + +L + NS S D L +C G ++H +K+ D FV +SL+
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS--GGSCVYGAFRIASTMQDQRLY 140
Y+E G+L+ A +VFDE++ +++V++TS+I YA V FR+ ++D+ +
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM---VRDEEVT 233
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
PN VT+V ++ A AKL L+ G ++ + G V D + + L+DMY KC + +A
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND-LMVSALVDMYMKCNAIDVAKR 292
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
+F + A++ + N + + Y+ G EA +F M+ V PD +++ +AI SC++L
Sbjct: 293 LFDEYGASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD-------------- 296
+ GKS HGY++R G E C AL+D+Y K FD
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 297 --------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNV 347
V A + FE + K+ V +N +++G ++ L EAI VF M + V+ +
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 348 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 407
+++ SA L + LA+ I+ Y+ ++ V + ++ +++CG + A +FN
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 530
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
+ +RD+ +WT+ I G+ + AI LF + + L+ D V + L A S G +
Sbjct: 531 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 590
Query: 468 KEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAY 524
KE+ + HG E ++ + G L A L + M E WN++L A
Sbjct: 591 KEIF-YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 525 AMHGN 529
+ GN
Sbjct: 650 RVQGN 654
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 206/635 (32%), Positives = 334/635 (52%), Gaps = 12/635 (1%)
Query: 68 KLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA-HSGGSCVYG 126
K L +D FVGS L+ +++ G L A +VF+++ ++ V ++ G
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 127 AFRIASTMQDQRLYPNRVTLVSLL-HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
F ++M D + L S ++ A+ L++GR +HG+ I G L
Sbjct: 296 LFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
++MY KCG + A VF M + SWN +I NG +EA E ++ M +LP
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSV--SWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMF 304
TL +++ SCA L + G+ IHG +++G++ ++ AL+ LY++ + + RK+F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 305 ERLRNKDAVIYNVMMTGYLKND--LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
+ D V +N ++ +++ LP EA+ F + N F +++SAVS L
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSRDLVSWTSMIT 421
L + IHG L++ N +I Y KCG + +F+RM RD V+W SMI+
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
GY+H+ + +A+ L + + R+DS ++L A + + L EVH + RA
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
++ V ++L+ Y+KCG+L+ A F M R SWN+M+ YA HG E LKLF MK
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 542 L-GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
L G PD +TF +L+ACSH+GL+EEG + F SM Y + P H++C+ D+L RAG+
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 601 LTEAYNLVKSMPSTHSSAALCTLLSA-CRLYG-DTEIGEAIAKQILKLEPRNSSSYVLIS 658
L + + ++ MP + T+L A CR G E+G+ A+ + +LEP N+ +YVL+
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 832
Query: 659 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
N+ A GGRW+++ R KD ++K GYS + +
Sbjct: 833 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 867
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/593 (27%), Positives = 283/593 (47%), Gaps = 22/593 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
++SCV G + H K L+ D ++ ++LI Y E G A +VFDE+ ++
Sbjct: 10 VQSCV--GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQ--EGRA 164
V++ I++ Y+ +G A M + ++ N+ VS+L A ++GS+ GR
Sbjct: 68 VSWACIVSGYSRNGEH--KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKC-GGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
IHG + + V D + L+ MY KC G V A FG + ++ SWN +I+ Y
Sbjct: 126 IHGLMFKLSYAV-DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSV--SWNSIISVYS 182
Query: 224 HNGQALEAFELFRQMIHRKVLPDLLTLANAIL---SCAELDYLCHGKSIHGYMIRMGVEP 280
G AF +F M + P T + + S E D + I + + G+
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLL-EQIMCTIQKSGLLT 241
Query: 281 DMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
D+ + LV ++K ++ ARK+F ++ ++AV N +M G ++ EA +F +M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 340 KM-SVSP-NVALFLNLISAVSDLRDIRL--ARSIHGYVLRHQYIT-RVEIANQIIHTYAK 394
M VSP + + L+ S ++ L R +HG+V+ + V I N +++ YAK
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 395 CGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISL 454
CG + AR VF M +D VSW SMITG +G EA+ ++ ++R ++ S TLIS
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 455 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL 514
L + + L +++H + + +SV+N+L+T YA+ G LN R +F M E
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 515 TSWNAMLGAYAM-HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
SWN+++GA A + E + F + + K + +TF+S+L+A S E G QI
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-H 540
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
+ + I N +I + G++ + M + +++S
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 169/345 (48%), Gaps = 19/345 (5%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E + RY ++ + L SC +L + G+++H +S+KL ++ + V ++L+
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 457
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGS------CVYGAFRIASTMQD 136
LY+E G L + ++F + D V++ SII A A S S C A R
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG----- 512
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE-IFETTLLDMYHKCGGV 195
Q+L NR+T S+L A + L + G+ IHG A++ + DE E L+ Y KCG +
Sbjct: 513 QKL--NRITFSSVLSAVSSLSFGELGKQIHGLALKN--NIADEATTENALIACYGKCGEM 568
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+F +M V +WN +I+ Y+HN +A +L M+ D A +
Sbjct: 569 DGCEKIFSRMAERRDNV-TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 627
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 314
+ A + L G +H +R +E D+V +ALVD+YSK + A + F + +++
Sbjct: 628 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 687
Query: 315 YNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVS 358
+N M++GY ++ EA+ +F M + P+ F+ ++SA S
Sbjct: 688 WNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS 732
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 19/267 (7%)
Query: 57 EFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITN-KDLVAYTSIITA 115
E GK++H ++K N+ + ++LI Y + G+++ ++F + +D V + S+I+
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 116 YAHSGGSCVYGAFRIASTM--QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG 173
Y H+ + A + M QRL + ++L A A + +L+ G +H ++R
Sbjct: 594 YIHN--ELLAKALDLVWFMLQTGQRL--DSFMYATVLSAFASVATLERGMEVHACSVR-- 647
Query: 174 FGVC---DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALE 230
C D + + L+DMY KCG + A F M ++ SWN +I+ Y +GQ E
Sbjct: 648 --ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY--SWNSMISGYARHGQGEE 703
Query: 231 AFELFRQM-IHRKVLPDLLTLANAILSCAELDYLCHG-KSIHGYMIRMGVEPDMVACTAL 288
A +LF M + + PD +T + +C+ L G K G+ P + + +
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 763
Query: 289 VDLYSKF-DVTKARKMFERLRNKDAVI 314
D+ + ++ K E++ K V+
Sbjct: 764 ADVLGRAGELDKLEDFIEKMPMKPNVL 790
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 342/627 (54%), Gaps = 27/627 (4%)
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG----GSCVYGAFRIA 131
F G+S+ Y + G L R FD + ++D V++ I+ G G + R+
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
PN TLV ++HA L +G IHGY IR GF + + ++L MY
Sbjct: 122 G------FEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSV-QNSILCMYAD 172
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTL 250
+ A +F +M + V SW+ +I +Y+ + + + +LF++M+H K PD +T+
Sbjct: 173 SDSLS-ARKLFDEM--SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 229
Query: 251 ANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACTALVDLYSK-FDVTKARKMFERLR 308
+ + +C ++ + G+S+HG+ IR G + D+ C +L+D+YSK FDV A ++F+
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 368
++ V +N ++ G++ N EA+ +FH M++ +V + ++L+ +S
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 428
IHG ++R Y + + +I Y C + A V + M +D+VS ++MI+G H G
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNN 487
DEAI +F ++ +++T+ISLL A S L K H + R + ++SV
Sbjct: 410 SDEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGT 466
Query: 488 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
S++ YAKCG + MAR F Q+TE+ + SW ++ AYA++G + L LF+ MK P
Sbjct: 467 SIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTP 526
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 607
+ +T+ + L+AC+H GLV++GL IF+SM+ E P HY+CI+D+LSRAG++ A L
Sbjct: 527 NAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVEL 585
Query: 608 VKSMPS--THSSAALCTLLSACR-LYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEG 664
+K++P ++A +LS CR + I + ++L+LEP SS Y+L S+ A
Sbjct: 586 IKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAE 645
Query: 665 GRWDEVAHIRAMTKDKELKSTPGYSLI 691
W++VA +R + K+++++ GYS++
Sbjct: 646 KSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 171/326 (52%), Gaps = 11/326 (3%)
Query: 34 SKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLN-SDCFVGSSLIRLYSEYGKLE 92
+K DC +T LK+C + ++ G+ VH SI+ + +D FV +SLI +YS+ ++
Sbjct: 220 AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVD 279
Query: 93 DAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
A RVFDE T +++V++ SI+ + H+ A + M + + + VT+VSLL
Sbjct: 280 SAFRVFDETTCRNIVSWNSILAGFVHNQR--YDEALEMFHLMVQEAVEVDEVTVVSLLRV 337
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 212
++IHG IRRG+ +E+ ++L+D Y C V A V M T V
Sbjct: 338 CKFFEQPLPCKSIHGVIIRRGYE-SNEVALSSLIDAYTSCSLVDDAGTVLDSM--TYKDV 394
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY 272
S + +I+ H G++ EA +F H + P+ +T+ + + +C+ L K HG
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIF---CHMRDTPNAITVISLLNACSVSADLRTSKWAHGI 451
Query: 273 MIRMGVE-PDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 330
IR + D+ T++VD Y+K + AR+ F+++ K+ + + V+++ Y N LP +
Sbjct: 452 AIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDK 511
Query: 331 AINVFHEMIKMSVSPNVALFLNLISA 356
A+ +F EM + +PN +L +SA
Sbjct: 512 ALALFDEMKQKGYTPNAVTYLAALSA 537
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLN-SDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD 105
L +C L K H +I+ +L +D VG+S++ Y++ G +E A R FD+IT K+
Sbjct: 433 LNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKN 492
Query: 106 LVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
++++T II+AYA +G A + M+ + PN VT ++ L A G +++G I
Sbjct: 493 IISWTVIISAYAING--LPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMI 550
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 205/687 (29%), Positives = 367/687 (53%), Gaps = 21/687 (3%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITL--CLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
E L Y +K + +C A T LK+C L+ GK VH I+ NS V +S
Sbjct: 88 EALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNS 147
Query: 81 LIRLYSEYGKLED------AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
L+ +Y D +VFD + K++VA+ ++I+ Y +G + A R M
Sbjct: 148 LMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNA--EACRQFGIM 205
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCG 193
+ P+ V+ V++ A + S+++ +G ++ G ++F ++ + MY + G
Sbjct: 206 MRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELG 265
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLAN 252
++ + VF + + WN +I Y+ N +E+ ELF + I ++++ D +T
Sbjct: 266 DIESSRRVFD--SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLL 323
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 311
A + + L + G+ HG++ + E +V +L+ +YS+ V K+ +F +R +D
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERD 383
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
V +N M++ +++N L E + + +EM K + L+SA S+LR+ + + H
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF--NRMRSRDLVSWTSMITGYVHHGHI 429
+++R Q I + + +I Y+K G ++ ++ +F + RD +W SMI+GY +GH
Sbjct: 444 FLIR-QGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 489
++ ++FR + +N+R ++VT+ S+L A SQ+G + K++H + R + + + V ++L
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASAL 562
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 549
+ Y+K G + A +F Q ER ++ M+ Y HG + LF M+ IKPD
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 609
+TF ++L+ACS+SGL++EGL+IF M Y I P HY CI D+L R G++ EAY VK
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 610 SMPSTHSSAALC-TLLSACRLYGDTEIGEAIAKQILKLEP-RNSSSY-VLISNILAEGGR 666
+ + A L +LL +C+L+G+ E+ E +++++ K + +N S Y VL+SN+ AE +
Sbjct: 683 GLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQK 742
Query: 667 WDEVAHIRAMTKDKELKSTPGYSLIEL 693
W V +R ++K LK G S IE+
Sbjct: 743 WKSVDKVRRGMREKGLKKEVGRSGIEI 769
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 165/324 (50%), Gaps = 14/324 (4%)
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL--NLISAV 357
AR++F+ + V++N ++ G++ N+LP EA+ + M K + N + + + A
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 358 SDLRDIRLARSIHGYVLR-HQYITRVEIANQIIHTYAKC----GYLQY--ARLVFNRMRS 410
++ ++++ +++H +++R Q +RV + N +++ Y C +Y R VF+ MR
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
+++V+W ++I+ YV G EA F ++ R ++ V+ +++ A+S +
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 471 HCLTYR--AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 528
+ L + + K+L V +S I+ YA+ G + +R +F ER + WN M+G Y +
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 529 NYAEVLKLF-NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 587
E ++LF + I DE+T+ +A S VE G Q + + + +P V
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP-IVI 355
Query: 588 YNCIIDLLSRAGQLTEAYNLVKSM 611
N ++ + SR G + +++ + SM
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSM 379
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 396 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN--LRIDSVTLIS 453
G Q AR +F+ + V W ++I G++ + EA++ + +++ D+ T S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY------AKCGKLNMARYLFQ 507
L+A ++ L A K VHC R V+NSL+ Y C + ++ R +F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 508 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 562
M + + +WN ++ Y G AE + F M +KP ++F ++ A S S
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 203/656 (30%), Positives = 342/656 (52%), Gaps = 14/656 (2%)
Query: 46 CLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT-NK 104
C S +L R+ K VH + L L D + SLI +Y A VF+
Sbjct: 13 CTNSTKSLRRI---KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS 69
Query: 105 DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL-YPNRVTLVSLLHAAAKLGSLQEGR 163
D+ + S+++ Y S S + + + + + P+ T +++ A LG GR
Sbjct: 70 DVYIWNSLMSGY--SKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 164 AIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
IH ++ G+ VCD + ++L+ MY K + + VF +M V SWN +I+ +
Sbjct: 128 MIHTLVVKSGY-VCDVVVASSLVGMYAKFNLFENSLQVFDEM--PERDVASWNTVISCFY 184
Query: 224 HNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV 283
+G+A +A ELF +M P+ ++L AI +C+ L +L GK IH ++ G E D
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 284 ACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
+ALVD+Y K D + AR++F+++ K V +N M+ GY+ + + + MI
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
P+ +++ A S R++ + IHGYV+R + + +I Y KCG A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
VF++ + SW MI+ Y+ G+ +A+ ++ + ++ D VT S+L A SQL
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 463 CLSAVKEVH-CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAML 521
L K++H ++ EL ++ +L+ Y+KCG A +F + ++ + SW M+
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLS-ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 522 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 581
AY HG E L F+ M+ +KPD +T ++L+AC H+GL++EGL+ F M +Y I
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 582 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA-LCTLLSACRLYGDTEIGEAIA 640
P HY+C+ID+L RAG+L EAY +++ P T +A L TL SAC L+ + +G+ IA
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIA 603
Query: 641 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+ +++ P ++S+Y+++ N+ A G WD +R K+ L+ PG S IE+ +
Sbjct: 604 RLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D T L +C L LE GK++H+ + L +D + S+L+ +YS+ G ++A R+F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
+ I KD+V++T +I+AY G A MQ L P+ VTL+++L A G
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQP--REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGL 526
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFE--TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 216
+ EG +R +G+ + I E + ++D+ + G + A + + TS +
Sbjct: 527 IDEGLKFFS-QMRSKYGI-EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS 584
Query: 217 PLIAA 221
L +A
Sbjct: 585 TLFSA 589
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 324/608 (53%), Gaps = 8/608 (1%)
Query: 93 DAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
DA ++F E+T + L + +++ + + + + +D+ P+ TL L A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREK-QWEEVLYHFSHMFRDEE-KPDNFTLPVALKA 69
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 212
+L + G IHG+ + D ++L+ MY KCG + A +F ++ +
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD--I 127
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
+W+ +++ + NG +A E FR+M+ V PD +TL + +C +L G+ +HG
Sbjct: 128 VTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHG 187
Query: 272 YMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 330
++IR G D+ +L++ Y+K K A +F+ + KD + ++ ++ Y++N E
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 331 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
A+ VF++M+ PNVA L ++ A + D+ R H +R T V+++ ++
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 391 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSV 449
Y KC + A VF+R+ +D+VSW ++I+G+ +G +I F ++ EN R D++
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 450 TLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 509
++ +L + S+LG L K H + + SL+ Y++CG L A +F +
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 510 TERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEG 568
+ W +++ Y +HG + L+ FNHM K +KP+E+TF SIL+ACSH+GL+ EG
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 569 LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACR 628
L+IF+ M+ +Y + P HY ++DLL R G L A + K MP + + L TLL ACR
Sbjct: 488 LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACR 547
Query: 629 LYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGY 688
++ + E+ E +AK++ +LE ++ Y+L+SN+ G W+ V +R K + +K
Sbjct: 548 IHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAE 607
Query: 689 SLIELDKQ 696
SLIE+ ++
Sbjct: 608 SLIEIRRK 615
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 244/453 (53%), Gaps = 10/453 (2%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIK-LNLNSDC 75
R + + EVL + + + D + + LK+C L + +G+ +H K + L SD
Sbjct: 37 REKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDL 96
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM- 134
+VGSSLI +Y + G++ +A R+FDE+ D+V ++S+++ + +G Y A M
Sbjct: 97 YVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP--YQAVEFFRRMV 154
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+ P+RVTL++L+ A KL + + GR +HG+ IRRGF D +LL+ Y K
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS-NDLSLVNSLLNCYAKSRA 213
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
K A +F KM A + SW+ +IA Y+ NG A EA +F M+ P++ T+ +
Sbjct: 214 FKEAVNLF-KMIAEKDVI-SWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVL 271
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAV 313
+CA L G+ H IR G+E ++ TALVD+Y K F +A +F R+ KD V
Sbjct: 272 QACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV 331
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
+ +++G+ N + +I F M ++ + P+ L + ++ + S+L + A+ H Y
Sbjct: 332 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 432
V+++ + + I ++ Y++CG L A VFN + +D V WTS+ITGY HG +A
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKA 451
Query: 433 IILFR-LLQRENLRIDSVTLISLLQALSQLGCL 464
+ F +++ ++ + VT +S+L A S G +
Sbjct: 452 LETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 144/290 (49%), Gaps = 9/290 (3%)
Query: 22 GEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSL 81
E L + D+ + + + + L++C A LE G++ H +I+ L ++ V ++L
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLY 140
+ +Y + E+A+ VF I KD+V++ ++I+ + +G F I + R
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR-- 363
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ + +V +L + ++LG L++ + H Y I+ GF + +L+++Y +CG + A+
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD-SNPFIGASLVELYSRCGSLGNASK 422
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLANAILSCAE 259
VF + T V W LI Y +G+ +A E F M+ +V P+ +T + + +C+
Sbjct: 423 VFNGIALKDTVV--WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 260 LDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKF-DVTKARKMFERL 307
+ G I M+ + P++ LVDL + D+ A ++ +R+
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L SC LG LE K H IK +S+ F+G+SL+ LYS G L +A +VF+ I KD
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 107 VAYTSIITAYA-HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
V +TS+IT Y H G+ F ++ + PN VT +S+L A + G + EG I
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFN--HMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 166 HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH- 224
+ + L+D+ + G + A + +M + T L A +H
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQ 550
Query: 225 NGQALE 230
NG+ E
Sbjct: 551 NGEMAE 556
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 344/647 (53%), Gaps = 23/647 (3%)
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG 121
H +IK SD +V + ++ Y ++G L A+ +FDE+ +D V++ ++I+ Y G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 122 SCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF 181
+ A+ + + M+ + + LL A + G +HG I+ G+ C+
Sbjct: 82 --LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE-CNVYV 138
Query: 182 ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM--- 238
++L+DMY KC V+ A F +++ ++ SWN LIA ++ AF L M
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSV--SWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 239 ----IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
+ LLTL + + C L K +H ++++G++ ++ C A++ Y+
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLL------KQVHAKVLKLGLQHEITICNAMISSYAD 250
Query: 295 F-DVTKARKMFERLR-NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
V+ A+++F+ L +KD + +N M+ G+ K++L A +F +M + V ++ +
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK--CGYLQYARLVFNRMRS 410
L+SA S +S+HG V++ N +I Y + G ++ A +F ++S
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
+DL+SW S+ITG+ G ++A+ F L+ +++D +LL++ S L L +++
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT-SWNAMLGAYAMHGN 529
H L ++ V +SLI Y+KCG + AR FQQ++ + T +WNAM+ YA HG
Sbjct: 431 HALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGL 490
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
L LF+ M N+K D +TFT+ILTACSH+GL++EGL++ M Y I P HY
Sbjct: 491 GQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYA 550
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPR 649
+DLL RAG + +A L++SMP L T L CR G+ E+ +A +L++EP
Sbjct: 551 AAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPE 610
Query: 650 NSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+ +YV +S++ ++ +W+E A ++ M K++ +K PG+S IE+ Q
Sbjct: 611 DHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQ 657
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 221/448 (49%), Gaps = 31/448 (6%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
+K S +D + + LK ++ R + G++VH IK + +VGSSL+ +Y++ +
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAF--------RIASTMQDQRLYPN 142
+EDA F EI+ + V++ ++I + + AF + A TM P
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRD--IKTAFWLLGLMEMKAAVTMDAGTFAP- 208
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF----GVCDEIFETTLLDMYHKCGGVKMA 198
L++LL L++ +H ++ G +C+ ++ Y CG V A
Sbjct: 209 ---LLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEITICN-----AMISSYADCGSVSDA 257
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
VF + + + SWN +IA + + AFELF QM V D+ T + +C+
Sbjct: 258 KRVFDGLGGSKDLI-SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD---VTKARKMFERLRNKDAVIY 315
++ GKS+HG +I+ G+E A AL+ +Y +F + A +FE L++KD + +
Sbjct: 317 GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISW 376
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
N ++TG+ + L +A+ F + + + F L+ + SDL ++L + IH +
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAII 434
+++ + + +I Y+KCG ++ AR F ++ S+ V+W +MI GY HG ++
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLG 462
LF + +N+++D VT ++L A S G
Sbjct: 497 LFSQMCNQNVKLDHVTFTAILTACSHTG 524
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
L++S+ +D A + L+SC L L+ G+++H + K S+ FV SSLI +YS+ G
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 91 LEDAHRVFDEITNK-DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSL 149
+E A + F +I++K VA+ ++I YA G V + + S M +Q + + VT ++
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV--SLDLFSQMCNQNVKLDHVTFTAI 516
Query: 150 LHAAAKLGSLQEG 162
L A + G +QEG
Sbjct: 517 LTACSHTGLIQEG 529
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/648 (30%), Positives = 323/648 (49%), Gaps = 23/648 (3%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA--- 117
+ H I +D + + L + S+ G + A +F + D+ + ++ ++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 118 --HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG 175
HS S V+ R ++ ++ PN T + AA+ + GR IHG A+ G
Sbjct: 98 SPHSSLS-VFAHLRKSTDLK-----PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG-- 149
Query: 176 VCDE--IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
CD + + ++ MY K V+ A VF +M T + WN +I+ Y N +E+ +
Sbjct: 150 -CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL--WNTMISGYRKNEMYVESIQ 206
Query: 234 LFRQMIHRKVLP-DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY 292
+FR +I+ D TL + + + AEL L G IH + G T + LY
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLY 266
Query: 293 SKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
SK K +F R D V YN M+ GY N ++++F E++ + +
Sbjct: 267 SKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLV 326
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
+L+ L L +IHGY L+ +++ ++ + Y+K ++ AR +F+ +
Sbjct: 327 SLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
L SW +MI+GY +G ++AI LFR +Q+ + VT+ +L A +QLG LS K VH
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 531
L + V+ +LI YAKCG + AR LF MT++ +WN M+ Y +HG
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
E L +F M I P +TF +L ACSH+GLV+EG +IF SMI Y P HY C+
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 592 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 651
+D+L RAG L A +++M S+ TLL ACR++ DT + +++++ +L+P N
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNV 623
Query: 652 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
+VL+SNI + + + A +R K ++L PGY+LIE+ + V
Sbjct: 624 GYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 260/541 (48%), Gaps = 27/541 (4%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
LR+ DLK + S + + G+ +H ++ +S+ +GS+++++
Sbjct: 109 LRKSTDLKP-----NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKM 163
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSC-VYGAFRIASTMQDQRLYPNR 143
Y ++ ++EDA +VFD + KD + + ++I+ Y + FR RL +
Sbjct: 164 YFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL--DT 221
Query: 144 VTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFG 203
TL+ +L A A+L L+ G IH A + G D + T + +Y KCG +KM +A+F
Sbjct: 222 TTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCGKIKMGSALFR 280
Query: 204 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 263
+ + ++N +I Y NG+ + LF++++ TL + + L +
Sbjct: 281 EFRKPD--IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Query: 264 CHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGY 322
+IHGY ++ TAL +YSK ++ ARK+F+ K +N M++GY
Sbjct: 339 ---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 382
+N L +AI++F EM K SPN ++SA + L + L + +H V + + +
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 383 EIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 442
++ +I YAKCG + AR +F+ M ++ V+W +MI+GY HG EA+ +F +
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 443 NLRIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRAFHGKELSVNN--SLITTYAKCGKL 499
+ VT + +L A S G + E+ + + +R +G E SV + ++ + G L
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR--YGFEPSVKHYACMVDILGRAGHL 573
Query: 500 NMARYLFQQMT-ERCLTSWNAMLGAYAMHG--NYAEVLKLFNHMKLGNIKPDELTFTSIL 556
A + M+ E + W +LGA +H N A + KL + PD + + +L
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS----EKLFELDPDNVGYHVLL 629
Query: 557 T 557
+
Sbjct: 630 S 630
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 198/400 (49%), Gaps = 13/400 (3%)
Query: 7 SITGNLVASCRRRH--YGEVLRRYLDLKNSKFS-LDCSAITLCLKSCVALGRLEFGKRVH 63
+I N + S R++ Y E ++ + DL N + LD + + L + L L G ++H
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 64 VDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSC 123
+ K S +V + I LYS+ GK++ +F E D+VAY ++I Y +G +
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFET 183
+ + + RL + TLVSL+ + G L AIHGY ++ F + T
Sbjct: 305 LSLSLFKELMLSGARLRSS--TLVSLVPVS---GHLMLIYAIHGYCLKSNF-LSHASVST 358
Query: 184 TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
L +Y K ++ A +F + + ++ SWN +I+ Y NG +A LFR+M +
Sbjct: 359 ALTTVYSKLNEIESARKLFDE--SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARK 302
P+ +T+ + +CA+L L GK +H + E + TAL+ +Y+K + +AR+
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
+F+ + K+ V +N M++GY + EA+N+F+EM+ ++P FL ++ A S
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 363 IRLARSIHGYVL-RHQYITRVEIANQIIHTYAKCGYLQYA 401
++ I ++ R+ + V+ ++ + G+LQ A
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 204/617 (33%), Positives = 325/617 (52%), Gaps = 16/617 (2%)
Query: 89 GKLEDAHRVFDEITNKDLVAYTSII------TAYAHSGGSCVYGAF-RIASTMQDQRLYP 141
G DA +V D + + II + Y HSG Y A + + M + +
Sbjct: 257 GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ---YSALLKCFADMVESDVEC 313
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
++VT + +L A K+ SL G+ +H A++ G + + +L++MY K A V
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV-SNSLINMYCKLRKFGFARTV 372
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL- 260
F M+ SWN +IA NG +EA LF Q++ + PD T+ + + + + L
Sbjct: 373 FDNMSERDLI--SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMM 319
+ L K +H + I++ D TAL+D YS+ K A +FER N D V +N MM
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMM 489
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 379
GY ++ + + +F M K + + L I + +H Y ++ Y
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 439
+ +++ I+ Y KCG + A+ F+ + D V+WT+MI+G + +G + A +F +
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 499
+ + D T+ +L +A S L L +++H + + V SL+ YAKCG +
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 500 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
+ A LF+++ +T+WNAML A HG E L+LF MK IKPD++TF +L+AC
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
SHSGLV E + RSM +Y I P HY+C+ D L RAG + +A NL++SM S++
Sbjct: 730 SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 620 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 679
TLL+ACR+ GDTE G+ +A ++L+LEP +SS+YVL+SN+ A +WDE+ R M K
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKG 849
Query: 680 KELKSTPGYSLIELDKQ 696
++K PG+S IE+ +
Sbjct: 850 HKVKKDPGFSWIEVKNK 866
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 160/620 (25%), Positives = 286/620 (46%), Gaps = 52/620 (8%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
Y +L+ + D+ S D L L + V + L G++VH ++KL L+ V +
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG----GSCVYGAFRIASTMQ 135
SLI +Y + K A VFD ++ +DL+++ S+I A +G C++ MQ
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF--------MQ 406
Query: 136 DQR--LYPNRVTLVSLLHAAAKLGSLQEG----RAIHGYAIRRGFGVCDEIFETTLLDMY 189
R L P++ T+ S+L AA+ SL EG + +H +AI+ V D T L+D Y
Sbjct: 407 LLRCGLKPDQYTMTSVLKAAS---SLPEGLSLSKQVHVHAIKIN-NVSDSFVSTALIDAY 462
Query: 190 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
+ +K A +F + N + +WN ++A Y + + +LF M + D T
Sbjct: 463 SRNRCMKEAEILFERHN---FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR 308
LA +C L + GK +H Y I+ G + D+ + ++D+Y K D++ A+ F+ +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 368
D V + M++G ++N A +VF +M M V P+ L A S L + R
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 428
IH L+ + ++ YAKCG + A +F R+ ++ +W +M+ G HG
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHG-----KE 482
E + LF+ ++ ++ D VT I +L A S G +S A K + R+ HG E
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM-----RSMHGDYGIKPE 754
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
+ + L + G + A L + M+ E + + +L A + G+ ++ K
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVAT--K 812
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI----------VPGEVHYNCI 591
L ++P + + +L+ + + +++ R+M++ + + V ++H +
Sbjct: 813 LLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVV 872
Query: 592 IDLLSRAGQLTEAYNLVKSM 611
D +R +L Y VK M
Sbjct: 873 DDRSNRQTELI--YRKVKDM 890
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 169/719 (23%), Positives = 319/719 (44%), Gaps = 94/719 (13%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L++ + L GK H + N + F+ ++LI +YS+ G L A RVFD++ ++DL
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 107 VAYTSIITAYAHSGGSCVYG---AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGR 163
V++ SI+ AYA S V AF + ++ +Y +R+TL +L G +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 164 AIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
+ HGYA + G DE L+++Y K G VK +F +M + WN ++ AYL
Sbjct: 166 SFHGYACKIGLD-GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVL--WNLMLKAYL 222
Query: 224 HNGQALEAFELFRQMIHRKVLPDLLTL---------------------ANAILSCAEL-- 260
G EA +L + P+ +TL N S +E+
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIF 282
Query: 261 ------DYLCHGK-----SIHGYMIRMGVEPDMVA---------------------CTAL 288
+YL G+ M+ VE D V C AL
Sbjct: 283 RNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 289 --------------VDLYSK-----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 329
+++Y K F T M ER D + +N ++ G +N L V
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER----DLISWNSVIAGIAQNGLEV 398
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD-IRLARSIHGYVLRHQYITRVEIANQI 388
EA+ +F ++++ + P+ +++ A S L + + L++ +H + ++ ++ ++ +
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 389 IHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV--HHGHIDEAIILFRLLQRENLRI 446
I Y++ ++ A ++F R + DLV+W +M+ GY H GH + + LF L+ ++ R
Sbjct: 459 IDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGH--KTLKLFALMHKQGERS 515
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
D TL ++ + L ++ K+VH ++ + +L V++ ++ Y KCG ++ A++ F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 507 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 566
+ +W M+ +G +F+ M+L + PDE T ++ A S +E
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 635
Query: 567 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
+G QI + ++ ++D+ ++ G + +AY L K + + +A L+
Sbjct: 636 QGRQIHANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 627 CRLYGDTEIGEAIAKQI--LKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
+ +G+ + + KQ+ L ++P + ++S G + H+R+M D +K
Sbjct: 695 AQ-HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 328/617 (53%), Gaps = 20/617 (3%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
S LI +Y L A VF+E+ KD ++ +++ AYAH+G + M++
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF--FEEVLELFDLMRNYD 295
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
+ N+V S L AAA +G L +G AIH YA+++G + D T+L+ MY KCG +++A
Sbjct: 296 VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGL-IGDVSVATSLMSMYSKCGELEIA 354
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F +N V SW+ +IA+Y GQ EA LFR M+ + P+ +TL + + CA
Sbjct: 355 EQLF--INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNV 317
+ GKSIH Y I+ +E ++ TA++ +Y+K + A K FERL KDAV +N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
+ GY + +A +V+ M V P+ + ++ + D ++G +++H
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEAIILF 436
+ + +A+ +I+ + KC L A ++F++ + VSW M+ GY+ HG +EA+ F
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
R ++ E + ++VT +++++A ++L L VH + + V NSL+ YAKC
Sbjct: 593 RQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKC 652
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
G + + F +++ + + SWN ML AYA HG + + LF M+ +KPD ++F S+L
Sbjct: 653 GMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVL 712
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 616
+AC H+GLVEEG +IF M + I HY C++DLL +AG EA +++ M S
Sbjct: 713 SACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTS 772
Query: 617 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 676
LL++ R++ + + A Q++KLEP N S Y ++ R EV ++
Sbjct: 773 VGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY-------SQDRRLGEVNNV--- 822
Query: 677 TKDKELKSTPGYSLIEL 693
+K P S IE+
Sbjct: 823 ---SRIKKVPACSWIEV 836
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 175/688 (25%), Positives = 330/688 (47%), Gaps = 51/688 (7%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D + T LK+C + G R+H ++ L SD ++G++L+ +Y + L A +VF
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
D++ KD+V + ++++ A +G C A + M+ + + V+L +L+ A +KL
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNG--CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
R +HG I++GF F + L+DMY C + A +VF ++ + SW +
Sbjct: 217 SDVCRCLHGLVIKKGFIFA---FSSGLIDMYCNCADLYAAESVFEEVWRKDES--SWGTM 271
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 278
+AAY HNG E ELF M + V + + A+A+ + A + L G +IH Y ++ G+
Sbjct: 272 MAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGL 331
Query: 279 EPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
D+ T+L+ +YSK ++ A ++F + ++D V ++ M+ Y + EAI++F +
Sbjct: 332 IGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRD 391
Query: 338 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 397
M+++ + PN +++ + + RL +SIH Y ++ + +E A +I YAKCG
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 398 LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
A F R+ +D V++ ++ GY G ++A +++ ++ + DS T++ +LQ
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQT 511
Query: 458 LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTS 516
+ + V+ + E V ++LI + KC L A LF + E+ S
Sbjct: 512 CAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVS 571
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 576
WN M+ Y +HG E + F MK+ +P+ +TF +I+ A + + G+ + S+I
Sbjct: 572 WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 577 REYTIVPGEVHYNCIIDLLSRAGQLTE--------------AYNLVKSMPSTH------- 615
+ V N ++D+ ++ G + ++N + S + H
Sbjct: 632 QCGFCSQTPVG-NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 616 -------------SSAALCTLLSACRLYGDTEIGEAIAKQI---LKLEPRNSSSYVLISN 659
S + ++LSACR G E G+ I +++ K+E Y + +
Sbjct: 691 SLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE-VEHYACMVD 749
Query: 660 ILAEGGRWDEVAHIRAMTKDKELKSTPG 687
+L + G + E M + +K++ G
Sbjct: 750 LLGKAGLFGEAVE---MMRRMRVKTSVG 774
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 242/481 (50%), Gaps = 9/481 (1%)
Query: 53 LGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSI 112
+G L G +H +++ L D V +SL+ +YS+ G+LE A ++F I ++D+V+++++
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 113 ITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR 172
I +Y +G A + M + PN VTL S+L A + + + G++IH YAI+
Sbjct: 373 IASYEQAGQH--DEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA 430
Query: 173 GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF 232
E T ++ MY KCG A F ++ ++N L Y G A +AF
Sbjct: 431 DIESELET-ATAVISMYAKCGRFSPALKAFERLPIKDAV--AFNALAQGYTQIGDANKAF 487
Query: 233 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY 292
++++ M V PD T+ + +CA G ++G +I+ G + + AL++++
Sbjct: 488 DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMF 547
Query: 293 SKFD-VTKARKMFERLR-NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 350
+K D + A +F++ K V +N+MM GYL + EA+ F +M PN F
Sbjct: 548 TKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTF 607
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 410
+N++ A ++L +R+ S+H +++ + ++ + N ++ YAKCG ++ + F + +
Sbjct: 608 VNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN 667
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
+ +VSW +M++ Y HG A+ LF +Q L+ DSV+ +S+L A G + K +
Sbjct: 668 KYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Query: 471 -HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGAYAMHG 528
+ R E+ ++ K G A + ++M + + W A+L + MH
Sbjct: 728 FEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHC 787
Query: 529 N 529
N
Sbjct: 788 N 788
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 220/468 (47%), Gaps = 41/468 (8%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
WN +I Y G EA F M K + PD + A+ +CA G IH +
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 274 IRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAI 332
MG+E D+ TALV++Y K D+ AR++F+++ KD V +N M++G +N A+
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 333 NVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 392
+FH+M V + NLI AVS L + R +HG V++ +I ++ +I Y
Sbjct: 187 LLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMY 244
Query: 393 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 452
C L A VF + +D SW +M+ Y H+G +E + LF L++ ++R++ V
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 453 SLLQALSQLGCLSAVKEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMT 510
S LQA + +G L VK + Y G ++SV SL++ Y+KCG+L +A LF +
Sbjct: 305 SALQAAAYVGDL--VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Query: 511 ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ 570
+R + SW+AM+ +Y G + E + LF M +IKP+ +T TS+L C+ G
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 571 I----------------------------FRSMIREYTIVP--GEVHYNCIIDLLSRAGQ 600
I F ++ + +P V +N + ++ G
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 601 LTEAYNLVKSMP---STHSSAALCTLLSACRLYGDTEIGEAIAKQILK 645
+A+++ K+M S + +L C D G + QI+K
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 210/436 (48%), Gaps = 44/436 (10%)
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDL 327
+HG +I G++P L++ YS F +R +F+ +R+ V++N M+ GY + L
Sbjct: 24 VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 328 PVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 386
EA+ F M + + P+ F + A + D + IH + + V I
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 387 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 446
++ Y K L AR VF++M +D+V+W +M++G +G A++LF ++ + I
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI 199
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
D V+L +L+ A+S+L + +H L + G + ++ LI Y C L A +F
Sbjct: 200 DHVSLYNLIPAVSKLEKSDVCRCLHGLVIK--KGFIFAFSSGLIDMYCNCADLYAAESVF 257
Query: 507 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 566
+++ + +SW M+ AYA +G + EVL+LF+ M+ +++ +++ S L A ++ G +
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLV 317
Query: 567 EGLQIF-----RSMIREYTIVP---------GE----------------VHYNCIIDLLS 596
+G+ I + +I + ++ GE V ++ +I
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 597 RAGQLTEAYNLVKSMPSTH---SSAALCTLLSACRLYGDTEIGEAIAKQILK--LEPRNS 651
+AGQ EA +L + M H ++ L ++L C + +G++I +K +E
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 652 SSYVLISNILAEGGRW 667
++ +IS + A+ GR+
Sbjct: 438 TATAVIS-MYAKCGRF 452
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E + + +K KF + +++ L L G VH I+ S VG+SL+
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLV 646
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY-AHSGGSCVYGAFRIASTMQDQRLYP 141
+Y++ G +E + + F EI+NK +V++ ++++AY AH SC F +MQ+ L P
Sbjct: 647 DMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFL---SMQENELKP 703
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
+ V+ +S+L A G ++EG+ I R + ++D+ K G A +
Sbjct: 704 DSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEM 763
Query: 202 FGKMNATSTTVGSWNPLI 219
+M T+VG W L+
Sbjct: 764 MRRMR-VKTSVGVWGALL 780
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/703 (26%), Positives = 353/703 (50%), Gaps = 31/703 (4%)
Query: 22 GEVLRR---YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVG 78
GE L+ ++D+ D + LK C L G ++H +++ ++D
Sbjct: 159 GESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAA 218
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
S+L+ +Y++ + ++ RVF I K+ V++++II + + + A + MQ
Sbjct: 219 SALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN--NLLSLALKFFKEMQKVN 276
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
++ S+L + A L L+ G +H +A++ F D I T LDMY KC ++ A
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAA-DGIVRTATLDMYAKCDNMQDA 335
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F N+ + S+N +I Y +A LF +++ + D ++L+ +CA
Sbjct: 336 QILFD--NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNV 317
+ L G I+G I+ + D+ A +D+Y K + +A ++F+ +R +DAV +N
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
++ + +N E + +F M++ + P+ F +++ A + + IH +++
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG 512
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD--------------------LVSWT 417
+ + +I Y+KCG ++ A + +R R VSW
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
S+I+GYV ++A +LF + + D T ++L + L K++H +
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 632
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 537
++ + ++L+ Y+KCG L+ +R +F++ R +WNAM+ YA HG E ++LF
Sbjct: 633 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 692
Query: 538 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 597
M L NIKP+ +TF SIL AC+H GL+++GL+ F M R+Y + P HY+ ++D+L +
Sbjct: 693 ERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGK 752
Query: 598 AGQLTEAYNLVKSMPSTHSSAALCTLLSACRLY-GDTEIGEAIAKQILKLEPRNSSSYVL 656
+G++ A L++ MP TLL C ++ + E+ E +L+L+P++SS+Y L
Sbjct: 753 SGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTL 812
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
+SN+ A+ G W++V+ +R + +LK PG S +EL + V
Sbjct: 813 LSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHV 855
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 251/501 (50%), Gaps = 39/501 (7%)
Query: 140 YPNRVTLVS------LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
+ N+V VS + AK G+L+ G+ H + I GF + LL +Y
Sbjct: 39 FLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVL-NCLLQVYTNSR 97
Query: 194 GVKMAAAVFGKM------------NATSTT-----------------VGSWNPLIAAYLH 224
A+ VF KM N S + V SWN +++ YL
Sbjct: 98 DFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQ 157
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
NG++L++ E+F M + D T A + C+ L+ G IHG ++R+G + D+VA
Sbjct: 158 NGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVA 217
Query: 285 CTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
+AL+D+Y+K ++ ++F+ + K++V ++ ++ G ++N+L A+ F EM K++
Sbjct: 218 ASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
+ +++ +++ + + L ++RL +H + L+ + + + YAKC +Q A++
Sbjct: 278 GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI 337
Query: 404 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 463
+F+ + + S+ +MITGY H +A++LF L L D ++L + +A + +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 397
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
LS +++ L ++ ++ V N+ I Y KC L A +F +M R SWNA++ A
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
+ +G E L LF M I+PDE TF SIL AC+ G + G++I S+++
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASN 516
Query: 584 GEVHYNCIIDLLSRAGQLTEA 604
V + +ID+ S+ G + EA
Sbjct: 517 SSVGCS-LIDMYSKCGMIEEA 536
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 155/631 (24%), Positives = 276/631 (43%), Gaps = 63/631 (9%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSI---------------KLNLN 72
+ D N S+ + + K C G LE GK+ H I ++ N
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 73 SDCFVGSSLI-------------RLYSEYGKLED---AHRVFDEITNKDLVAYTSIITAY 116
S FV +S++ ++ + Y K D A+ F+ + +D+V++ S+++ Y
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 117 AHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV 176
+G S + + M + + + T +L + L G IHG +R G
Sbjct: 156 LQNGES--LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT 213
Query: 177 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
D + + LLDMY K + VF + ++ SW+ +IA + N A + F+
Sbjct: 214 -DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV--SWSAIIAGCVQNNLLSLALKFFK 270
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 296
+M A+ + SCA L L G +H + ++ D + TA +D+Y+K D
Sbjct: 271 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 330
Query: 297 -VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
+ A+ +F+ N + YN M+TGY + + +A+ +FH ++ + + +
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
A + ++ + I+G ++ V +AN I Y KC L A VF+ MR RD VS
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 450
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
W ++I + +G E + LF + R + D T S+L+A + G L E+H
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIV 509
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYL----FQ-----------------QMTERCL 514
++ SV SLI Y+KCG + A + FQ ++ E C+
Sbjct: 510 KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCV 569
Query: 515 TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 574
SWN+++ Y M + LF M I PD+ T+ ++L C++ G QI
Sbjct: 570 -SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 575 MIREYTIVPGEVHY-NCIIDLLSRAGQLTEA 604
+I++ + +V+ + ++D+ S+ G L ++
Sbjct: 629 VIKKE--LQSDVYICSTLVDMYSKCGDLHDS 657
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 183/374 (48%), Gaps = 23/374 (6%)
Query: 2 NMKHPSITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKR 61
N+ S + + H + L + L +S D +++ ++C + L G +
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG 121
++ +IK +L+ D V ++ I +Y + L +A RVFDE+ +D V++ +II A+ +G
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 122 SCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF 181
Y + +M R+ P+ T S+L A GSL G IH ++ G +
Sbjct: 464 G--YETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV- 519
Query: 182 ETTLLDMYHKCGGVKMAAAV----FGKMNATSTTVG--------------SWNPLIAAYL 223
+L+DMY KCG ++ A + F + N + T SWN +I+ Y+
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 224 HNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV 283
Q+ +A LF +M+ + PD T A + +CA L GK IH +I+ ++ D+
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 639
Query: 284 ACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
C+ LVD+YSK D+ +R MFE+ +D V +N M+ GY + EAI +F MI +
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 699
Query: 343 VSPNVALFLNLISA 356
+ PN F++++ A
Sbjct: 700 IKPNHVTFISILRA 713
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 183/418 (43%), Gaps = 42/418 (10%)
Query: 235 FRQMIHRKVLPDLLTLANAILS---------CAELDYLCHGKSIHGYMIRMGVEP----- 280
+R++ D L N++ + CA+ L GK H +MI G P
Sbjct: 27 YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVL 86
Query: 281 --------------------------DMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
D+V+ +++ YSK D+ KA F + +D V
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+N M++GYL+N +++I VF +M + + + F ++ S L D L IHG V
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
+R T V A+ ++ YAK + VF + ++ VSW+++I G V + + A+
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 493
F+ +Q+ N + S+L++ + L L ++H ++ + V + + Y
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 494 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
AKC + A+ LF S+NAM+ Y+ + + L LF+ + + DE++ +
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 554 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+ AC+ + EGLQI+ I+ + V N ID+ + L EA+ + M
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA-NAAIDMYGKCQALAEAFRVFDEM 443
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 289/519 (55%), Gaps = 6/519 (1%)
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
T L+ G + A VF + + WN +I Y N +A ++ M +
Sbjct: 57 TKLIHASSSFGDITFARQVFDDL--PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKAR 301
V PD T + + +C+ L +L G+ +H + R+G + D+ L+ LY+K + AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 302 KMFE--RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
+FE L + V + +++ Y +N P+EA+ +F +M KM V P+ +++++A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
L+D++ RSIH V++ ++ + YAKCG + A+++F++M+S +L+ W +M
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 420 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 479
I+GY +G+ EAI +F + +++R D++++ S + A +Q+G L + ++ R+ +
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
++ ++++LI +AKCG + AR +F + +R + W+AM+ Y +HG E + L+
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M+ G + P+++TF +L AC+HSG+V EG F M ++ I P + HY C+IDLL RAG
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAG 473
Query: 600 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 659
L +AY ++K MP LLSAC+ + E+GE A+Q+ ++P N+ YV +SN
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSN 533
Query: 660 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQRE 698
+ A WD VA +R K+K L G S +E+ + E
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 251/484 (51%), Gaps = 20/484 (4%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
K++H + L L F+ + LI S +G + A +VFD++ + + +II Y S
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY--S 95
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
+ A + S MQ R+ P+ T LL A + L LQ GR +H R GF D
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA-DV 154
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
+ L+ +Y KC + A VF + T+ SW +++AY NG+ +EA E+F QM
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSKF-D 296
V PD + L + + + L L G+SIH +++MG +EPD++ +L +Y+K
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL--ISLNTMYAKCGQ 272
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
V A+ +F+++++ + +++N M++GY KN EAI++FHEMI V P+ + ISA
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 357 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 416
+ + + ARS++ YV R Y V I++ +I +AKCG ++ ARLVF+R RD+V W
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVW 392
Query: 417 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 476
++MI GY HG EAI L+R ++R + + VT + LL A + G V+E R
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG---MVREGWWFFNR 449
Query: 477 AFHGK---ELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGAYAMH----- 527
K + +I + G L+ A + + M + +T W A+L A H
Sbjct: 450 MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 528 GNYA 531
G YA
Sbjct: 510 GEYA 513
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 223/418 (53%), Gaps = 9/418 (2%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
R H+ + L Y +++ ++ S D LK+C L L+ G+ VH +L ++D F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 77 VGSSLIRLYSEYGKLEDAHRVFD--EITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
V + LI LY++ +L A VF+ + + +V++T+I++AYA +G A I S M
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP--MEALEIFSQM 213
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+ + P+ V LVS+L+A L L++GR+IH ++ G + ++ +L MY KCG
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL-ISLNTMYAKCGQ 272
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
V A +F KM + + + WN +I+ Y NG A EA ++F +MI++ V PD +++ +AI
Sbjct: 273 VATAKILFDKMKSPNLIL--WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
+CA++ L +S++ Y+ R D+ +AL+D+++K V AR +F+R ++D V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+++ M+ GY + EAI+++ M + V PN FL L+ A + +R +
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHID 430
H+ + + +I + G+L A V M + V+ W ++++ H H++
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 302/570 (52%), Gaps = 13/570 (2%)
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
M+ PN T + A A+L + +H + I+ F D T +DM+ KC
Sbjct: 43 MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFW-SDVFVGTATVDMFVKCN 101
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
V AA VF +M T +WN +++ + +G +AF LFR+M ++ PD +T+
Sbjct: 102 SVDYAAKVFERMPERDAT--TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL 159
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD- 311
I S + L +++H IR+GV+ + + Y K D+ A+ +FE + D
Sbjct: 160 IQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 312 -AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
V +N M Y +A ++ M++ P+++ F+NL ++ + + R IH
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
+ + +E N I Y+K ARL+F+ M SR VSWT MI+GY G +D
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA-FHG---KELSVN 486
EA+ LF + + + D VTL+SL+ + G L K + RA +G + +
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA---RADIYGCKRDNVMIC 396
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
N+LI Y+KCG ++ AR +F E+ + +W M+ YA++G + E LKLF+ M + K
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
P+ +TF ++L AC+HSG +E+G + F M + Y I PG HY+C++DLL R G+L EA
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 607 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 666
L+++M + + LL+AC+++ + +I E A+ + LEP+ ++ YV ++NI A G
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGM 576
Query: 667 WDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
WD A IR++ K + +K PG S+I+++ +
Sbjct: 577 WDGFARIRSIMKQRNIKKYPGESVIQVNGK 606
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 276/575 (48%), Gaps = 23/575 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L + ++K F + K+C L + + VH IK SD FVG++ +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
++ + ++ A +VF+ + +D + ++++ + SG + AF + M+ + P+
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT--DKAFSLFREMRLNEITPD 152
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
VT+++L+ +A+ SL+ A+H IR G V + T + Y KCG + A VF
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV-ANTWISTYGKCGDLDSAKLVF 211
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
++ TV SWN + AY G+A +AF L+ M+ + PDL T N SC +
Sbjct: 212 EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTG 321
L G+ IH + I +G + D+ A + +YSK D AR +F+ + ++ V + VM++G
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG----YVLRHQ 377
Y + EA+ +FH MIK P++ L+LIS + + I Y +
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
V I N +I Y+KCG + AR +F+ + +V+WT+MI GY +G EA+ LF
Sbjct: 392 ---NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKC 496
+ + + + +T +++LQA + G L E + + ++ L + ++ +
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 497 GKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGNYAEVLKLFNHM--KLGNIKPD-ELTF 552
GKL A L + M+ + W A+L A +H N +K+ L N++P +
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRN----VKIAEQAAESLFNLEPQMAAPY 564
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTI--VPGE 585
+ + +G+ +G RS++++ I PGE
Sbjct: 565 VEMANIYAAAGMW-DGFARIRSIMKQRNIKKYPGE 598
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 202/411 (49%), Gaps = 13/411 (3%)
Query: 210 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 269
++V +WN I ++ +E+ LFR+M P+ T +CA L + + +
Sbjct: 15 SSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 270 HGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 328
H ++I+ D+ TA VD++ K + V A K+FER+ +DA +N M++G+ ++
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 329 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQI 388
+A ++F EM ++P+ + LI + S + ++L ++H +R +V +AN
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 389 IHTYAKCGYLQYARLVFNRMR--SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 446
I TY KCG L A+LVF + R +VSW SM Y G +A L+ L+ RE +
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
D T I+L + L+ + +H +++ N+ I+ Y+K AR LF
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 507 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 566
MT R SW M+ YA G+ E L LF+ M KPD +T S+++ C G +E
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 567 EGLQI-FRSMI----REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
G I R+ I R+ ++ N +ID+ S+ G + EA ++ + P
Sbjct: 375 TGKWIDARADIYGCKRDNVMI-----CNALIDMYSKCGSIHEARDIFDNTP 420
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 35/360 (9%)
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
+N+ + + + PVE++ +F EM + PN F + A + L D+ +H +++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 434
+ + + V + + + KC + YA VF RM RD +W +M++G+ GH D+A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 494
LFR ++ + DSVT+++L+Q+ S L ++ +H + R +++V N+ I+TY
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 495 KCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
KCG L+ A+ +F+ + +R + SWN+M AY++ G + L+ M KPD TF
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 553 TSILTACSHSGLVEEG------------------LQIFRSMIRE----------YTIVPG 584
++ +C + + +G + F SM + + I+
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 585 E--VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL---SACRLYGDTEIGEAI 639
V + +I + G + EA L +M + L TLL S C +G E G+ I
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/653 (30%), Positives = 339/653 (51%), Gaps = 10/653 (1%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
++SC L + +G RVH IK + VGSSL LYS+ G+ ++A +F + N D
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT 190
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+++T +I++ G A + S M + PN T V LL A++ LG L+ G+ IH
Sbjct: 191 ISWTMMISSLV--GARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH 247
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
I RG + + + +T+L+D Y + KM AV ++ V W +++ ++ N
Sbjct: 248 SNIIVRGIPL-NVVLKTSLVDFYSQFS--KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILS-CAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
+A EA F +M + P+ T + AILS C+ + L GK IH I++G E
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYS-AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 286 TALVDLYSKFDVTK--ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
ALVD+Y K ++ A ++F + + + V + ++ G + + + + EM+K V
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
PNV ++ A S LR +R IH Y+LR + + N ++ YA + YA
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 404 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 463
V M+ RD +++TS++T + G + A+ + + + +R+D ++L + A + LG
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
L K +HC + ++ SV NSL+ Y+KCG L A+ +F+++ + SWN ++
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
A +G + L F M++ +PD +TF +L+ACS+ L + GL+ F+ M + Y I P
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 584 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 643
HY ++ +L RAG+L EA +V++M ++ TLL ACR G+ +GE +A +
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKG 723
Query: 644 LKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
L L P + + Y+L++++ E G+ + R + +K L G S +E+ +
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGK 776
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 162/653 (24%), Positives = 305/653 (46%), Gaps = 45/653 (6%)
Query: 59 GKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH 118
G +H IK L + + ++L+ LY + + +A ++FDE++++ + A+T +I+A+
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
S A + M +PN T S++ + A L + G +HG I+ GF +
Sbjct: 102 S--QEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE-GN 158
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
+ ++L D+Y KCG K A +F + T SW +I++ + + EA + + +M
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQNADTI--SWTMMISSLVGARKWREALQFYSEM 216
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-V 297
+ V P+ T +L + L GK+IH +I G+ ++V T+LVD YS+F +
Sbjct: 217 VKAGVPPNEFTFVK-LLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKM 275
Query: 298 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
A ++ +D ++ +++G+++N EA+ F EM + + PN + ++S
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY-ARLVFNRMRSRDLVSW 416
S +R + + IH ++ + ++ N ++ Y KC + A VF M S ++VSW
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW 395
Query: 417 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 476
T++I G V HG + + L + + + + VTL +L+A S+L + V E+H R
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Query: 477 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 536
E+ V NSL+ YA K++ A + + M R ++ +++ + G + L +
Sbjct: 456 RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSV 515
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEG---------------LQIFRSMIREYT- 580
N+M I+ D+L+ ++A ++ G +E G + S++ Y+
Sbjct: 516 INYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSK 575
Query: 581 --------------IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM---PSTHSSAALCTL 623
P V +N ++ L+ G ++ A + + M + S L
Sbjct: 576 CGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLIL 635
Query: 624 LSACRLYGDTEIG---EAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHI 673
LSAC T++G + K+I +EP+ YV + IL GR +E +
Sbjct: 636 LSACSNGRLTDLGLEYFQVMKKIYNIEPQ-VEHYVHLVGILGRAGRLEEATGV 687
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 162/337 (48%), Gaps = 12/337 (3%)
Query: 250 LANAILSCAELDYLCHGKS------IHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARK 302
L N SC + C S IH +I+ G+ ++ C L+ LY K D + ARK
Sbjct: 20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARK 79
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
+F+ + ++ + VM++ + K+ A+++F EM+ PN F +++ + + LRD
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 422
I +HG V++ + + + + Y+KCG + A +F+ +++ D +SWT MI+
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 423 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 482
V EA+ + + + + + T + LL A S LG L K +H + G
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH--SNIIVRGIP 256
Query: 483 LSV--NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
L+V SL+ Y++ K+ A + E+ + W +++ + + E + F M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
+ ++P+ T+++IL+ CS ++ G QI I+
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 165/357 (46%), Gaps = 10/357 (2%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S+ V + R + E + +L++++ + + L C A+ L+FGK++H +
Sbjct: 295 SVVSGFVRNLRAK---EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLE-DAHRVFDEITNKDLVAYTSIITAYAHSGGSCVY 125
IK+ VG++L+ +Y + E +A RVF + + ++V++T++I G V
Sbjct: 352 IKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHG--FVQ 409
Query: 126 GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
F + M + + PN VTL +L A +KL ++ IH Y +RR + + +L
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD-GEMVVGNSL 468
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
+D Y V A V M ++ L+ + G+ A + M +
Sbjct: 469 VDAYASSRKVDYAWNVIRSMKRRDNI--TYTSLVTRFNELGKHEMALSVINYMYGDGIRM 526
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMF 304
D L+L I + A L L GK +H Y ++ G +LVD+YSK + A+K+F
Sbjct: 527 DQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF 586
Query: 305 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 361
E + D V +N +++G N A++ F EM P+ FL L+SA S+ R
Sbjct: 587 EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 321/643 (49%), Gaps = 64/643 (9%)
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
+SD + I Y G+ +A RVF + V+Y +I+ Y +G F +A
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG------EFELA 114
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE--------- 182
+ D+ P R LVS I GY R G E+FE
Sbjct: 115 RKLFDE--MPER-DLVSW------------NVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 183 -TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR 241
T+L Y + G V A +VF +M + SWN L++AY+ N + EA LF+ +
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDV--SWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 242 KVLPDLLTLANAILSCAELDYLCHGKSIHG--YMIRMGVEPDMVACTALVDLYSKF-DVT 298
++ +C ++ K + + M V D+V+ ++ Y++ +
Sbjct: 218 ALVS---------WNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKID 267
Query: 299 KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA-- 356
+AR++F+ +D + M++GY++N + EA +F +M + + A+ +
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER 327
Query: 357 ---VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+L D+ R++ + N +I YA+CG + A+ +F++M RD
Sbjct: 328 MEMAKELFDVMPCRNVSTW-------------NTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
VSW +MI GY GH EA+ LF ++RE R++ + S L + + L K++H
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
+ + V N+L+ Y KCG + A LF++M + + SWN M+ Y+ HG
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
L+ F MK +KPD+ T ++L+ACSH+GLV++G Q F +M ++Y ++P HY C++D
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 594 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 653
LL RAG L +A+NL+K+MP +A TLL A R++G+TE+ E A +I +EP NS
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 654 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
YVL+SN+ A GRW +V +R +DK +K PGYS IE+ +
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
H E LR ++ ++ L+ S+ + L +C + LE GK++H +K + CFVG+
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 448
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
+L+ +Y + G +E+A+ +F E+ KD+V++ ++I Y+ G V A R +M+ + L
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV--ALRFFESMKREGL 506
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV 176
P+ T+V++L A + G + +GR + Y + + +GV
Sbjct: 507 KPDDATMVAVLSACSHTGLVDKGRQ-YFYTMTQDYGV 542
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 327/635 (51%), Gaps = 15/635 (2%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
++V K L+ +V +SL+ LY + G + A +FDE+ +D V + ++I Y+ +
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
G C A+++ M Q P+ TLV+LL + G + +GR++HG A + G + D
Sbjct: 130 GYEC--DAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL-DS 186
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
+ L+ Y KC + A +F +M ST SWN +I AY +G EA +F+ M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTV--SWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VT 298
+ V +T+ N + + ++ H + +H +++ G+ D+ T+LV YS+ +
Sbjct: 245 EKNVEISPVTIINLLSA-----HVSH-EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 299 KARKMFERLRNKDAVIYNVMMTGYL-KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
A +++ + V +++ Y K D+ + A+ F + ++ + + + ++
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDI-AVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
I + S+HGY ++ T+ + N +I Y+K ++ +F +++ L+SW
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWN 417
Query: 418 SMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 476
S+I+G V G A +F +++ L D++T+ SLL SQL CL+ KE+H T R
Sbjct: 418 SVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLR 477
Query: 477 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 536
E V +LI YAKCG A +F+ + C +WN+M+ Y++ G L
Sbjct: 478 NNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSC 537
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
+ M+ +KPDE+TF +L+AC+H G V+EG FR+MI+E+ I P HY ++ LL
Sbjct: 538 YLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLG 597
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 656
RA TEA L+ M SA LLSAC ++ + E+GE +A+++ L+ +N YVL
Sbjct: 598 RACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVL 657
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
+SN+ A WD+V +R M KD G S I
Sbjct: 658 MSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 136/562 (24%), Positives = 249/562 (44%), Gaps = 46/562 (8%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
R + + + ++ + FS + + L C G + G+ VH + K L D
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
V ++LI YS+ +L A +F E+ +K V++ ++I AY+ SG A + M +
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQ--EEAITVFKNMFE 245
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
+ + + VT+++LL A +H ++ G V D T+L+ Y +CG +
Sbjct: 246 KNVEISPVTIINLLSAHV------SHEPLHCLVVKCGM-VNDISVVTSLVCAYSRCGCLV 298
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A ++ +A ++ +++ Y G A F + + D + L +
Sbjct: 299 SAERLYA--SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 315
C + ++ G S+HGY I+ G+ + L+ +YSKF DV +FE+L+ + +
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 316 NVMMTGYLKNDLPVEAINVFHE-MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
N +++G +++ A VFH+ M+ + P+ +L++ S L + L + +HGY L
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 434
R+ + + +I YAKCG A VF +++ +W SMI+GY G A+
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 536
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 494
+ ++ + L+ D +T + +L A + G + K + +RA KE ++ +L
Sbjct: 537 CYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK----ICFRAMI-KEFGISPTLQHYAL 591
Query: 495 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 554
G L A CL + E L L M +IKPD + +
Sbjct: 592 MVGLLGRA----------CL---------------FTEALYLIWKM---DIKPDSAVWGA 623
Query: 555 ILTACSHSGLVEEGLQIFRSMI 576
+L+AC +E G + R M
Sbjct: 624 LLSACIIHRELEVGEYVARKMF 645
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 6/254 (2%)
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA-LSQLGCLS-AVK 468
RDL + S++ +H I +FR L R +L + T+ LQA + V+
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 469 EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 528
+V ++ + + V SL+ Y K G + A+ LF +M ER WNA++ Y+ +G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 529 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 588
+ KLF M P T ++L C G V +G + + + +V
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK- 189
Query: 589 NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEP 648
N +I S+ +L A L + M S+ + T++ A G E EAI E
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKD-KSTVSWNTMIGAYSQSGLQE--EAITVFKNMFEK 246
Query: 649 RNSSSYVLISNILA 662
S V I N+L+
Sbjct: 247 NVEISPVTIINLLS 260
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/662 (29%), Positives = 344/662 (51%), Gaps = 11/662 (1%)
Query: 41 SAITLCLKSCVALGRLEFGKRVHVDSIKLNLNS---DCFVGSSLIRLYSEYGKLEDAHRV 97
S++ + CV++ L+ +++H + + + ++LI +Y G LE A +V
Sbjct: 95 SSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKV 154
Query: 98 FDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG 157
FD++ ++++V+Y ++ +AY+ + Y AF + + M + + PN T SL+ A L
Sbjct: 155 FDKMPHRNVVSYNALYSAYSRNPDFASY-AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNP 217
+ G +++ I+ G+ + + +T++L MY CG ++ A +F +N +WN
Sbjct: 214 DVLMGSSLNSQIIKLGYSD-NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAV--AWNT 270
Query: 218 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 277
+I L N + + FR M+ V P T + + C++L GK IH +I
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 278 VEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 336
D+ AL+D+Y S D+ +A +F R+ N + V +N +++G +N +A+ ++
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 337 EMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 395
+++MS P+ F ISA ++ + +HG V + Y V + ++ Y K
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKN 450
Query: 396 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 455
+ A+ VF+ M+ RD+V WT MI G+ G+ + A+ F + RE R D +L S++
Sbjct: 451 REAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVI 510
Query: 456 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT 515
A S + L + HCL R +SV +L+ Y K GK A +F + L
Sbjct: 511 GACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLK 570
Query: 516 SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 575
WN+MLGAY+ HG + L F + PD +T+ S+L ACSH G +G ++ M
Sbjct: 571 CWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM 630
Query: 576 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC-TLLSACRLYGDTE 634
+E I G HY+C+++L+S+AG + EA L++ P ++ A L TLLSAC + +
Sbjct: 631 -KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQ 689
Query: 635 IGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
IG A+QILKL+P ++++++L+SN+ A GRW++VA +R + PG S IE++
Sbjct: 690 IGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVN 749
Query: 695 KQ 696
Sbjct: 750 NN 751
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 186/392 (47%), Gaps = 16/392 (4%)
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALE-------AFELF 235
L+ MY +C ++ A VF KM + + Y+ G +L +F++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 236 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF 295
M ++ ++ L C + L + IH ++ G + A +L S +
Sbjct: 86 FFMPLNEIASSVVELTR---KCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 296 ----DVTKARKMFERLRNKDAVIYNVMMTGYLKN-DLPVEAINVFHEMIKMSVSPNVALF 350
+ +ARK+F+++ +++ V YN + + Y +N D A + M V PN + F
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 410
+L+ + L D+ + S++ +++ Y V + ++ Y+ CG L+ AR +F+ + +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
RD V+W +MI G + + I++ ++ FR + + T +L S+LG S K +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 530
H + +L ++N+L+ Y CG + A Y+F ++ L SWN+++ + +G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 531 AEVLKLFNH-MKLGNIKPDELTFTSILTACSH 561
+ + ++ +++ +PDE TF++ ++A +
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
++++ K D +++ + +C + L G+ H +I+ + V +L+ +Y +
Sbjct: 491 FIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGK 550
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
GK E A +F +N DL + S++ AY+ G V A + + P+ VT +
Sbjct: 551 NGKYETAETIFSLASNPDLKCWNSMLGAYSQHG--MVEKALSFFEQILENGFMPDAVTYL 608
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
SLL A + GS +G+ + +G + + + ++++ K G V A + +
Sbjct: 609 SLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHY-SCMVNLVSKAGLVDEALELIEQSPP 667
Query: 208 TSTTVGSWNPLIAA 221
+ W L++A
Sbjct: 668 GNNQAELWRTLLSA 681
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 297/558 (53%), Gaps = 10/558 (1%)
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
N T ++ L A+ G+ IHG+ +R+GF T+L++MY KCG ++ A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
FG + V +N LI+ ++ NG L+A E +R+M +LPD T ++L ++
Sbjct: 119 FG---GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFP-SLLKGSDAM 174
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD-AVIYNVMM 319
L K +HG ++G + D + LV YSKF V A+K+F+ L ++D +V++N ++
Sbjct: 175 ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 379
GY + +A+ VF +M + V + +++SA + DI RSIHG ++
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 439
+ + ++N +I Y K +L+ A +F M RDL +W S++ + + G D + LF +
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELS---VNNSLITTYAK 495
+R D VTL ++L +L L +E+H + ++ S ++NSL+ Y K
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 496 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 555
CG L AR +F M + SWN M+ Y + L +F+ M +KPDE+TF +
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
L ACSHSG + EG M Y I+P HY C+ID+L RA +L EAY L S P
Sbjct: 475 LQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICD 534
Query: 616 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 675
+ ++LS+CRL+G+ ++ K++ +LEP + YVL+SN+ E G+++EV +R
Sbjct: 535 NPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRD 594
Query: 676 MTKDKELKSTPGYSLIEL 693
+ + +K TPG S I L
Sbjct: 595 AMRQQNVKKTPGCSWIVL 612
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 167/308 (54%), Gaps = 17/308 (5%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK-DLVAYTSIITAYAH 118
K+VH + KL +SDC+VGS L+ YS++ +EDA +VFDE+ ++ D V + +++ Y+
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 119 SGGSCVY---GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG 175
++ A + S M+++ + +R T+ S+L A G + GR+IHG A++ G G
Sbjct: 240 -----IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 176 VCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF 235
D + L+DMY K ++ A ++F M+ + +WN ++ + + G LF
Sbjct: 295 -SDIVVSNALIDMYGKSKWLEEANSIFEAMDERD--LFTWNSVLCVHDYCGDHDGTLALF 351
Query: 236 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV----EPDMVACTALVDL 291
+M+ + PD++TL + +C L L G+ IHGYMI G+ + +L+D+
Sbjct: 352 ERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDM 411
Query: 292 YSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 350
Y K D+ AR +F+ +R KD+ +N+M+ GY A+++F M + V P+ F
Sbjct: 412 YVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITF 471
Query: 351 LNLISAVS 358
+ L+ A S
Sbjct: 472 VGLLQACS 479
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 7/234 (2%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT 102
IT L + G ++ G+ +H ++K SD V ++LI +Y + LE+A+ +F+ +
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 103 NKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
+DL + S++ + + G G + M + P+ VTL ++L +L SL++G
Sbjct: 325 ERDLFTWNSVLCVHDYCGDH--DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 163 RAIHGYAIRRGF---GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI 219
R IHGY I G +E +L+DMY KCG ++ A VF M + SWN +I
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSA--SWNIMI 440
Query: 220 AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
Y A ++F M V PD +T + +C+ +L G++ M
Sbjct: 441 NGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/624 (29%), Positives = 316/624 (50%), Gaps = 14/624 (2%)
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGS----CVYGAFRIA 131
F +S +R G L A +VFD++ + D+V++TSII Y + S ++ A R+
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
D + P+ L +L A + ++ G ++H YA++ + ++LLDMY +
Sbjct: 101 ----DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKR 155
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
G + + VF +M + +W +I +H G+ E F +M + L D T A
Sbjct: 156 VGKIDKSCRVFSEMPFRNAV--TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFA 213
Query: 252 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 310
A+ +CA L + +GK+IH ++I G + +L +Y++ ++ +FE + +
Sbjct: 214 IALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER 273
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
D V + ++ Y + V+A+ F +M V PN F ++ SA + L + +H
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
VL + ++N ++ Y+ CG L A ++F MR RD++SW+++I GY G +
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 490
E F +++ + L SLL + + ++VH L + +V +SLI
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI 453
Query: 491 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH-MKLGNIKPDE 549
Y+KCG + A +F + + S AM+ YA HG E + LF +K+G +PD
Sbjct: 454 NMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FRPDS 512
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 609
+TF S+LTAC+HSG ++ G F M Y + P + HY C++DLL RAG+L++A ++
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 610 SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 669
M TLL AC+ GD E G A++IL+L+P +++ V ++NI + G +E
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEE 632
Query: 670 VAHIRAMTKDKELKSTPGYSLIEL 693
A++R K K + PG+S I++
Sbjct: 633 AANVRKNMKAKGVIKEPGWSSIKI 656
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/615 (26%), Positives = 275/615 (44%), Gaps = 68/615 (11%)
Query: 21 YGEVLRRYLDLKNSKFSL---------------DCSAITLCLKSCVALGRLEFGKRVHVD 65
+ +++RY+ NS +L D S +++ LK+C + +G+ +H
Sbjct: 74 WTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAY 133
Query: 66 SIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVY 125
++K +L S +VGSSL+ +Y GK++ + RVF E+ ++ V +T+IIT H+G
Sbjct: 134 AVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR--YK 191
Query: 126 GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
S M + T L A A L ++ G+AIH + I RGF V +L
Sbjct: 192 EGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF-VTTLCVANSL 250
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
MY +CG ++ +F M + V SW LI AY GQ ++A E F +M + +V P
Sbjct: 251 ATMYTECGEMQDGLCLFENM--SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMF 304
+ T A+ +CA L L G+ +H ++ +G+ + +++ +YS ++ A +F
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 305 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 364
+ +R +D + ++ ++ GY + E F M + P +L+S ++ I
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 365 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV 424
R +H L + + +I+ Y+KCG ++ A ++F D+VS T+MI GY
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 484
HG EAI LF + R DSVT IS+L A + G L FH
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL----------GFH----- 533
Query: 485 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 544
NM + + + + M+ G ++ K+ N M
Sbjct: 534 -------------YFNMMQETYNMRPAK--EHYGCMVDLLCRAGRLSDAEKMINEMSW-- 576
Query: 545 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC------IIDLLSRA 598
K D++ +T++L AC G +E G + ++ E+ C + ++ S
Sbjct: 577 -KKDDVVWTTLLIACKAKGDIERGRRAAERIL--------ELDPTCATALVTLANIYSST 627
Query: 599 GQLTEAYNLVKSMPS 613
G L EA N+ K+M +
Sbjct: 628 GNLEEAANVRKNMKA 642
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 155/320 (48%), Gaps = 16/320 (5%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S T +VA R + + ++ ++NS+ + +C +L RL +G+++H +
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV 336
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
+ L LN V +S++++YS G L A +F + +D++++++II Y +G +G
Sbjct: 337 LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG----FG 392
Query: 127 --AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT 184
F+ S M+ P L SLL + + ++ GR +H A+ G + ++
Sbjct: 393 EEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ-NSTVRSS 451
Query: 185 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL 244
L++MY KCG +K A+ +FG+ + + S +I Y +G++ EA +LF + +
Sbjct: 452 LINMYSKCGSIKEASMIFGETDRDD--IVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 245 PDLLTLANAILSC---AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKA 300
PD +T + + +C +LD H ++ M + C +VDL + ++ A
Sbjct: 510 PDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC--MVDLLCRAGRLSDA 567
Query: 301 RKMFERLR-NKDAVIYNVMM 319
KM + KD V++ ++
Sbjct: 568 EKMINEMSWKKDDVVWTTLL 587
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 177/575 (30%), Positives = 308/575 (53%), Gaps = 43/575 (7%)
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDM--YHKCGGVKMAAAVFGKMNATSTTVGSW 215
SL++ + HG+ IR G D + L M ++ A VF ++ ++ +W
Sbjct: 42 SLRQLKQTHGHMIRTG-TFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF--AW 98
Query: 216 NPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
N LI AY + + F M+ + P+ T I + AE+ L G+S+HG +
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 275 RMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
+ V D+ +L+ Y S D+ A K+F ++ KD V +N M+ G+++ P +A+
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
+F +M V + + ++SA + +R++ R + Y+ ++ + +AN ++ Y
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 394 KCGYLQYARLVFNRMRSRDLVSWTSMITGYV----------------------------- 424
KCG ++ A+ +F+ M +D V+WT+M+ GY
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 425 --HHGHIDEAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
+G +EA+I+F LQ ++N++++ +TL+S L A +Q+G L + +H +Y HG
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH--SYIKKHGI 396
Query: 482 ELS--VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
++ V ++LI Y+KCG L +R +F + +R + W+AM+G AMHG E + +F
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M+ N+KP+ +TFT++ ACSH+GLV+E +F M Y IVP E HY CI+D+L R+G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 600 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 659
L +A +++MP S++ LL AC+++ + + E ++L+LEPRN ++VL+SN
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 660 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
I A+ G+W+ V+ +R + LK PG S IE+D
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 249/527 (47%), Gaps = 58/527 (11%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL--YSEYGKLEDAHRVFDEITNK 104
++ CV+L +L K+ H I+ SD + S L + S + LE A +VFDEI
Sbjct: 37 IERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 105 DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
+ A+ ++I AYA SG V + + + + YPN+ T L+ AAA++ SL G++
Sbjct: 94 NSFAWNTLIRAYA-SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 224
+HG A++ G D +L+ Y CG + A VF + V SWN +I ++
Sbjct: 153 LHGMAVKSAVG-SDVFVANSLIHCYFSCGDLDSACKVFTTIK--EKDVVSWNSMINGFVQ 209
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
G +A ELF++M V +T+ + +CA++ L G+ + Y+ V ++
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 285 CTALVDLYSK----------FDVTK----------------------ARKMFERLRNKDA 312
A++D+Y+K FD + AR++ + KD
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
V +N +++ Y +N P EA+ VFHE+ ++ ++ N ++ +SA + + + L R IH
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
Y+ +H + + +IH Y+KCG L+ +R VFN + RD+ W++MI G HG +E
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN----- 486
A+ +F +Q N++ + VT ++ A S G + + + FH E +
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL-------FHQMESNYGIVPEE 502
Query: 487 ---NSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGN 529
++ + G L A + M TS W A+LGA +H N
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 219/463 (47%), Gaps = 49/463 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
+K+ + L G+ +H ++K + SD FV +SLI Y G L+ A +VF I KD+
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V++ S+I + G A + M+ + + + VT+V +L A AK+ +L+ GR +
Sbjct: 198 VSWNSMINGFVQKGSP--DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM----NATSTT----------- 211
Y V + +LDMY KCG ++ A +F M N T TT
Sbjct: 256 SYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 212 --------------VGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLANAILS 256
+ +WN LI+AY NG+ EA +F ++ + + + + +TL + + +
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 315
CA++ L G+ IH Y+ + G+ + +AL+ +YSK D+ K+R++F + +D ++
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
+ M+ G + EA+++F++M + +V PN F N+ A S + A S L
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES-----LF 489
Query: 376 HQYITRVEIANQ------IIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGH 428
HQ + I + I+ + GYL+ A M S W +++ H +
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Query: 429 IDEA-IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
++ A + RLL+ E + L+S + A +LG V E+
Sbjct: 550 LNLAEMACTRLLELEPRNDGAHVLLSNIYA--KLGKWENVSEL 590
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/606 (29%), Positives = 316/606 (52%), Gaps = 71/606 (11%)
Query: 163 RAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATS-----------T 210
R +H I+ GF +EIF + L+D Y KCG ++ VF KM + T
Sbjct: 40 RYVHASVIKSGFS--NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 211 TVG------------------SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
+G +WN +++ + + + EA F M + + + A+
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 311
+ +C+ L+ + G +H + + D+ +ALVD+YSK +V A+++F+ + +++
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
V +N ++T + +N VEA++VF M++ V P+ ++ISA + L I++ + +HG
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 372 YVLRHQYI-TRVEIANQIIHTYAKC--------------------------GY-----LQ 399
V+++ + + ++N + YAKC GY +
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 400 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 459
ARL+F +M R++VSW ++I GY +G +EA+ LF LL+RE++ + ++L+A +
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 460 QLGCLSAVKEVHC------LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
L L + H +++ ++ V NSLI Y KCG + +F++M ER
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
SWNAM+ +A +G E L+LF M KPD +T +L+AC H+G VEEG F
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 633
SM R++ + P HY C++DLL RAG L EA ++++ MP S +LL+AC+++ +
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 634 EIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
+G+ +A+++L++EP NS YVL+SN+ AE G+W++V ++R + + + PG S I++
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 694 DKQREV 699
V
Sbjct: 638 QGHDHV 643
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 207/452 (45%), Gaps = 54/452 (11%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L + + F L+ + L +C L + G +VH K SD ++GS+L+
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
+YS+ G + DA RVFDE+ ++++V++ S+IT + +G + A + M + R+ P+
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAV--EALDVFQMMLESRVEPD 252
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
VTL S++ A A L +++ G+ +HG ++ D I +DMY KC +K A +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 203 GKMN----------------ATST-------------TVGSWNPLIAAYLHNGQALEAFE 233
M A ST V SWN LIA Y NG+ EA
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 234 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI------HGYMIRMGVEPDMVACTA 287
LF + V P + AN + +CA+L L G HG+ + G E D+ +
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 288 LVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 346
L+D+Y K V + +F ++ +D V +N M+ G+ +N EA+ +F EM++ P+
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 347 VALFLNLISA------VSDLRDI--RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL 398
+ ++SA V + R + R LR Y V++ + G+L
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL-------LGRAGFL 545
Query: 399 QYARLVFNRMRSR-DLVSWTSMITGYVHHGHI 429
+ A+ + M + D V W S++ H +I
Sbjct: 546 EEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 281/533 (52%), Gaps = 4/533 (0%)
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 224
IH + I G + L+ + G + A VF ++ +V +N +I Y
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV--YNSMIVVYSR 93
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
E L+ QMI K+ PD T I +C L G+++ + G + D+
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFV 153
Query: 285 CTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
C+++++LY K + +A +F ++ +D + + M+TG+ + ++A+ + EM
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGF 213
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
+ + L L+ A DL D ++ RS+HGY+ R V + ++ YAK G+++ A
Sbjct: 214 GRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASR 273
Query: 404 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 463
VF+RM + VSW S+I+G+ +G ++A +Q + D VTL+ +L A SQ+G
Sbjct: 274 VFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
L + VHC + H + +L+ Y+KCG L+ +R +F+ + + L WN M+
Sbjct: 334 LKTGRLVHCYILKR-HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC 392
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
Y +HGN EV+ LF M NI+PD TF S+L+A SHSGLVE+G F MI +Y I P
Sbjct: 393 YGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQP 452
Query: 584 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 643
E HY C+IDLL+RAG++ EA +++ S ++ LLS C + + +G+ A +I
Sbjct: 453 SEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKI 512
Query: 644 LKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
L+L P + L+SN A +W EVA +R + ++ ++ PGYS IE++ +
Sbjct: 513 LQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGE 565
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 250/450 (55%), Gaps = 18/450 (4%)
Query: 12 LVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNL 71
+V R ++ EVLR Y + K D S T+ +K+C++ LE G+ V ++
Sbjct: 88 IVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGY 147
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
+D FV SS++ LY + GK+++A +F ++ +D++ +T+++T +A +G S A
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKS--LKAVEFY 205
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
MQ++ +RV ++ LL A+ LG + GR++HGY R G + + + ET+L+DMY K
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM-NVVVETSLVDMYAK 264
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
G +++A+ VF +M T SW LI+ + NG A +AFE +M PDL+TL
Sbjct: 265 VGFIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 252 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK 310
+++C+++ L G+ +H Y+++ V D V TAL+D+YSK ++ +R++FE + K
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRK 381
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
D V +N M++ Y + E +++F +M + ++ P+ A F +L+SA+S + + H
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQ--H 439
Query: 371 GY-VLRHQYITRVEIANQ----IIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYV 424
+ V+ ++Y +++ + + +I A+ G ++ A + N + L W ++++G +
Sbjct: 440 WFSVMINKY--KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCI 497
Query: 425 HHGHIDEA-IILFRLLQRENLRIDSVTLIS 453
+H ++ I ++LQ I TL+S
Sbjct: 498 NHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 202/395 (51%), Gaps = 9/395 (2%)
Query: 70 NLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFR 129
NL + + LI G++ A +VFDE+ + + Y S+I Y S G R
Sbjct: 45 NLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY--SRGKNPDEVLR 102
Query: 130 IASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDM 188
+ M +++ P+ T + A L++G A+ A+ FG +++F +++L++
Sbjct: 103 LYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV--DFGYKNDVFVCSSVLNL 160
Query: 189 YHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
Y KCG + A +FGKM V W ++ + G++L+A E +R+M + D +
Sbjct: 161 YMKCGKMDEAEVLFGKM--AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRV 218
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERL 307
+ + + +L G+S+HGY+ R G+ ++V T+LVD+Y+K + A ++F R+
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
K AV + +++G+ +N L +A EM + P++ + ++ A S + ++ R
Sbjct: 279 MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
+H Y+L+ + RV A ++ Y+KCG L +R +F + +DLV W +MI+ Y HG
Sbjct: 339 LVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHG 397
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
+ E + LF + N+ D T SLL ALS G
Sbjct: 398 NGQEVVSLFLKMTESNIEPDHATFASLLSALSHSG 432
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 198/672 (29%), Positives = 349/672 (51%), Gaps = 20/672 (2%)
Query: 37 SLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHR 96
+LD + ++ G + GK H IK +LN ++ ++L+ +Y + +L A +
Sbjct: 44 ALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 97 VFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKL 156
+FD + ++++++ S+I+ Y G A + ++ L ++ T L +
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMG--FYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 157 GSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSW 215
L G +HG + G ++F L+DMY KCG + A ++F + + SW
Sbjct: 162 CDLDLGELLHGLVVVNGLS--QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV--SW 217
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA-NAILS--CAELD--YLCHGKSIH 270
N LI+ Y+ G A E L +M HR L +L T A ++L C L+ ++ G +IH
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKM-HRDGL-NLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 271 GYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKND--- 326
Y ++G+E D+V TAL+D+Y+K + +A K+F + +K+ V YN M++G+L+ D
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 327 --LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
EA +F +M + + P+ + F ++ A S + + R IH + ++ + + I
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
+ +I YA G + F +D+ SWTSMI +V + ++ A LFR L ++
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 504
R + T+ ++ A + LS+ +++ ++ SV S I+ YAK G + +A
Sbjct: 456 RPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQ 515
Query: 505 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
+F ++ + +++AM+ + A HG+ E L +F MK IKP++ F +L AC H GL
Sbjct: 516 VFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGL 575
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
V +GL+ F+ M +Y I P E H+ C++DLL R G+L++A NL+ S LL
Sbjct: 576 VTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635
Query: 625 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 684
S+CR+Y D+ IG+ +A+++++LEP S SYVL+ NI + G +R + +D+ +K
Sbjct: 636 SSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKK 695
Query: 685 TPGYSLIELDKQ 696
P S I + Q
Sbjct: 696 EPALSWIVIGNQ 707
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 215/467 (46%), Gaps = 23/467 (4%)
Query: 21 YGEVLRRYLDLKNSKFSLD----CSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
Y + + +L+ + + LD A+ C + C L+ G+ +H + L+ F
Sbjct: 129 YEQAMELFLEAREANLKLDKFTYAGALGFCGERC----DLDLGELLHGLVVVNGLSQQVF 184
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
+ + LI +YS+ GKL+ A +FD +D V++ S+I+ Y G + + + M
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAA--EEPLNLLAKMHR 242
Query: 137 QRLYPNRVTLVSLLHAAA---KLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
L L S+L A G +++G AIH Y + G D + T LLDMY K G
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF-DIVVRTALLDMYAKNG 301
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLH-----NGQALEAFELFRQMIHRKVLPDLL 248
+K A +F M S V ++N +I+ +L + + EAF+LF M R + P
Sbjct: 302 SLKEAIKLFSLM--PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPS 359
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERL 307
T + + +C+ L +G+ IH + + + D +AL++LY+ T+ + F
Sbjct: 360 TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST 419
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
+D + M+ +++N+ A ++F ++ + P ++SA +D +
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
I GY ++ + I YAK G + A VF +++ D+ ++++MI+ HG
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCL 473
+EA+ +F ++ ++ + + +L A G ++ +K C+
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 318/665 (47%), Gaps = 56/665 (8%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAY--TSIITAYAHSGGSCVYGAFRIASTMQD 136
S LI Y G L A + D Y S+I +Y +G C + M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNG--CANKCLYLFGLMHS 120
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
P+ T + A ++ S++ G + H ++ GF + + L+ MY +C +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSLS 179
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAIL 255
A VF +M+ V SWN +I +Y G+ A E+F +M + PD +TL N +
Sbjct: 180 DARKVFDEMSVWD--VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF----------------DVTK 299
CA L GK +H + + + +M LVD+Y+K DV
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 300 ----------------ARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
A ++FE+++ + D V ++ ++GY + L EA+ V +M+
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 340 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE-------IANQIIHTY 392
+ PN ++++S + + + + IH Y +++ R + NQ+I Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 393 AKCGYLQYARLVFNRM--RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL--RIDS 448
AKC + AR +F+ + + RD+V+WT MI GY HG ++A+ L + E+ R ++
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 449 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNSLITTYAKCGKLNMARYLFQ 507
T+ L A + L L K++H R L V+N LI YAKCG ++ AR +F
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 508 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE 567
M + +W +++ Y MHG E L +F+ M+ K D +T +L ACSHSG++++
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 568 GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSAC 627
G++ F M + + PG HY C++DLL RAG+L A L++ MP LS C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 628 RLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPG 687
R++G E+GE A++I +L + SY L+SN+ A GRW +V IR++ + K +K PG
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 688 YSLIE 692
S +E
Sbjct: 718 CSWVE 722
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 271/575 (47%), Gaps = 73/575 (12%)
Query: 20 HYGEVLRRYLD-------------LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
H+ ++R Y D + + ++ D K+C + + G+ H S
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
+ S+ FVG++L+ +YS L DA +VFDE++ D+V++ SII +YA G V
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV-- 211
Query: 127 AFRIASTMQDQ-RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
A + S M ++ P+ +TLV++L A LG+ G+ +H +A+ + + L
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNMFVGNCL 270
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF---------- 235
+DMY KCG + A VF M+ V SWN ++A Y G+ +A LF
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKD--VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 236 -------------------------RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
RQM+ + P+ +TL + + CA + L HGK IH
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 271 GYMIRMGVE-------PDMVACTALVDLYSKF-DVTKARKMFERL--RNKDAVIYNVMMT 320
Y I+ ++ + + L+D+Y+K V AR MF+ L + +D V + VM+
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 321 GYLKNDLPVEAINVFHEMIK--MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
GY ++ +A+ + EM + PN + A + L +R+ + IH Y LR+Q
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 379 -ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
+ ++N +I YAKCG + ARLVF+ M +++ V+WTS++TGY HG+ +EA+ +F
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF---HGKELSVNNSLITTYA 494
++R ++D VTL+ +L A S G + E F G E L+
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYA--CLVDLLG 626
Query: 495 KCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHG 528
+ G+LN A L ++M E W A L +HG
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 50/480 (10%)
Query: 174 FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
FG+ + L+ Y G + A ++ + + V WN LI +Y NG A +
Sbjct: 54 FGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLY 113
Query: 234 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS 293
LF M PD T +C E+ + G+S H + G ++ ALV +YS
Sbjct: 114 LFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYS 173
Query: 294 KF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFL 351
+ ++ ARK+F+ + D V +N ++ Y K P A+ +F M + P+ +
Sbjct: 174 RCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
N++ + L L + +H + + + I + + N ++ YAKCG + A VF+ M +
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID------------------------ 447
D+VSW +M+ GY G ++A+ LF +Q E +++D
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 448 -----------SVTLISLLQALSQLGCLSAVKEVHCLTY-------RAFHGKELSVNNSL 489
VTLIS+L + +G L KE+HC + HG E V N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 490 ITTYAKCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGNYAEVLKLFNHM--KLGNI 545
I YAKC K++ AR +F ++ ER + +W M+G Y+ HG+ + L+L + M +
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 546 KPDELTFTSILTACSHSGLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEA 604
+P+ T + L AC+ + G QI +R + VP V NC+ID+ ++ G +++A
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDA 532
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 8/280 (2%)
Query: 336 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 395
H+ IK+S+ A + + + I + IH +L +T + + + +I TY
Sbjct: 15 HQYIKVSLFSTSAPEIT-PPFIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISV 72
Query: 396 GYLQYARLVFNRMRSRD--LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 453
G L +A + R D + W S+I Y +G ++ + LF L+ + D+ T
Sbjct: 73 GCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPF 132
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
+ +A ++ + + H L+ + V N+L+ Y++C L+ AR +F +M+
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHM--KLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
+ SWN+++ +YA G L++F+ M + G +PD +T ++L C+ G G Q+
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFG-CRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 572 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+ I V NC++D+ ++ G + EA + +M
Sbjct: 252 HCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNM 290
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 302 bits (773), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 200/698 (28%), Positives = 344/698 (49%), Gaps = 15/698 (2%)
Query: 1 MNMKHPSITGNLVASCRR-RHYG-EVLRRYLDLKNSKF---SLDCSAITLCLKSCVALGR 55
M + H + T L+ C R R G V LDL++S LD A L+ C+
Sbjct: 5 MRIIHVAQTRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKND 64
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA 115
K +H D +K D F + L+ Y + G +DA +FDE+ ++ V++ ++
Sbjct: 65 PISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQG 124
Query: 116 YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG 175
YA +Y + L P+ T S L L + +H ++ G+
Sbjct: 125 YACQDPIGLYSRLH----REGHELNPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYD 178
Query: 176 VCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF 235
+ L++ Y CG V A VF + V W +++ Y+ NG ++ +L
Sbjct: 179 -SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV--WAGIVSCYVENGYFEDSLKLL 235
Query: 236 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF 295
M +P+ T A+ + L K +HG +++ D L+ LY++
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL 295
Query: 296 -DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
D++ A K+F + D V ++ M+ + +N EA+++F M + V PN +++
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV 414
+ + + L +HG V++ + + ++N +I YAKC + A +F + S++ V
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV 415
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 474
SW ++I GY + G +A +FR R + + VT S L A + L + +VH L
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 475 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 534
+ + K+++V+NSLI YAKCG + A+ +F +M + SWNA++ Y+ HG + L
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL 535
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
++ + MK + KP+ LTF +L+ CS++GL+++G + F SMIR++ I P HY C++ L
Sbjct: 536 RILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRL 595
Query: 595 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 654
L R+GQL +A L++ +P S +LSA + E A++ILK+ P++ ++Y
Sbjct: 596 LGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATY 655
Query: 655 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
VL+SN+ A +W VA IR K+ +K PG S IE
Sbjct: 656 VLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 195/687 (28%), Positives = 343/687 (49%), Gaps = 43/687 (6%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFV-- 77
H + L+ + + S D + + +C ++ L G+ +H IK + + V
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 78 GSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD- 136
G+S+I +YS+ G E A VF+E+ +D+++ +I+ +A +G AF I + MQ
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG--MFEEAFGILNQMQSV 386
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR-----RGFGVCDEIFETTLLDMYHK 191
++ P+ T+VS+ L +EGRA+HGY +R R V + + +DMY K
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV-----IDMYGK 441
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP--DLLT 249
CG A +F T + SWN +I+A+ NG +A LF++++ L T
Sbjct: 442 CGLTTQAELLF--KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLST 499
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN 309
+ + SC D L GKS+H ++ ++G DL S F + M E
Sbjct: 500 VLAILTSCDSSDSLIFGKSVHCWLQKLG------------DLTSAF--LRLETMSE---T 542
Query: 310 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARS 368
+D +N +++G + +E++ F M + + ++ L ISA +L + R
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 428
HG ++ ++ N +I Y +C ++ A VF + +L SW +I+ +
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNN 487
E LFR L+ L + +T + LL A +QLG S + HC L R F V+
Sbjct: 663 GREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF-VSA 718
Query: 488 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-IK 546
+L+ Y+ CG L +F+ +++WN+++ A+ HG + ++LF + + ++
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
P++ +F S+L+ACSHSG ++EGL ++ M ++ + P H I+D+L RAG+L EAY
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYE 838
Query: 607 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 666
+ + + LLSAC +GDT++G+ +A+ + ++EP N+S Y+ ++N G
Sbjct: 839 FITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGG 898
Query: 667 WDEVAHIRAMTKDKELKSTPGYSLIEL 693
W+E +R M +D LK PGYS+I++
Sbjct: 899 WEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 162/629 (25%), Positives = 278/629 (44%), Gaps = 63/629 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+S + E + VH ++K L D S L+ Y G+L + +FDE+ KD+
Sbjct: 94 LRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDV 153
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+ + S+ITA +G I + + TL+ A + L ++ +H
Sbjct: 154 IVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF--DSTTLLLAASALSSLHLSRKCSMLH 211
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
AI G V D L+++Y K + A VF M + SWN ++ L NG
Sbjct: 212 CLAIETGL-VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRD--IVSWNTIMTKCLANG 268
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD--MVA 284
++ + F+ M D +T + I +C+ ++ L G+S+HG +I+ G P+ +
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 285 CTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS- 342
+++ +YSK D A +FE L +D + N ++ G+ N + EA + ++M +
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK 388
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR-VEIANQIIHTYAKCGYLQYA 401
+ P++A +++ S DL R R++HGY +R + +R +E+ N +I Y KCG A
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 402 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN--LRIDSVTLISLLQALS 459
L+F RDLVSW SMI+ + +G +A LF+ + E + T++++L +
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD 508
Query: 460 QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE-RCLTSWN 518
L K VHC K G L A + M+E R LTSWN
Sbjct: 509 SSDSLIFGKSVHCW-------------------LQKLGDLTSAFLRLETMSETRDLTSWN 549
Query: 519 AMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEG--------- 568
+++ A G++ E L+ F M + G I+ D +T ++A + GLV +G
Sbjct: 550 SVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIK 609
Query: 569 -------------------LQIFRSMIREYTIV--PGEVHYNCIIDLLSRAGQLTEAYNL 607
+ S ++ + ++ P +NC+I LS+ E + L
Sbjct: 610 SLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQL 669
Query: 608 VKSMPSTHSSAALCTLLSACRLYGDTEIG 636
+++ + LLSA G T G
Sbjct: 670 FRNLKLEPNEITFVGLLSASTQLGSTSYG 698
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/627 (25%), Positives = 305/627 (48%), Gaps = 56/627 (8%)
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIIT---AYAH 118
+H +I+ L D + ++L+ LY++ L A VF + ++D+V++ +I+T A H
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
S Y F+ +M + VT ++ A + + L G ++HG I+ G+
Sbjct: 270 PRKSLQY--FK---SMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 179 EI-FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
+ +++ MY KCG + A VF ++ V S N ++ + NG EAF + Q
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEEL--VCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 238 MIH-RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC-TALVDLYSKF 295
M K+ PD+ T+ + C +L + G+++HGY +RM ++ + +++D+Y K
Sbjct: 383 MQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 296 DV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI------KMSVSPNVA 348
+ T+A +F+ ++D V +N M++ + +N +A N+F E++ K S+S +A
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Query: 349 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 408
+ + S+ S + +S+H ++ K G L A L M
Sbjct: 503 ILTSCDSSDS----LIFGKSVHCWL-------------------QKLGDLTSAFLRLETM 539
Query: 409 -RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQLGCLSA 466
+RDL SW S+I+G GH E++ F+ + RE +R D +TL+ + A LG +
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 526
+ H L ++ + + N+LIT Y +C + A +F +++ L SWN ++ A +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE-YTIVPGE 585
+ EV +LF ++KL +P+E+TF +L+A + G G+Q +IR + P
Sbjct: 660 NKAGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP-- 714
Query: 586 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI-- 643
++D+ S G L + ++ +S +A +++SA +G E + K++
Sbjct: 715 FVSAALVDMYSSCGMLETGMKVFRN-SGVNSISAWNSVISAHGFHGMGEKAMELFKELSS 773
Query: 644 -LKLEPRNSSSYVLISNILAEGGRWDE 669
++EP N SS++ + + + G DE
Sbjct: 774 NSEMEP-NKSSFISLLSACSHSGFIDE 799
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 12/402 (2%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
+S+H + ++ G+ D+ + L+ Y + ++ + +F+ L+ KD +++N M+T +N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
+ A+ +F EMI + L SA+S L R +H + + +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
N +++ YAK L A VF M RD+VSW +++T + +GH +++ F+ +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE--LSVNNSLITTYAKCGKLNMAR 503
D+VT ++ A S + L+ + +H L ++ + E +SV NS+I+ Y+KCG A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTACSHS 562
+F+++ R + S NA+L +A +G + E + N M+ + I+PD T SI + C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 563 GLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS-AAL 620
EG + +R E EV N +ID+ + G T+A L K+ +TH +
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEV-INSVIDMYGKCGLTTQAELLFKT--TTHRDLVSW 463
Query: 621 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 662
+++SA G T + + K+++ S S +S +LA
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVS---EYSCSKFSLSTVLA 502
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 34/312 (10%)
Query: 362 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 421
+ RS+H + L+ + + +++++ Y + G L + +F+ ++ +D++ W SMIT
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
+G A+ LF + + DS TL+ ALS L +HCL
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
+ S+ N+L+ YAK L+ A +F M R + SWN ++ +G+ + L+ F M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
+ D +TF+ +++ACS I E T+ GE + +I ++G
Sbjct: 282 GSGQEADTVTFSCVISACSS--------------IEELTL--GESLHGLVI----KSGYS 321
Query: 602 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 661
EA+ V + ++ ++ S C GDTE E + ++++ R+ S I N
Sbjct: 322 PEAHVSVGN--------SIISMYSKC---GDTEAAETVFEELV---CRDVISSNAILNGF 367
Query: 662 AEGGRWDEVAHI 673
A G ++E I
Sbjct: 368 AANGMFEEAFGI 379
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 297/579 (51%), Gaps = 62/579 (10%)
Query: 165 IHGYAIRRGFGVCDEIFE----------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 214
+H YA+ + +F+ LL Y K G + + F K+ +
Sbjct: 48 VHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGV--T 105
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL--LTLANAILSCAELDYLCHGKSIHGY 272
WN LI Y +G A + + M+ R +L +TL + + ++ GK IHG
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMM-RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 273 MIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYL-------- 323
+I++G E ++ + L+ +Y+ ++ A+K+F L +++ V+YN +M G L
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 324 ----------------------KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 361
+N L EAI F EM + + F +++ A L
Sbjct: 225 LQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 362 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 421
I + IH ++R + + + + +I Y KC L YA+ VF+RM+ +++VSWT+M+
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
GY G +EA+ +F +QR + D TL QA+S +S+++E FHGK
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTL---GQAISACANVSSLEEG-----SQFHGK 396
Query: 482 ELS--------VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
++ V+NSL+T Y KCG ++ + LF +M R SW AM+ AYA G E
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
++LF+ M +KPD +T T +++ACS +GLVE+G + F+ M EY IVP HY+C+ID
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 594 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 653
L SR+G+L EA + MP + TLLSACR G+ EIG+ A+ +++L+P + +
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 654 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
Y L+S+I A G+WD VA +R ++K +K PG S I+
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 6/273 (2%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E + + ++K +D L +C LG + GK++H I+ N +VGS+LI
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
+Y + L A VFD + K++V++T+++ Y +G + A +I MQ + P+
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA--EEAVKIFLDMQRSGIDPD 370
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
TL + A A + SL+EG HG AI G + +L+ +Y KCG + + +F
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
+MN SW +++AY G+A+E +LF +M+ + PD +TL I +C+
Sbjct: 430 NEMNVRDAV--SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 263 LCHGKSIHGYMI-RMGVEPDMVACTALVDLYSK 294
+ G+ M G+ P + + ++DL+S+
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 64/277 (23%)
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR---------------- 407
R + IHG ++R + N I+H YA YAR VF+R
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 408 ---------------MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE-NLRIDSVTL 451
+ RD V+W +I GY G + A+ + + R+ + + VTL
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 452 ISLLQALSQLGCLSAVKEVH--------------------------CLT--YRAFHG--- 480
+++L+ S G +S K++H C++ + F+G
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
+ + NSL+ CG + A LF+ M E+ SW AM+ A +G E ++ F M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
K+ +K D+ F S+L AC G + EG QI +IR
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 102/206 (49%), Gaps = 5/206 (2%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E ++ +LD++ S D + + +C + LE G + H +I L V +SL+
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
LY + G ++D+ R+F+E+ +D V++T++++AYA G + ++ M L P+
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE--TIQLFDKMVQHGLKPD 471
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAV 201
VTL ++ A ++ G +++G+ +G+ I + ++D++ + G ++ A
Sbjct: 472 GVTLTGVISACSRAGLVEKGQRYFKLMTSE-YGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQ 227
M +G W L++A + G
Sbjct: 531 INGMPFPPDAIG-WTTLLSACRNKGN 555
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 256/447 (57%), Gaps = 11/447 (2%)
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 314
+C + L G+ +H +MI+ P T L+ Y K D + ARK+ + + K+ V
Sbjct: 61 ACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVS 120
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
+ M++ Y + EA+ VF EM++ PN F ++++ + L + IHG ++
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 434
+ Y + + + + ++ YAK G ++ AR +F + RD+VS T++I GY G +EA+
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS----VNNSLI 490
+F L E + + VT SLL ALS L L K+ HC R +EL + NSLI
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR----RELPFYAVLQNSLI 296
Query: 491 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDE 549
Y+KCG L+ AR LF M ER SWNAML Y+ HG EVL+LF M+ +KPD
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 608
+T ++L+ CSH + + GL IF M+ EY PG HY CI+D+L RAG++ EA+ +
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 609 KSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWD 668
K MPS ++ L +LL ACR++ +IGE++ ++++++EP N+ +YV++SN+ A GRW
Sbjct: 417 KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWA 476
Query: 669 EVAHIRAMTKDKELKSTPGYSLIELDK 695
+V ++RAM K + PG S I+ ++
Sbjct: 477 DVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 168/315 (53%), Gaps = 5/315 (1%)
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
+LL+A +L++G+ +H + I+ + + T LL Y KC ++ A V +M
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRY-LPATYLRTRLLIFYGKCDCLEDARKVLDEM-- 113
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
V SW +I+ Y G + EA +F +M+ P+ T A + SC L GK
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 326
IHG +++ + + ++L+D+Y+K + +AR++FE L +D V ++ GY +
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 327 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 386
L EA+ +FH + +SPN + +L++A+S L + + H +VLR + + N
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 387 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LR 445
+I Y+KCG L YAR +F+ M R +SW +M+ GY HG E + LFRL++ E ++
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 446 IDSVTLISLLQALSQ 460
D+VTL+++L S
Sbjct: 354 PDAVTLLAVLSGCSH 368
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L +C+ L G+RVH IK ++ + L+ Y + LEDA +V DE+ K++
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V++T++I+ Y+ +G S A + + M PN T ++L + + L G+ IH
Sbjct: 119 VSWTAMISRYSQTGHSSE--ALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 167 GYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
G ++ + IF ++LLDMY K G +K A +F + V S +IA Y
Sbjct: 177 GLIVKWNYD--SHIFVGSSLLDMYAKAGQIKEAREIFECL--PERDVVSCTAIIAGYAQL 232
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
G EA E+F ++ + P+ +T A+ + + + L L HGK H +++R + V
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 286 TALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSV 343
+L+D+YSK +++ AR++F+ + + A+ +N M+ GY K+ L E + +F M + V
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR--VEIANQIIHTYAKCGYLQYA 401
P+ L ++S S R +I ++ +Y T+ E I+ + G + A
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 402 RLVFNRMRSR 411
RM S+
Sbjct: 413 FEFIKRMPSK 422
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 143/264 (54%), Gaps = 9/264 (3%)
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 412
L++A D R +R + +H ++++ +Y+ + +++ Y KC L+ AR V + M ++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 413 LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC 472
+VSWT+MI+ Y GH EA+ +F + R + + + T ++L + + L K++H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 473 LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE 532
L + + + V +SL+ YAK G++ AR +F+ + ER + S A++ YA G E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 533 VLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ----IFRSMIREYTIVPGEVHY 588
L++F+ + + P+ +T+ S+LTA S L++ G Q + R + Y ++
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL-----Q 292
Query: 589 NCIIDLLSRAGQLTEAYNLVKSMP 612
N +ID+ S+ G L+ A L +MP
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMP 316
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 143/295 (48%), Gaps = 9/295 (3%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
H E L + ++ S + L SC+ L GK++H +K N +S FVGS
Sbjct: 133 HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS 192
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
SL+ +Y++ G++++A +F+ + +D+V+ T+II YA G A + + + +
Sbjct: 193 SLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG--LDEEALEMFHRLHSEGM 250
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 199
PN VT SLL A + L L G+ H + +RR + + +L+DMY KCG + A
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCGNLSYAR 309
Query: 200 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLANAILSCA 258
+F M T SWN ++ Y +G E ELFR M ++V PD +TL + C+
Sbjct: 310 RLFDNM--PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 259 ELDYLCHGKSIHGYMI--RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK 310
G +I M+ G +P +VD+ + + +A + +R+ +K
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 283/527 (53%), Gaps = 33/527 (6%)
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 257
A VF + + ++ +NP + + + ++++ H D + + +
Sbjct: 63 ALNVFSSIPSPPESI-VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 258 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYN 316
+++ L G +HG ++ D T +D+Y+ + AR +F+ + ++D V +N
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 376
M+ Y + L EA +F EM +V P+ + N++SA ++R R+I+ +++ +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 377 --------------------------QYITRVEIANQIIHT-----YAKCGYLQYARLVF 405
++ ++ + N + T Y+KCG L A+++F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 406 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 465
++ +DLV WT+MI+ YV + EA+ +F + ++ D V++ S++ A + LG L
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 466 AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA 525
K VH + ELS+NN+LI YAKCG L+ R +F++M R + SW++M+ A +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 526 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 585
MHG ++ L LF MK N++P+E+TF +L CSHSGLVEEG +IF SM EY I P
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 586 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 645
HY C++DL RA L EA +++SMP + +L+SACR++G+ E+G+ AK+IL+
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 646 LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
LEP + + VL+SNI A RW++V +IR + ++K + G S I+
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 198/427 (46%), Gaps = 39/427 (9%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
LD + LK+ + L G +H + K+ D FV + + +Y+ G++ A V
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 98 FDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG 157
FDE++++D+V + ++I Y G V AF++ M+D + P+ + L +++ A + G
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFG--LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS--- 214
+++ RAI+ + I + D T L+ MY G + MA F KM+ + V +
Sbjct: 227 NMRYNRAIYEFLIENDVRM-DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMV 285
Query: 215 --------------------------WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
W +I+AY+ + EA +F +M + PD++
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV 345
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFE 305
++ + I +CA L L K +H + G+E ++ AL+++Y+K D T R +FE
Sbjct: 346 SMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT--RDVFE 403
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
++ ++ V ++ M+ + +A+++F M + +V PN F+ ++ S +
Sbjct: 404 KMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEE 463
Query: 366 ARSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGY 423
+ I + IT ++E ++ + + L+ A V M + ++V W S+++
Sbjct: 464 GKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC 523
Query: 424 VHHGHID 430
HG ++
Sbjct: 524 RIHGELE 530
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 26/329 (7%)
Query: 3 MKHPSITGNLVASCRRR---HYGEVLRRYL---DLKNSKFSLDCSAITLCLKSCVALGRL 56
M I N+V++C R Y + +L D++ L C+ + R
Sbjct: 209 MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR- 267
Query: 57 EFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY 116
EF +++ V ++ FV ++++ YS+ G+L+DA +FD+ KDLV +T++I+AY
Sbjct: 268 EFFRKMSVRNL--------FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 117 AHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV 176
S A R+ M + P+ V++ S++ A A LG L + + +H G
Sbjct: 320 VESDYP--QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE- 376
Query: 177 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
+ L++MY KCGG+ VF KM V SW+ +I A +G+A +A LF
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKM--PRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKF 295
+M V P+ +T + C+ + GK I M + P + +VDL+ +
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 296 DVTK-ARKMFERLRNKDAVIYNVMMTGYL 323
++ + A ++ E + V NV++ G L
Sbjct: 495 NLLREALEVIESM----PVASNVVIWGSL 519
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 301/556 (54%), Gaps = 14/556 (2%)
Query: 145 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVFG 203
L+++L A L Q+ +H I GF DE+ ++L + Y + + A + F
Sbjct: 9 ALLTILSQAKTLNHTQQ---VHAKVIIHGFE--DEVVLGSSLTNAYIQSNRLDFATSSFN 63
Query: 204 KMNATSTTVGSWNPLIAAYLHNGQAL--EAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
++ SWN +++ Y + + L+ +M D L AI +C L
Sbjct: 64 RIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLG 123
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMT 320
L +G IHG ++ G++ D +LV++Y++ + A+K+F+ + +++V++ V+M
Sbjct: 124 LLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMK 183
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
GYLK E +F M ++ + + L+ A ++ ++ + +HG +R +I
Sbjct: 184 GYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 381 RVE-IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 439
+ + + II Y KC L AR +F R++V WT++I+G+ EA LFR +
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--SLITTYAKCG 497
RE++ + TL ++L + S LG L K VH Y +G E+ N S I YA+CG
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVH--GYMIRNGIEMDAVNFTSFIDMYARCG 361
Query: 498 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 557
+ MAR +F M ER + SW++M+ A+ ++G + E L F+ MK N+ P+ +TF S+L+
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421
Query: 558 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 617
ACSHSG V+EG + F SM R+Y +VP E HY C++DLL RAG++ EA + + +MP +
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA 481
Query: 618 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 677
+A LLSACR++ + ++ IA+++L +EP SS YVL+SNI A+ G W+ V +R
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKM 541
Query: 678 KDKELKSTPGYSLIEL 693
K + G S E+
Sbjct: 542 GIKGYRKHVGQSATEV 557
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 223/416 (53%), Gaps = 9/416 (2%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y +VL Y ++ +D + +K+CV LG LE G +H ++K L+ D +V S
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPS 149
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY-AHSGGSCVYGAFRIASTMQDQRL 139
L+ +Y++ G +E A +VFDEI ++ V + ++ Y +S V FR+ M+D L
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV---FRLFCLMRDTGL 206
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 199
+ +TL+ L+ A + + + G+ +HG +IRR F + + +++DMY KC + A
Sbjct: 207 ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNAR 266
Query: 200 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
+F + V W LI+ + +A+EAF+LFRQM+ +LP+ TLA ++SC+
Sbjct: 267 KLFE--TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSS 324
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 318
L L HGKS+HGYMIR G+E D V T+ +D+Y++ ++ AR +F+ + ++ + ++ M
Sbjct: 325 LGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSM 384
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA-RSIHGYVLRHQ 377
+ + N L EA++ FH+M +V PN F++L+SA S +++ + +
Sbjct: 385 INAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYG 444
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHIDEA 432
+ E ++ + G + A+ + M + + S W ++++ H +D A
Sbjct: 445 VVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLA 500
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 234/478 (48%), Gaps = 9/478 (1%)
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT--NKDLVAYTSII 113
L ++VH I + +GSSL Y + +L+ A F+ I ++ ++ +I+
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 114 TAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG 173
+ Y+ S C + + M+ + LV + A LG L+ G IHG A++ G
Sbjct: 80 SGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNG 139
Query: 174 FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
D+ +L++MY + G ++ A VF ++ ++ + W L+ YL + E F
Sbjct: 140 LDK-DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL--WGVLMKGYLKYSKDPEVFR 196
Query: 234 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLY 292
LF M + D LTL + +C + GK +HG IR ++ +++D+Y
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
Query: 293 SKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
K + ARK+FE +++ V++ +++G+ K + VEA ++F +M++ S+ PN
Sbjct: 257 VKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLA 316
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
++ + S L +R +S+HGY++R+ I YA+CG +Q AR VF+ M R
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL-SAVKEV 470
+++SW+SMI + +G +EA+ F ++ +N+ +SVT +SLL A S G + K+
Sbjct: 377 NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQF 436
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMH 527
+T E ++ + G++ A+ M + + S W A+L A +H
Sbjct: 437 ESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 299 bits (765), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 334/673 (49%), Gaps = 47/673 (6%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D +++L + + L FG +VH +I+ L V ++L+ LY G L + F
Sbjct: 56 DQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKF 115
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM---QDQRLYPNRVT---------- 145
DEI D+ ++T++++A G + AF + M D ++ +T
Sbjct: 116 DEIDEPDVYSWTTLLSASFKLGD--IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHET 173
Query: 146 LVSLLHAAAKLG------------------SLQEGRAIHGYAIRRGFGVCDEIFETTLLD 187
V L KLG SL G+ +H I+ GF + + L+
Sbjct: 174 SVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVV-NALIT 232
Query: 188 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
MY C V A VF + + ++N +I L + E+ +FR+M+ + P
Sbjct: 233 MYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTD 291
Query: 248 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 306
LT + + SC+ G +HG I+ G E + A + +YS F D A K+FE
Sbjct: 292 LTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 307 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 366
L KD V +N M++ Y + L A++V+ M + V P+ F +L++ DL + +
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM- 407
Query: 367 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
+ +++ +++EI+N +I Y+K G ++ A L+F R ++L+SW ++I+G+ H+
Sbjct: 408 --VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN 465
Query: 427 GHIDEAIILFRLLQRENLRI--DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 484
G E + F L +RI D+ TL +LL L + H R KE
Sbjct: 466 GFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL 525
Query: 485 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LG 543
+ N+LI Y++CG + + +F QM+E+ + SWN+++ AY+ HG + + M+ G
Sbjct: 526 IGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEG 585
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
+ PD TF+++L+ACSH+GLVEEGL+IF SM+ + ++ H++C++DLL RAG L E
Sbjct: 586 KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDE 645
Query: 604 AYNLVKSMPSTHSS--AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 661
A +LVK T S L SAC +GD ++G+ +AK +++ E + S YV +SNI
Sbjct: 646 AESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIY 705
Query: 662 AEGGRWDEVAHIR 674
A G W E R
Sbjct: 706 AGAGMWKEAEETR 718
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/587 (25%), Positives = 267/587 (45%), Gaps = 39/587 (6%)
Query: 7 SITGNLVASCRRRHYGE----VLRRY--LDLKNSKFSLDCSAITLCLKSCVALGRLEFGK 60
+I ++ C+ Y E + R L +++ KF + +++C G L+FGK
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGF-ATILSMC-----DYGSLDFGK 209
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDE--ITNKDLVAYTSIITAYAH 118
+VH IK V ++LI +Y + DA VF+E + +D V + +I A
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG 269
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
FR M + L P +T VS++ + + G +HG AI+ G+
Sbjct: 270 FKRDESLLVFR---KMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYT 323
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
+ T + MY A VF + +WN +I++Y A ++++M
Sbjct: 324 LVSNAT-MTMYSSFEDFGAAHKVFESLEEKDLV--TWNTMISSYNQAKLGKSAMSVYKRM 380
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDV 297
V PD T + + + +LD L + + +I+ G+ + AL+ YSK +
Sbjct: 381 HIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQI 437
Query: 298 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS--PNVALFLNLIS 355
KA +FER K+ + +N +++G+ N P E + F +++ V P+ L+S
Sbjct: 438 EKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLS 497
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
+ L H YVLRH I N +I+ Y++CG +Q + VFN+M +D+VS
Sbjct: 498 ICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVS 557
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRI-DSVTLISLLQALSQLGCLSAVKEVHCLT 474
W S+I+ Y HG + A+ ++ +Q E I D+ T ++L A S G + E+ +
Sbjct: 558 WNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFN-S 616
Query: 475 YRAFHGKELSVN--NSLITTYAKCGKLNMARYLFQQMTERCLTS----WNAMLGAYAMHG 528
FHG +V+ + L+ + G L+ A L +++E+ + S W A+ A A HG
Sbjct: 617 MVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV-KISEKTIGSRVDVWWALFSACAAHG 675
Query: 529 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 575
+ ++ K+ + + K D + + + +G+ +E + R++
Sbjct: 676 DL-KLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAI 721
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 150/610 (24%), Positives = 250/610 (40%), Gaps = 96/610 (15%)
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC--------------------- 177
L P++ ++ + A L G +H YAIR G +C
Sbjct: 53 LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGL-LCHSHVSNTLLSLYERLGNLASL 111
Query: 178 ----DEIFE------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 227
DEI E TTLL K G ++ A VF KM V WN +I +G
Sbjct: 112 KKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKM-PERDDVAIWNAMITGCKESGY 170
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
+ ELFR+M V D A ILS + L GK +H +I+ G A
Sbjct: 171 HETSVELFREMHKLGVRHDKFGFAT-ILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNA 229
Query: 288 LVDLYSKFD-VTKARKMFER--LRNKDAVIYNVMMTGY--LKNDLPVEAINVFHEMIKMS 342
L+ +Y V A +FE + +D V +NV++ G K D E++ VF +M++ S
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD---ESLLVFRKMLEAS 286
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
+ P F++++ + S + +HG ++ Y ++N + Y+ A
Sbjct: 287 LRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAH 343
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
VF + +DLV+W +MI+ Y A+ +++ + ++ D T SLL L
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
L V+ C+ K + ++N+LI+ Y+K G++ A LF++ + L SWNA++
Sbjct: 404 VLEMVQA--CIIKFGLSSK-IEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIIS 460
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIK--PDELTFTSILTAC--------------------- 559
+ +G E L+ F+ + ++ PD T +++L+ C
Sbjct: 461 GFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ 520
Query: 560 --------------SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 605
S G ++ L++F M + V +N +I SR G+ A
Sbjct: 521 FKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV-----VSWNSLISAYSRHGEGENAV 575
Query: 606 NLVKSMPST----HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEP--RNSSSYVLISN 659
N K+M +A +LSAC G E G I +++ RN + + +
Sbjct: 576 NTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVD 635
Query: 660 ILAEGGRWDE 669
+L G DE
Sbjct: 636 LLGRAGHLDE 645
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 261/492 (53%), Gaps = 5/492 (1%)
Query: 206 NATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 263
N+ V S WN + + E+ L+R M+ PD + + SCA L
Sbjct: 10 NSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 69
Query: 264 CHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFER--LRNKDAVIYNVMMT 320
G+ +H ++ + G E + TAL+ +Y K V ARK+FE ++ +V YN +++
Sbjct: 70 VSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
GY N +A +F M + VS + L L+ + + L RS+HG ++ +
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 440
V + N I Y KCG ++ R +F+ M + L++W ++I+GY +G + + L+ ++
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ D TL+S+L + + LG EV L + V+N+ I+ YA+CG L
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Query: 501 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 560
AR +F M + L SW AM+G Y MHG L LF+ M I+PD F +L+ACS
Sbjct: 310 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 561 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
HSGL ++GL++FR+M REY + PG HY+C++DLL RAG+L EA ++SMP A
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 621 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 680
LL AC+++ + ++ E ++++ EP N YVL+SNI ++ + + IR M +++
Sbjct: 430 GALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 489
Query: 681 ELKSTPGYSLIE 692
+ PGYS +E
Sbjct: 490 AFRKKPGYSYVE 501
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 209/441 (47%), Gaps = 6/441 (1%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ + +L + A L G+ +H + + G + T L+ MY KCG V A
Sbjct: 51 PDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCET-EPFVLTALISMYCKCGLVADARK 109
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
VF + +S +N LI+ Y N + +A +FR+M V D +T+ + C
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVP 169
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 319
+YL G+S+HG ++ G++ ++ + + +Y K V R++F+ + K + +N ++
Sbjct: 170 EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 379
+GY +N L + + ++ +M V P+ ++++S+ + L ++ + V + ++
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 439
V ++N I YA+CG L AR VF+ M + LVSWT+MI Y HG + ++LF +
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS-LITTYAKCGK 498
+ +R D + +L A S G E+ R + + + S L+ + G+
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 499 LNMARYLFQQM-TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 557
L+ A + M E W A+LGA +H N F K+ +P+ + + +++
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF--AKVIEFEPNNIGYYVLMS 467
Query: 558 ACSHSGLVEEGLQIFRSMIRE 578
+EG+ R M+RE
Sbjct: 468 NIYSDSKNQEGIWRIRVMMRE 488
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 167/341 (48%), Gaps = 8/341 (2%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+ E + Y + S S D + LKSC +L G+++H K ++ FV ++
Sbjct: 34 FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA 93
Query: 81 LIRLYSEYGKLEDAHRVFDE--ITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
LI +Y + G + DA +VF+E +++ V Y ++I+ Y + S V A + M++
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGY--TANSKVTDAAYMFRRMKETG 151
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
+ + VT++ L+ L GR++HG ++ G + + + MY KCG V+
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL-NSFITMYMKCGSVEAG 210
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F +M +WN +I+ Y NG A + EL+ QM V PD TL + + SCA
Sbjct: 211 RRLFDEMPVKGLI--TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 317
L G + + G P++ A + +Y++ ++ KAR +F+ + K V +
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
M+ Y + + + +F +MIK + P+ A+F+ ++SA S
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 6/265 (2%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
+K + S+D + + C L G+ +H +K L+S+ V +S I +Y + G
Sbjct: 147 MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGS 206
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
+E R+FDE+ K L+ + ++I+ Y+ +G Y + M+ + P+ TLVS+L
Sbjct: 207 VEAGRRLFDEMPVKGLITWNAVISGYSQNG--LAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
+ A LG+ + G + GF V + + MY +CG + A AVF M S
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGF-VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSL 323
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
SW +I Y +G LF MI R + PD + +C+ G +
Sbjct: 324 V--SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 271 GYMIR-MGVEPDMVACTALVDLYSK 294
M R +EP + LVDL +
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGR 406
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 305/590 (51%), Gaps = 47/590 (7%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
PN+ T LL + AKLG + +GR +H ++ GF V D T L+ MY K V A
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFV-DVFTATALVSMYMKVKQVTDALK 87
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
V +M + S N ++ L NG +AF +F + +T+A+ + C ++
Sbjct: 88 VLDEM--PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI 145
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 319
+ G +H ++ G E ++ T+LV +YS+ + A +MFE++ +K V YN +
Sbjct: 146 E---GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
+G ++N + +VF+ M K S PN F+N I+A + L +++ R +HG V++ ++
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEAIILFR 437
+ +I Y+KC + A +VF ++ +R+L+SW S+I+G + +G + A+ LF
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 438 LLQRENLRIDSVTLISLLQALSQLG----------------------CLSAV-------- 467
L E L+ DS T SL+ SQLG CL+++
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 468 -----KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS--WNAM 520
KE+H +A +++ V SLI Y KCG + AR +F + + WN M
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVM 442
Query: 521 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 580
+ Y HG +++F ++ ++P TFT++L+ACSH G VE+G QIFR M EY
Sbjct: 443 ISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYG 502
Query: 581 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 640
P H C+IDLL R+G+L EA ++ M S SS+ +LL +CR + D +GE A
Sbjct: 503 YKPSTEHIGCMIDLLGRSGRLREAKEVIDQM-SEPSSSVYSSLLGSCRQHLDPVLGEEAA 561
Query: 641 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSL 690
++ +LEP N + +V++S+I A RW++V IR + K+L PG SL
Sbjct: 562 MKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 279/584 (47%), Gaps = 59/584 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
LKSC LG + G+ +H +K D F ++L+ +Y + ++ DA +V DE+ + +
Sbjct: 38 LKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGI 97
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+ + ++ +G AFR+ + N VT+ S+L G ++ G +H
Sbjct: 98 ASVNAAVSGLLENG--FCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLH 152
Query: 167 GYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
A++ GF + E++ T+L+ MY +CG +AA +F K+ S V ++N I+ + N
Sbjct: 153 CLAMKSGFEM--EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS--VVTYNAFISGLMEN 208
Query: 226 GQ---ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 282
G F L R+ + P+ +T NAI +CA L L +G+ +HG +++ + +
Sbjct: 209 GVMNLVPSVFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 283 VACTALVDLYSKFDVTK---------------------------------ARKMFERLRN 309
+ TAL+D+YSK K A ++FE+L +
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 310 K----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
+ D+ +N +++G+ + +EA F M+ + + P++ +L+SA SD+ ++
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKN 386
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM--RSRDLVSWTSMITGY 423
+ IHG+V++ + + +I Y KCG +AR +F+R + +D V W MI+GY
Sbjct: 387 GKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGY 446
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL 483
HG + AI +F LL+ E + T ++L A S G + ++ L + K
Sbjct: 447 GKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPS 506
Query: 484 SVN-NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
+ + +I + G+L A+ + QM+E + ++++LG+ H + VL MKL
Sbjct: 507 TEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLD--PVLGEEAAMKL 564
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV--PG 584
++P+ IL++ + E ++ R +I + +V PG
Sbjct: 565 AELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPG 608
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 211/431 (48%), Gaps = 57/431 (13%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
+ R + D + S ++ + L C G +E G ++H ++K + +VG+SL+
Sbjct: 115 DAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLV 171
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYP 141
+YS G+ A R+F+++ +K +V Y + I+ +G + V F + + P
Sbjct: 172 SMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE--P 229
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
N VT V+ + A A L +LQ GR +HG +++ F + + T L+DMY KC K A V
Sbjct: 230 NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF-ETMVGTALIDMYSKCRCWKSAYIV 288
Query: 202 FGKMNATSTTV----------------------------------GSWNPLIAAYLHNGQ 227
F ++ T + +WN LI+ + G+
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
+EAF+ F +M+ ++P L L + + +C+++ L +GK IHG++I+ E D+ T+
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 288 LVDLYSKFDVTK-ARKMFERL--RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 344
L+D+Y K ++ AR++F+R + KD V +NVM++GY K+ AI +F + + V
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 345 PNVALFLNLISAVSDLRDI-------RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 397
P++A F ++SA S ++ RL + +GY ++I +I + G
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI------GCMIDLLGRSGR 522
Query: 398 LQYARLVFNRM 408
L+ A+ V ++M
Sbjct: 523 LREAKEVIDQM 533
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 158/326 (48%), Gaps = 13/326 (3%)
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
+S SPN F L+ + + L D+ R +H V++ + V A ++ Y K +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
A V + M R + S + ++G + +G +A +F + ++SVT+ S+L
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC-- 142
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 520
G + ++HCL ++ E+ V SL++ Y++CG+ +A +F+++ + + ++NA
Sbjct: 143 -GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 521 LGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR-- 577
+ +G V +FN M K + +P+++TF + +TAC+ ++ G Q+ +++
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 578 -EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIG 636
++ + G +ID+ S+ AY + + T + + +++S + G E
Sbjct: 262 FQFETMVG----TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
Query: 637 EAIAKQILK--LEPRNSSSYVLISNI 660
+ +++ L+P +++ LIS
Sbjct: 318 VELFEKLDSEGLKPDSATWNSLISGF 343
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 298/536 (55%), Gaps = 8/536 (1%)
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 222
+ I + ++ GF EI + L+D KCG + A VF M + + +WN LIA
Sbjct: 85 KTIQAHMLKSGFPA--EISGSKLVDASLKCGDIDYARQVFDGM--SERHIVTWNSLIAYL 140
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PD 281
+ + ++ EA E++R MI VLPD TL++ + ++L + HG + +G+E +
Sbjct: 141 IKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSN 200
Query: 282 MVACTALVDLYSKFDVTKARKM-FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
+ +ALVD+Y KF T+ K+ +R+ KD V+ ++ GY + EA+ F M+
Sbjct: 201 VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLV 260
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
V PN + +++ + +L+DI + IHG +++ + + + ++ Y +C +
Sbjct: 261 EKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDD 320
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
+ VF + + VSWTS+I+G V +G + A+I FR + R++++ +S TL S L+ S
Sbjct: 321 SLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSN 380
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 520
L +++H + + ++ + LI Y KCG +MAR +F ++E + S N M
Sbjct: 381 LAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTM 440
Query: 521 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 580
+ +YA +G E L LF M ++P+++T S+L AC++S LVEEG ++F S ++
Sbjct: 441 IYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKI 500
Query: 581 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 640
++ + HY C++DLL RAG+L EA L + + TLLSAC+++ E+ E I
Sbjct: 501 MLTND-HYACMVDLLGRAGRLEEAEMLTTEVINP-DLVLWRTLLSACKVHRKVEMAERIT 558
Query: 641 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
++IL++EP + + +L+SN+ A G+W+ V +++ KD +LK P S +E++K+
Sbjct: 559 RKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKE 614
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 187/376 (49%), Gaps = 7/376 (1%)
Query: 59 GKRVHVDSIKLNLN-SDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA 117
+R H ++ L L S+ FVGS+L+ +Y ++GK +A V D + KD+V T++I Y+
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 118 HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC 177
G A + +M +++ PN T S+L + L + G+ IHG ++ GF
Sbjct: 244 QKGEDT--EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 178 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
+T+LL MY +C V + VF + + SW LI+ + NG+ A FR+
Sbjct: 302 -LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV--SWTSLISGLVQNGREEMALIEFRK 358
Query: 238 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV 297
M+ + P+ TL++A+ C+ L G+ IHG + + G + D A + L+DLY K
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 298 TK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+ AR +F+ L D + N M+ Y +N EA+++F MI + + PN L+++ A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
Query: 357 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 416
++ R + + + + + + ++ + G L+ A ++ + + DLV W
Sbjct: 479 CNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLW 538
Query: 417 TSMITGYVHHGHIDEA 432
++++ H ++ A
Sbjct: 539 RTLLSACKVHRKVEMA 554
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+ C L E G+++H K + D + GS LI LY + G + A VFD ++ D+
Sbjct: 375 LRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDV 434
Query: 107 VAYTSIITAYAHSGGSCVYG--AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
++ ++I +YA +G +G A + M + L PN VT++S+L A ++EG
Sbjct: 435 ISLNTMIYSYAQNG----FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/623 (27%), Positives = 312/623 (50%), Gaps = 9/623 (1%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM--QD 136
+++I + + G + A +FD + ++ +V +T ++ YA + S AF++ M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARN--SHFDEAFKLFRQMCRSS 140
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGV 195
P+ VT +LL +H +A++ GF + LL Y + +
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+A +F ++ + ++N LI Y +G E+ LF +M P T + +
Sbjct: 201 DLACVLFEEIPEKDSV--TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 314
+ L G+ +H + G D ++D YSK D V + R +F+ + D V
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
YNV+++ Y + D +++ F EM M F ++S ++L +++ R +H L
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 434
+ + + N ++ YAKC + A L+F + R VSWT++I+GYV G +
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 494
LF ++ NLR D T ++L+A + L K++H R+ + + + + L+ YA
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 495 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 554
KCG + A +F++M +R SWNA++ A+A +G+ + F M ++PD ++
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 555 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 614
+LTACSH G VE+G + F++M Y I P + HY C++DLL R G+ EA L+ MP
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 615 HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEP-RNSSSYVLISNILAEGGRWDEVAHI 673
++L+ACR++ + + E A+++ +E R++++YV +SNI A G W++V +
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 674 RAMTKDKELKSTPGYSLIELDKQ 696
+ +++ +K P YS +E++ +
Sbjct: 679 KKAMRERGIKKVPAYSWVEVNHK 701
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+G L+ + ++ S D S LK+ + L GK++H I+ + F GS
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRL 139
L+ +Y++ G ++DA +VF+E+ +++ V++ ++I+A+A +G G GAF + M + L
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF---AKMIESGL 549
Query: 140 YPNRVTLVSLLHAAAKLGSLQEG-------RAIHGYAIRRGFGVCDEIFETTLLDMYHKC 192
P+ V+++ +L A + G +++G I+G ++ C +LD+ +
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC-------MLDLLGRN 602
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQAL 229
G A + +M + + L A +H Q+L
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSL 639
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 278/500 (55%), Gaps = 10/500 (2%)
Query: 210 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 269
T V SWN +IA +G + EA F M + P + AI +C+ L + GK
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 270 HGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 328
H G + D+ +AL+ +YS + ARK+F+ + ++ V + M+ GY N
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 329 VEAINVFHEMIKMSVSPNVALFLN------LISAVSDLRDIRLARSIHGYVLRHQYITRV 382
++A+++F +++ + A+FL+ +ISA S + L SIH +V++ + V
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 383 EIANQIIHTYAKCGY--LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR-LL 439
+ N ++ YAK G + AR +F+++ +D VS+ S+++ Y G +EA +FR L+
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 499
+ + + +++TL ++L A+S G L K +H R ++ V S+I Y KCG++
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 500 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
AR F +M + + SW AM+ Y MHG+ A+ L+LF M ++P+ +TF S+L AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
SH+GL EG + F +M + + PG HY C++DLL RAG L +AY+L++ M S
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 620 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 679
+LL+ACR++ + E+ E ++ +L+ N Y+L+S+I A+ GRW +V +R + K+
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 680 KELKSTPGYSLIELDKQREV 699
+ L PG+SL+EL+ + V
Sbjct: 519 RGLVKPPGFSLLELNGEVHV 538
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 230/430 (53%), Gaps = 29/430 (6%)
Query: 27 RYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYS 86
R L L ++ S C+ +K+C +L + GK+ H + SD FV S+LI +YS
Sbjct: 68 RKLSLYPTRSSFPCA-----IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYS 122
Query: 87 EYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGS----CVYGAFRIASTMQDQRLYPN 142
GKLEDA +VFDEI +++V++TS+I Y +G + ++ + D ++ +
Sbjct: 123 TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF--GVCDEIFETTLLDMYHKC--GGVKMA 198
+ LVS++ A +++ + +IH + I+RGF GV TLLD Y K GGV +A
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS---VGNTLLDAYAKGGEGGVAVA 239
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSC 257
+F ++ S+N +++ Y +G + EAFE+FR+++ KV+ + +TL+ +L+
Sbjct: 240 RKIFDQIVDKDRV--SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 258 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYN 316
+ L GK IH +IRMG+E D++ T+++D+Y K V ARK F+R++NK+ +
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS----DLRDIRLARSIHGY 372
M+ GY + +A+ +F MI V PN F+++++A S + R ++ G
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG- 416
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDE 431
R +E ++ + G+LQ A + RM+ + D + W+S++ H +++
Sbjct: 417 --RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVEL 474
Query: 432 A-IILFRLLQ 440
A I + RL +
Sbjct: 475 AEISVARLFE 484
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 269/525 (51%), Gaps = 37/525 (7%)
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
S V +W +I + +A F +M PD + + SC + L G+S
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSK---------------------------------- 294
+HG+++R+G++ D+ AL+++Y+K
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 295 ---FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
F + R++FE + KD V YN ++ GY ++ + +A+ + EM + P+
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
+++ S+ D+ + IHGYV+R + V I + ++ YAK ++ + VF+R+ R
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
D +SW S++ GYV +G +EA+ LFR + ++ +V S++ A + L L K++H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 531
R G + + ++L+ Y+KCG + AR +F +M SW A++ +A+HG+
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGH 426
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
E + LF MK +KP+++ F ++LTACSH GLV+E F SM + Y + HY +
Sbjct: 427 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486
Query: 592 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 651
DLL RAG+L EAYN + M + + TLLS+C ++ + E+ E +A++I ++ N
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546
Query: 652 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+YVL+ N+ A GRW E+A +R + K L+ P S IE+ +
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNK 591
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 224/458 (48%), Gaps = 58/458 (12%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+ + L +++++ S D + LKSC + L FG+ VH ++L ++ D + G++
Sbjct: 86 FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 81 LIRLYSE-------------------------------------YGKLEDAHRVFDEITN 103
L+ +Y++ +G ++ RVF+ +
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPR 204
Query: 104 KDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGR 163
KD+V+Y +II YA SG A R+ M L P+ TL S+L ++ + +G+
Sbjct: 205 KDVVSYNTIIAGYAQSG--MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 164 AIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
IHGY IR+G D ++L+DMY K ++ + VF ++ SWN L+A Y+
Sbjct: 263 EIHGYVIRKGID-SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI--SWNSLVAGYV 319
Query: 224 HNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV 283
NG+ EA LFRQM+ KV P + ++ I +CA L L GK +HGY++R G ++
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 284 ACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
+ALVD+YSK ++ ARK+F+R+ D V + ++ G+ + EA+++F EM +
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA-------KC 395
V PN F+ +++A S + L GY +T+V NQ + YA +
Sbjct: 440 VKPNQVAFVAVLTACS---HVGLVDEAWGYF---NSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 396 GYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHIDEA 432
G L+ A ++M S W+++++ H +++ A
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELA 531
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 128/299 (42%), Gaps = 40/299 (13%)
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
+S + AL LI + ++ A+ +H +R Q ++ A+ +I Y L A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEAL 59
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
L+F ++S +++W S+I + +A+ F ++ D S+L++ + +
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK---------CGK--------------- 498
L + VH R +L N+L+ YAK G
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 499 ------------LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
++ R +F+ M + + S+N ++ YA G Y + L++ M ++K
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY-NCIIDLLSRAGQLTEA 604
PD T +S+L S V +G +I +IR+ + +V+ + ++D+ +++ ++ ++
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG--IDSDVYIGSSLVDMYAKSARIEDS 296
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 278/552 (50%), Gaps = 7/552 (1%)
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
LL A S++ GR +H ++ L++MY K + A V A
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
+ V SW LI+ NG A F +M V+P+ T A + A L GK
Sbjct: 72 N--VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 269 IHGYMIRMGVEPDM-VACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKND 326
IH ++ G D+ V C+A D+Y K + ARK+F+ + ++ +N ++ + +
Sbjct: 130 IHALAVKCGRILDVFVGCSAF-DMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 327 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 386
P EAI F E ++ PN F ++A SD + L +HG VLR + T V + N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 387 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 446
+I Y KC ++ + ++F M +++ VSW S++ YV + ++A +L+ +++ +
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
+ S+L A + + L + +H +A + + V ++L+ Y KCG + + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 507 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM--KLGNIKPDELTFTSILTACSHSGL 564
+M E+ L + N+++G YA G L LF M + P+ +TF S+L+ACS +G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
VE G++IF SM Y I PG HY+CI+D+L RAG + AY +K MP + + L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 625 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 684
+ACR++G ++G A+ + KL+P++S ++VL+SN A GRW E +R K +K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 685 TPGYSLIELDKQ 696
GYS I + Q
Sbjct: 549 GAGYSWITVKNQ 560
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 235/500 (47%), Gaps = 17/500 (3%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIK-LNLNSDCFVGSSLIRLYSEYGKLEDAHR 96
L A+ L LK+ ++ + G+ VH +K L+ F+ + LI +YS+ E A
Sbjct: 4 LSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 97 VFDEITNKDLVAYTSIITAYAHSG--GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAA 154
V +++V++TS+I+ A +G + + F M+ + + PN T A A
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE----MRREGVVPNDFTFPCAFKAVA 119
Query: 155 KLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 214
L G+ IH A++ G + D + DMY K A +F ++ + +
Sbjct: 120 SLRLPVTGKQIHALAVKCG-RILDVFVGCSAFDMYCKTRLRDDARKLFDEI--PERNLET 176
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN I+ + +G+ EA E F + P+ +T + +C++ +L G +HG ++
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 275 RMGVEPDMVACTALVDLYSKFDVTKARK-MFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
R G + D+ C L+D Y K ++ + +F + K+AV + ++ Y++N +A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
++ K V + + +++SA + + + L RSIH + ++ + + + ++ Y
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 394 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL--RIDSVTL 451
KCG ++ + F+ M ++LV+ S+I GY H G +D A+ LF + + +T
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 452 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NSLITTYAKCGKLNMARYLFQQM 509
+SLL A S+ G + ++ + R+ +G E + ++ + G + A ++M
Sbjct: 417 VSLLSACSRAGAVENGMKIF-DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 475
Query: 510 T-ERCLTSWNAMLGAYAMHG 528
+ ++ W A+ A MHG
Sbjct: 476 PIQPTISVWGALQNACRMHG 495
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 163/346 (47%), Gaps = 16/346 (4%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
H+ L + +++ + K+ +L GK++H ++K D FVG
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFR--IASTMQDQ 137
S +Y + +DA ++FDEI ++L + + I+ S G R I + ++ +
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS------NSVTDGRPREAIEAFIEFR 201
Query: 138 RL--YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
R+ +PN +T + L+A + L G +HG +R GF D L+D Y KC +
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT-DVSVCNGLIDFYGKCKQI 260
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+ + +F +M + SW L+AAY+ N + +A L+ + V +++ +
Sbjct: 261 RSSEIIFTEMGTKNAV--SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 314
+CA + L G+SIH + ++ VE + +ALVD+Y K + + + F+ + K+ V
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSV--SPNVALFLNLISAVS 358
N ++ GY A+ +F EM +PN F++L+SA S
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT 102
I+ L +C + LE G+ +H ++K + FVGS+L+ +Y + G +ED+ + FDE+
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 103 NKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
K+LV S+I YAH G + A + PN +T VSLL A ++ G+++ G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 163 RAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 221
I ++R +G+ + ++DM + G V+ A KM T+ W L A
Sbjct: 433 MKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM-PIQPTISVWGALQNA 490
Query: 222 YLHNGQA----LEAFELFR 236
+G+ L A LF+
Sbjct: 491 CRMHGKPQLGLLAAENLFK 509
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/692 (27%), Positives = 344/692 (49%), Gaps = 19/692 (2%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLD-LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVD 65
SI ++ S RR L + + L+ F +TLCL G L+ G ++H
Sbjct: 42 SINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGF 101
Query: 66 SIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVY 125
S S V ++++ +Y + G+ ++A +F+ + + D+V++ +I++ + +
Sbjct: 102 STTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN-----Q 156
Query: 126 GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
A M+ + + T + L G + ++ G D + +
Sbjct: 157 IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL-ESDLVVGNSF 215
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ-ALEAFELFRQMIHRKVL 244
+ MY + G + A VF +M+ SWN L++ G EA +FR M+ V
Sbjct: 216 ITMYSRSGSFRGARRVFDEMSFKDMI--SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 245 PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARK-M 303
D ++ + I +C L + IHG I+ G E + L+ YSK V +A K +
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSV 333
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
F ++ ++ V + M++ K+D A+++F M V PN F+ LI+AV I
Sbjct: 334 FHQMSERNVVSWTTMISSN-KDD----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI 388
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 423
+ IHG ++ +++ + N I YAK L+ A+ F + R+++SW +MI+G+
Sbjct: 389 KEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGF 448
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL 483
+G EA+ +F E + + T S+L A++ +S + C + G
Sbjct: 449 AQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS 507
Query: 484 S--VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
V+++L+ YAK G ++ + +F +M+++ W +++ AY+ HG++ V+ LF+ M
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMI 567
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
N+ PD +TF S+LTAC+ G+V++G +IF MI Y + P HY+C++D+L RAG+L
Sbjct: 568 KENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRL 627
Query: 602 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 661
EA L+ +P + L ++L +CRL+G+ ++G +A+ ++++P S SYV + NI
Sbjct: 628 KEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIY 687
Query: 662 AEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
AE WD+ A IR + K + G+S I++
Sbjct: 688 AEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/653 (28%), Positives = 313/653 (47%), Gaps = 77/653 (11%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+ C G +E GK +H IKL ++S V +S++ +Y++ G+L+ A + F + +D+
Sbjct: 188 LQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV 247
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+A+ S++ AY +G A + M+ + + P VT L+ +LG
Sbjct: 248 IAWNSVLLAYCQNGKH--EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK-------- 297
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
CD +D+ K + A VF +W +I+ +HNG
Sbjct: 298 ----------CD-----AAMDLMQKMETFGITADVF-----------TWTAMISGLIHNG 331
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT 286
+A ++FR+M V+P+ +T+ +A+ +C+ L + G +H ++MG D++
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 287 ALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 345
+LVD+YSK + ARK+F+ ++NKD +N M+TGY + +A +F M ++ P
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 346 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 405
N+ + N +I Y K G A +F
Sbjct: 452 NIITW-----------------------------------NTMISGYIKNGDEGEAMDLF 476
Query: 406 NRMR-----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
RM R+ +W +I GY+ +G DEA+ LFR +Q +SVT++SLL A +
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 520
L V+E+H R +V N+L TYAK G + +R +F M + + +WN++
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSL 596
Query: 521 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 580
+G Y +HG+Y L LFN MK I P+ T +SI+ A G V+EG ++F S+ +Y
Sbjct: 597 IGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH 656
Query: 581 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 640
I+P H + ++ L RA +L EA ++ M + + L+ CR++GD ++ A
Sbjct: 657 IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAA 716
Query: 641 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
+ + LEP N+++ ++S I A G + +D LK G S IE+
Sbjct: 717 ENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEV 769
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 237/524 (45%), Gaps = 84/524 (16%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+SC+ G + G+ +H L D FV + L+ +Y++ G + DA +VFD + ++L
Sbjct: 88 LESCIDSGSIHLGRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 107 VAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
++++I AY+ V FR+ M + P+ +L A G ++ G+ I
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRL---MMKDGVLPDDFLFPKILQGCANCGDVEAGKVI 203
Query: 166 HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
H I+ G C + ++L +Y KCG + A F +M V +WN ++ AY N
Sbjct: 204 HSVVIKLGMSSCLRV-SNSILAVYAKCGELDFATKFFRRMRERD--VIAWNSVLLAYCQN 260
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
G+ EA EL ++M + P L+T + I +G + C
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVT----------------------WNILIGGYNQLGKC 298
Query: 286 TALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
A +DL K F +T D + M++G + N + +A+++F +M
Sbjct: 299 DAAMDLMQKMETFGIT-----------ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
V PN ++ +SA S L+ I +H ++ +I V + N ++ Y+KCG L+ AR
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
VF+ ++++D+ +W SMITGY G+ +A LF +Q NLR + +T
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW----------- 456
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-----TERCLTSW 517
N++I+ Y K G A LFQ+M +R +W
Sbjct: 457 ------------------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 561
N ++ Y +G E L+LF M+ P+ +T S+L AC++
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 234/494 (47%), Gaps = 49/494 (9%)
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAV 201
R T + LL + GS+ GR +H R G ++F ET LL MY KCG + A V
Sbjct: 81 RSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKV 137
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F M + +W+ +I AY + E +LFR M+ VLPD + CA
Sbjct: 138 FDSMR--ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG 195
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 320
+ GK IH +I++G+ + +++ +Y+K ++ A K F R+R +D + +N ++
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
Y +N EA+ + EM K +SP + +
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTW------------------------------ 285
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILF 436
N +I Y + G A + +M + D+ +WT+MI+G +H+G +A+ +F
Sbjct: 286 -----NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
R + + ++VT++S + A S L ++ EVH + + ++ V NSL+ Y+KC
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
GKL AR +F + + + +WN+M+ Y G + +LF M+ N++P+ +T+ +++
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH- 615
+ +G E + +F+ M ++ + +N II + G+ EA L + M +
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 616 --SSAALCTLLSAC 627
+S + +LL AC
Sbjct: 521 MPNSVTILSLLPAC 534
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 213/433 (49%), Gaps = 50/433 (11%)
Query: 41 SAITL--CLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
+A+T+ + +C L + G VH ++K+ D VG+SL+ +YS+ GKLEDA +VF
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
D + NKD+ + S+IT Y +G A+ + + MQD L PN +T +++ K G
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAG--YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG- 467
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
EG A+ ++F+ D GK+ + T WN +
Sbjct: 468 -DEGEAM-------------DLFQRMEKD---------------GKVQRNTAT---WNLI 495
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 278
IA Y+ NG+ EA ELFR+M + +P+ +T+ + + +CA L + IHG ++R +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 279 EPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
+ AL D Y+K D+ +R +F + KD + +N ++ GY+ + A+ +F++
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQ 615
Query: 338 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY--ITRVEIANQIIHTYAKC 395
M ++PN ++I A + ++ + + Y + + Y I +E + +++ Y +
Sbjct: 616 MKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 396 GYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEAI----ILFRLLQRENLRIDSVT 450
L+ A M + W S +TG HG ID AI LF L+ EN +S+
Sbjct: 675 NRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS-LEPENTATESI- 732
Query: 451 LISLLQAL-SQLG 462
+S + AL ++LG
Sbjct: 733 -VSQIYALGAKLG 744
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 213/476 (44%), Gaps = 48/476 (10%)
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV--EPDM 282
NG LEA + + + T + SC + + G+ +H R G+ EPD+
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDV 115
Query: 283 VACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
T L+ +Y+K + ARK+F+ +R ++ ++ M+ Y + + E +F M+K
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
V P+ LF ++ ++ D+ + IH V++ + + ++N I+ YAKCG L +A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 402 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 461
F RMR RD+++W S++ Y +G +EA+ L + +++E + VT
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW---------- 285
Query: 462 GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SW 517
N LI Y + GK + A L Q+M +T +W
Sbjct: 286 -------------------------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
AM+ +G + L +F M L + P+ +T S ++ACS ++ +G ++ S+
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAV 379
Query: 578 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 637
+ + + N ++D+ S+ G+L +A + S+ + + C+ + E
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 638 AIAK-QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL-KSTPGYSLI 691
+ Q L P + +IS + G + + + M KD ++ ++T ++LI
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 6/305 (1%)
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR-- 381
+N +EA + + + +L L+ + D I L R +H R T
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
V + +++ YAKCG + AR VF+ MR R+L +W++MI Y E LFRL+ +
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 442 ENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 501
+ + D +LQ + G + A K +H + + L V+NS++ YAKCG+L+
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 502 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 561
A F++M ER + +WN++L AY +G + E ++L M+ I P +T+ ++ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 562 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC 621
G + + + + M + I + +I L G +A ++ + M
Sbjct: 295 LGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 622 TLLSA 626
T++SA
Sbjct: 354 TIMSA 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L + ++ S+F + I L +C L + + +H ++ NL++ V ++L
Sbjct: 507 EALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALT 566
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG-AFRIASTMQDQRLYP 141
Y++ G +E + +F + KD++ + S+I Y G YG A + + M+ Q + P
Sbjct: 567 DTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS---YGPALALFNQMKTQGITP 623
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAA 200
NR TL S++ A +G++ EG+ + Y+I + + + + ++ +Y + ++ A
Sbjct: 624 NRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQ 682
Query: 201 VFGKMNATSTTVGSWNPLIAAYL 223
+MN S T P+ ++L
Sbjct: 683 FIQEMNIQSET-----PIWESFL 700
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 251/435 (57%), Gaps = 8/435 (1%)
Query: 267 KSIHGYMIRMGV-----EPDMVACTALVDLYSKFDVTKARKMFERLRNK-DAVIYNVMMT 320
+ IH + IR GV E LV L S ++ A K+F ++ + I+N ++
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 321 GYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 379
GY + + A +++ EM + V P+ + LI AV+ + D+RL +IH V+R +
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 439
+ + + N ++H YA CG + A VF++M +DLV+W S+I G+ +G +EA+ L+ +
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 499
+ ++ D T++SLL A +++G L+ K VH + + L +N L+ YA+CG++
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 500 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTA 558
A+ LF +M ++ SW +++ A++G E ++LF +M+ + P E+TF IL A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 559 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 618
CSH G+V+EG + FR M EY I P H+ C++DLL+RAGQ+ +AY +KSMP +
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 619 ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTK 678
TLL AC ++GD+++ E QIL+LEP +S YVL+SN+ A RW +V IR
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 679 DKELKSTPGYSLIEL 693
+K PG+SL+E+
Sbjct: 454 RDGVKKVPGHSLVEV 468
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 201/407 (49%), Gaps = 23/407 (5%)
Query: 156 LGSLQEGRAIHGYAIRRGFGVCD-EIFETTLLDMYHKCGGVKMAAA--VFGKMNATSTTV 212
+ S+ + R IH ++IR G + D E+ + + + M+ A VF K+ V
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE-KPINV 85
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
WN LI Y G ++ AF L+R+M + V PD T I + + + G++IH
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 272 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 330
+IR G + +L+ LY+ DV A K+F+++ KD V +N ++ G+ +N P E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 331 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
A+ ++ EM + P+ ++L+SA + + + L + +H Y+++ + +N ++
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 391 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR-ENLRIDSV 449
YA+CG ++ A+ +F+ M ++ VSWTS+I G +G EAI LF+ ++ E L +
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 450 TLISLLQALSQLGCLSA-------VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 502
T + +L A S G + ++E + + R H ++ A+ G++ A
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH------FGCMVDLLARAGQVKKA 379
Query: 503 -RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 548
Y+ + + W +LGA +HG+ L F +++ ++P+
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 196/414 (47%), Gaps = 20/414 (4%)
Query: 60 KRVHVDSIKLNLN-SDCFVGSSLIRLY----SEYGKLEDAHRVFDEITNK-DLVAYTSII 113
+++H SI+ ++ SD +G LI Y + AH+VF +I ++ + ++I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 114 TAYAHSGGSCVYGAFRIASTMQDQRLY-PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR 172
YA G S AF + M+ L P+ T L+ A + ++ G IH IR
Sbjct: 93 RGYAEIGNSI--SAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 173 GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF 232
GFG + + +LL +Y CG V A VF KM +WN +I + NG+ EA
Sbjct: 151 GFGSLIYV-QNSLLHLYANCGDVASAYKVFDKMPEKDLV--AWNSVINGFAENGKPEEAL 207
Query: 233 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY 292
L+ +M + + PD T+ + + +CA++ L GK +H YMI++G+ ++ + L+DLY
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 293 SKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALF 350
++ V +A+ +F+ + +K++V + ++ G N EAI +F M + P F
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQYI--TRVEIANQIIHTYAKCGYLQYARLVFNRM 408
+ ++ A S ++ + +R +Y R+E ++ A+ G ++ A M
Sbjct: 328 VGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 409 RSR-DLVSWTSMITGYVHHGHIDEA-IILFRLLQRENLRIDSVTLISLLQALSQ 460
+ ++V W +++ HG D A ++LQ E L+S + A Q
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 33/322 (10%)
Query: 21 YGEVLRRYLDLKNS--KFSL------------DCSAITLCLKSCVALGRLEFGKRVHVDS 66
+ ++R Y ++ NS FSL D +K+ + + G+ +H
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
I+ S +V +SL+ LY+ G + A++VFD++ KDLVA+ S+I +A +G
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP--EE 205
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
A + + M + + P+ T+VSLL A AK+G+L G+ +H Y I+ G + LL
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL-TRNLHSSNVLL 264
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-VLP 245
D+Y +CG V+ A +F +M ++ SW LI NG EA ELF+ M + +LP
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSV--SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRM----GVEPDMVACTALVDLYSKFDVTKAR 301
+T + +C+ + G Y RM +EP + +VDL ++ + +
Sbjct: 323 CEITFVGILYACSHCGMVKEG---FEYFRRMREEYKIEPRIEHFGCMVDLLAR--AGQVK 377
Query: 302 KMFERLRN----KDAVIYNVMM 319
K +E +++ + VI+ ++
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLL 399
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L Y ++ + D I L +C +G L GKRVHV IK+ L + + L+
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYP 141
LY+ G++E+A +FDE+ +K+ V++TS+I A +G G F+ + + L P
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG--LLP 322
Query: 142 NRVTLVSLLHAAAKLGSLQEG-----RAIHGYAIR---RGFGVCDEIFETTLLDMYHKCG 193
+T V +L+A + G ++EG R Y I FG ++D+ + G
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG--------CMVDLLARAG 374
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAA-YLHNGQALEAF 232
VK A M V W L+ A +H L F
Sbjct: 375 QVKKAYEYIKSMPMQPNVV-IWRTLLGACTVHGDSDLAEF 413
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/621 (28%), Positives = 304/621 (48%), Gaps = 41/621 (6%)
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
D F +++I YS +L DA ++F K+ +++ ++I+ Y SG AF +
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKV--EAFNLFWE 115
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
MQ + PN TL S+L L L G IHG+ I+ GF + D LL MY +C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL-DVNVVNGLLAMYAQCK 174
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
+ A +F M V +W ++ Y NG A +A E FR + + T +
Sbjct: 175 RISEAEYLFETMEGEKNNV-TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 233
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 312
+ +CA + G +H +++ G + ++ +AL+D+Y+K ++ AR + E + D
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR-DIRLARSIHG 371
V +N M+ G ++ L EA+++F M + + + ++++ + R ++++A S H
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHC 353
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
+++ Y T + N ++ YAK G + A VF M +D++SWT+++TG H+G DE
Sbjct: 354 LIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDE 413
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 491
A+ LF ++ + D + S+L A ++L L ++VH ++ LSVNNSL+T
Sbjct: 414 ALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVT 473
Query: 492 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 551
Y KCG L A +F M R L +W
Sbjct: 474 MYTKCGSLEDANVIFNSMEIRDLITW---------------------------------- 499
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
T ++ + +GL+E+ + F SM Y I PG HY C+IDL R+G + L+ M
Sbjct: 500 -TCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Query: 612 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 671
+ +L+A R +G+ E GE AK +++LEP N+ YV +SN+ + GR DE A
Sbjct: 559 EVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAA 618
Query: 672 HIRAMTKDKELKSTPGYSLIE 692
++R + K + + PG S +E
Sbjct: 619 NVRRLMKSRNISKEPGCSWVE 639
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 34/349 (9%)
Query: 12 LVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEF--GKRVHVDSIKL 69
+V R+ GE L + + +D I L +C AL R E H +K
Sbjct: 300 IVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTEMKIASSAHCLIVKT 358
Query: 70 NLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFR 129
+ V ++L+ +Y++ G ++ A +VF+ + KD++++T+++T H+G A +
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGS--YDEALK 416
Query: 130 IASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMY 189
+ M+ + P+++ S+L A+A+L L+ G+ +HG I+ GF + +L+ MY
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSV-NNSLVTMY 475
Query: 190 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM----------I 239
KCG ++ A +F M +W LI Y NG +A F M
Sbjct: 476 TKCGSLEDANVIFNSMEIRDLI--TWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPE 533
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF---- 295
H + DL + + +L +H +M VEPD A++ K
Sbjct: 534 HYACMIDLFGRSGDFVKVEQL--------LH----QMEVEPDATVWKAILAASRKHGNIE 581
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 344
+ +A K L +AV Y + Y EA NV M ++S
Sbjct: 582 NGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNIS 630
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 305/571 (53%), Gaps = 13/571 (2%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
A RI ++ + SLL K+ S G H + ++ G D +LL
Sbjct: 45 AIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLET-DRNVGNSLL 103
Query: 187 DMYHKCG-GVKMAAAVF-GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL 244
+Y K G G++ VF G+ + SW +++ Y+ + ++A E+F +M+ +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAI---SWTSMMSGYVTGKEHVKALEVFVEMVSFGLD 160
Query: 245 PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS-KFDVTKARKM 303
+ TL++A+ +C+EL + G+ HG +I G E + + L LY + AR++
Sbjct: 161 ANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRV 220
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRD 362
F+ + D + + +++ + KNDL EA+ +F+ M + + P+ + F +++A +LR
Sbjct: 221 FDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRR 280
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 422
++ + IHG ++ + + V + + ++ Y KCG ++ AR VFN M ++ VSW++++ G
Sbjct: 281 LKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 423 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 482
Y +G ++AI +FR ++ ++L ++L+A + L + KE+H R
Sbjct: 341 YCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
+ V ++LI Y K G ++ A ++ +M+ R + +WNAML A A +G E + FN M
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 602
IKPD ++F +ILTAC H+G+V+EG F M + Y I PG HY+C+IDLL RAG
Sbjct: 457 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFE 516
Query: 603 EAYNLVKSMPSTHSSAALCTLLSACRLYGD-TEIGEAIAKQILKLEPRNSSSYVLISNIL 661
EA NL++ + ++ LL C D + + E IAK++++LEP+ SYVL+SN+
Sbjct: 517 EAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMY 576
Query: 662 AEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
GR + +IR + + + T G S I+
Sbjct: 577 KAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 252/534 (47%), Gaps = 16/534 (2%)
Query: 6 PSITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVD 65
P+ ++ C+ E +R +S+ L++C + G + H
Sbjct: 27 PTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAH 86
Query: 66 SIKLNLNSDCFVGSSLIRLYSEYGK-LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCV 124
+K L +D VG+SL+ LY + G + + RVFD KD +++TS+++ Y G
Sbjct: 87 VVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVT--GKEH 144
Query: 125 YGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT 184
A + M L N TL S + A ++LG ++ GR HG I GF + +T
Sbjct: 145 VKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF-EWNHFISST 203
Query: 185 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR--K 242
L +Y A VF +M V W +++A+ N EA LF M HR
Sbjct: 204 LAYLYGVNREPVDARRVFDEM--PEPDVICWTAVLSAFSKNDLYEEALGLFYAM-HRGKG 260
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKAR 301
++PD T + +C L L GK IHG +I G+ ++V ++L+D+Y K V +AR
Sbjct: 261 LVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREAR 320
Query: 302 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 361
++F + K++V ++ ++ GY +N +AI +F EM + ++ F ++ A + L
Sbjct: 321 QVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLA 376
Query: 362 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 421
+RL + IHG +R V + + +I Y K G + A V+++M R++++W +M++
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
+G +EA+ F + ++ ++ D ++ I++L A G + + L +++ K
Sbjct: 437 ALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK 496
Query: 482 ELSVNNS-LITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGNYAEV 533
+ + S +I + G A L ++ R S W +LG A + + + V
Sbjct: 497 PGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRV 550
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 190/390 (48%), Gaps = 10/390 (2%)
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAIL-SCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
GQ EA + H +P L ++L +C ++ HG H ++++ G+E D
Sbjct: 40 GQLTEAIRILNS-THSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNV 98
Query: 285 CTALVDLYSKF--DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
+L+ LY K + + R++F+ KDA+ + MM+GY+ V+A+ VF EM+
Sbjct: 99 GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
+ N + + A S+L ++RL R HG V+ H + I++ + + Y AR
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR-ENLRIDSVTLISLLQALSQL 461
VF+ M D++ WT++++ + + +EA+ LF + R + L D T ++L A L
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 462 GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAML 521
L KE+H G + V +SL+ Y KCG + AR +F M+++ SW+A+L
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALL 338
Query: 522 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 581
G Y +G + + +++F M+ + D F ++L AC+ V G +I +R
Sbjct: 339 GGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR-GC 393
Query: 582 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+ + +IDL ++G + A + M
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKM 423
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/668 (28%), Positives = 335/668 (50%), Gaps = 56/668 (8%)
Query: 34 SKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED 93
S+F+L S ++ C K + FG R H ++K L+ + FVG++L+ +Y++ G + D
Sbjct: 137 SRFTL-ASVLSACSKVLDGV----FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 94 -AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
RVF+ ++ + V+YT++I A V A ++ M ++ + + V L ++L
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENK--VLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 153 AAK---LGSLQE------GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFG 203
+A SL E G+ IH A+R GFG D +LL++Y K + A +F
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGG-DLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 204 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 263
+M V SWN +I + ++ ++ E +M P+ +T + + +C
Sbjct: 309 EM--PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------ 360
Query: 264 CHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYL 323
R G DV R++F + +N M++GY
Sbjct: 361 ----------FRSG------------------DVETGRRIFSSIPQPSVSAWNAMLSGYS 392
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
+ EAI+ F +M ++ P+ ++S+ + LR + + IHG V+R +
Sbjct: 393 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSH 452
Query: 384 IANQIIHTYAKCGYLQYARLVFNR-MRSRDLVSWTSMITGYVHHGHIDEAIILFRLL-QR 441
I + +I Y++C ++ + +F+ + D+ W SMI+G+ H+ +A+ILFR + Q
Sbjct: 453 IVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQT 512
Query: 442 ENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 501
L + + ++L + S+L L ++ H L ++ + + V +L Y KCG+++
Sbjct: 513 AVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572
Query: 502 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 561
AR F + + WN M+ Y +G E + L+ M KPD +TF S+LTACSH
Sbjct: 573 ARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 562 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC 621
SGLVE GL+I SM R + I P HY CI+D L RAG+L +A L ++ P SS
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWE 692
Query: 622 TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKE 681
LLS+CR++GD + +A+++++L+P++S++YVL+SN + +WD+ A ++ +
Sbjct: 693 ILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNR 752
Query: 682 LKSTPGYS 689
+ TPG S
Sbjct: 753 VHKTPGQS 760
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 160/707 (22%), Positives = 297/707 (42%), Gaps = 131/707 (18%)
Query: 59 GKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIIT---A 115
GK +H +++ + SD ++ + L+ LY E G + A +VFDE++ +D+ ++ + +T
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 116 YAHSGGSC---------------------VYGAFRIASTMQDQRLY-----PNRVTLVSL 149
G +C V F + + +R+ P+R TL S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 150 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGG-VKMAAAVFGKMNA 207
L A +K+ G HG A++ G IF LL MY KCG V VF ++
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLD--KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH-- 265
+ S+ +I + LEA ++FR M + V D + L+N ILS + C
Sbjct: 203 PNEV--SYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSN-ILSISAPREGCDSL 259
Query: 266 --------GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYN 316
GK IH +R+G D+ +L+++Y+K D+ A +F + + V +N
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 376
+M+ G+ + +++ M PN ++++ A
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------------------- 360
Query: 377 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 436
+ G ++ R +F+ + + +W +M++GY ++ H +EAI F
Sbjct: 361 ----------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
R +Q +NL+ D TL +L + ++L L K++H + R K + + LI Y++C
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Query: 497 GKLNMARYLFQQ-MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTS 554
K+ ++ +F + E + WN+M+ + + + L LF M + + P+E +F +
Sbjct: 465 EKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT 524
Query: 555 ILTACSH-----------------------------------SGLVEEGLQIFRSMIREY 579
+L++CS G ++ Q F +++R+
Sbjct: 525 VLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKN 584
Query: 580 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA---ALCTLLSACRLYGDTEIG 636
T++ +N +I G+ EA L + M S+ ++L+AC G E G
Sbjct: 585 TVI-----WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Query: 637 EAI---AKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 680
I ++I +EP Y+ I + L GR ++ + T K
Sbjct: 640 LEILSSMQRIHGIEPE-LDHYICIVDCLGRAGRLEDAEKLAEATPYK 685
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 155/306 (50%), Gaps = 10/306 (3%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
HY E + + ++ D + +++ L SC L LE GK++H I+ ++ + + S
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNK-DLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQ 137
LI +YSE K+E + +FD+ N+ D+ + S+I+ + H+ + FR Q
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFR--RMHQTA 513
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 197
L PN + ++L + ++L SL GR HG ++ G+ V D ET L DMY KCG +
Sbjct: 514 VLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY-VSDSFVETALTDMYCKCGEIDS 572
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 257
A F + +T + WN +I Y HNG+ EA L+R+MI PD +T + + +C
Sbjct: 573 ARQFFDAVLRKNTVI--WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTAC 630
Query: 258 AELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVI 314
+ + G I M R+ G+EP++ +VD + + A K+ E K +V+
Sbjct: 631 SHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVL 690
Query: 315 YNVMMT 320
+ ++++
Sbjct: 691 WEILLS 696
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 451 LISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT 510
L SLL+ C + K +H R + + N L+ Y +CG + AR +F +M+
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 511 ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ 570
R + SWNA L G+ E ++F+ M + D +++ ++++ G E+ L
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMP----ERDVVSWNNMISVLVRKGFEEKALV 124
Query: 571 IFRSMI 576
+++ M+
Sbjct: 125 VYKRMV 130
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 262/474 (55%), Gaps = 17/474 (3%)
Query: 231 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 290
A L+R+M + PD T ++CA+L+ + G+S+H + ++G+E D+ +L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 291 LYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 349
+Y+K V ARK+F+ + +D V +N M++GY + +A+++F +M + P+
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 350 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 409
++++ A S L D+R R + + + + +++I Y KCG L AR VFN+M
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
+D V+WT+MIT Y +G EA LF +++ + D+ TL ++L A +G L K+
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 470 VHCLTYRAFHGKELS------VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
+ H ELS V L+ Y KCG++ A +F+ M + +WNAM+ A
Sbjct: 356 IET------HASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
YA G+ E L LF+ M ++ P ++TF +L+AC H+GLV +G + F M + +VP
Sbjct: 410 YAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP 466
Query: 584 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 643
HY IIDLLSRAG L EA+ ++ P L +L AC D I E + +
Sbjct: 467 KIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRML 526
Query: 644 LKL-EPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+++ E +N+ +YV+ SN+LA+ WDE A +RA+ +D+ + TPG S IE++ +
Sbjct: 527 MEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGE 580
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 192/401 (47%), Gaps = 15/401 (3%)
Query: 27 RYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYS 86
++ LK KF+ + I +C L + G+ VH K+ L D + SLI +Y+
Sbjct: 124 KFSGLKPDKFTYNFVFI-----ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYA 178
Query: 87 EYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTL 146
+ G++ A ++FDEIT +D V++ S+I+ Y+ +G A + M+++ P+ TL
Sbjct: 179 KCGQVGYARKLFDEITERDTVSWNSMISGYSEAG--YAKDAMDLFRKMEEEGFEPDERTL 236
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
VS+L A + LG L+ GR + AI + G+ + L+ MY KCG + A VF +M
Sbjct: 237 VSMLGACSHLGDLRTGRLLEEMAITKKIGLST-FLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
+W +I Y NG++ EAF+LF +M V PD TL+ + +C + L G
Sbjct: 296 KKDRV--AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 325
K I + + ++ ++ T LVD+Y K V +A ++FE + K+ +N M+T Y
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA-RSIHGYVLRHQYITRVEI 384
EA+ +F +MSV P+ F+ ++SA + R H + ++E
Sbjct: 414 GHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 425
II ++ G L A R + + I G H
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH 511
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
A + M+ L P++ T + A AKL + GR++H + G D +L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER-DVHINHSLI 174
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD 246
MY KCG V A +F ++ T SWN +I+ Y G A +A +LFR+M PD
Sbjct: 175 MMYAKCGQVGYARKLFDEITERDTV--SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 232
Query: 247 LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFE 305
TL + + +C+ L L G+ + I + + L+ +Y K D+ AR++F
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
++ KD V + M+T Y +N EA +F EM K VSP+ ++SA + + L
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 425
+ I + + +A ++ Y KCG ++ A VF M ++ +W +MIT Y H
Sbjct: 353 GKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAH 412
Query: 426 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
GH EA++LF R ++ +T I +L A G
Sbjct: 413 QGHAKEALLLF---DRMSVPPSDITFIGVLSACVHAG 446
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 182/388 (46%), Gaps = 26/388 (6%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
+ ++ F D + L +C LG L G+ + +I + F+GS LI +Y +
Sbjct: 221 FRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGK 280
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
G L+ A RVF+++ KD VA+T++IT Y+ +G S AF++ M+ + P+ TL
Sbjct: 281 CGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSE--AFKLFFEMEKTGVSPDAGTLS 338
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMN 206
++L A +G+L+ G+ I +A + I+ T L+DMY KCG V+ A VF M
Sbjct: 339 TVLSACGSVGALELGKQIETHASE--LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
+ +WN +I AY H G A EA LF +M V P +T + +C + G
Sbjct: 397 VKNEA--TWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQG 451
Query: 267 -KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTG--Y 322
+ H G+ P + T ++DL S+ + +A + ER K I + G +
Sbjct: 452 CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH 511
Query: 323 LKNDLPV--EAINVFHEMIKMS------VSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
+ D+ + +A+ + EM + +S NV + + + +R + R V+
Sbjct: 512 KRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG----VV 567
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYAR 402
+ + +EI +++ A YLQ R
Sbjct: 568 KTPGCSWIEIEGELMEFLAGSDYLQCGR 595
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 142/307 (46%), Gaps = 38/307 (12%)
Query: 367 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
R I +L H VE N +I + G Y+ +F+ + S+ MI G +
Sbjct: 54 RQIQAQMLLHS----VEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 109
Query: 427 GHIDEAII-LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
+ EA + L+R ++ L+ D T + A ++L + + VH ++ +++ +
Sbjct: 110 WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHI 169
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
N+SLI YAKCG++ AR LF ++TER SWN+M+ Y+ G + + LF M+
Sbjct: 170 NHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGF 229
Query: 546 KPDELTFTSILTACSHSG------LVEE-------GLQIF--RSMIREY----------- 579
+PDE T S+L ACSH G L+EE GL F +I Y
Sbjct: 230 EPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARR 289
Query: 580 ----TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS---AALCTLLSACRLYGD 632
I V + +I + S+ G+ +EA+ L M T S L T+LSAC G
Sbjct: 290 VFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA 349
Query: 633 TEIGEAI 639
E+G+ I
Sbjct: 350 LELGKQI 356
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E + + +++ + S D ++ L +C ++G LE GK++ + +L+L + +V + L+
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQ-RLYP 141
+Y + G++E+A RVF+ + K+ + ++ITAYAH G + + A + D+ + P
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHA------KEALLLFDRMSVPP 430
Query: 142 NRVTLVSLLHAAAKLGSLQEG-RAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCG 193
+ +T + +L A G + +G R H + FG+ +I T ++D+ + G
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFH--EMSSMFGLVPKIEHYTNIIDLLSRAG 482
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 301/555 (54%), Gaps = 15/555 (2%)
Query: 148 SLLHAAAKLGSLQEGRA----IHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVF 202
SL A KL S Q + IHG +I GF C + + L+D+Y K G VK A +F
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNGF--CSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
++ + V SW +I+ + G +A LF++M V + T + + SC +L
Sbjct: 71 DRI--SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 128
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTG 321
L G IHG + + +++ +AL+ LY++ + +AR F+ ++ +D V +N M+ G
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
Y N + ++F M+ P+ F +L+ A ++ + + +HG ++ +
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH-IDEAIILFRLLQ 440
+ +++ Y KCG L A + + RDL+S T++ITG+ + +A +F+ +
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNSLITTYAKCGKL 499
R ++D V + S+L+ + + ++ +++H ++ + ++++ NSLI YAK G++
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 500 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
A F++M E+ + SW +++ Y HGN+ + + L+N M+ IKP+++TF S+L+AC
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS--THSS 617
SH+G E G +I+ +MI ++ I E H +CIID+L+R+G L EAY L++S + SS
Sbjct: 429 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 488
Query: 618 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 677
+ L ACR +G+ ++ + A Q+L +EPR +Y+ ++++ A G WD + R +
Sbjct: 489 STWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLM 548
Query: 678 KDK-ELKSTPGYSLI 691
K+ PGYSL+
Sbjct: 549 KESGSCNKAPGYSLV 563
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 238/483 (49%), Gaps = 28/483 (5%)
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG 121
+H +SI S+ + LI LY + G ++ A ++FD I+ +D+V++T++I+ ++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSR--- 90
Query: 122 SCVY--GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
C Y A + M + + N+ T S+L + LG L+EG IHG ++ +G +
Sbjct: 91 -CGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG-SVEKGNCAGNL 148
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
I + LL +Y +CG ++ A F M SWN +I Y N A +F LF+ M+
Sbjct: 149 IVRSALLSLYARCGKMEEARLQFDSMKERDLV--SWNAMIDGYTANACADTSFSLFQLML 206
Query: 240 HRKVLPDLLTL-----ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
PD T A+ ++ C E+ +HG I++G +LV+ Y K
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEI-----VSELHGLAIKLGFGRSSALIRSLVNAYVK 261
Query: 295 F-DVTKARKMFERLRNKDAVIYNVMMTGY-LKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
+ A K+ E + +D + ++TG+ +N+ +A ++F +MI+M + + +
Sbjct: 262 CGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSS 321
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
++ + + + + R IHG+ L+ I V + N +I YAK G ++ A L F M+ +
Sbjct: 322 MLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK 381
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
D+ SWTS+I GY HG+ ++AI L+ ++ E ++ + VT +SLL A S G +++
Sbjct: 382 DVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIY 441
Query: 472 CLTYRAFHGKELSVN--NSLITTYAKCGKLNMARYLFQQ---MTERCLTSWNAMLGAYAM 526
T HG E + +I A+ G L A L + + ++W A L A
Sbjct: 442 -DTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRR 500
Query: 527 HGN 529
HGN
Sbjct: 501 HGN 503
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 195/393 (49%), Gaps = 18/393 (4%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
LKSC LG L+ G ++H K N + V S+L+ LY+ GK+E+A FD + +DL
Sbjct: 120 LKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDL 179
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V++ ++I Y + +C +F + M + P+ T SLL A+ + L+ +H
Sbjct: 180 VSWNAMIDGY--TANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELH 237
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY-LHN 225
G AI+ GFG + +L++ Y KCG + A + + S LI + N
Sbjct: 238 GLAIKLGFGRSSALIR-SLVNAYVKCGSLANAWKL--HEGTKKRDLLSCTALITGFSQQN 294
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG-VEPDMVA 284
+AF++F+ MI K D + +++ + C + + G+ IHG+ ++ + D+
Sbjct: 295 NCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVAL 354
Query: 285 CTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
+L+D+Y+K ++ A FE ++ KD + ++ GY ++ +AI++++ M +
Sbjct: 355 GNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERI 414
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVL-RHQYITRVEIANQIIHTYAKCGYLQYAR 402
PN FL+L+SA S L I+ ++ +H R E + II A+ GYL+ A
Sbjct: 415 KPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA- 473
Query: 403 LVFNRMRSRDLV------SWTSMITGYVHHGHI 429
+ +RS++ + +W + + HG++
Sbjct: 474 --YALIRSKEGIVSLSSSTWGAFLDACRRHGNV 504
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
DC L++ + + LE +H +IKL + SL+ Y + G L +A ++
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
+ +DL++ T++IT ++ +C AF I M + + V + S+L + S
Sbjct: 273 EGTKKRDLLSCTALITGFSQQ-NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
+ GR IHG+A++ D +L+DMY K G ++ A F +M V SW L
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK--EKDVRSWTSL 389
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMG 277
IA Y +G +A +L+ +M H ++ P+ +T + + +C+ G I+ MI + G
Sbjct: 390 IAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHG 449
Query: 278 VEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVI 314
+E + ++D+ ++ + + + +R+K+ ++
Sbjct: 450 IEAREEHLSCIIDMLARSGYLE--EAYALIRSKEGIV 484
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN-LNSDCFVGSSLIRLYS 86
+ D+ K +D ++ LK C + + G+++H ++K + + D +G+SLI +Y+
Sbjct: 304 FKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYA 363
Query: 87 EYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTL 146
+ G++EDA F+E+ KD+ ++TS+I Y G A + + M+ +R+ PN VT
Sbjct: 364 KSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGN--FEKAIDLYNRMEHERIKPNDVTF 421
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF-GKM 205
+SLL A + G + G I+ I + E + ++DM + G ++ A A+ K
Sbjct: 422 LSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKE 481
Query: 206 NATSTTVGSWNPLIAAYLHNGQ 227
S + +W + A +G
Sbjct: 482 GIVSLSSSTWGAFLDACRRHGN 503
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 292/568 (51%), Gaps = 40/568 (7%)
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMY-HKCGG-VKMAAAVFGKMNATSTTVGSWNPLIA 220
+ +H +I RG + F+ L + + GG V A +F K+ V WN +I
Sbjct: 51 KQLHSQSITRGVAP-NPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVV--WNNMIK 107
Query: 221 AYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD--YLCHGKSIHGYMIRMGV 278
+ E L+ M+ V PD T +L+ + D L GK +H ++++ G+
Sbjct: 108 GWSKVDCDGEGVRLYLNMLKEGVTPDSHTFP-FLLNGLKRDGGALACGKKLHCHVVKFGL 166
Query: 279 EPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
++ ALV +YS + AR +F+R +D +N+M++GY + E+I + E
Sbjct: 167 GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVE 226
Query: 338 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 397
M + VSP L ++SA S ++D L + +H YV + + + N +++ YA CG
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 398 LQYARLVFNRMRSRDLVSWTSMITGYVHHGHI---------------------------- 429
+ A +F M++RD++SWTS++ GYV G++
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 430 ---DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 486
+E++ +FR +Q + D T++S+L A + LG L + + + ++ V
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
N+LI Y KCG A+ +F M +R +W AM+ A +G E +K+F M+ +I+
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
PD++T+ +L+AC+HSG+V++ + F M ++ I P VHY C++D+L RAG + EAY
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 607 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 666
+++ MP +S LL A RL+ D + E AK+IL+LEP N + Y L+ NI A R
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 667 WDEVAHIRAMTKDKELKSTPGYSLIELD 694
W ++ +R D +K TPG+SLIE++
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFSLIEVN 614
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 169/367 (46%), Gaps = 36/367 (9%)
Query: 22 GEVLRRYLDLKNSKFSLDCSAITLCLKSCV-ALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
GE +R YL++ + D L G L GK++H +K L S+ +V ++
Sbjct: 116 GEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNA 175
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
L+++YS G ++ A VFD +D+ ++ +I+ Y + + M+ +
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE--YEESIELLVEMERNLVS 233
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGY--------------AIRRGFGVCDE------I 180
P VTL+ +L A +K+ + +H Y A+ + C E I
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 181 FE----------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALE 230
F T+++ Y + G +K+A F +M SW +I YL G E
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI--SWTIMIDGYLRAGCFNE 351
Query: 231 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 290
+ E+FR+M ++PD T+ + + +CA L L G+ I Y+ + ++ D+V AL+D
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 291 LYSKFDVT-KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 349
+Y K + KA+K+F + +D + M+ G N EAI VF +M MS+ P+
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 350 FLNLISA 356
+L ++SA
Sbjct: 472 YLGVLSA 478
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 8 ITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSI 67
I G L A C + E L + +++++ D + L +C LG LE G+ +
Sbjct: 340 IDGYLRAGC----FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 68 KLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGA 127
K + +D VG++LI +Y + G E A +VF ++ +D +T+++ A++G A
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG--QEA 453
Query: 128 FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL-- 185
++ MQD + P+ +T + +L A G + + R +A R D E +L
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF--FAKMRS----DHRIEPSLVH 507
Query: 186 ----LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI-AAYLHNGQAL 229
+DM + G VK A + KM ++ W L+ A+ LHN + +
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSI-VWGALLGASRLHNDEPM 555
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 257/441 (58%), Gaps = 1/441 (0%)
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIY 315
CA + K+ HG +IR+ +E D+ L++ YSK V AR++F+ + + V +
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
N M+ Y +N + EA+++F EM + +++SA D + +H ++
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 435
+ + ++ YAKCG ++ A VF M+ + V+W+SM+ GYV + + +EA++L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 436 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 495
+R QR +L + TL S++ A S L L K++H + ++ G + V +S + YAK
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 496 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 555
CG L + +F ++ E+ L WN ++ +A H EV+ LF M+ + P+E+TF+S+
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 370
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
L+ C H+GLVEEG + F+ M Y + P VHY+C++D+L RAG L+EAY L+KS+P
Sbjct: 371 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 430
Query: 616 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 675
+++ +LL++CR+Y + E+ E A+++ +LEP N+ ++VL+SNI A +W+E+A R
Sbjct: 431 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 490
Query: 676 MTKDKELKSTPGYSLIELDKQ 696
+ +D ++K G S I++ +
Sbjct: 491 LLRDCDVKKVRGKSWIDIKDK 511
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 157/310 (50%), Gaps = 6/310 (1%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+ C G + K H I+++L D + + LI YS+ G +E A +VFD + + L
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V++ ++I Y + A I M+++ + T+ S+L A E + +H
Sbjct: 128 VSWNTMIGLYTRNRME--SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
+++ + + T LLD+Y KCG +K A VF M S+ +W+ ++A Y+ N
Sbjct: 186 CLSVKTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV--TWSSMVAGYVQNK 242
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT 286
EA L+R+ + + TL++ I +C+ L L GK +H + + G ++ +
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 287 ALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 345
+ VD+Y+K + ++ +F ++ K+ ++N +++G+ K+ P E + +F +M + + P
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 362
Query: 346 NVALFLNLIS 355
N F +L+S
Sbjct: 363 NEVTFSSLLS 372
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
+LQ ++ G + K H R ++++ N LI Y+KCG + +AR +F M ER
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
L SWN M+G Y + +E L +F M+ K E T +S+L+AC G+ + L+ +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKK 183
Query: 574 -SMIREYTIVPGEVHY-NCIIDLLSRAGQLTEAYNLVKSMPSTHS 616
+ T + ++ ++DL ++ G + +A + +SM S
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSS 228
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 17 RRRHYGEVLRRY-----LDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNL 71
+ ++Y E L Y + L+ ++F+L + +C +C L L GK++H K
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTL---SSVIC--ACSNLAALIEGKQMHAVICKSGF 294
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA-HSGGSCVYGAFRI 130
S+ FV SS + +Y++ G L +++ +F E+ K+L + +II+ +A H+ V F
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE- 353
Query: 131 ASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMY 189
MQ ++PN VT SLL G ++EGR +R +G+ + + ++D+
Sbjct: 354 --KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDIL 410
Query: 190 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 221
+ G + A + K T W L+A+
Sbjct: 411 GRAGLLSEAYELI-KSIPFDPTASIWGSLLAS 441
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 262/486 (53%), Gaps = 11/486 (2%)
Query: 215 WNPLIAAYLHNGQALE---AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
W+ LI + G L +F +R M V+P T + + +L + H
Sbjct: 70 WDSLIG-HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHA 127
Query: 272 YMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 328
++++ G++ D +L+ YS FD A ++F+ +KD V + M+ G+++N
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDF--ASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 329 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQ 387
EA+ F EM K V+ N ++++ A + D+R RS+HG L + V I +
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSS 245
Query: 388 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 447
++ Y KC A+ VF+ M SR++V+WT++I GYV D+ +++F + + ++ +
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 448 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQ 507
TL S+L A + +G L + VHC + + +LI Y KCG L A +F+
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 508 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE 567
++ E+ + +W AM+ +A HG + LF M ++ P+E+TF ++L+AC+H GLVEE
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 568 GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSAC 627
G ++F SM + + P HY C++DL R G L EA L++ MP ++ L +C
Sbjct: 426 GRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSC 485
Query: 628 RLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPG 687
L+ D E+G+ A +++KL+P +S Y L++N+ +E WDEVA +R KD+++ +PG
Sbjct: 486 LLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPG 545
Query: 688 YSLIEL 693
+S IE+
Sbjct: 546 FSWIEV 551
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 185/355 (52%), Gaps = 16/355 (4%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG 120
+ H +K L+SD FV +SLI YS G + A R+FD +KD+V +T++I + +G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 121 GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI 180
+ + + M+ + N +T+VS+L AA K+ ++ GR++HG + G CD
Sbjct: 184 SASEAMVYFV--EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 181 FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
++L+DMY KC A VF +M S V +W LIA Y+ + + +F +M+
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEM--PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK 299
Query: 241 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTK 299
V P+ TL++ + +CA + L G+ +H YMI+ +E + A T L+DLY K + +
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEE 359
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA--- 356
A +FERL K+ + M+ G+ + +A ++F+ M+ VSPN F+ ++SA
Sbjct: 360 AILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAH 419
Query: 357 ---VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 408
V + R RL S+ G R + + ++ + + G L+ A+ + RM
Sbjct: 420 GGLVEEGR--RLFLSMKG---RFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 152/290 (52%), Gaps = 12/290 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN-LNSDCFVGSSL 81
E + ++++K + + + + LK+ + + FG+ VH ++ + D F+GSSL
Sbjct: 187 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 246
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYP 141
+ +Y + +DA +VFDE+ ++++V +T++I Y S C + M + P
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQS--RCFDKGMLVFEEMLKSDVAP 304
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
N TL S+L A A +G+L GR +H Y I+ + + TTL+D+Y KCG ++ A V
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI-NTTAGTTLIDLYVKCGCLEEAILV 363
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F +++ V +W +I + +G A +AF+LF M+ V P+ +T + +CA
Sbjct: 364 FERLH--EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 262 YLCHGKSIHGYMI-RMGVEP--DMVACTALVDLYSKFD-VTKARKMFERL 307
+ G+ + M R +EP D AC +VDL+ + + +A+ + ER+
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYAC--MVDLFGRKGLLEEAKALIERM 469
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L +C +G L G+RVH IK ++ + G++LI LY + G LE+A VF+ + K++
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+T++I +A G + AF + TM + PN VT +++L A A G ++EGR +
Sbjct: 373 YTWTAMINGFAAHGYA--RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 167 GYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
+++ F + + ++D++ + G ++ A A+ +M T V W L + L
Sbjct: 431 -LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV-VWGALFGSCL 486
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 250/439 (56%), Gaps = 2/439 (0%)
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 315
C L G+ +H ++++ D+V L+++Y+K + +ARK+FE++ +D V +
Sbjct: 70 CTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTW 129
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
+++GY ++D P +A+ F++M++ SPN ++I A + R +HG+ ++
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 435
+ + V + + ++ Y + G + A+LVF+ + SR+ VSW ++I G+ ++A+ L
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 436 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 495
F+ + R+ R + SL A S G L K VH ++ N+L+ YAK
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 496 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 555
G ++ AR +F ++ +R + SWN++L AYA HG E + F M+ I+P+E++F S+
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
LTACSHSGL++EG + M ++ IVP HY ++DLL RAG L A ++ MP
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 616 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 675
++A LL+ACR++ +TE+G A+ + +L+P + +V++ NI A GGRW++ A +R
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 676 MTKDKELKSTPGYSLIELD 694
K+ +K P S +E++
Sbjct: 489 KMKESGVKKEPACSWVEIE 507
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 168/330 (50%), Gaps = 6/330 (1%)
Query: 30 DLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYG 89
DL+ S D LK C L G+ VH ++ D +G++L+ +Y++ G
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 90 KLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSL 149
LE+A +VF+++ +D V +T++I+ Y+ C A + M PN TL S+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPC--DALLFFNQMLRFGYSPNEFTLSSV 167
Query: 150 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS 209
+ AAA G +HG+ ++ GF + + LLD+Y + G + A VF + + +
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHV-GSALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 210 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 269
SWN LIA + +A ELF+ M+ P + A+ +C+ +L GK +
Sbjct: 227 DV--SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 270 HGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 328
H YMI+ G + A L+D+Y+K + ARK+F+RL +D V +N ++T Y ++
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 329 VEAINVFHEMIKMSVSPNVALFLNLISAVS 358
EA+ F EM ++ + PN FL++++A S
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 150/323 (46%), Gaps = 12/323 (3%)
Query: 35 KFSLDCSAITL--CLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLE 92
+F + TL +K+ A R G ++H +K +S+ VGS+L+ LY+ YG ++
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 93 DAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
DA VFD + +++ V++ ++I +A G+ A + M P+ + SL A
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGT--EKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 212
+ G L++G+ +H Y I+ G + TLLDMY K G + A +F ++ V
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLV-AFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDV 328
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY 272
SWN L+ AY +G EA F +M + P+ ++ + + +C+ L G +
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 273 MIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR-NKDAVIYNVMMTG---YLKNDL 327
M + G+ P+ +VDL + D+ +A + E + A I+ ++ + +L
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 328 PVEAINVFHEMIKMSVSPNVALF 350
A E+ P+V L+
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILY 471
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 453 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 512
+LL+ + L + VH ++ ++ + N+L+ YAKCG L AR +F++M +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 513 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 560
+W ++ Y+ H + L FN M P+E T +S++ A +
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 192/639 (30%), Positives = 304/639 (47%), Gaps = 102/639 (15%)
Query: 158 SLQEGRAIHGYAIRRGFG------------------------VCDEIFE------TTLLD 187
SLQ RA+HG I GF + DEI E TT++
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 188 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
Y G + +A VF K +N +I + HN A LF +M H PD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 248 LTLANAILSCAEL-DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-----AR 301
T A+ + A + D H ++ G ALV +YSK + AR
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 302 KMFERLRNKDAVIYNVMMTGYLKN---DLPVEAINVFH---------------------- 336
K+F+ + KD + MMTGY+KN DL E +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 337 ---EMIKMSVSPNVAL----FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 389
EM++ VS + L + ++I A + ++L + +H YVLR + + N ++
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLV 327
Query: 390 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 449
Y KCG AR +F +M ++DLVSW ++++GYV GHI EA ++F+ ++ +N+ + +
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI-LSWM 386
Query: 450 TLISLL-------QALSQLGCL-------------SAVKEVHCL----TYRAFHGK---- 481
+IS L + L C+ A+K L + +H +
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Query: 482 ----ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 537
LS N+LIT YAKCG + AR +F+ M SWNA++ A HG+ AE + ++
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 538 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 597
M I+PD +T ++LTACSH+GLV++G + F SM Y I PG HY +IDLL R
Sbjct: 507 EEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCR 566
Query: 598 AGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLI 657
+G+ ++A ++++S+P ++ LLS CR++G+ E+G A ++ L P + +Y+L+
Sbjct: 567 SGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLL 626
Query: 658 SNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
SN+ A G+W+EVA +R + +D+ +K S IE++ Q
Sbjct: 627 SNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 191/446 (42%), Gaps = 80/446 (17%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGK----LEDAHRVFDEITNKDLVAYTSIITAY 116
+ H ++K V ++L+ +YS+ L A +VFDEI KD ++T+++T Y
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 117 AHSG---------------------GSCVYG---------AFRIASTMQDQRLYPNRVTL 146
+G + + G A + M + + T
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRR-GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
S++ A A G LQ G+ +H Y +RR F F+ +L+ +Y+KCG A A+F KM
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRREDFSF---HFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL--------------------- 244
A SWN L++ Y+ +G EA +F++M + +L
Sbjct: 347 PAKDLV--SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 245 ----------PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
P + AI SCA L C+G+ H ++++G + + A AL+ +Y+K
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 295 FDVT-KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
V +AR++F + D+V +N ++ ++ EA++V+ EM+K + P+ L +
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIA----NQIIHTYAKCGYLQYARLVFNRMR 409
++A S + R Y + + R+ ++I + G A V +
Sbjct: 525 LTACSHAGLVDQGRK---YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP 581
Query: 410 SRDLVS-WTSMITGYVHHGHIDEAII 434
+ W ++++G HG+++ II
Sbjct: 582 FKPTAEIWEALLSGCRVHGNMELGII 607
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 153/357 (42%), Gaps = 46/357 (12%)
Query: 2 NMKHPSITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKR 61
NMK + + R Y E L + +S LD +++C G L+ GK+
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG 121
VH ++ S F +SL+ LY + GK ++A +F+++ KDLV++ ++++ Y SG
Sbjct: 308 VHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 122 SCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF 181
+ A I M+++ N ++ + ++ A+ G +EG + R GF CD F
Sbjct: 367 --IGEAKLIFKEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 182 E----------------------------------TTLLDMYHKCGGVKMAAAVFGKMNA 207
L+ MY KCG V+ A VF M
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
+ SWN LIAA +G EA +++ +M+ + + PD +TL + +C+ + G+
Sbjct: 481 LDSV--SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 268 SIHGYMIRM-GVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD-AVIYNVMMTG 321
M + + P L+DL + + A + E L K A I+ +++G
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 270/518 (52%), Gaps = 39/518 (7%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN LIA+Y N E +++M+ + + PD T + + +C E + G+ +HG +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 275 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
+ + C AL+ +Y +F ++ AR++F+R+ +DAV +N ++ Y + EA
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 334 VFHEMIKMSVSPNVALFLNLISA--------------VSDLRD----------------- 362
+F +M V +V + N+IS +S +R+
Sbjct: 232 LFDKMWFSGVEVSVITW-NIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 363 -----IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
IRL + IHG + Y + N +I Y+KC L++A +VF + L +W
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
S+I+GY +EA L R + + +S+TL S+L +++ L KE HC R
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 478 FHGKELS-VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 536
K+ + + NSL+ YAK GK+ A+ + M++R ++ +++ Y G L L
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F M IKPD +T ++L+ACSHS LV EG ++F M EY I P H++C++DL
Sbjct: 471 FKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYG 530
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 656
RAG L +A +++ +MP S A TLL+AC ++G+T+IG+ A+++L+++P N YVL
Sbjct: 531 RAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVL 590
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
I+N+ A G W ++A +R + +D +K PG + I+ D
Sbjct: 591 IANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTD 628
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 208/470 (44%), Gaps = 49/470 (10%)
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLL--TLANAILSCAELDYLCHGKSIHGYMIRM 276
+A++ H A + F L R V DL+ + A+ + +C ++ G +H + I
Sbjct: 13 LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 277 GVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 335
GVE V LV YS F++ +A+ + E + +NV++ Y KN+L E I +
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 336 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 395
M+ + P+ + +++ A + D+ R +HG + Y + + + N +I Y +
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 396 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR------------------ 437
+ AR +F+RM RD VSW ++I Y G EA LF
Sbjct: 193 RNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIIS 252
Query: 438 --LLQREN---------------LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 480
LQ N +D V +I L+A S +G + KE+H L + +
Sbjct: 253 GGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYD 312
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
+V N+LIT Y+KC L A +F+Q E L +WN+++ YA E L M
Sbjct: 313 GIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM 372
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIF-----RSMIREYTIVPGEVHYNCIIDLL 595
+ +P+ +T SIL C+ ++ G + R ++YT++ +N ++D+
Sbjct: 373 LVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML-----WNSLVDVY 427
Query: 596 SRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 645
+++G++ A V + S +L+ G+ + A+ K++ +
Sbjct: 428 AKSGKIVAAKQ-VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTR 476
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 210/463 (45%), Gaps = 43/463 (9%)
Query: 5 HPSITGNLVAS-CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVH 63
HP L+AS + + EV+ Y + + D LK+C + FG+ VH
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 64 VDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG--- 120
+ S +V ++LI +Y + + A R+FD + +D V++ ++I YA G
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 121 -------------------------GSCV-----YGAFRIASTMQDQRLYPNRVTLVSLL 150
G C+ GA + S M++ + V ++ L
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
A + +G+++ G+ IHG AI + D + TL+ MY KC ++ A VF + S
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNV-RNTLITMYSKCKDLRHALIVFRQTEENS- 345
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
+ +WN +I+ Y ++ EA L R+M+ P+ +TLA+ + CA + L HGK H
Sbjct: 346 -LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 271 GYMIRMGVEPD-MVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 328
Y++R D + +LVD+Y+K + A+++ + + +D V Y ++ GY
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 329 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR--VEIAN 386
A+ +F EM + + P+ + ++SA S + + + ++ +Y R ++ +
Sbjct: 465 GVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLF-MKMQCEYGIRPCLQHFS 523
Query: 387 QIIHTYAKCGYLQYARLVFNRMRSRDL-VSWTSMITGYVHHGH 428
++ Y + G+L A+ + + M + +W +++ HG+
Sbjct: 524 CMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGN 566
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 134/602 (22%), Positives = 245/602 (40%), Gaps = 93/602 (15%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L +CV + G +VH I + + L+ YS + +A + I N D+
Sbjct: 50 LSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSI---IENSDI 106
Query: 107 ---VAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
+ + +I +YA + V A++ M + + P+ T S+L A + + G
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYK---RMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 163 RAIHG----YAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
R +HG + + VC+ L+ MY + + +A +F +M SWN +
Sbjct: 164 RVVHGSIEVSSYKSSLYVCN-----ALISMYKRFRNMGIARRLFDRMFERDAV--SWNAV 216
Query: 219 IAAYLHNGQALEAFELFRQMIHRKV--------------------------------LP- 245
I Y G EAFELF +M V P
Sbjct: 217 INCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPT 276
Query: 246 --DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARK 302
D + + + +C+ + + GK IHG I + L+ +YSK D+ A
Sbjct: 277 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALI 336
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
+F + +N +++GY + + EA ++ EM+ PN +++ + + +
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIAN 396
Query: 363 IRLARSIHGYVLRHQ-YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 421
++ + H Y+LR + + + N ++ YAK G + A+ V + M RD V++TS+I
Sbjct: 397 LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLID 456
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
GY + G A+ LF+ + R ++ D VT++++L A S K VH G+
Sbjct: 457 GYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSH------SKLVH-------EGE 503
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
L + +C + CL ++ M+ Y G A+ + ++M
Sbjct: 504 RLFMK-------MQC----------EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
KP T+ ++L AC G + G ++ PG +Y I ++ + AG
Sbjct: 547 Y---KPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPG--YYVLIANMYAAAGSW 601
Query: 602 TE 603
++
Sbjct: 602 SK 603
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 295/559 (52%), Gaps = 17/559 (3%)
Query: 137 QRL-YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
QRL +P+ ++L +L L + IH IR+G + + +
Sbjct: 3 QRLSHPSLLSLETLFKLCKSEIHLNQ---IHARIIRKGLEQDQNLISIFISSSSSSSSSL 59
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAI 254
+++VF ++ + T + WN LI Y + E + +M+ + PD T +
Sbjct: 60 SYSSSVFERVPSPGTYL--WNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVM 117
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
C+ + G S+HG ++R+G + D+V T+ VD Y K D+ ARK+F + ++AV
Sbjct: 118 KVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAV 177
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+ ++ Y+K+ EA ++F M + ++ AL L+ + D+ A+ + +
Sbjct: 178 SWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS----GDLVNAKKLFDEM 233
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
+ I+ +I YAK G + AR +F R D+ +W+++I GY +G +EA
Sbjct: 234 PKRDIISY----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAF 289
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNSLITT 492
+F + +N++ D ++ L+ A SQ+GC ++V L R V +LI
Sbjct: 290 KVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDM 349
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
AKCG ++ A LF++M +R L S+ +M+ A+HG +E ++LF M I PDE+ F
Sbjct: 350 NAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAF 409
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
T IL C S LVEEGL+ F M ++Y+I+ HY+CI++LLSR G+L EAY L+KSMP
Sbjct: 410 TVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 672
++A +LL C L+G+TEI E +A+ + +LEP+++ SYVL+SNI A RW +VAH
Sbjct: 470 FEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAH 529
Query: 673 IRAMTKDKELKSTPGYSLI 691
+R + + G S I
Sbjct: 530 LRDKMNENGITKICGRSWI 548
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 192/404 (47%), Gaps = 29/404 (7%)
Query: 238 MIHRKVLPDLLTLANAILSC-AELDYLCHGKSIHGYMIRMGVEPD--MVACTALVDLYSK 294
MI R P LL+L C +E+ H IH +IR G+E D +++ S
Sbjct: 1 MIQRLSHPSLLSLETLFKLCKSEI----HLNQIHARIIRKGLEQDQNLISIFISSSSSSS 56
Query: 295 FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNL 353
++ + +FER+ + ++N ++ GY L E +++ M++ ++ P+ F +
Sbjct: 57 SSLSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLV 116
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+ S+ +R+ S+HG VLR + V + + Y KC L AR VF M R+
Sbjct: 117 MKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNA 176
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
VSWT+++ YV G ++EA +F L+ NL + +L+ L + G L K++
Sbjct: 177 VSWTALVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKL--- 229
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
+ +++ S+I YAK G + AR LF++ + +W+A++ YA +G E
Sbjct: 230 -FDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGL------VEEGLQIFRSMIREYTIVPGEVH 587
K+F+ M N+KPDE +++ACS G V+ L + + +VP
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPA--- 345
Query: 588 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 631
+ID+ ++ G + A L + MP + C+++ ++G
Sbjct: 346 ---LIDMNAKCGHMDRAAKLFEEMPQ-RDLVSYCSMMEGMAIHG 385
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 192/425 (45%), Gaps = 20/425 (4%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D L +K C G++ G VH +++ + D VG+S + Y + L A +VF
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
E+ ++ V++T+++ AY S G A +M D N + +L+ K G
Sbjct: 169 GEMPERNAVSWTALVVAYVKS------GELEEAKSMFDLMPERNLGSWNALVDGLVKSGD 222
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
L + + +R D I T+++D Y K G + A +F + A V +W+ L
Sbjct: 223 LVNAKKLFDEMPKR-----DIISYTSMIDGYAKGGDMVSARDLFEE--ARGVDVRAWSAL 275
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM-IRMG 277
I Y NGQ EAF++F +M + V PD + + +C+++ + + Y+ RM
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMN 335
Query: 278 VEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 336
AL+D+ +K + +A K+FE + +D V Y MM G + EAI +F
Sbjct: 336 KFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 337 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY--ITRVEIANQIIHTYAK 394
+M+ + P+ F ++ R + + ++R +Y + + + I++ ++
Sbjct: 396 KMVDEGIVPDEVAFTVILKVCGQSRLVEEGLR-YFELMRKKYSILASPDHYSCIVNLLSR 454
Query: 395 CGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLI 452
G L+ A + M S W S++ G HG+ + A ++ R L + E S L+
Sbjct: 455 TGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLL 514
Query: 453 SLLQA 457
S + A
Sbjct: 515 SNIYA 519
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 255/484 (52%), Gaps = 9/484 (1%)
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
S+N L+++Y + ++ + PD+ T +C + + GK IHG +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 274 IRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAI 332
+MG D+ +LV Y ++ A K+F + +D V + ++TG+ + L EA+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 333 NVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 392
+ F KM V PN+A ++ ++ + + + L + IHG +L+ + +E N +I Y
Sbjct: 193 DTFS---KMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 393 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTL 451
KC L A VF + +D VSW SMI+G VH EAI LF L+Q + ++ D L
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 452 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 511
S+L A + LG + + VH A + + +++ YAKCG + A +F +
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 369
Query: 512 RCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQ 570
+ + +WNA+LG A+HG+ E L+ F M KLG KP+ +TF + L AC H+GLV+EG +
Sbjct: 370 KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG-FKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 571 IFRSM-IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRL 629
F M REY + P HY C+IDLL RAG L EA LVK+MP +LSAC+
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 630 YGD-TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGY 688
G E+ + I L +E +S YVL+SNI A RWD+VA IR + K K + PG
Sbjct: 489 RGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGS 548
Query: 689 SLIE 692
S IE
Sbjct: 549 SYIE 552
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 169/331 (51%), Gaps = 10/331 (3%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
Y ++ FS D K+C + GK++H K+ D +V +SL+ Y
Sbjct: 94 YKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGV 153
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
G+ +A +VF E+ +D+V++T IIT + +G +Y T + PN T V
Sbjct: 154 CGESRNACKVFGEMPVRDVVSWTGIITGFTRTG---LYK--EALDTFSKMDVEPNLATYV 208
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
+L ++ ++G L G+ IHG ++R + E L+DMY KC + A VFG++
Sbjct: 209 CVLVSSGRVGCLSLGKGIHGLILKRASLISLET-GNALIDMYVKCEQLSDAMRVFGELEK 267
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLANAILSCAELDYLCHG 266
SWN +I+ +H ++ EA +LF M + PD L + + +CA L + HG
Sbjct: 268 KDKV--SWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 325
+ +H Y++ G++ D TA+VD+Y+K + A ++F +R+K+ +N ++ G +
Sbjct: 326 RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIH 385
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+E++ F EM+K+ PN+ FL ++A
Sbjct: 386 GHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 64/363 (17%)
Query: 7 SITGNLVASCRRRHYGEVLRRY--LDLKNSKFSLDCSAITLCLKSCVALGRLEFG---KR 61
S TG + R Y E L + +D++ + + C ++ C++LG+ G KR
Sbjct: 174 SWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKR 233
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG 121
+ S++ G++LI +Y + +L DA RVF E+ KD V++ S+I+ H
Sbjct: 234 ASLISLE--------TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER 285
Query: 122 SCVYGAFRIASTMQDQR-LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI 180
S A + S MQ + P+ L S+L A A LG++ GR +H Y + G D
Sbjct: 286 S--KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK-WDTH 342
Query: 181 FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
T ++DMY KCG ++ A +F + S V +WN L+ +G LE+ F +M+
Sbjct: 343 IGTAIVDMYAKCGYIETALEIFNGIR--SKNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Query: 241 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKA 300
P+L+T A+ +C CH T LVD +
Sbjct: 401 LGFKPNLVTFLAALNAC------CH--------------------TGLVD--------EG 426
Query: 301 RKMFERLRNKDAVI------YNVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNL 353
R+ F ++++++ + Y M+ + L EA+ E++K M V P+V + +
Sbjct: 427 RRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL----ELVKAMPVKPDVRICGAI 482
Query: 354 ISA 356
+SA
Sbjct: 483 LSA 485
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 188/710 (26%), Positives = 330/710 (46%), Gaps = 112/710 (15%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLN-LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD 105
L+SC + R ++ + +K L+S V + L+++YS GK+ A +FDE+ +++
Sbjct: 33 LQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRN 92
Query: 106 LVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
++ ++I Y +SG + R M ++ Y V +
Sbjct: 93 YFSWNTMIEGYMNSGEKGT--SLRFFDMMPERDGYSWNVV-------------------V 131
Query: 166 HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
G+A K G + +A +F M V + N L+ Y+ N
Sbjct: 132 SGFA---------------------KAGELSVARRLFNAM--PEKDVVTLNSLLHGYILN 168
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
G A EA LF+++ D +TL + +CAEL+ L GK IH ++ GVE D
Sbjct: 169 GYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 286 TALVDLYSKFD--------------------------------VTKARKMFERLRNKDAV 313
++LV++Y+K V ++R +F+R N+ +
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
++N M++GY+ N++ +EA+ +F+EM + + +I+A L + + +H +
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 374 LRHQYITRVEIA-------------------------------NQIIHTYAKCGYLQYAR 402
+ I + +A N +I Y CG + A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
VF R+ ++ L+SW SM G+ +G E + F + + +L D V+L S++ A + +
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
L ++V + V++SLI Y KCG + R +F M + WN+M+
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
YA +G E + LF M + I+P ++TF +LTAC++ GLVEEG ++F SM ++ V
Sbjct: 525 GYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFV 584
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 642
P + H++C++DLL+RAG + EA NLV+ MP + ++L C G +G+ A++
Sbjct: 585 PDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEK 644
Query: 643 ILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
I++LEP NS +YV +S I A G W+ A +R + ++ + PG S +
Sbjct: 645 IIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 219/469 (46%), Gaps = 70/469 (14%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E LR + +L FS D +T LK+C L L+ GK++H + + D + SSL+
Sbjct: 173 EALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLV 229
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG--------------------GS 122
+Y++ G L A + ++I D + +++I+ YA+ G S
Sbjct: 230 NVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNS 289
Query: 123 CVYG---------AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG 173
+ G A + + M+++ +R TL ++++A LG L+ G+ +H +A +
Sbjct: 290 MISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACK-- 346
Query: 174 FGVCDEI-FETTLLDMYHKCGGVKMAAAVFGKMNATST---------------------- 210
FG+ D+I +TLLDMY KCG A +F ++ + T
Sbjct: 347 FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRV 406
Query: 211 -------TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELDY 262
++ SWN + + NG +E E F QM H+ LP D ++L++ I +CA +
Sbjct: 407 FERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM-HKLDLPTDEVSLSSVISACASISS 465
Query: 263 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTG 321
L G+ + +G++ D V ++L+DLY K V R++F+ + D V +N M++G
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI-HGYVLRHQYIT 380
Y N EAI++F +M + P F+ +++A + + R + + H ++
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 381 RVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGH 428
E + ++ A+ GY++ A LV D W+S++ G V +G+
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/594 (21%), Positives = 236/594 (39%), Gaps = 151/594 (25%)
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
V LL + + R +G +++GF I LL MY + G + +A +F +M
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM- 88
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
SWN +I Y+++G+ + F M R
Sbjct: 89 -PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER------------------------- 122
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
D + +V ++K +++ AR++F + KD V N ++ GY+ N
Sbjct: 123 --------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
EA+ +F E+ + S + ++ A ++L ++ + IH +L ++
Sbjct: 169 GYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 386 NQIIHTYAKCGYLQYA-------------------------------RLVFNRMRSRDLV 414
+ +++ YAKCG L+ A R +F+R +R ++
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 474
W SMI+GY+ + EA++LF ++ E R DS TL +++ A LG L K++HC
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRNET-REDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 475 -------------------------------YRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+ + + NS+I Y CG+++ A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS--- 560
+F+++ + L SWN+M ++ +G E L+ F+ M ++ DE++ +S+++AC+
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 561 --------------------------------HSGLVEEGLQIFRSMIREYTIVPGEVHY 588
G VE G ++F +M++ EV +
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK-----SDEVPW 519
Query: 589 NCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAI 639
N +I + GQ EA +L K M + +L+AC G E G +
Sbjct: 520 NSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 169/379 (44%), Gaps = 45/379 (11%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYG--------- 89
D + + +C+ LG LE GK++H + K L D V S+L+ +YS+ G
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 90 ----------------------KLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGA 127
+++DA RVF+ I NK L+++ S+ ++ +G C
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG--CTVET 434
Query: 128 FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLD 187
M L + V+L S++ A A + SL+ G + A G D++ ++L+D
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLD-SDQVVSSSLID 493
Query: 188 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
+Y KCG V+ VF M + WN +I+ Y NGQ EA +LF++M + P
Sbjct: 494 LYCKCGFVEHGRRVFDTMVKSDEV--PWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQ 551
Query: 248 LTLANAILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKFD-VTKARKMFE 305
+T + +C + G+ + M + G PD + +VDL ++ V +A + E
Sbjct: 552 ITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVE 611
Query: 306 RLR-NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA-LFLNLISAVS-DLRD 362
+ + D +++ ++ G + N ++I++ +VA + L+ I A S D
Sbjct: 612 EMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWES 671
Query: 363 IRLARSIHGYVLRHQYITR 381
L R + +R +T+
Sbjct: 672 SALVRKL----MRENNVTK 686
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/614 (28%), Positives = 317/614 (51%), Gaps = 13/614 (2%)
Query: 1 MNMKHPSITGNLVASCRRRHYGEVLRRYLD-LKNSKFSLDCSAITLCLKSCVALGRLEFG 59
++ K+P I + R++ EV LD L+ ++ + + L++CV L G
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 60 KRVHVDSIKLN-LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH 118
K+VHV I++N L S+ F+ + L+ +Y+ G ++DA +VFDE T+ ++ ++ +++
Sbjct: 131 KQVHVH-IRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
SG + M++ + N +L ++ + A +L++G H AI+ G+ +
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKN--GLFN 247
Query: 179 EIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
+F +T+L+DMY KCG V +A VF ++ V W +IA HN + EA LFR
Sbjct: 248 SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVV--WGAMIAGLAHNKRQWEALGLFRT 305
Query: 238 MI-HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSK 294
MI K+ P+ + L + ++ L GK +H ++++ VE V + L+DLY K
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVH-SGLIDLYCK 364
Query: 295 F-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
D+ R++F + ++A+ + +M+GY N +A+ M + P+V +
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+ ++LR I+ + IH Y L++ ++ V + ++ Y+KCG +Y +F+R+ R++
Sbjct: 425 LPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
+WT+MI YV + + I +FRL+ R DSVT+ +L S L L KE+H
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
+ V+ +I Y KCG L A + F + + +W A++ AY + + +
Sbjct: 545 ILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDA 604
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
+ F M P+ TFT++L+ CS +G V+E + F M+R Y + P E HY+ +I+
Sbjct: 605 INCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIE 664
Query: 594 LLSRAGQLTEAYNL 607
LL+R G++ EA L
Sbjct: 665 LLNRCGRVEEAQRL 678
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 282/591 (47%), Gaps = 46/591 (7%)
Query: 136 DQRLYP-NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+QR P N T +LL A + SL G+ +H + IR +E T L+ MY CG
Sbjct: 103 EQRGIPVNATTFSALLEACVRRKSLLHGKQVHVH-IRINGLESNEFLRTKLVHMYTACGS 161
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQA--LEAFELFRQMIHRKVLPDLLTLAN 252
VK A VF + +TS+ V SWN L+ + +G+ + F +M V ++ +L+N
Sbjct: 162 VKDAQKVFDE--STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 311
S A L G H I+ G+ + T+LVD+Y K V AR++F+ + +D
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
V++ M+ G N EA+ +F MI + + PN + ++ + D++ ++L + +H
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 371 GYVLRHQ-YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 429
+VL+ + Y+ + + + +I Y KCG + R VF + R+ +SWT++++GY +G
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 489
D+A+ +Q+E R D VT+ ++L ++L + KE+HC + +S+ SL
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSL 459
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 549
+ Y+KCG LF ++ +R + +W AM+ Y + + +++F M L +PD
Sbjct: 460 MVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDS 519
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMI-REYTIVP-------------GEVHY-NCIIDL 594
+T +LT CS ++ G ++ ++ +E+ +P G++ N D
Sbjct: 520 VTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDA 579
Query: 595 LSRAGQLT-----EAY----------NLVKSMPS---THSSAALCTLLSACRLYGDTEIG 636
++ G LT EAY N + M S T ++ +LS C G +
Sbjct: 580 VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 637 EAIAKQILK---LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 684
+L+ L+P + Y L+ +L GR +E + M+ L++
Sbjct: 640 YRFFNLMLRMYNLQP-SEEHYSLVIELLNRCGRVEEAQRLAVMSSSSSLQT 689
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 297/573 (51%), Gaps = 26/573 (4%)
Query: 129 RIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDM 188
R S + +R++ R L K +L + + +H IRR D L+
Sbjct: 8 RAPSWVSSRRIFEER------LQDLPKCANLNQVKQLHAQIIRRNLHE-DLHIAPKLISA 60
Query: 189 YHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
C +A VF ++ + + N LI A+ N Q +AF +F +M + D
Sbjct: 61 LSLCRQTNLAVRVFNQVQEPNVHLC--NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNF 118
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFE 305
T + +C+ +L K +H ++ ++G+ D+ AL+D YS+ V A K+FE
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
++ +D V +N M+ G +K +A +F EM + +LIS + L
Sbjct: 179 KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----------DLISWNTMLDGYAR 228
Query: 366 ARSI-HGYVLRHQYITRVEIA-NQIIHTYAKCGYLQYARLVFNRMR--SRDLVSWTSMIT 421
R + + L + R ++ + ++ Y+K G ++ AR++F++M ++++V+WT +I
Sbjct: 229 CREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIA 288
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
GY G + EA L + L+ D+ +IS+L A ++ G LS +H + R+ G
Sbjct: 289 GYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGS 348
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
V N+L+ YAKCG L A +F + ++ L SWN ML +HG+ E ++LF+ M+
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
I+PD++TF ++L +C+H+GL++EG+ F SM + Y +VP HY C++DLL R G+L
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRL 468
Query: 602 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 661
EA +V++MP + LL ACR++ + +I + + ++KL+P + +Y L+SNI
Sbjct: 469 KEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIY 528
Query: 662 AEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
A W+ VA IR+ K ++ G S +EL+
Sbjct: 529 AAAEDWEGVADIRSKMKSMGVEKPSGASSVELE 561
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 260/550 (47%), Gaps = 41/550 (7%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L C L ++ K++H I+ NL+ D + LI S + A RVF+++ ++
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
S+I A+A + S Y AF + S MQ L+ + T LL A + L + +H
Sbjct: 83 HLCNSLIRAHAQN--SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCG--GVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 224
+ + G D L+D Y +CG GV+ A +F KM+ T SWN ++ +
Sbjct: 141 NHIEKLGLS-SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV--SWNSMLGGLVK 197
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
G+ +A LF +M R ++ T+ + C E+ K+ + E + V+
Sbjct: 198 AGELRDARRLFDEMPQRDLI-SWNTMLDGYARCREM-----SKAFE--LFEKMPERNTVS 249
Query: 285 CTALVDLYSKF-DVTKARKMFER--LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
+ +V YSK D+ AR MF++ L K+ V + +++ GY + L EA + +M+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
+ + A +++++A ++ + L IH + R + + N ++ YAKCG L+ A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 402 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 461
VFN + +DLVSW +M+ G HGH EAI LF ++RE +R D VT I++L + +
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 462 GCLS-------AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERC 513
G + ++++V+ L + H L+ + G+L A + Q M E
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEH------YGCLVDLLGRVGRLKEAIKVVQTMPMEPN 483
Query: 514 LTSWNAMLGAYAMHGNYAEVLK--LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
+ W A+LGA MH N ++ K L N +KL P + S + A + EG+
Sbjct: 484 VVIWGALLGACRMH-NEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDW---EGVAD 539
Query: 572 FRSMIREYTI 581
RS ++ +
Sbjct: 540 IRSKMKSMGV 549
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 22/307 (7%)
Query: 34 SKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED 93
S D +A+ L +C G L G R+H + NL S+ +V ++L+ +Y++ G L+
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 94 AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG--AFRIASTMQDQRLYPNRVTLVSLLH 151
A VF++I KDLV++ +++ H G +G A + S M+ + + P++VT +++L
Sbjct: 369 AFDVFNDIPKKDLVSWNTML----HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 152 AAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMNATST 210
+ G + EG + Y++ + + + ++ L+D+ + G +K A V M
Sbjct: 425 SCNHAGLIDEG-IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPN 483
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLANAILSCAELDYLCHG-KS 268
V W L+ A + + A E+ ++ P +L + I + AE D+ G
Sbjct: 484 VV-IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE-DW--EGVAD 539
Query: 269 IHGYMIRMGVE-PDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 327
I M MGVE P + L D +F V F++ K IY M+ ++
Sbjct: 540 IRSKMKSMGVEKPSGASSVELEDGIHEFTV------FDKSHPKSDQIYQ-MLGSLIEPPD 592
Query: 328 PVEAINV 334
P E + V
Sbjct: 593 PGELVAV 599
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 280/521 (53%), Gaps = 7/521 (1%)
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
I T L+ Y + G V+ A ++F +M V +W +I Y + A+E F +M+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEM--PDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT- 298
+ P+ TL++ + SC + L +G +HG ++++G+E + A++++Y+ VT
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 299 -KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
A +F ++ K+ V + ++TG+ + + ++ +M+ + + A
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
+ + + + IH V++ + + + + N I+ Y +CGYL A+ F+ M +DL++W
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
++I+ + EA+++F+ + + + T SL+ A + + L+ +++H +R
Sbjct: 284 TLIS-ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER-CLTSWNAMLGAYAMHGNYAEVLKL 536
K + + N+LI YAKCG + ++ +F ++ +R L SW +M+ Y HG AE ++L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F+ M I+PD + F ++L+AC H+GLVE+GL+ F M EY I P YNC++DLL
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG-DTEIGEAIAKQILKLEPRNSSSYV 655
RAG++ EAY LV+ MP + +L AC+ + + I A+++++L+P+ +YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 656 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
++S I A G+W + A +R M + K G S I ++ Q
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 246/478 (51%), Gaps = 16/478 (3%)
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
+ ++LI Y E G +E+A +FDE+ ++D+VA+T++IT YA S + A+ M
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNA--RAWECFHEMVK 104
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGV 195
Q PN TL S+L + + L G +HG ++ G+ ++ + +++MY C V
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK--LGMEGSLYVDNAMMNMYATC-SV 161
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI--HRKVLPDLLTLANA 253
M AA + +W LI + H G + ++++QM+ + +V P +T+ A
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--A 219
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 312
+ + A +D + GK IH +I+ G + ++ +++DLY + +++A+ F + +KD
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
+ +N +++ ++D EA+ +F PN F +L++A +++ + + +HG
Sbjct: 280 ITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSRDLVSWTSMITGYVHHGHIDE 431
+ R + VE+AN +I YAKCG + ++ VF + R+LVSWTSM+ GY HG+ E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLI 490
A+ LF + +R D + +++L A G + +K + + + + N ++
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 491 TTYAKCGKLNMARYLFQQMTERC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
+ GK+ A L ++M + ++W A+LGA H + + +L K+ +KP
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAAR-KVMELKP 515
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 192/392 (48%), Gaps = 21/392 (5%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYG-KLEDAHRVFDEITNKD 105
LKSC + L +G VH +KL + +V ++++ +Y+ +E A +F +I K+
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177
Query: 106 LVAYTSIITAYAHSGGSCVYGAFRIASTM--QDQRLYPNRVTLVSLLHAAAKLGSLQEGR 163
V +T++IT + H G G ++ M ++ + P +T+ + A+A + S+ G+
Sbjct: 178 DVTWTTLITGFTHLGDGI--GGLKMYKQMLLENAEVTPYCITIA--VRASASIDSVTTGK 233
Query: 164 AIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
IH I+RGF + ++LD+Y +CG + A F +M +WN LI+ L
Sbjct: 234 QIHASVIKRGFQSNLPVM-NSILDLYCRCGYLSEAKHYFHEMEDKDLI--TWNTLISE-L 289
Query: 224 HNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV 283
+ EA +F++ + +P+ T + + +CA + L G+ +HG + R G ++
Sbjct: 290 ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE 349
Query: 284 ACTALVDLYSKF-DVTKARKMF-ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
AL+D+Y+K ++ ++++F E + ++ V + MM GY + EA+ +F +M+
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGY--VLRHQYITRV--EIANQIIHTYAKCGY 397
+ P+ +F+ ++SA R L Y V+ +Y +I N ++ + G
Sbjct: 410 GIRPDRIVFMAVLSAC---RHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 398 LQYARLVFNRMRSR-DLVSWTSMITGYVHHGH 428
+ A + RM + D +W +++ H H
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 9/282 (3%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
L+N++ + C IT+ +++ ++ + GK++H IK S+ V +S++ LY G
Sbjct: 206 LENAEVTPYC--ITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGY 263
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
L +A F E+ +KDL+ + ++I+ S S A + + Q PN T SL+
Sbjct: 264 LSEAKHYFHEMEDKDLITWNTLISELERSDSS---EALLMFQRFESQGFVPNCYTFTSLV 320
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
A A + +L G+ +HG RRGF E+ L+DMY KCG + + VFG++
Sbjct: 321 AACANIAALNCGQQLHGRIFRRGFNKNVEL-ANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
V SW ++ Y +G EA ELF +M+ + PD + + +C + G
Sbjct: 380 LV-SWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF 438
Query: 271 GYM-IRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 310
M G+ PD +VDL + + +A ++ ER+ K
Sbjct: 439 NVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK 480
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 257/482 (53%), Gaps = 12/482 (2%)
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAELDYLCHGKSIHGYMI 274
N +I AYL Q ++F L+R + PD T SC+ + G +H +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 275 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
R G DM T +VD+Y+KF + AR F+ + ++ V + +++GY++ A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
+F +M + +V ++ ++ D+ AR + + IT +IH Y
Sbjct: 166 LFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWT----TMIHGYC 218
Query: 394 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ-RENLRIDSVTLI 452
+ AR +F+ M R+LVSW +MI GY + E I LF+ +Q +L D VT++
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 453 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 512
S+L A+S G LS + HC R K++ V +++ Y+KCG++ A+ +F +M E+
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Query: 513 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 572
+ SWNAM+ YA++GN L LF M + KPDE+T +++TAC+H GLVEEG + F
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWF 397
Query: 573 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 632
M RE + HY C++DLL RAG L EA +L+ +MP + L + LSAC Y D
Sbjct: 398 HVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKD 456
Query: 633 TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
E E I K+ ++LEP+N +YVL+ N+ A RWD+ ++ + + + K G SLIE
Sbjct: 457 IERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
Query: 693 LD 694
++
Sbjct: 517 IN 518
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 161/342 (47%), Gaps = 18/342 (5%)
Query: 19 RHYGEVLRRYLDL-KNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFV 77
R Y + Y DL K + F+ D T KSC + G ++H + +D +V
Sbjct: 56 RQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYV 115
Query: 78 GSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQ 137
+ ++ +Y+++GK+ A FDE+ ++ V++T++I+ Y G +AS + DQ
Sbjct: 116 STGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRC------GELDLASKLFDQ 169
Query: 138 RLYPNRVTLV-SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
+ V + +++ K G + R + + I TT++ Y +
Sbjct: 170 MPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV-----ITWTTMIHGYCNIKDID 224
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAIL 255
A +F M + SWN +I Y N Q E LF++M L PD +T+ + +
Sbjct: 225 AARKLFDAM--PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLP 282
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 314
+ ++ L G+ H ++ R ++ + CTA++D+YSK ++ KA+++F+ + K
Sbjct: 283 AISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS 342
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+N M+ GY N A+++F M+ + P+ L +I+A
Sbjct: 343 WNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITA 383
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 8/236 (3%)
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD--LVSWTSMITGYVHHGHID 430
+LRH T V+I + + A + YAR +F++ RD +S SMI Y+
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 431 EAIILFRLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 489
++ L+R L++E D+ T +L ++ S C+ ++H +R ++ V+ +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 549
+ YAK GK+ AR F +M R SW A++ Y G KLF+ M ++K D
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMP--HVK-DV 176
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIV-PGEVHYNCIIDLLSRAGQLTEA 604
+ + +++ SG + ++F M + I +H C I + A +L +A
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDA 232
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITL--CLKSCVALGRLEFGKRVHVDSIKLNLNS 73
C+ + E +R + +++ + SLD +T+ L + G L G+ H + L+
Sbjct: 249 CQNKQPQEGIRLFQEMQATT-SLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK 307
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
V ++++ +YS+ G++E A R+FDE+ K + ++ ++I YA +G + A + T
Sbjct: 308 KVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA--RAALDLFVT 365
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 192
M + P+ +T+++++ A G ++EGR + + R G+ +I ++D+ +
Sbjct: 366 MMIEE-KPDEITMLAVITACNHGGLVEEGR--KWFHVMREMGLNAKIEHYGCMVDLLGRA 422
Query: 193 GGVKMAAAVFGKM 205
G +K A + M
Sbjct: 423 GSLKEAEDLITNM 435
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 254/483 (52%), Gaps = 1/483 (0%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
+N LI +++N E +LF + + T + +C G +H ++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 275 RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
+ G D+ A T+L+ +YS + A K+F+ + ++ V + + +GY + EAI+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
+F +M++M V P+ + ++SA + D+ I Y+ + + +++ YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 394 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 453
KCG ++ AR VF+ M +D+V+W++MI GY + E I LF + +ENL+ D +++
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
L + + LG L + L R L + N+LI YAKCG + +F++M E+
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
+ NA + A +G+ +F + I PD TF +L C H+GL+++GL+ F
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 633
++ Y + HY C++DL RAG L +AY L+ MP ++ LLS CRL DT
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498
Query: 634 EIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
++ E + K+++ LEP N+ +YV +SNI + GGRWDE A +R M K +K PGYS IEL
Sbjct: 499 QLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIEL 558
Query: 694 DKQ 696
+ +
Sbjct: 559 EGK 561
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 202/408 (49%), Gaps = 11/408 (2%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
K++HV I +L+ D F+ + L++ + + + ++ +F ++ Y S+I + ++
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
+ + +++ LY + T +L A + S + G +H ++ GF D
Sbjct: 90 --HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFN-HDV 146
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
T+LL +Y G + A +F ++ S V +W L + Y +G+ EA +LF++M+
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRS--VVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVT 298
V PD + + +C + L G+ I YM M ++ + T LV+LY+K +
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 299 KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
KAR +F+ + KD V ++ M+ GY N P E I +F +M++ ++ P+ + +S+ +
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
L + L + RH+++T + +AN +I YAKCG + VF M+ +D+V +
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 466
I+G +GH+ + +F ++ + D T + LL GC+ A
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL-----CGCVHA 427
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 192/409 (46%), Gaps = 16/409 (3%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+ E L +L ++ L L LK+C + G +H +K N D +S
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
L+ +YS G+L DAH++FDEI ++ +V +T++ + Y SG A + M + +
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH--REAIDLFKKMVEMGVK 209
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ +V +L A +G L G I Y + TTL+++Y KCG ++ A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK-NSFVRTTLVNLYAKCGKMEKARS 268
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
VF M + +W+ +I Y N E ELF QM+ + PD ++ + SCA L
Sbjct: 269 VFDSM--VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMM 319
L G+ + R ++ AL+D+Y+K + + ++F+ ++ KD VI N +
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA---VSDLRD-IRLARSIHG-YVL 374
+G KN + VF + K+ +SP+ + FL L+ ++D +R +I Y L
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITG 422
+ VE ++ + + G L A RL+ + + + W ++++G
Sbjct: 447 KRT----VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 165/348 (47%), Gaps = 2/348 (0%)
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYL 323
H K IH +I + D L+ F TK + +F + + +YN ++ G++
Sbjct: 28 HLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFV 87
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
N L E +++F + K + + F ++ A + +L +H V++ + V
Sbjct: 88 NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
++ Y+ G L A +F+ + R +V+WT++ +GY G EAI LF+ +
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
++ DS ++ +L A +G L + + + K V +L+ YAKCGK+ AR
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
+F M E+ + +W+ M+ YA + E ++LF M N+KPD+ + L++C+ G
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
++ G + S+I + + N +ID+ ++ G + + + K M
Sbjct: 328 ALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/560 (29%), Positives = 274/560 (48%), Gaps = 44/560 (7%)
Query: 178 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
D + L+ Y + + A VF ++ T S+N L+ AY +AF LF
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEI--TVRNAFSYNALLIAYTSREMYFDAFSLFLS 113
Query: 238 MIHRKVL------PDLLTLA---NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 288
I PD ++++ A+ C + + +HG++IR G + D+ +
Sbjct: 114 WIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGM 173
Query: 289 VDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPN 346
+ Y+K D + ARK+F+ + +D V +N M++GY ++ + ++ M+ S PN
Sbjct: 174 ITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 347 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 406
+++ A D+ +H ++ + + + N +I YAKCG L YAR +F+
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 407 RMRSRDLVSWTSMITGYVHHGHIDEAIILF------------------------------ 436
M +D V++ ++I+GY+ HG + EA+ LF
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 437 -RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 495
R + R R ++VTL SLL +L+ L KE+H R + V S+I YAK
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 496 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 555
G L A+ +F +R L +W A++ AYA+HG+ LF+ M+ KPD++T T++
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
L+A +HSG + IF SM+ +Y I PG HY C++ +LSRAG+L++A + MP
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 616 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 675
+ LL+ + GD EI ++ ++EP N+ +Y +++N+ + GRW+E +R
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 676 MTKDKELKSTPGYSLIELDK 695
K LK PG S IE +K
Sbjct: 594 KMKRIGLKKIPGTSWIETEK 613
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 257/566 (45%), Gaps = 60/566 (10%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG 120
++H + ++ D F+ S LI Y+ + A VFDEIT ++ +Y +++ AY +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAY--TS 100
Query: 121 GSCVYGAFRI------ASTMQDQRLYPNRVTLVSLLHAAAK-----LGSLQEGRAIHGYA 169
+ AF + +S P+ +++ +L A + LGSL R +HG+
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFV 158
Query: 170 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQAL 229
IR GF D ++ Y KC ++ A VF +M + V SWN +I+ Y +G
Sbjct: 159 IRGGFD-SDVFVGNGMITYYTKCDNIESARKVFDEM--SERDVVSWNSMISGYSQSGSFE 215
Query: 230 EAFELFRQMIH-RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 288
+ ++++ M+ P+ +T+ + +C + L G +H MI ++ D+ C A+
Sbjct: 216 DCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 289 VDLYSKF-DVTKARKMFERLRNKDAVIY-------------------------------N 316
+ Y+K + AR +F+ + KD+V Y N
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 376
M++G ++N+ E IN F EMI+ PN +L+ +++ +++ + IH + +R+
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 377 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 436
+ + II YAK G+L A+ VF+ + R L++WT++IT Y HG D A LF
Sbjct: 396 GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF 455
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH---CLTYRAFHGKELSVNNSLITTY 493
+Q + D VTL ++L A + G + + Y G E +++
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYA--CMVSVL 513
Query: 494 AKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL-T 551
++ GKL+ A +M + W A+L ++ G+ E+ + F +L ++P+
Sbjct: 514 SRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDL-EIAR-FACDRLFEMEPENTGN 571
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIR 577
+T + + +G EE + M R
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKMKR 597
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 15/324 (4%)
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYL 323
H +H ++ ++PD + L+ Y++ D +A +F+ + ++A YN ++ Y
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 324 KNDLPVEAINVFHEMIKMSV---------SPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
++ +A ++F I S S +++ L +S D LAR +HG+V+
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 434
R + + V + N +I Y KC ++ AR VF+ M RD+VSW SMI+GY G ++
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 435 LFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 493
+++ +L + + + VT+IS+ QA Q L EVH +LS+ N++I Y
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 494 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
AKCG L+ AR LF +M+E+ ++ A++ Y HG E + LF+ M+ + T+
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWN 335
Query: 554 SILTACSHSGLVEEGLQIFRSMIR 577
++++ + EE + FR MIR
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIR 359
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 189/422 (44%), Gaps = 42/422 (9%)
Query: 37 SLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHR 96
S+ S + L C ++VH I+ +SD FVG+ +I Y++ +E A +
Sbjct: 129 SISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARK 188
Query: 97 VFDEITNKDLVAYTSIITAYAHSGG--SC--VYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
VFDE++ +D+V++ S+I+ Y+ SG C +Y A S + PN VT++S+ A
Sbjct: 189 VFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFK-----PNGVTVISVFQA 243
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN-ATSTT 211
+ L G +H I + D ++ Y KCG + A A+F +M+ S T
Sbjct: 244 CGQSSDLIFGLEVHKKMIENHIQM-DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT 302
Query: 212 VG----------------------------SWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
G +WN +I+ + N E FR+MI
Sbjct: 303 YGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS 362
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARK 302
P+ +TL++ + S L GK IH + IR G + ++ T+++D Y+K + A++
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
+F+ +++ + + ++T Y + A ++F +M + P+ ++SA + D
Sbjct: 423 VFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGD 482
Query: 363 IRLARSIHGYVL-RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMI 420
+A+ I +L ++ VE ++ ++ G L A ++M + W +++
Sbjct: 483 SDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALL 542
Query: 421 TG 422
G
Sbjct: 543 NG 544
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Query: 295 FDVTKARKMFERLRNKDAV---IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
F++ +A + L NK AV Y ++ + ++ LP+ + + ++ S+ P+ L
Sbjct: 5 FEIQRA---LQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLAS 61
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
LIS + TR + Q +H VF+ + R
Sbjct: 62 KLIS----------------------FYTRQDRFRQALH-------------VFDEITVR 86
Query: 412 DLVSWTSMITGYVHHGHIDEAIILF------RLLQRENLRIDSVTLISLLQALSQLGCL- 464
+ S+ +++ Y +A LF + R DS+++ +L+ALS GC
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALS--GCDD 144
Query: 465 ----SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 520
S ++VH R ++ V N +IT Y KC + AR +F +M+ER + SWN+M
Sbjct: 145 FWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSM 204
Query: 521 LGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 579
+ Y+ G++ + K++ M + KP+ +T S+ AC S + GL++ + MI +
Sbjct: 205 ISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH 264
Query: 580 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 616
+ + N +I ++ G L A L M S
Sbjct: 265 IQMDLSL-CNAVIGFYAKCGSLDYARALFDEMSEKDS 300
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 37/254 (14%)
Query: 34 SKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED 93
S F + + ++C L FG VH I+ ++ D + +++I Y++ G L+
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 94 AHRVFDEITNKDLVAYTSIITAYAHSG---------------GSCVYGAFRIASTMQDQR 138
A +FDE++ KD V Y +II+ Y G G + A I+ MQ+
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM-ISGLMQNNH 346
Query: 139 ---------------LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFET 183
PN VTL SLL + +L+ G+ IH +AIR G + I+ T
Sbjct: 347 HEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN--GADNNIYVT 404
Query: 184 T-LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
T ++D Y K G + A VF N ++ +W +I AY +G + A LF QM
Sbjct: 405 TSIIDNYAKLGFLLGAQRVFD--NCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG 462
Query: 243 VLPDLLTLANAILS 256
PD +TL A+LS
Sbjct: 463 TKPDDVTL-TAVLS 475
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
+ H+ EV+ + ++ + ++ L S L+ GK +H +I+ +++ +
Sbjct: 343 QNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIY 402
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
V +S+I Y++ G L A RVFD ++ L+A+T+IITAYA G S A + MQ
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDS--DSACSLFDQMQC 460
Query: 137 QRLYPNRVTLVSLLHAAAKLG 157
P+ VTL ++L A A G
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSG 481
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 261/482 (54%), Gaps = 43/482 (8%)
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERL 307
TL + + SC + H SIH +IR + D L+ + S D V A +F +
Sbjct: 31 TLISVLRSCKNI---AHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
N + +Y M+ G++ + + ++++H MI SV P+ + +++ A D+++ R
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCR 143
Query: 368 SIHGYVLRHQY-------ITRVEI------------------------ANQIIHTYAKCG 396
IH VL+ + + +EI A +I+ Y++CG
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 397 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 456
+++ A +F ++ +D V WT+MI G V + +++A+ LFR +Q EN+ + T + +L
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 457 ALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLNMARYLFQQMTERCL 514
A S LG L + VH ++ ELS V N+LI Y++CG +N AR +F+ M ++ +
Sbjct: 264 ACSDLGALELGRWVH--SFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 515 TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 574
S+N M+ AMHG E + F M +P+++T ++L ACSH GL++ GL++F S
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 575 MIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE 634
M R + + P HY CI+DLL R G+L EAY ++++P L TLLSAC+++G+ E
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 635 IGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
+GE IAK++ + E +S +YVL+SN+ A G+W E IR +D ++ PG S IE+D
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 695 KQ 696
Q
Sbjct: 502 NQ 503
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 205/469 (43%), Gaps = 46/469 (9%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
RR D + S + I++ L+SC + + +H I+ + D FV LIR+
Sbjct: 15 FRRDPDSNTLRLSRRKTLISV-LRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRV 70
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRV 144
S ++ A+ VF ++N ++ YT++I + SG S + M + P+
Sbjct: 71 CSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSA--DGVSLYHRMIHNSVLPDNY 128
Query: 145 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC--------------------------- 177
+ S+L A L+ R IH ++ GFG
Sbjct: 129 VITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEM 184
Query: 178 ---DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 234
D + T +++ Y +CG +K A +F + T W +I + N + +A EL
Sbjct: 185 PDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVC--WTAMIDGLVRNKEMNKALEL 242
Query: 235 FRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
FR+M V + T + +C++L L G+ +H ++ +E AL+++YS+
Sbjct: 243 FREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSR 302
Query: 295 F-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
D+ +AR++F +R+KD + YN M++G + VEAIN F +M+ PN + L
Sbjct: 303 CGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVAL 362
Query: 354 ISAVSDLRDIRLARSIHGYVLR-HQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSR 411
++A S + + + + R ++E I+ + G L+ A R + N
Sbjct: 363 LNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEP 422
Query: 412 DLVSWTSMITGYVHHGHID-EAIILFRLLQRENLRIDSVTLISLLQALS 459
D + ++++ HG+++ I RL + EN + L+S L A S
Sbjct: 423 DHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVH--VDSIKLNLNSD 74
R + + L + +++ S + L +C LG LE G+ VH V++ ++ L++
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSN- 290
Query: 75 CFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSC-VYGAFRIAST 133
FVG++LI +YS G + +A RVF + +KD+++Y ++I+ A G S FR
Sbjct: 291 -FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFR---D 346
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI 180
M ++ PN+VTLV+LL+A + G L G + +++R F V +I
Sbjct: 347 MVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN-SMKRVFNVEPQI 392
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 272 bits (696), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 288/577 (49%), Gaps = 69/577 (11%)
Query: 184 TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
T+L Y K G + F ++ + SW +I Y + GQ +A + M+ +
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSV--SWTTMIVGYKNIGQYHKAIRVMGDMVKEGI 142
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK--------- 294
P TL N + S A + GK +H +++++G+ ++ +L+++Y+K
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 295 -FDVTKARKM----------------------FERLRNKDAVIYNVMMTGYLKNDLPVEA 331
FD R + FE++ +D V +N M++G+ + + A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 332 INVFHEMIKMSV-SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
+++F +M++ S+ SP+ +++SA ++L + + + IH +++ + + N +I
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 391 TYAKCGYLQYARL---------------------------------VFNRMRSRDLVSWT 417
Y++CG ++ AR +F ++ RD+V+WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
+MI GY HG EAI LFR + R +S TL ++L S L LS K++H ++
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKL 536
+SV+N+LIT YAK G + A F + ER SW +M+ A A HG+ E L+L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F M + ++PD +T+ + +AC+H+GLV +G Q F M I+P HY C++DL
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 656
RAG L EA ++ MP +LLSACR++ + ++G+ A+++L LEP NS +Y
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
++N+ + G+W+E A IR KD +K G+S IE+
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 339 IKMSVSPNVALFLNLISAVSDLRDIRL-ARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 397
+ +S+S + L NL+ + + R A+ +H V++ + V + N +++ Y+K GY
Sbjct: 5 VPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGY 64
Query: 398 LQYARLVFNRM-------------------------------RSRDLVSWTSMITGYVHH 426
+AR +F+ M RD VSWT+MI GY +
Sbjct: 65 ALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 486
G +AI + + +E + TL ++L +++ C+ K+VH + +SV+
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
NSL+ YAKCG MA+++F +M R ++SWNAM+ + G + F M +
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA----E 240
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
D +T+ S+++ + G L IF M+R+ + P
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 50/332 (15%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
L++S S D + L +C L +L GK++H + + V ++LI +YS G
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 91 LEDAHR---------------------------------VFDEITNKDLVAYTSIITAYA 117
+E A R +F + ++D+VA+T++I Y
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 118 HSGGSCVYG-AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV 176
G YG A + +M PN TL ++L A+ L SL G+ IHG A++ G
Sbjct: 390 QHGS---YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG--- 443
Query: 177 CDEIFETT----LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF 232
EI+ + L+ MY K G + A+ F + TV SW +I A +G A EA
Sbjct: 444 --EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV-SWTSMIIALAQHGHAEEAL 500
Query: 233 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDL 291
ELF M+ + PD +T +C + G+ M + + P + +VDL
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 292 YSKFD-VTKARKMFERLR-NKDAVIYNVMMTG 321
+ + + +A++ E++ D V + +++
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 249/484 (51%), Gaps = 42/484 (8%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
+N L+ Y + + + +F +M+ + V PD + A I + L G +H
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 274 IRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAI 332
++ G+E + T L+ +Y V ARK+F+ + + V +N ++T + +
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN------ 186
Query: 333 NVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 392
D+ AR I +L + + N ++ Y
Sbjct: 187 -----------------------------DVAGAREIFDKMLVRNHTS----WNVMLAGY 213
Query: 393 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 452
K G L+ A+ +F+ M RD VSW++MI G H+G +E+ + FR LQR + + V+L
Sbjct: 214 IKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 453 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE- 511
+L A SQ G K +H +A + +SVNN+LI Y++CG + MAR +F+ M E
Sbjct: 274 GVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK 333
Query: 512 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
RC+ SW +M+ AMHG E ++LFN M + PD ++F S+L ACSH+GL+EEG
Sbjct: 334 RCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDY 393
Query: 572 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 631
F M R Y I P HY C++DL R+G+L +AY+ + MP ++ TLL AC +G
Sbjct: 394 FSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG 453
Query: 632 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
+ E+ E + +++ +L+P NS VL+SN A G+W +VA IR + +K T +SL+
Sbjct: 454 NIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513
Query: 692 ELDK 695
E+ K
Sbjct: 514 EVGK 517
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 175/398 (43%), Gaps = 48/398 (12%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D + +K+ L G ++H ++K L S FVG++LI +Y G +E A +VF
Sbjct: 105 DSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVF 164
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
DE+ +LVA+ ++ITA G+ V GA I D+ L N + +L K G
Sbjct: 165 DEMHQPNLVAWNAVITACFR--GNDVAGAREIF----DKMLVRNHTSWNVMLAGYIKAGE 218
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
L+ + I R D++ SW+ +
Sbjct: 219 LESAKRIFSEMPHR-----DDV---------------------------------SWSTM 240
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 278
I HNG E+F FR++ + P+ ++L + +C++ GK +HG++ + G
Sbjct: 241 IVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY 300
Query: 279 EPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI-YNVMMTGYLKNDLPVEAINVFH 336
+ AL+D+YS+ +V AR +FE ++ K ++ + M+ G + EA+ +F+
Sbjct: 301 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFN 360
Query: 337 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQIIHTYAKC 395
EM V+P+ F++L+ A S I + R +I +E ++ Y +
Sbjct: 361 EMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 420
Query: 396 GYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEA 432
G LQ A +M + W +++ HG+I+ A
Sbjct: 421 GKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELA 458
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 280/548 (51%), Gaps = 16/548 (2%)
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG---GVKMAAAVFGKMNATSTTVGS 214
SL E +HG I+ + + I + L+D C + A +VF ++ S +
Sbjct: 18 SLVELNQLHGLMIKSSV-IRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYI-- 74
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN +I Y ++ +A +++M+ + PD T + +C+ L + G +HG+++
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 275 RMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
+ G E +M T L+ +Y +V ++FE + + V + +++G++ N+ +AI
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV--------LRHQYITRVEIA 385
F EM V N + ++L+ A +DI + HG++ + + V +A
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
+I YAKCG L+ AR +F+ M R LVSW S+ITGY +G +EA+ +F + +
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
D VT +S+++A GC + +H + K+ ++ +L+ YAK G A+
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374
Query: 506 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTACSHSGL 564
F+ + ++ +W ++ A HG+ E L +F M+ GN PD +T+ +L ACSH GL
Sbjct: 375 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 434
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
VEEG + F M + + P HY C++D+LSRAG+ EA LVK+MP + LL
Sbjct: 435 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 494
Query: 625 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 684
+ C ++ + E+ + I + + E S YVL+SNI A+ GRW +V IR K K +
Sbjct: 495 NGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK 554
Query: 685 TPGYSLIE 692
G+S +E
Sbjct: 555 VLGHSSVE 562
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 201/433 (46%), Gaps = 46/433 (10%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y E+LR+ +S D LK+C L ++FG VH +K + +V +
Sbjct: 95 YQEMLRK-------GYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTC 147
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG-SCVYGAFRIASTMQDQRL 139
L+ +Y G++ RVF++I ++VA+ S+I+ + ++ S AFR MQ +
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR---EMQSNGV 204
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV-------CDEIFETTLLDMYHKC 192
N +V LL A + + G+ HG+ GF + I T+L+DMY KC
Sbjct: 205 KANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL-- 250
G ++ A +F M T+ SWN +I Y NG A EA +F M+ + PD +T
Sbjct: 265 GDLRTARYLFDGM--PERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 251 ---ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 306
A+ I C++L G+SIH Y+ + G D ALV++Y+K D A+K FE
Sbjct: 323 VIRASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED 377
Query: 307 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDL----- 360
L KD + + V++ G + EA+++F M K + +P+ +L ++ A S +
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 361 --RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WT 417
R R +HG VE ++ ++ G + A + M + V+ W
Sbjct: 438 GQRYFAEMRDLHGLE------PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 418 SMITGYVHHGHID 430
+++ G H +++
Sbjct: 492 ALLNGCDIHENLE 504
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 291/536 (54%), Gaps = 44/536 (8%)
Query: 198 AAAVFGKMNATSTTVGS------WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
A VF + + S + G WN +I ++ H +A L M+ V D +L+
Sbjct: 66 ARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLS 125
Query: 252 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK 310
+ +C+ L ++ G IHG++ + G+ D+ L+ LY K + +R+MF+R+ +
Sbjct: 126 LVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR 185
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD-------- 362
D+V YN M+ GY+K L V A +F +++ M + N+ + ++IS + D
Sbjct: 186 DSVSYNSMIDGYVKCGLIVSARELF-DLMPMEMK-NLISWNSMISGYAQTSDGVDIASKL 243
Query: 363 ---------IRLARSIHGYVLRHQYI----------TRVEIAN--QIIHTYAKCGYLQYA 401
I I GYV +H I R ++ +I YAK G++ +A
Sbjct: 244 FADMPEKDLISWNSMIDGYV-KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHA 302
Query: 402 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQ 460
+ +F++M RD+V++ SM+ GYV + + EA+ +F +++E+ L D TL+ +L A++Q
Sbjct: 303 KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQ 362
Query: 461 LGCLSAVKEVHC-LTYRAFH-GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWN 518
LG LS ++H + + F+ G +L V +LI Y+KCG + A +F+ + + + WN
Sbjct: 363 LGRLSKAIDMHLYIVEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 519 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 578
AM+G A+HG + ++ ++KPD++TF +L ACSHSGLV+EGL F M R+
Sbjct: 421 AMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRK 480
Query: 579 YTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEA 638
+ I P HY C++D+LSR+G + A NL++ MP + T L+AC + + E GE
Sbjct: 481 HKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGEL 540
Query: 639 IAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
+AK ++ N SSYVL+SN+ A G W +V +R M K+++++ PG S IELD
Sbjct: 541 VAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 235/521 (45%), Gaps = 82/521 (15%)
Query: 98 FDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG 157
F E+ +D + ++I +++H G A + M + + ++ +L +L A ++LG
Sbjct: 80 FGEV--EDPFLWNAVIKSHSH--GKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNP 217
++ G IHG+ + G D + L+ +Y KCG + ++ +F +M + S+N
Sbjct: 136 FVKGGMQIHGFLKKTGLW-SDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSV--SYNS 192
Query: 218 LIAAYLHNGQALEAFELFRQM-IHRKVL-------------PDLLTLANAILS-CAELDY 262
+I Y+ G + A ELF M + K L D + +A+ + + E D
Sbjct: 193 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL 252
Query: 263 LCHGKSIHGYMIRMGVEP-----------DMVACTALVDLYSKFD-VTKARKMFERLRNK 310
+ I GY+ +E D+V ++D Y+K V A+ +F+++ ++
Sbjct: 253 ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 312
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSI 369
D V YN MM GY++N +EA+ +F +M K S + P+ + ++ A++ L + A +
Sbjct: 313 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 372
Query: 370 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 429
H Y++ Q+ ++ +I Y+KCG +Q+A LVF + ++ + W +MI G HG
Sbjct: 373 HLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 432
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLG-------CLSAVKEVHCLTYRAFHGKE 482
+ A + ++R +L+ D +T + +L A S G C ++ H + R H
Sbjct: 433 ESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH--- 489
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
++ ++ G + +A+ L ++M
Sbjct: 490 ---YGCMVDILSRSGSIELAKNLIEEMP-------------------------------- 514
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
++P+++ + + LTACSH E G + + +I + P
Sbjct: 515 --VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP 553
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 190/423 (44%), Gaps = 41/423 (9%)
Query: 37 SLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHR 96
S+D +++L LK+C LG ++ G ++H K L SD F+ + LI LY + G L + +
Sbjct: 118 SVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQ 177
Query: 97 VFDEITNKDLVAYTSIITAYAHSG----------------------GSCVYG------AF 128
+FD + +D V+Y S+I Y G S + G
Sbjct: 178 MFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGV 237
Query: 129 RIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDM 188
IAS + + ++ S++ K G +++ + + RR D + T++D
Sbjct: 238 DIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-----DVVTWATMIDG 292
Query: 189 YHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDL 247
Y K G V A +F +M V ++N ++A Y+ N +EA E+F M +LPD
Sbjct: 293 YAKLGFVHHAKTLFDQM--PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDD 350
Query: 248 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 306
TL + + A+L L +H Y++ AL+D+YSK + A +FE
Sbjct: 351 TTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG 410
Query: 307 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 366
+ NK +N M+ G + L A ++ ++ ++S+ P+ F+ +++A S ++
Sbjct: 411 IENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 367 RSIHGYVLR-HQYITRVEIANQIIHTYAKCGYLQYARLVFNRM--RSRDLVSWTSMITGY 423
+ R H+ R++ ++ ++ G ++ A+ + M D++ W + +T
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLTAC 529
Query: 424 VHH 426
HH
Sbjct: 530 SHH 532
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 144/302 (47%), Gaps = 11/302 (3%)
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
D +++I Y++ G + A +FD++ ++D+VAY S++ Y + A I S
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQN--KYHMEALEIFSD 339
Query: 134 MQ-DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC 192
M+ + L P+ TLV +L A A+LG L + +H Y + + F + ++ L+DMY KC
Sbjct: 340 MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKL-GVALIDMYSKC 398
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
G ++ A VF + S + WN +I +G AF++ Q+ + PD +T
Sbjct: 399 GSIQHAMLVFEGIENKS--IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVG 456
Query: 253 AILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKF-DVTKARKMFERLR-N 309
+ +C+ + G M R +EP + +VD+ S+ + A+ + E +
Sbjct: 457 VLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVE 516
Query: 310 KDAVIYNVMMTGYLKN-DLPVEAINVFHEMIKMSVSPNVALFL-NLISAVSDLRDIRLAR 367
+ VI+ +T + + + H +++ +P+ + L N+ ++ +D+R R
Sbjct: 517 PNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVR 576
Query: 368 SI 369
++
Sbjct: 577 TM 578
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 17 RRRHYGEVLRRYLDL-KNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
+ +++ E L + D+ K S D + + + L + LGRL +H+ ++
Sbjct: 326 QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG 385
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG----AFRIA 131
+G +LI +YS+ G ++ A VF+ I NK + + ++I GG ++G AF +
Sbjct: 386 KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMI------GGLAIHGLGESAFDML 439
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEG-------RAIHGYAIRRGFGVCDEIFETT 184
++ L P+ +T V +L+A + G ++EG R H R C
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC------- 492
Query: 185 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 234
++D+ + G +++A + +M V W + A H+ + E EL
Sbjct: 493 MVDILSRSGSIELAKNLIEEMPVEPNDV-IWRTFLTACSHH-KEFETGEL 540
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/577 (30%), Positives = 289/577 (50%), Gaps = 31/577 (5%)
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE-IFETTLLDMYHKC 192
+Q Q+ Y +L A A+ +L +G +H + + + I L++MY KC
Sbjct: 56 LQSQQAY------AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKC 109
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
G + A VF M V SW LI Y+ G E F LF M+ P+ TL++
Sbjct: 110 GNILYARQVFDTM--PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSS 166
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD----VTKARKMFERLR 308
+ SC GK +HG +++G+ + A++ +Y + +A +FE ++
Sbjct: 167 VLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK 222
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV---SDLRDIRL 365
K+ V +N M+ + +L +AI VF M V + A LN+ S++ SDL +
Sbjct: 223 FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 366 AR---SIHGYVLRHQYITRVEIANQIIHTYAKC--GYLQYARLVFNRMRSRDLVSWTSMI 420
++ +H ++ +T+ E+A +I Y++ Y +L RD+V+W +I
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGII 342
Query: 421 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 480
T + + + AI LF L++E L D T S+L+A + L +H +
Sbjct: 343 TAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFL 401
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
+ +NNSLI YAKCG L++ +F M R + SWN+ML AY++HG +L +F M
Sbjct: 402 ADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
+I PD TF ++L+ACSH+G VEEGL+IFRSM + +P HY C+ID+LSRA +
Sbjct: 462 ---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAER 518
Query: 601 LTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL-EPRNSSSYVLISN 659
EA ++K MP + LL +CR +G+T +G+ A ++ +L EP NS SY+ +SN
Sbjct: 519 FAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSN 578
Query: 660 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
I G ++E + ++ P S E+ +
Sbjct: 579 IYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNK 615
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 229/485 (47%), Gaps = 40/485 (8%)
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
LI +Y++ G + A +VFD + +++V++T++IT Y +G F + S+M +
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE--QEGFCLFSSMLSH-CF 158
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
PN TL S+L + + G+ +HG A++ G C ++ MY +C A
Sbjct: 159 PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLH-CSIYVANAVISMYGRCHDGAAAYE 213
Query: 201 VFGKMNATS-TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
+ A + +WN +IAA+ +A +F +M V D TL N S +
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 260 LDYLCHGK------SIHGYMIRMGVEPDMVACTALVDLYSKF--DVTKARKMFERLRN-K 310
L + +H ++ G+ TAL+ +YS+ D T K+F + + +
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
D V +N ++T + D P AI++F ++ + +SP+ F +++ A + L R A SIH
Sbjct: 334 DIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
V++ ++ + N +IH YAKCG L VF+ M SRD+VSW SM+ Y HG +D
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE----LSVN 486
+ +F Q+ ++ DS T I+LL A S G V+E + F E L+
Sbjct: 453 SILPVF---QKMDINPDSATFIALLSACSHAG---RVEEGLRIFRSMFEKPETLPQLNHY 506
Query: 487 NSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
+I ++ + A + +QM + W A+LG+ HGN +LG +
Sbjct: 507 ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN----------TRLGKL 556
Query: 546 KPDEL 550
D+L
Sbjct: 557 AADKL 561
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 183/411 (44%), Gaps = 39/411 (9%)
Query: 40 CSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED------ 93
C L S + R E GK+VH ++KL L+ +V +++I S YG+ D
Sbjct: 157 CFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVI---SMYGRCHDGAAAYE 213
Query: 94 AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG--AFRIASTMQDQRLYPNRVTLVSLLH 151
A VF+ I K+LV + S+I A+ C G A + M + +R TL+++
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQ----CCNLGKKAIGVFMRMHSDGVGFDRATLLNICS 269
Query: 152 AAAKLGSLQEGRA------IHGYAIRRGFGVCDEIFETTLLDMYHK-CGGVKMAAAVFGK 204
+ K L +H ++ G E+ T L+ +Y + +F +
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEV-ATALIKVYSEMLEDYTDCYKLFME 328
Query: 205 MNATSTTVGSWNPLIAAY-LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 263
M+ V +WN +I A+ +++ + A LF Q+ K+ PD T ++ + +CA L
Sbjct: 329 MSHCRDIV-AWNGIITAFAVYDPE--RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 264 CHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGY 322
H SIH +I+ G D V +L+ Y+K + ++F+ + ++D V +N M+ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL----RDIRLARSIHGYVLRHQY 378
+ + VF KM ++P+ A F+ L+SA S +R+ RS+ + +
Sbjct: 446 SLHGQVDSILPVFQ---KMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFE---KPET 499
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGH 428
+ ++ +I ++ A V +M D V W +++ HG+
Sbjct: 500 LPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
L+ K S D + LK+C L +H IK +D + +SLI Y++ G
Sbjct: 360 LRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGS 419
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
L+ RVFD++ ++D+V++ S++ AY+ G I Q + P+ T ++LL
Sbjct: 420 LDLCMRVFDDMDSRDVVSWNSMLKAYSLHG-----QVDSILPVFQKMDINPDSATFIALL 474
Query: 151 HAAAKLGSLQEGRAI 165
A + G ++EG I
Sbjct: 475 SACSHAGRVEEGLRI 489
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 268/518 (51%), Gaps = 41/518 (7%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
+N ++ + + LF ++ + + PD TL + S L + G+ +HGY +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 275 RMGVEPDMVACTALVDLYS---KFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 331
+ G+E D +L+ +Y+ K ++T K+F+ + +D V +N +++ Y+ N +A
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEIT--HKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 332 INVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
I VF M + S + + ++ +SA S L+++ + I+ +V+ ++ V I N ++
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVD 190
Query: 391 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-------------- 436
+ KCG L AR VF+ MR +++ WTSM+ GYV G IDEA +LF
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAM 250
Query: 437 -----------------RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 479
R +Q +R D+ L+SLL +Q G L K +H
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRV 310
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
+ V +L+ YAKCG + A +F ++ ER SW +++ AM+G L L+
Sbjct: 311 TVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYE 370
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M+ ++ D +TF ++LTAC+H G V EG +IF SM + + P H +C+IDLL RAG
Sbjct: 371 MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAG 430
Query: 600 QLTEAYNLVKSMPSTHSSAAL---CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 656
L EA L+ M + C+LLSA R YG+ +I E +A+++ K+E +SS++ L
Sbjct: 431 LLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
++++ A RW++V ++R KD ++ PG S IE+D
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEID 528
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 200/425 (47%), Gaps = 36/425 (8%)
Query: 19 RHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVG 78
+ + +VL + +L+ D + + LKS L ++ G++VH ++K L D +V
Sbjct: 25 KSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVS 84
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG-SCVYGAFRIASTMQDQ 137
+SL+ +Y+ GK+E H+VFDE+ +D+V++ +I++Y +G G F+ S Q+
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS--QES 142
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 197
L + T+VS L A + L +L+ G I+ + + F + I L+DM+ KCG +
Sbjct: 143 NLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI-GNALVDMFCKCGCLDK 200
Query: 198 AAAVFGKMNA------TSTTVGS-----------------------WNPLIAAYLHNGQA 228
A AVF M TS G W ++ Y+ +
Sbjct: 201 ARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRF 260
Query: 229 LEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 288
EA ELFR M + PD L + + CA+ L GK IHGY+ V D V TAL
Sbjct: 261 DEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTAL 320
Query: 289 VDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
VD+Y+K + A ++F ++ +D + ++ G N + A+++++EM + V +
Sbjct: 321 VDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 348 ALFLNLISAVSDLRDIRLARSI-HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 406
F+ +++A + + R I H RH + E + +I + G L A + +
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 407 RMRSR 411
+MR
Sbjct: 441 KMRGE 445
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 34/330 (10%)
Query: 307 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 366
L+ ++YN M+ + + +F E+ + P+ ++ ++ LR +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 367 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
+HGY ++ ++N ++ YA G ++ VF+ M RD+VSW +I+ YV +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 427 GHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
G ++AI +F R+ Q NL+ D T++S L A S L L + ++ F + +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFE-MSVRI 184
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTE---RCLTS-------------------------- 516
N+L+ + KCG L+ AR +F M + +C TS
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 517 --WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 574
W AM+ Y + E L+LF M+ I+PD S+LT C+ +G +E+G I
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI-HG 303
Query: 575 MIREYTIVPGEVHYNCIIDLLSRAGQLTEA 604
I E + +V ++D+ ++ G + A
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETA 333
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
+++ L+ + M+ + + LF L+ + L D+ TL +L+++ +L +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 468 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 527
++VH +A + V+NSL+ YA GK+ + +F +M +R + SWN ++ +Y +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 528 GNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY--TIVPG 584
G + + + +F M + N+K DE T S L+ACS +E G +I+R ++ E+ ++ G
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 585 EVHYNCIIDLLSRAGQLTEAYNLVKSM 611
N ++D+ + G L +A + SM
Sbjct: 186 ----NALVDMFCKCGCLDKARAVFDSM 208
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/575 (29%), Positives = 296/575 (51%), Gaps = 19/575 (3%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
AF M + + + L A +L SL GR +H +R G + + +L
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCVL 125
Query: 187 DMYHKCGGVKMAAAVFGKM---NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
MY +C ++ A +F +M NA S T +I+AY G +A LF M+
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTT-----MISAYAEQGILDKAVGLFSGMLASGD 180
Query: 244 LPD---LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTK 299
P TL ++++ LD+ G+ IH ++IR G+ + T +V++Y K +
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDF---GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVG 237
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
A+++F+++ K V +M GY + +A+ +F +++ V + +F ++ A +
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
L ++ L + IH V + + V + ++ Y KC + A F +R + VSW+++
Sbjct: 298 LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 357
Query: 420 ITGYVHHGHIDEAIILFRLLQRENLRI-DSVTLISLLQALSQLGCLSAVKEVHC-LTYRA 477
I+GY +EA+ F+ L+ +N I +S T S+ QA S L + +VH R+
Sbjct: 358 ISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 417
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 537
G + ++LIT Y+KCG L+ A +F+ M + +W A + +A +GN +E L+LF
Sbjct: 418 LIGSQYG-ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 538 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 597
M +KP+ +TF ++LTACSH+GLVE+G +M+R+Y + P HY+C+ID+ +R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 598 AGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLI 657
+G L EA +K+MP + + LS C + + E+GE +++ +L+P +++ YVL
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLP 596
Query: 658 SNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
N+ G+W+E A + + ++ LK S I+
Sbjct: 597 FNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQ 631
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 258/547 (47%), Gaps = 25/547 (4%)
Query: 11 NLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN 70
+LV+ + R E ++ + S+ + ++C L L G+ +H D +++
Sbjct: 54 HLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMG 112
Query: 71 L-NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFR 129
+ N + + ++++Y E LEDA ++FDE++ + V+ T++I+AYA G + A
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQG--ILDKAVG 170
Query: 130 IASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMY 189
+ S M P +LL + +L GR IH + IR G + ET +++MY
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL-CSNTSIETGIVNMY 229
Query: 190 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
KCG + A VF +M + L+ Y G+A +A +LF ++ V D
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACT--GLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR 308
+ + +CA L+ L GK IH + ++G+E ++ T LVD Y K A + F+ +R
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP-NVALFLNLISAVSDLRDIRLAR 367
+ V ++ +++GY + EA+ F + + S N + ++ A S L D +
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
+H ++ I + +I Y+KCG L A VF M + D+V+WT+ I+G+ ++G
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT--YRAFH-GKELS 484
+ EA+ LF + ++ +SVT I++L A S G + K HCL R ++ +
Sbjct: 468 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK--HCLDTMLRKYNVAPTID 525
Query: 485 VNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
+ +I YA+ G L+ A + M E SW L H N ++LG
Sbjct: 526 HYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKN----------LELG 575
Query: 544 NIKPDEL 550
I +EL
Sbjct: 576 EIAGEEL 582
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 18/330 (5%)
Query: 1 MNMKHP-SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFG 59
M +K P + TG +V + + L+ ++DL D ++ LK+C +L L G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
K++H KL L S+ VG+ L+ Y + E A R F EI + V++++II+ Y
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY--- 361
Query: 120 GGSCVYGAFRIA-STMQDQRLYP----NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF 174
C F A T + R N T S+ A + L G +H AI+R
Sbjct: 362 ---CQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 175 GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 234
+ + E+ L+ MY KCG + A VF M+ + + +W I+ + + G A EA L
Sbjct: 419 -IGSQYGESALITMYSKCGCLDDANEVFESMD--NPDIVAWTAFISGHAYYGNASEALRL 475
Query: 235 FRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYS 293
F +M+ + P+ +T + +C+ + GK M+R V P + ++D+Y+
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 294 KFD-VTKARKMFERLR-NKDAVIYNVMMTG 321
+ + +A K + + DA+ + ++G
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 426 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
H ++EA + + + + + S + L +A +L LS + +H + +
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
N ++ Y +C L A LF +M+E S M+ AYA G + + LF+ M
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 546 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 605
KP +T++L + + ++ G QI +IR + I+++ + G L A
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG-IVNMYVKCGWLVGAK 239
Query: 606 NLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 665
+ M A CT L + G T+ G A+ LK L +++ EG
Sbjct: 240 RVFDQMAVKKPVA--CTGL----MVGYTQAGR--ARDALK----------LFVDLVTEGV 281
Query: 666 RWD 668
WD
Sbjct: 282 EWD 284
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 247/461 (53%), Gaps = 33/461 (7%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
K I+ +I G+ T +VD K D+ A ++F ++ N + +YN ++ Y N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 326 DLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGY------------ 372
L + I ++ ++++ S P+ F + + + L L + +HG+
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 373 -------------------VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
V Y V N ++ YA+ G ++ A+ +F+ M + +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
VSWT+MI+GY G EA+ FR +Q + D ++LIS+L + +QLG L K +H
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
R K+ V N+LI Y+KCG ++ A LF QM + + SW+ M+ YA HGN
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
++ FN M+ +KP+ +TF +L+ACSH G+ +EGL+ F M ++Y I P HY C+ID
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 594 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 653
+L+RAG+L A + K+MP S +LLS+CR G+ ++ +++LEP + +
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 654 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
YVL++NI A+ G+W++V+ +R M +++ +K TPG SLIE++
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVN 487
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 217/481 (45%), Gaps = 57/481 (11%)
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
T ++D K + A +F ++ ++ V +N +I AY HN + +++Q++ +
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQV--SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKS 103
Query: 243 V-LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKA 300
LPD T SCA L GK +HG++ + G +V AL+D+Y KFD + A
Sbjct: 104 FELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDA 163
Query: 301 RKMFERLRNKDAVIYN-------------------------------VMMTGYLKNDLPV 329
K+F+ + +D + +N M++GY V
Sbjct: 164 HKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYV 223
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 389
EA++ F EM + P+ ++++ + + L + L + IH Y R ++ + + N +I
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 390 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 449
Y+KCG + A +F +M +D++SW++MI+GY +HG+ AI F +QR ++ + +
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 450 TLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKCGKLNMARYLFQQ 508
T + LL A S +G + + + ++ LI A+ GKL A + +
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 509 MTERCLTS-WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE- 566
M + + W ++L + GN L +H L ++P+++ +L A ++ L +
Sbjct: 404 MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDH--LVELEPEDMG-NYVLLANIYADLGKW 460
Query: 567 EGLQIFRSMIREYTI--VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
E + R MIR + PG G L E N+V+ S +S T +
Sbjct: 461 EDVSRLRKMIRNENMKKTPG--------------GSLIEVNNIVQEFVSGDNSKPFWTEI 506
Query: 625 S 625
S
Sbjct: 507 S 507
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 192/415 (46%), Gaps = 50/415 (12%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
K+++ I L+ F+ + ++ + ++ A R+F++++N ++ Y SII AY H+
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 120 GGSCVYGAFRIASTMQDQRL-YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG----- 173
C RI + + P+R T + + A LGS G+ +HG+ + G
Sbjct: 87 SLYC--DVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 144
Query: 174 -------------------FGVCDEIFE------TTLLDMYHKCGGVKMAAAVFGKMNAT 208
V DE++E +LL Y + G +K A +F M
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM--L 202
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
T+ SW +I+ Y G +EA + FR+M + PD ++L + + SCA+L L GK
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKW 262
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDL 327
IH Y R G C AL+++YSK V ++A ++F ++ KD + ++ M++GY +
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 328 PVEAINVFHEMIKMSVSPNVALFLNLISAVS-------DLRDIRLARSIHGYVLRHQYIT 380
AI F+EM + V PN FL L+SA S LR + R +Q
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ------DYQIEP 376
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAII 434
++E +I A+ G L+ A + M + D W S+++ G++D A++
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALV 431
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 147/309 (47%), Gaps = 42/309 (13%)
Query: 21 YGEVLRRYLDLKNSKFSL-DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
Y +V+R Y L F L D KSC +LG GK+VH K +
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN 148
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA---------------------- 117
+LI +Y ++ L DAH+VFDE+ +D++++ S+++ YA
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVS 208
Query: 118 -------HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAI 170
++G C A MQ + P+ ++L+S+L + A+LGSL+ G+ IH YA
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAE 268
Query: 171 RRGF----GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
RRGF GVC+ L++MY KCG + A +FG+M V SW+ +I+ Y ++G
Sbjct: 269 RRGFLKQTGVCN-----ALIEMYSKCGVISQAIQLFGQMEGKD--VISWSTMISGYAYHG 321
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVAC 285
A A E F +M KV P+ +T + +C+ + G M + +EP +
Sbjct: 322 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY 381
Query: 286 TALVDLYSK 294
L+D+ ++
Sbjct: 382 GCLIDVLAR 390
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 259/488 (53%), Gaps = 11/488 (2%)
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 275
N LI + G+ +A + Q + P T IL C L +H +++
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 276 MGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 334
G + D T L+ +YS V ARK+F++ R + ++N + E + +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 335 FHEMIKMSVSPNVALFLNLISAV----SDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
+ +M ++ V + + ++ A + + + IH ++ R Y + V I ++
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 391 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE--NLRIDS 448
YA+ G + YA VF M R++VSW++MI Y +G EA+ FR + RE + +S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 449 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 508
VT++S+LQA + L L K +H R L V ++L+T Y +CGKL + + +F +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 509 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEG 568
M +R + SWN+++ +Y +HG + +++F M P +TF S+L ACSH GLVEEG
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 569 LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACR 628
++F +M R++ I P HY C++DLL RA +L EA +V+ M + +LL +CR
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 629 LYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGY 688
++G+ E+ E ++++ LEP+N+ +YVL+++I AE WDEV ++ + + + L+ PG
Sbjct: 466 IHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGR 525
Query: 689 SLIELDKQ 696
+E+ ++
Sbjct: 526 CWMEVRRK 533
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 190/382 (49%), Gaps = 16/382 (4%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG 120
RVH + + D F+ + LI +YS+ G ++ A +VFD+ + + + ++ A +G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 121 -GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAA----KLGSLQEGRAIHGYAIRRGFG 175
G V G + M + +R T +L A + L +G+ IH + RRG+
Sbjct: 158 HGEEVLGLY---WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214
Query: 176 VCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF 235
I TTL+DMY + G V A+ VFG M + V SW+ +IA Y NG+A EA F
Sbjct: 215 SHVYIM-TTLVDMYARFGCVDYASYVFGGMPVRN--VVSWSAMIACYAKNGKAFEALRTF 271
Query: 236 RQMIH--RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS 293
R+M+ + P+ +T+ + + +CA L L GK IHGY++R G++ + +ALV +Y
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 294 KF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
+ + +++F+R+ ++D V +N +++ Y + +AI +F EM+ SP F++
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 353 LISAVSDLRDIRLARSIHGYVLR-HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
++ A S + + + + R H ++E ++ + L A + MR+
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 412 DLVS-WTSMITGYVHHGHIDEA 432
W S++ HG+++ A
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELA 473
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 158/303 (52%), Gaps = 17/303 (5%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVA----LGRLEFGKRVHVDSIKLNLNSDC 75
H EVL Y + D T LK+CVA + L GK +H + +S
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM- 134
++ ++L+ +Y+ +G ++ A VF + +++V+++++I YA +G + + A R M
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKA--FEALRTFREMM 275
Query: 135 -QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE--TTLLDMYHK 191
+ + PN VT+VS+L A A L +L++G+ IHGY +RRG D I + L+ MY +
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL---DSILPVISALVTMYGR 332
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
CG +++ VF +M+ V SWN LI++Y +G +A ++F +M+ P +T
Sbjct: 333 CGKLEVGQRVFDRMH--DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 252 NAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN 309
+ + +C+ + GK + M R G++P + +VDL + + + +A KM + +R
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 310 KDA 312
+
Sbjct: 451 EPG 453
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 227/403 (56%), Gaps = 3/403 (0%)
Query: 300 ARKMFERLRNKDAV---IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
ARK+F+ + + + ++ M GY +N P +A+ V+ +M+ + P + A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 357 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 416
DL+D+R+ R IH +++ + + N ++ Y + G AR VF+ M R++V+W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 417 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 476
S+I+ + E LFR +Q E + TL ++L A S++ L KE+H +
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 477 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 536
+ ++ + NSL+ Y KCG++ +R +F M + L SWN ML YA++GN EV+ L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F M + PD +TF ++L+ CS +GL E GL +F M E+ + P HY C++D+L
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 656
RAG++ EA ++++MP S++ +LL++CRL+G+ +GE AK++ LEP N +YV+
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVM 545
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
+SNI A+ WD V IR M K + +K G S +++ + ++
Sbjct: 546 VSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQI 588
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 26/402 (6%)
Query: 42 AITLCLKSCVALGRLEFGKRVHVDSIKLN---LNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
A T L +C++ L G + + S+ LN L + + S LI L+S +L+ A ++F
Sbjct: 133 AYTDLLHACISAKSLHHG--IKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIF 190
Query: 99 DEITNKDLVA---YTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAK 155
D++T+ L+ + ++ Y+ +G A + M + P ++ L A
Sbjct: 191 DDVTDSSLLTEKVWAAMAIGYSRNGSP--RDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 156 LGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSW 215
L L+ GR IH ++R V D++ LL +Y + G A VF M + V +W
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKV-DQVVYNVLLKLYMESGLFDDARKVFDGM--SERNVVTW 305
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 275
N LI+ + E F LFR+M + TL + +C+ + L GK IH +++
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 276 MGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 334
+PD+ +L+D+Y K +V +R++F+ + KD +N+M+ Y N E IN+
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 335 FHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH---- 390
F MI+ V+P+ F+ L+S SD + +G L + T ++ + H
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSD-----TGLTEYGLSLFERMKTEFRVSPALEHYACL 480
Query: 391 --TYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHI 429
+ G ++ A V M + S W S++ HG++
Sbjct: 481 VDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNV 522
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
Y+D+ S +I++ LK+CV L L G+ +H +K D V + L++LY E
Sbjct: 224 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
G +DA +VFD ++ +++V + S+I+ S V+ F + MQ++ + + TL
Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVL--SKKVRVHEMFNLFRKMQEEMIGFSWATLT 341
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
++L A +++ +L G+ IH I + D +L+DMY KCG V+ + VF M
Sbjct: 342 TILPACSRVAALLTGKEIHA-QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-- 398
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
+ + SWN ++ Y NG E LF MI V PD +T + C++ +G
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 268 SIHGYM-IRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 312
S+ M V P + LVD+ + + +A K+ E + K +
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPS 505
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E+ + ++ + +T L +C + L GK +H +K D + +SL+
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
+Y + G++E + RVFD + KDL ++ ++ YA +G + + M + + P+
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGN--IEEVINLFEWMIESGVAPD 437
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAV 201
+T V+LL + G + G ++ ++ F V + L+D+ + G +K A V
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLF-ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKV 496
Query: 202 FGKM 205
M
Sbjct: 497 IETM 500
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 258/520 (49%), Gaps = 36/520 (6%)
Query: 177 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
C+ L+ Y V A VF ++ + + N +I +Y++NG E ++F
Sbjct: 72 CNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII--INVMIRSYVNNGFYGEGVKVFG 129
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 296
M V PD T + +C+ + G+ IHG ++G+ + LV +Y K
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189
Query: 297 -VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
+++AR + + + +D V +N ++ GY +N +A+ V EM + +S + +L+
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
AVS+ T E + Y + +F +M + LVS
Sbjct: 250 AVSN--------------------TTTE-------------NVMYVKDMFFKMGKKSLVS 276
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
W MI Y+ + EA+ L+ ++ + D+V++ S+L A LS K++H
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 535
R L + N+LI YAKCG L AR +F+ M R + SW AM+ AY G + +
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 595
LF+ ++ + PD + F + L ACSH+GL+EEG F+ M Y I P H C++DLL
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 596 SRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYV 655
RAG++ EAY ++ M + LL ACR++ DT+IG A ++ +L P S YV
Sbjct: 457 GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYV 516
Query: 656 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDK 695
L+SNI A+ GRW+EV +IR + K K LK PG S +E+++
Sbjct: 517 LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 233/504 (46%), Gaps = 49/504 (9%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
+ VH I +L + +G L+R Y+ + A +VFDEI ++++ +I +Y ++
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 120 GGSCVYG-AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
G YG ++ TM + P+ T +L A + G++ GR IHG A + G+
Sbjct: 119 G---FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK--VGLSS 173
Query: 179 EIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
+F L+ MY KCG + A V +M + V SWN L+ Y N + +A E+ R+
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEM--SRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 238 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV 297
M K+ D T+A+ + P + T +Y K
Sbjct: 232 MESVKISHDAGTMASLL-------------------------PAVSNTTTENVMYVK--- 263
Query: 298 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
MF ++ K V +NVM+ Y+KN +PVEA+ ++ M P+ +++ A
Sbjct: 264 ----DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
D + L + IHGY+ R + I + + N +I YAKCG L+ AR VF M+SRD+VSWT
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
+MI+ Y G +A+ LF LQ L DS+ ++ L A S G L + C
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS--CFKLMT 437
Query: 478 FHGK---ELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEV 533
H K L ++ + GK+ A Q M+ E W A+LGA +H +
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD-- 495
Query: 534 LKLFNHMKLGNIKPDELTFTSILT 557
+ L KL + P++ + +L+
Sbjct: 496 IGLLAADKLFQLAPEQSGYYVLLS 519
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 197/430 (45%), Gaps = 45/430 (10%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
YGE ++ + + D LK+C G + G+++H + K+ L+S FVG+
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
L+ +Y + G L +A V DE++ +D+V++ S++ YA + A + M+ ++
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN--QRFDDALEVCREMESVKIS 238
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
+ T+ SLL A + TT MY K
Sbjct: 239 HDAGTMASLLPAVSN--------------------------TTTENVMYVK--------D 264
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
+F KM S SWN +I Y+ N +EA EL+ +M PD +++ + + +C +
Sbjct: 265 MFFKMGKKSLV--SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMM 319
L GK IHGY+ R + P+++ AL+D+Y+K + KAR +FE ++++D V + M+
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 379
+ Y + +A+ +F ++ + P+ F+ ++A S + RS + H I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 380 T-RVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII--- 434
T R+E ++ + G ++ A R + + + W +++ H D ++
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 435 -LFRLLQREN 443
LF+L ++
Sbjct: 503 KLFQLAPEQS 512
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 15/342 (4%)
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
SP +FL L + DIR R++H ++ + +++ YA + AR
Sbjct: 37 SPQETVFL-LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARK 95
Query: 404 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 463
VF+ + R+++ MI YV++G E + +F + N+R D T +L+A S G
Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
+ +++H + L V N L++ Y KCG L+ AR + +M+ R + SWN+++
Sbjct: 156 IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
YA + + + L++ M+ I D T S+L A S++ E + + M +
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KK 272
Query: 584 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIA 640
V +N +I + + EA L M + + ++ ++L AC GDT ++
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC---GDTS-ALSLG 328
Query: 641 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 682
K+I R LI N+L E D A + K +++
Sbjct: 329 KKIHGYIERKK----LIPNLLLENALIDMYAKCGCLEKARDV 366
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 288/546 (52%), Gaps = 17/546 (3%)
Query: 162 GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 221
G +H ++ G CD + +L+ MY K VF +M T S+ +I +
Sbjct: 66 GAQLHCLCLKAG-ADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTV--SYCSIINS 122
Query: 222 YLHNGQALEAFELFRQMIHRKVLP------DLLTLANAILSCAELDYLCHGKSIHGYMIR 275
+G EA +L ++M +P LL L + S +++ + H ++
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL----VLVD 178
Query: 276 MGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 334
++ ++ TALVD+Y KFD A +F+++ K+ V + M++G + N +++
Sbjct: 179 ERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDL 238
Query: 335 FHEMIKMSVSPNVALFLNLISAVSDLR-DIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
F M + ++ PN L+++ A +L L + IHG+ RH + + Y
Sbjct: 239 FRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 394 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 453
+CG + +R++F + RD+V W+SMI+GY G E + L +++E + +SVTL++
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
++ A + LS VH + + + N+LI YAKCG L+ AR +F ++TE+
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
L SW++M+ AY +HG+ +E L++F M G + D++ F +IL+AC+H+GLVEE IF
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 633
+ + V E HY C I+LL R G++ +A+ + +MP S+ +LLSAC +G
Sbjct: 479 QAGKYHMPVTLE-HYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 634 EI-GEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
++ G+ IA +++K EP N ++YVL+S I E G + +R + + ++L G+S IE
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Query: 693 LDKQRE 698
+ Q E
Sbjct: 598 PELQIE 603
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 245/519 (47%), Gaps = 16/519 (3%)
Query: 19 RHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCV---ALGRLEF--GKRVHVDSIKLNLNS 73
+ Y E LR Y K SL + T L S + A + F G ++H +K +
Sbjct: 24 QFYDEALRLY---KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADC 80
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
D V +SLI +Y+++ + +VFDE+ ++D V+Y SII + G +Y A ++
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG--LLYEAMKLIKE 138
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQE-GRAIHGYAIRRGFGVCDEIFETTLLDMYHKC 192
M P + SLL ++GS + R H + + T L+DMY K
Sbjct: 139 MYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKF 198
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
A VF +M + SW +I+ + N +LFR M + P+ +TL +
Sbjct: 199 DDHAAAFHVFDQMEVKNEV--SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 253 AILSCAELDYLCH-GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 310
+ +C EL+Y K IHG+ R G D A + +Y + +V+ +R +FE + +
Sbjct: 257 VLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
D V+++ M++GY + E +N+ ++M K + N L ++SA ++ + A ++H
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
+L+ +++ + + N +I YAKCG L AR VF + +DLVSW+SMI Y HGH
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGS 436
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 490
EA+ +F+ + + +D + +++L A + G + + + + L I
Sbjct: 437 EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYI 496
Query: 491 TTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHG 528
+ GK++ A + M + W+++L A HG
Sbjct: 497 NLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 277/525 (52%), Gaps = 13/525 (2%)
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
++ Y K + +A +F ++ T S+N LI+ Y + A LF++M
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTV--SYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 243 VLPDLLTLANAILSCAE-LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-A 300
D TL+ I +C + +D + K +H + + G + A V YSK + + A
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 301 RKMFERLRN-KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
+F + +D V +N M+ Y ++ +A+ ++ EMI ++ ++++A++
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY---LQYARLVFNRMRSRDLVSW 416
L + R HG +++ + + + +I Y+KCG + + VF + S DLV W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 417 TSMITGYVHHGHI-DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
+MI+GY + + +EA+ FR +QR R D + + + A S L S K++H L
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAI 372
Query: 476 RA-FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 534
++ +SVNN+LI+ Y K G L AR++F +M E S+N M+ YA HG+ E L
Sbjct: 373 KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEAL 432
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
L+ M I P+++TF ++L+AC+H G V+EG + F +M + I P HY+C+IDL
Sbjct: 433 LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDL 492
Query: 595 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 654
L RAG+L EA + +MP S A LL ACR + + + E A +++ ++P ++ Y
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPY 552
Query: 655 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
V+++N+ A+ +W+E+A +R + K ++ PG S IE+ K++ V
Sbjct: 553 VMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHV 597
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 247/526 (46%), Gaps = 46/526 (8%)
Query: 45 LCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKL------------- 91
L LKS VA L GK +H +K + S ++ + + LYS+ G+L
Sbjct: 14 LLLKS-VAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEP 72
Query: 92 -------------ED-----AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
+D A ++FDEI D V+Y ++I+ YA + + + A +
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARET--FAAMVLFKR 130
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
M+ + TL L+ A L + +H +++ GF + + Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSV-NNAFVTYYSKGG 187
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
++ A +VF M+ V SWN +I AY + + +A L+++MI + D+ TLA+
Sbjct: 188 LLREAVSVFYGMDELRDEV-SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF----DVTKARKMFERLRN 309
+ + LD+L G+ HG +I+ G + + L+D YSK + + K+F+ + +
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 310 KDAVIYNVMMTGYLKN-DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 368
D V++N M++GY N +L EA+ F +M ++ P+ F+ + SA S+L +
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 369 IHGYVLR-HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
IHG ++ H R+ + N +I Y K G LQ AR VF+RM + VS+ MI GY HG
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVN 486
H EA++L++ + + + +T +++L A + G + +E F E
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLT-SWNAMLGAYAMHGNYA 531
+ +I + GKL A M + + +W A+LGA H N A
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMA 532
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 143/310 (46%), Gaps = 16/310 (5%)
Query: 12 LVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNL 71
+VA + + + L Y ++ F +D + L + +L L G++ H IK
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 72 NSDCFVGSSLIRLYSEYGKLE---DAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAF 128
+ + VGS LI YS+ G + D+ +VF EI + DLV + ++I+ Y+ +
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEE---LSEE 328
Query: 129 RIASTMQDQRL--YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
+ S Q QR+ P+ + V + A + L S + + IHG AI+ L+
Sbjct: 329 AVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALI 388
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD 246
+Y+K G ++ A VF +M + S+N +I Y +G EA L+++M+ + P+
Sbjct: 389 SLYYKSGNLQDARWVFDRMPELNAV--SFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 247 LLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFDVTKARKMFE 305
+T + +CA + G+ M +EP+ + ++DL + +A K+ E
Sbjct: 447 KITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDL-----LGRAGKLEE 501
Query: 306 RLRNKDAVIY 315
R DA+ Y
Sbjct: 502 AERFIDAMPY 511
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 237/418 (56%), Gaps = 12/418 (2%)
Query: 279 EPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
EPD + ++ Y + + KA+ F+R+ KDA +N M+TGY + +A +F+
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 338 MI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 396
M+ K VS N +IS + D+ A + + + V +I Y K
Sbjct: 181 MMEKNEVSWNA-----MISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAK 231
Query: 397 YLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 455
++ A +F M +++LV+W +MI+GYV + ++ + LFR + E +R +S L S L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 456 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT 515
S+L L +++H + ++ +++ SLI+ Y KCG+L A LF+ M ++ +
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 516 SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 575
+WNAM+ YA HGN + L LF M I+PD +TF ++L AC+H+GLV G+ F SM
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 576 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEI 635
+R+Y + P HY C++DLL RAG+L EA L++SMP +A TLL ACR++ + E+
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVEL 471
Query: 636 GEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
E A+++L+L +N++ YV ++NI A RW++VA +R K+ + PGYS IE+
Sbjct: 472 AEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEI 529
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 143/285 (50%), Gaps = 13/285 (4%)
Query: 73 SDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAS 132
D F + ++ Y E A FD + KD ++ ++IT YA G + A +
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGE--MEKARELFY 179
Query: 133 TMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC 192
+M ++ N V+ +++ + G L++ A RG + T ++ Y K
Sbjct: 180 SMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGV-----VAWTAMITGYMKA 230
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
V++A A+F M V +WN +I+ Y+ N + + +LFR M+ + P+ L++
Sbjct: 231 KKVELAEAMFKDMTVNKNLV-TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 311
A+L C+EL L G+ IH + + + D+ A T+L+ +Y K ++ A K+FE ++ KD
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
V +N M++GY ++ +A+ +F EMI + P+ F+ ++ A
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 9/219 (4%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEIT-NKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQ 137
+++I Y + K+E A +F ++T NK+LV + ++I+ Y + S ++ M ++
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN--SRPEDGLKLFRAMLEE 278
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVK 196
+ PN L S L ++L +LQ GR IH I +C+++ T+L+ MY KCG +
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIH--QIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A +F M V +WN +I+ Y +G A +A LFR+MI K+ PD +T +L+
Sbjct: 337 DAWKLFEVMKKKD--VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
Query: 257 CAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 294
C + G + M+R VEP T +VDL +
Sbjct: 395 CNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
+ S ++ L C L L+ G+++H K L +D +SLI +Y + G+L DA ++F
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
+ + KD+VA+ ++I+ YA G + A + M D ++ P+ +T V++L A G
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNA--DKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA------------AAVFGKM 205
+ G A +R T ++D+ + G ++ A AAVFG +
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 159/412 (38%), Gaps = 116/412 (28%)
Query: 373 VLRHQYITRVEIANQII---HTYAKC---GYLQYARLVFNRMRSRDLVSWTSMITG---- 422
++R Y+T+ +QI A+C G + A VF+ MR+++ ++W S++ G
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 423 ----------------------------YVHHGHIDEAIILFRLLQRENLRIDSVTLISL 454
YV + + ++A F + + D+ + ++
Sbjct: 106 PSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTM 161
Query: 455 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVN---------------------------- 486
+ ++ G + +E L Y E+S N
Sbjct: 162 ITGYARRGEMEKARE---LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV 218
Query: 487 --NSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
++IT Y K K+ +A +F+ MT + L +WNAM+ Y + + LKLF M
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
I+P+ +S L CS ++ G QI + ++ + T+ +I + + G+L +
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 604 AYNLVKSMP--------------STHSSA--ALC------------------TLLSACRL 629
A+ L + M + H +A ALC +L AC
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397
Query: 630 YGDTEIGEAIAKQIL---KLEPRNSSSYVLISNILAEGGRWDEVAH-IRAMT 677
G IG A + ++ K+EP+ Y + ++L G+ +E IR+M
Sbjct: 398 AGLVNIGMAYFESMVRDYKVEPQ-PDHYTCMVDLLGRAGKLEEALKLIRSMP 448
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 258/480 (53%), Gaps = 42/480 (8%)
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY---SKFD-----VTKARKMFERL 307
SC+ L K IHG+++R + D+ + L+ L S F+ + A +F ++
Sbjct: 21 SCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
+N + ++N+++ + P +A + +M+K + P+ F LI A S++ + +
Sbjct: 78 QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGE 137
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
H ++R + V + N ++H YA CG++ A +F +M RD+VSWTSM+ GY G
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 428 HID-------------------------------EAIILFRLLQRENLRIDSVTLISLLQ 456
++ +AI LF ++RE + + ++S++
Sbjct: 198 MVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVIS 257
Query: 457 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS 516
+ + LG L + + ++ L + +L+ + +CG + A ++F+ + E S
Sbjct: 258 SCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 576
W++++ A+HG+ + + F+ M P ++TFT++L+ACSH GLVE+GL+I+ +M
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 577 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIG 636
+++ I P HY CI+D+L RAG+L EA N + M ++ L LL AC++Y +TE+
Sbjct: 378 KDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVA 437
Query: 637 EAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
E + ++K++P +S YVL+SNI A G+WD++ +R M K+K +K PG+SLIE+D +
Sbjct: 438 ERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGK 497
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 184/416 (44%), Gaps = 40/416 (9%)
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 257
A +F ++ + V +N LI + + +AF + QM+ ++ PD +T I +
Sbjct: 70 AYGIFSQIQNPNLFV--FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 258 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD--------------------- 296
+E++ + G+ H ++R G + D+ +LV +Y+
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 297 -----------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 345
V AR+MF+ + +++ +++M+ GY KN+ +AI++F M + V
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 346 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 405
N + +++IS+ + L + + YV++ + + ++ + +CG ++ A VF
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 406 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 465
+ D +SW+S+I G HGH +A+ F + VT ++L A S G +
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 466 AVKEVHCLTYRAFHGKE--LSVNNSLITTYAKCGKLNMAR-YLFQQMTERCLTSWNAMLG 522
E++ + HG E L ++ + GKL A ++ + + A+LG
Sbjct: 368 KGLEIY-ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 578
A ++ N EV + +M L +KP+ + +L+ + ++ R M++E
Sbjct: 427 ACKIYKN-TEVAERVGNM-LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
Y + S+ D +K+ + + G++ H ++ +D +V +SL+ +Y+
Sbjct: 105 YTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYAN 164
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG--------------------------- 120
G + A R+F ++ +D+V++TS++ Y G
Sbjct: 165 CGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGY 224
Query: 121 --GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
+C A + M+ + + N +VS++ + A LG+L+ G + Y ++ V +
Sbjct: 225 AKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTV-N 283
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
I T L+DM+ +CG ++ A VF + T + SW+ +I +G A +A F QM
Sbjct: 284 LILGTALVDMFWRCGDIEKAIHVFEGLPETDSL--SWSSIIKGLAVHGHAHKAMHYFSQM 341
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 294
I +P +T + +C+ + G I+ M + G+EP + +VD+ +
Sbjct: 342 ISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGR 398
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/614 (28%), Positives = 300/614 (48%), Gaps = 76/614 (12%)
Query: 160 QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN-ATSTTVGSWNPL 218
Q+ R +H + F L+ +Y + G + A VF ++ + + WN +
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 278
+ A + +G A EL+R M R + D L + +C L ++ H +I++G+
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 279 EPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
+ ++ L+ LY K + A +F + ++ + +NVM+ G+ + A+ +F
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 338 MIKMSVSPNVALFLNLIS-----------------------AVS------------DLRD 362
M + P+ + +++S AVS +L
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 422
+ +A +HGYV++ + + N +IH Y K G ++ A +F ++R++ + SW S+IT
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITS 369
Query: 423 YVHHGHIDEAIILF---------------------------------------RLLQREN 443
+V G +DEA+ LF R +Q
Sbjct: 370 FVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK 429
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+ +SVT+ +L ++L L+ +E+H R + + V N+L+ YAKCG L+
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
+F+ + ++ L SWN+++ Y MHG + L +F+ M PD + ++L+ACSH+G
Sbjct: 490 LVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
LVE+G +IF SM + + + P + HY CI+DLL R G L EA +VK+MP L L
Sbjct: 550 LVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGAL 609
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
L++CR++ + +I E IA Q+ LEP + SY+L+SNI + GGRW+E A++RA+ K K+LK
Sbjct: 610 LNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLK 669
Query: 684 STPGYSLIELDKQR 697
G S IE+ K++
Sbjct: 670 KVSGSSWIEVKKKK 683
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 184/423 (43%), Gaps = 78/423 (18%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y L Y ++ + D + L L++C LGR + H I++ L + V +
Sbjct: 139 YENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNE 198
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
L+ LY + G++ DA+ +F E+ ++ +++ +I ++ A +I MQ +
Sbjct: 199 LLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD--CESAVKIFEWMQREEFK 256
Query: 141 PNRVTLVSLLHAAAKLGSLQE-----------GRAIHGYAIRRGFGVCDEI--------- 180
P+ VT S+L ++ G ++ G A+ G A+ F VC E+
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 181 --------FE------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
FE L+ +Y K G VK A +F ++ + + SWN LI +++ G
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR--NKGIESWNSLITSFVDAG 374
Query: 227 QALEA---------------------------------------FELFRQMIHRKVLPDL 247
+ EA E FRQM KVL +
Sbjct: 375 KLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANS 434
Query: 248 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFER 306
+T+ + CAEL L G+ IHG++IR + +++ ALV++Y+K +++ +FE
Sbjct: 435 VTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEA 494
Query: 307 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 366
+R+KD + +N ++ GY + +A+++F MI P+ + ++SA S +
Sbjct: 495 IRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKG 554
Query: 367 RSI 369
R I
Sbjct: 555 REI 557
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 41 SAITLC--LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
+++T+C L C L L G+ +H I+ +++ + V ++L+ +Y++ G L + VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
+ I +KDL+++ SII Y G + A + M +P+ + LV++L A + G
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFA--EKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 159 LQEGRAIHGYAIRRGFGV-CDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
+++GR I Y++ + FG+ + ++D+ + G +K A+ + M
Sbjct: 551 VEKGREIF-YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 268/554 (48%), Gaps = 71/554 (12%)
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
T+ S++ LI A ++ +F +M ++PD L N CAEL GK IH
Sbjct: 80 TIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH 139
Query: 271 GYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI--------------- 314
G++ D ++ +Y + + ARK+F+R+ +KD V
Sbjct: 140 CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLE 199
Query: 315 --------------------YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
+N +++G+ ++ EA+ +F ++ + P+ +++
Sbjct: 200 EVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----- 409
+V D + + R IHGYV++ + + + +I Y K G++ +FN+
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAG 319
Query: 410 ---------SRD---------------------LVSWTSMITGYVHHGHIDEAIILFRLL 439
SR+ +VSWTS+I G +G EA+ LFR +
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 499
Q ++ + VT+ S+L A + L + H R + V ++LI YAKCG++
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439
Query: 500 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
N+++ +F M + L WN+++ ++MHG EV+ +F + +KPD ++FTS+L+AC
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
GL +EG + F+ M EY I P HY+C+++LL RAG+L EAY+L+K MP S
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV 559
Query: 620 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 679
LL++CRL + ++ E A+++ LEP N +YVL+SNI A G W EV IR +
Sbjct: 560 WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMES 619
Query: 680 KELKSTPGYSLIEL 693
LK PG S I++
Sbjct: 620 LGLKKNPGCSWIQV 633
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 179/379 (47%), Gaps = 72/379 (18%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
K C L + GK++H S L+ D FV S+ +Y G++ DA +VFD +++KD+
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQD------------------------------ 136
V ++++ AYA G C+ RI S M+
Sbjct: 183 VTCSALLCAYARKG--CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 137 QRLY-----PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
Q+++ P++VT+ S+L + L GR IHGY I++G + D+ + ++DMY K
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL-LKDKCVISAMIDMYGK 299
Query: 192 CGGVKMAAAVF--------GKMNATST-------------------------TVGSWNPL 218
G V ++F G NA T V SW +
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 278
IA NG+ +EA ELFR+M V P+ +T+ + + +C + L HG+S HG+ +R+ +
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 279 EPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
++ +AL+D+Y+K + ++ +F + K+ V +N +M G+ + E +++F
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 338 MIKMSVSPNVALFLNLISA 356
+++ + P+ F +L+SA
Sbjct: 480 LMRTRLKPDFISFTSLLSA 498
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 11 NLVASCRRRHYG-EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKL 69
+++A C + E L + +++ + + I L +C + L G+ H ++++
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 70 NLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFR 129
+L + VGS+LI +Y++ G++ + VF+ + K+LV + S++ ++ G +
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA--KEVMS 475
Query: 130 IASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
I ++ RL P+ ++ SLL A ++G EG
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 168/614 (27%), Positives = 304/614 (49%), Gaps = 64/614 (10%)
Query: 86 SEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVT 145
S GK+ +A ++FD +K + ++ S++ Y + R A + D+ N ++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMP------RDARKLFDEMPDRNIIS 81
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
L+ K G + E R + R + T L+ Y G V +A ++F KM
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMPERNV-----VSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 265
+ SW ++ +L +G+ +A +L+ +++PD +A +
Sbjct: 137 PEKNKV--SWTVMLIGFLQDGRIDDACKLY------EMIPDKDNIARTSM---------- 178
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
IHG L + V +AR++F+ + + + + M+TGY +N
Sbjct: 179 ---IHG-------------------LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISA--VSDLRDIRLARSIHGYVLRHQYITRVE 383
+ +A +F M + + ++ + + + D ++ + V
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL----------FEVMPVKPVI 266
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
N +I + G + AR VF+ M+ R+ SW ++I + +G EA+ LF L+Q++
Sbjct: 267 ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQG 326
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+R TLIS+L + L L K+VH R ++ V + L+T Y KCG+L ++
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL-GNIKPDELTFTSILTACSHS 562
+F + + + WN+++ YA HG E LK+F M L G+ KP+E+TF + L+ACS++
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 563 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 622
G+VEEGL+I+ SM + + P HY C++D+L RAG+ EA ++ SM +A +
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 623 LLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 682
LL ACR + ++ E AK+++++EP NS +Y+L+SN+ A GRW +VA +R + K + +
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLV 566
Query: 683 KSTPGYSLIELDKQ 696
+ +PG S E++ +
Sbjct: 567 RKSPGCSWTEVENK 580
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 238/478 (49%), Gaps = 35/478 (7%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
+ L+ Y + G++++A +VFD + +++V++T+++ Y H+ G +A ++ +
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHN------GKVDVAESLFWKM 136
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
N+V+ +L +G LQ+GR + D I T+++ K G V A
Sbjct: 137 PEKNKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F +M+ S V +W ++ Y N + +A ++F V+P+ ++ +
Sbjct: 192 REIFDEMSERS--VITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVS---WTSM 240
Query: 259 ELDYLCHGK--SIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNKDAVIY 315
+ Y+ +G+ M V+P ++AC A++ L K ++ KAR++F+ ++ ++ +
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDASW 299
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
++ + +N +EA+++F M K V P ++++S + L + + +H ++R
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 435
Q+ V +A+ ++ Y KCG L ++L+F+R S+D++ W S+I+GY HG +EA+ +
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419
Query: 436 F-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS-LITTY 493
F + + + + VT ++ L A S G + +++ F K ++ + + ++
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 494 AKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHG--NYAEVLKLFNHMKLGNIKPD 548
+ G+ N A + MT E W ++LGA H + AE F KL I+P+
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAE----FCAKKLIEIEPE 533
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 143/289 (49%), Gaps = 15/289 (5%)
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
+ D +S+I + G++++A +FDE++ + ++ +T+++T Y + V A +I
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR--VDDARKIF 226
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
M ++ V+ S+L +G +Q GR + V I ++ +
Sbjct: 227 DVMPEK----TEVSWTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQ 277
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
G + A VF M + SW +I + NG LEA +LF M + V P TL
Sbjct: 278 KGEIAKARRVFDSMKERND--ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 252 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 310
+ + CA L L HGK +H ++R + D+ + L+ +Y K ++ K++ +F+R +K
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVS 358
D +++N +++GY + L EA+ VF EM + S PN F+ +SA S
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 122/306 (39%), Gaps = 73/306 (23%)
Query: 373 VLRHQYITRVE--IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM----------- 419
+LR Y T + AN I ++ G + AR +F+ S+ + SW SM
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 420 --------------------ITGYVHHGHIDEAIILFRLLQRENL--------------R 445
++GY+ +G IDEA +F L+ N+ +
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 446 ID-------------SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 492
+D V+ +L Q G + C Y K+ S+I
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA----CKLYEMIPDKDNIARTSMIHG 181
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
K G+++ AR +F +M+ER + +W M+ Y + + K+F+ M + E+++
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSW 237
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
TS+L +G +E+ ++F M + I N +I L + G++ +A + SM
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIA-----CNAMISGLGQKGEIAKARRVFDSMK 292
Query: 613 STHSSA 618
+ ++
Sbjct: 293 ERNDAS 298
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L C +L L GK+VH ++ + D +V S L+ +Y + G+L + +FD +KD+
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQ-DQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
+ + SII+ YA G A ++ M PN VT V+ L A + G ++EG I
Sbjct: 398 IMWNSIISGYASHGLG--EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Query: 166 HGYAIRRGFGVCD-EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 221
+ ++ FGV ++DM + G A + M W L+ A
Sbjct: 456 Y-ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM-TVEPDAAVWGSLLGA 510
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 262/521 (50%), Gaps = 35/521 (6%)
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHR---KVLPDLLTLANAILSCAELDYLCH 265
+ + SWN I + + E+F L++QM+ + PD T CA+L
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 324
G I G+++++ +E A + +++ D+ ARK+F+ +D V +N ++ GY K
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
+AI V+ M V P+ + L+S+ S L D+ + + YV + + +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID-------------- 430
N ++ ++KCG + AR +F+ + R +VSWT+MI+GY G +D
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 431 -----------------EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
+A+ LF+ +Q N + D +T+I L A SQLG L +H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
+ +++ SL+ YAKCG ++ A +F + R ++ A++G A+HG+ +
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
+ FN M I PDE+TF +L+AC H G+++ G F M + + P HY+ ++D
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 594 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 653
LL RAG L EA L++SMP +A LL CR++G+ E+GE AK++L+L+P +S
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 654 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
YVL+ + E W++ R M ++ ++ PG S IE++
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 635
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 191/422 (45%), Gaps = 47/422 (11%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
K C L G + +KL L V ++ I +++ G +E+A +VFDE +DL
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V++ +I Y G + A + M+ + + P+ VT++ L+ + + LG L G+ +
Sbjct: 223 VSWNCLINGYKKIGEA--EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 167 GYAIRRG--------------FGVCDEIFE----------------TTLLDMYHKCGGVK 196
Y G F C +I E TT++ Y +CG +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
++ +F M + WN +I + + +A LF++M PD +T+ + + +
Sbjct: 341 VSRKLFDDMEEKDVVL--WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 315
C++L L G IH Y+ + + ++ T+LVD+Y+K ++++A +F ++ ++++ Y
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 458
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
++ G + AI+ F+EMI ++P+ F+ L+SA I+ R
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS---- 514
Query: 376 HQYITRVEIANQIIH------TYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGH 428
Q +R + Q+ H + G L+ A RL+ + D W +++ G HG+
Sbjct: 515 -QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
Query: 429 ID 430
++
Sbjct: 574 VE 575
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 23/255 (9%)
Query: 397 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL---RIDSVTLIS 453
YL Y+ + + + ++ SW I G+ + E+ +L++ + R R D T
Sbjct: 102 YLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPV 161
Query: 454 LLQALSQLGCLSAVKEV---HCLTYRAFHGKEL--SVNNSLITTYAKCGKLNMARYLFQQ 508
L + + L LS++ + H L R EL V+N+ I +A CG + AR +F +
Sbjct: 162 LFKVCADLR-LSSLGHMILGHVLKLRL----ELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 509 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEG 568
R L SWN ++ Y G + + ++ M+ +KPD++T ++++CS G + G
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 569 LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY----NLVK----SMPSTHSSAAL 620
+ F ++E + N ++D+ S+ G + EA NL K S + S A
Sbjct: 277 KE-FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYAR 335
Query: 621 CTLLSACR-LYGDTE 634
C LL R L+ D E
Sbjct: 336 CGLLDVSRKLFDDME 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 14 ASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNS 73
S + + + L + +++ S D + CL +C LG L+ G +H K +L+
Sbjct: 363 GSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL 422
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
+ +G+SL+ +Y++ G + +A VF I ++ + YT+II A G + A +
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST--AISYFNE 480
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGR 163
M D + P+ +T + LL A G +Q GR
Sbjct: 481 MIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 285/549 (51%), Gaps = 19/549 (3%)
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
+A L L + + HG+ +++G + + +F + LL Y K A +F +M +
Sbjct: 46 SASLDHLSDVKQEHGFMVKQG--IYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRN-- 101
Query: 212 VGSWNPLIAAYLH-----NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
+ +WN LI + N +A F +++ V D ++ I C + + G
Sbjct: 102 IVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAG 161
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 325
+H M++ G+E T+LV Y K + +AR++FE + ++D V++N +++ Y+ N
Sbjct: 162 IQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLN 221
Query: 326 DLPVEAINVFHEM--IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
+ EA + M K + F +L+SA I + IH + + Y +
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIP 277
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
+A +++ YAK +L AR F M R++VSW +MI G+ +G EA+ LF + EN
Sbjct: 278 VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN 337
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
L+ D +T S+L + ++ + +K+V + + LSV NSLI++Y++ G L+ A
Sbjct: 338 LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEAL 397
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
F + E L SW +++GA A HG E L++F M L ++PD++TF +L+ACSH G
Sbjct: 398 LCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGG 456
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
LV+EGL+ F+ M Y I + HY C+IDLL RAG + EA +++ SMP+ S+ AL
Sbjct: 457 LVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAF 516
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
C ++ E + AK++L++EP +Y ++SN G W++ A +R +
Sbjct: 517 TGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYN 576
Query: 684 S-TPGYSLI 691
TPG S +
Sbjct: 577 PKTPGCSWL 585
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 213/423 (50%), Gaps = 18/423 (4%)
Query: 48 KSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLV 107
K +L L K+ H +K + + F+ + L++ Y++ + +DA ++FDE+ +++V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 108 AYTSIITAYAHSGGSCVYGA---FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
+ +I G + A F S + + + V+ + L+ +++ G
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 165 IHGYAIRRGF-GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
+H +++G C T+L+ Y KCG + A VF + + WN L+++Y+
Sbjct: 164 LHCLMVKQGLESSC--FPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVL--WNALVSSYV 219
Query: 224 HNGQALEAFELFRQMIHRK--VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
NG EAF L + M K D T ++ + +C + GK IH + ++ + D
Sbjct: 220 LNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFD 275
Query: 282 MVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
+ TAL+++Y+K + ++ AR+ FE + ++ V +N M+ G+ +N EA+ +F +M+
Sbjct: 276 IPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLL 335
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
++ P+ F +++S+ + I + + V + + +AN +I +Y++ G L
Sbjct: 336 ENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSE 395
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALS 459
A L F+ +R DLVSWTS+I HG +E++ +F +LQ+ L+ D +T + +L A S
Sbjct: 396 ALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK--LQPDKITFLEVLSACS 453
Query: 460 QLG 462
G
Sbjct: 454 HGG 456
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 13/325 (4%)
Query: 37 SLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHR 96
SLD + ++ C ++ G ++H +K L S CF +SL+ Y + G + +A R
Sbjct: 139 SLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARR 198
Query: 97 VFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM--QDQRLYPNRVTLVSLLHAAA 154
VF+ + ++DLV + +++++Y +G + AF + M R + T SLL A
Sbjct: 199 VFEAVLDRDLVLWNALVSSYVLNG--MIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC- 255
Query: 155 KLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 214
+++G+ IH + + D T LL+MY K + A F M V S
Sbjct: 256 ---RIEQGKQIHAILFKVSYQF-DIPVATALLNMYAKSNHLSDARECFESM--VVRNVVS 309
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN +I + NG+ EA LF QM+ + PD LT A+ + SCA+ + K + +
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVT 369
Query: 275 RMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
+ G + +L+ YS+ ++++A F +R D V + ++ + E++
Sbjct: 370 KKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQ 429
Query: 334 VFHEMIKMSVSPNVALFLNLISAVS 358
+F M++ + P+ FL ++SA S
Sbjct: 430 MFESMLQ-KLQPDKITFLEVLSACS 453
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 262 bits (669), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 247/438 (56%), Gaps = 11/438 (2%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
+ +H ++I G T L+ L S + +F + D ++N ++ K
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
LP+ + + M+ +VSP+ F ++I + +DL +R+ + +H + + + +
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
++ Y+KCG ++ AR VF+RM + +V+W S+++G+ +G DEAI +F ++
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NSLITTYAKCGKLNMAR 503
DS T +SLL A +Q G +S VH Y G +L+V +LI Y++CG + AR
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVH--QYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK--LGNIKPDELTFTSILTACSH 561
+F +M E + +W AM+ AY HG + ++LFN M+ G I P+ +TF ++L+AC+H
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI-PNNVTFVAVLSACAH 322
Query: 562 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA-- 619
+GLVEEG +++ M + Y ++PG H+ C++D+L RAG L EAY + + +T + A
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA 382
Query: 620 -LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTK 678
+L AC+++ + ++G IAK+++ LEP N +V++SNI A G+ DEV+HIR
Sbjct: 383 LWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMM 442
Query: 679 DKELKSTPGYSLIELDKQ 696
L+ GYS+IE++ +
Sbjct: 443 RNNLRKQVGYSVIEVENK 460
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 162/305 (53%), Gaps = 11/305 (3%)
Query: 235 FRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
+R+M+ V P T + I SCA+L L GK +H + + G D ALV YSK
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 295 F-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
D+ AR++F+R+ K V +N +++G+ +N L EAI VF++M + P+ A F++L
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+SA + + L +H Y++ V++ +I+ Y++CG + AR VF++M+ ++
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRI-DSVTLISLLQALSQLGCLSAVKEVH- 471
+WT+MI+ Y HG+ +A+ LF ++ + I ++VT +++L A + G + + V+
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 472 --CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS----WNAMLGAYA 525
+YR G E V ++ + G L+ A Q+ + W AMLGA
Sbjct: 335 RMTKSYRLIPGVEHHV--CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACK 392
Query: 526 MHGNY 530
MH NY
Sbjct: 393 MHRNY 397
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 136/279 (48%), Gaps = 16/279 (5%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
Y + +S S T +KSC L L GK VH ++ D +V ++L+ YS+
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
G +E A +VFD + K +VA+ S+++ + +G A ++ M++ P+ T V
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG--LADEAIQVFYQMRESGFEPDSATFV 212
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
SLL A A+ G++ G +H Y I G + + T L+++Y +CG V A VF KM
Sbjct: 213 SLLSACAQTGAVSLGSWVHQYIISEGLDL-NVKLGTALINLYSRCGDVGKAREVFDKMK- 270
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDYLCHG 266
T V +W +I+AY +G +A ELF +M +P+ +T + +CA + G
Sbjct: 271 -ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 267 KSIHGYMIRM-----GVE-----PDMVACTALVDLYSKF 295
+S++ M + GVE DM+ +D KF
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKF 368
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E ++ + ++ S F D + L +C G + G VH I L+ + +G++LI
Sbjct: 191 EAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALI 250
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG--AFRIASTMQDQ-RL 139
LYS G + A VFD++ ++ A+T++I+AY G YG A + + M+D
Sbjct: 251 NLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHG----YGQQAVELFNKMEDDCGP 306
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 199
PN VT V++L A A G ++EGR+++ + + ++DM + G + A
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Query: 200 AVFGKMNAT--STTVGSWNPLIAA 221
+++AT +T W ++ A
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGA 390
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 177/679 (26%), Positives = 323/679 (47%), Gaps = 46/679 (6%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
+D I L+ C + + G+ + IK ++ + F+ +++I +Y ++ L DAH+V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 98 FDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD-QRLYPNRVTLVSLLHAAAKL 156
FDE++ +++V +T++++ Y G A + M D + N ++L A +
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKP--NKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 157 GSLQEGRAIH---GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVG 213
G +Q G ++ G RG D + +++DMY K G + A + F ++ S+T
Sbjct: 121 GDIQLGILVYERIGKENLRG----DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSST-- 174
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLP---------------------------- 245
SWN LI+ Y G EA LF +M V+
Sbjct: 175 SWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGL 234
Query: 246 --DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARK 302
D L + +C+ L GK +H +++ G+E A +AL+D+YS + A
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 303 MFERLR---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
+F + + N ++N M++G+L N+ A+ + ++ + + + + +
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
++RL +H V+ Y + + ++ +A G +Q A +F+R+ ++D+++++ +
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 420 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 479
I G V G A LFR L + L D + ++L+ S L L K++H L + +
Sbjct: 415 IRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY 474
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
E +L+ Y KCG+++ LF M ER + SW ++ + +G E + F+
Sbjct: 475 ESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHK 534
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M I+P+++TF +L+AC HSGL+EE +M EY + P HY C++DLL +AG
Sbjct: 535 MINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAG 594
Query: 600 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 659
EA L+ MP +LL+AC + + + IA+++LK P + S Y +SN
Sbjct: 595 LFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSN 654
Query: 660 ILAEGGRWDEVAHIRAMTK 678
A G WD+++ +R K
Sbjct: 655 AYATLGMWDQLSKVREAAK 673
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 8/295 (2%)
Query: 29 LDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEY 88
L + S D ++ LK C+ L G +VH + D VGS L+ L++
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANV 390
Query: 89 GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVS 148
G ++DAH++F + NKD++A++ +I SG + + AF + + L ++ + +
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL--AFYLFRELIKLGLDADQFIVSN 448
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
+L + L SL G+ IHG I++G+ + + T L+DMY KCG + +F M
Sbjct: 449 ILKVCSSLASLGWGKQIHGLCIKKGYE-SEPVTATALVDMYVKCGEIDNGVVLFDGM--L 505
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
V SW +I + NG+ EAF F +MI+ + P+ +T + +C L +S
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARS 565
Query: 269 IHGYM-IRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLR-NKDAVIYNVMMT 320
M G+EP + +VDL + + +A ++ ++ D I+ ++T
Sbjct: 566 TLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLT 620
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 255/459 (55%), Gaps = 7/459 (1%)
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDL----YSKF 295
H K+ D + N IL ++ + L I Y I+ +E D+ L++ ++
Sbjct: 21 HSKI--DTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTES 77
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
++ AR +FE + D VI+N M GY + P+E ++F E+++ + P+ F +L+
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
A + + + R +H ++ V + +I+ Y +C + AR VF+R+ +V
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
+ +MITGY +EA+ LFR +Q + L+ + +TL+S+L + + LG L K +H
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 535
+ K + VN +LI +AKCG L+ A +F++M + +W+AM+ AYA HG + +
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 595
+F M+ N++PDE+TF +L ACSH+G VEEG + F M+ ++ IVP HY ++DLL
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 596 SRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYV 655
SRAG L +AY + +P + + LL+AC + + ++ E ++++I +L+ + YV
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 656 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
++SN+ A +W+ V +R + KD++ PG S IE++
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVN 476
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 192/383 (50%), Gaps = 12/383 (3%)
Query: 154 AKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC---GGVKMAAAVFGKMNATST 210
+K SL+E I YAI+ + D F L++ + + A +F M+
Sbjct: 37 SKCNSLRELMQIQAYAIKSH--IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
+ +N + Y LE F LF +++ +LPD T + + +CA L G+ +H
Sbjct: 95 VI--FNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 271 GYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 329
+++G++ ++ C L+++Y++ DV AR +F+R+ V YN M+TGY + + P
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 389
EA+++F EM + PN L+++S+ + L + L + IH Y +H + V++ +I
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 390 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 449
+AKCG L A +F +MR +D +W++MI Y +HG ++++++F ++ EN++ D +
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 450 TLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQ 507
T + LL A S G + ++ F G S+ + S++ ++ G L A
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQMVSKF-GIVPSIKHYGSMVDLLSRAGNLEDAYEFID 391
Query: 508 QMT-ERCLTSWNAMLGAYAMHGN 529
++ W +L A + H N
Sbjct: 392 KLPISPTPMLWRILLAACSSHNN 414
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 135/250 (54%), Gaps = 8/250 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
LK+C LE G+++H S+KL L+ + +V +LI +Y+E ++ A VFD I +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V Y ++IT YA A + MQ + L PN +TL+S+L + A LGSL G+ IH
Sbjct: 196 VCYNAMITGYARRNRP--NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 167 GYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
YA + F C + T L+DM+ KCG + A ++F KM T +W+ +I AY ++
Sbjct: 254 KYAKKHSF--CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ--AWSAMIVAYANH 309
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVA 284
G+A ++ +F +M V PD +T + +C+ + G+ M+ + G+ P +
Sbjct: 310 GKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 285 CTALVDLYSK 294
++VDL S+
Sbjct: 370 YGSMVDLLSR 379
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
RR E L + +++ + + L SC LG L+ GK +H + K +
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
V ++LI ++++ G L+DA +F+++ KD A++++I AYA+ G + + + M+
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA--EKSMLMFERMRS 324
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGV 195
+ + P+ +T + LL+A + G ++EGR + + FG+ I +++D+ + G +
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK-FGIVPSIKHYGSMVDLLSRAGNL 383
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAA 221
+ A K+ S T W L+AA
Sbjct: 384 EDAYEFIDKL-PISPTPMLWRILLAA 408
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 215/380 (56%), Gaps = 2/380 (0%)
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
A ++N +M Y++++ P++AI V+ M++ +V P+ +I A + D L + +H
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
+R ++ + I Y K G + AR VF+ R L SW ++I G H G +E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH--CLTYRAFHGKELSVNNSL 489
A+ +F ++R L D T++S+ + LG LS ++H L + ++ + NSL
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 549
I Y KCG++++A ++F++M +R + SW++M+ YA +GN E L+ F M+ ++P++
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 550 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 609
+TF +L+AC H GLVEEG F M E+ + PG HY CI+DLLSR GQL EA +V+
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 610 SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 669
MP + L+ C +GD E+ E +A +++LEP N YV+++N+ A G W +
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKD 441
Query: 670 VAHIRAMTKDKELKSTPGYS 689
V +R + K K++ P YS
Sbjct: 442 VERVRKLMKTKKVAKIPAYS 461
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 156/320 (48%), Gaps = 5/320 (1%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN ++ +Y+ + L+A +++ M+ VLPD +L I + ++ GK +H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 275 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
R+G D + + LY K + ARK+F+ + +N ++ G EA+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA--NQIIHT 391
+F +M + + P+ +++ ++ L D+ LA +H VL+ + + +I N +I
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 392 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 451
Y KCG + A +F MR R++VSW+SMI GY +G+ EA+ FR ++ +R + +T
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 452 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQMT 510
+ +L A G + K + F + LS ++ ++ G+L A+ + ++M
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 511 ERC-LTSWNAMLGAYAMHGN 529
+ + W ++G G+
Sbjct: 385 MKPNVMVWGCLMGGCEKFGD 404
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 147/303 (48%), Gaps = 8/303 (2%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
+ ++ YL + S D ++ + +K+ V + GK +H +++L D F S I
Sbjct: 100 DAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFI 159
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
LY + G+ E+A +VFDE + L ++ +II H+G + A + M+ L P+
Sbjct: 160 TLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA--NEAVEMFVDMKRSGLEPD 217
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIR-RGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
T+VS+ + LG L +H ++ + D + +L+DMY KCG + +A+ +
Sbjct: 218 DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHI 277
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F +M V SW+ +I Y NG LEA E FRQM V P+ +T + +C
Sbjct: 278 FEEMR--QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 262 YLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAV-IYNVM 318
+ GK+ M +EP + +VDL S+ + +A+K+ E + K V ++ +
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Query: 319 MTG 321
M G
Sbjct: 396 MGG 398
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 281/537 (52%), Gaps = 18/537 (3%)
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 224
IHGY ++ G D F + L + ++ A+++F + ++T + +N +I Y
Sbjct: 47 IHGYMVKTGLDKDD--FAVSKLLAFSSVLDIRYASSIFE--HVSNTNLFMFNTMIRGYSI 102
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
+ + AF +F Q+ + + D + + SC+ + G+ +HG +R G
Sbjct: 103 SDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL 162
Query: 285 CTALVDLYSKF-DVTKARKMFERL-RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
AL+ Y ++ ARK+F+ + ++ DAV ++ +M GYL+ A+++F M K
Sbjct: 163 RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
V NV+ L+ +SA+SDL D+ A S H ++ + + +I Y K G + AR
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
+F+ +D+V+W MI Y G ++E + L R ++ E ++ +S T + LL + +
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
+ V L + + +L+ YAK G L A +F +M ++ + SW AM+
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 523 AYAMHGNYAEVLKLFNHMKLGN--IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 580
Y HG E + LFN M+ N ++P+E+TF +L ACSH GLV EG++ F+ M+ Y+
Sbjct: 403 GYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYS 462
Query: 581 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 640
P HY C++DLL RAGQL EAY L++++P T S A LL+ACR+YG+ ++GE++
Sbjct: 463 FTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVM 522
Query: 641 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL---KSTPGYSLIELD 694
++ ++ + + +L++ A G ++ + D EL + GYS IE++
Sbjct: 523 MRLAEMGETHPADAILLAGTHAVAGNPEK-------SLDNELNKGRKEAGYSAIEIE 572
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 238/480 (49%), Gaps = 22/480 (4%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG 120
R+H +K L+ D F S L+ +S + A +F+ ++N +L + ++I Y+ S
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 121 GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI 180
AF + + ++ + L +R + ++ L + ++ + G +HG A+R GF V ++
Sbjct: 105 EP--ERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL 162
Query: 181 FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
L+ Y CG + A VF +M + V +++ L+ YL + A +LFR M
Sbjct: 163 -RNALIHFYCVCGKISDARKVFDEMPQSVDAV-TFSTLMNGYLQVSKKALALDLFRIMRK 220
Query: 241 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTK 299
+V+ ++ TL + + + ++L L +S H I++G++ D+ TAL+ +Y K ++
Sbjct: 221 SEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISS 280
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
AR++F+ KD V +N M+ Y K L E + + +M + PN + F+ L+S+ +
Sbjct: 281 ARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAY 340
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
+ R++ + + + ++ YAK G L+ A +FNRM+ +D+ SWT+M
Sbjct: 341 SEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAM 400
Query: 420 ITGYVHHGHIDEAIILFRLLQREN--LRIDSVTLISLLQALSQLG-------CLSAVKEV 470
I+GY HG EA+ LF ++ EN +R + +T + +L A S G C + E
Sbjct: 401 ISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEA 460
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 529
+ T + H ++ + G+L A L + + T+W A+L A ++GN
Sbjct: 461 YSFTPKVEH------YGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGN 514
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
++ S+ ++ S + L + LG L + HV IK+ L+ D + ++LI +Y + G
Sbjct: 218 MRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSG--GSCVYGAFRIASTMQDQRLYPNRVTLVS 148
+ A R+FD KD+V + +I YA +G CV+ + M+ +++ PN T V
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW----LLRQMKYEKMKPNSSTFVG 333
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
LL + A + GR + + D I T L+DMY K G ++ A +F +M
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIAL-DAILGTALVDMYAKVGLLEKAVEIFNRMK-- 390
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHR--KVLPDLLTLANAILSCA 258
V SW +I+ Y +G A EA LF +M KV P+ +T + +C+
Sbjct: 391 DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/612 (27%), Positives = 309/612 (50%), Gaps = 94/612 (15%)
Query: 89 GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVS 148
GK+ +A ++FD + +D+V +T +IT Y
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYI------------------------------- 88
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
KLG ++E R + R + + T ++ Y + + +A +F +M
Sbjct: 89 ------KLGDMREARELFDRVDSRK----NVVTWTAMVSGYLRSKQLSIAEMLFQEM--P 136
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
V SWN +I Y +G+ +A ELF +M R ++ ++ A++ +D +
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV-SWNSMVKALVQRGRID---EAMN 192
Query: 269 IHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 327
+ M R D+V+ TA+VD L V +AR++F+ + ++ + +N M+TGY +N+
Sbjct: 193 LFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNR 248
Query: 328 PVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 387
EA +F M + RD ++ +R++ + +
Sbjct: 249 IDEADQLFQVMPE--------------------RDFASWNTMITGFIRNREMNKA----- 283
Query: 388 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRI 446
CG +F+RM ++++SWT+MITGYV + +EA+ +F ++L+ +++
Sbjct: 284 -------CG-------LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
+ T +S+L A S L L +++H L ++ H K V ++L+ Y+K G+L AR +F
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF 389
Query: 507 QQ--MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
+ +R L SWN+M+ YA HG+ E ++++N M+ KP +T+ ++L ACSH+GL
Sbjct: 390 DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGL 449
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
VE+G++ F+ ++R+ ++ E HY C++DL RAG+L + N + + S + +L
Sbjct: 450 VEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAIL 509
Query: 625 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 684
SAC ++ + I + + K++L+ ++ +YVL+SNI A G+ +E A +R K+K LK
Sbjct: 510 SACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKK 569
Query: 685 TPGYSLIELDKQ 696
PG S +++ KQ
Sbjct: 570 QPGCSWVKVGKQ 581
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 185/389 (47%), Gaps = 58/389 (14%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ--D 136
++++ Y +L A +F E+ +++V++ ++I YA SG RI ++ D
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSG--------RIDKALELFD 164
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
+ N V+ S++ A + G + E + RR D + T ++D K G V
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR-----DVVSWTAMVDGLAKNGKVD 219
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A +F M + SWN +I Y N + EA +LF +V+P
Sbjct: 220 EARRLFDCM--PERNIISWNAMITGYAQNNRIDEADQLF------QVMP----------- 260
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYN 316
E D+ I G++ ++ KA +F+R+ K+ + +
Sbjct: 261 --ERDFASWNTMITGFI-------------------RNREMNKACGLFDRMPEKNVISWT 299
Query: 317 VMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
M+TGY++N EA+NVF +M++ SV PNV +++++SA SDL + + IH + +
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNR--MRSRDLVSWTSMITGYVHHGHIDEAI 433
+ + + +++ Y+K G L AR +F+ + RDL+SW SMI Y HHGH EAI
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLG 462
++ +++ + +VT ++LL A S G
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 20/248 (8%)
Query: 365 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV 424
L RSI+ R RV +I K G + AR +F+ + RD+V+WT +ITGY+
Sbjct: 33 LVRSIYSSSSR----PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYI 88
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 484
G + EA LF R + R + VT +++ + LS + + ++ + +
Sbjct: 89 KLGDMREARELF---DRVDSRKNVVTWTAMVSGYLRSKQLSIAE----MLFQEMPERNVV 141
Query: 485 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 544
N++I YA+ G+++ A LF +M ER + SWN+M+ A G E + LF M
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP--- 198
Query: 545 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 604
+ D +++T+++ + +G V+E ++F M I +N +I ++ ++ EA
Sbjct: 199 -RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII-----SWNAMITGYAQNNRIDEA 252
Query: 605 YNLVKSMP 612
L + MP
Sbjct: 253 DQLFQVMP 260
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDE--ITNK 104
L +C L L G+++H K + V S+L+ +YS+ G+L A ++FD + +
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 105 DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
DL+++ S+I YAH G A + + M+ P+ VT ++LL A + G +++G
Sbjct: 398 DLISWNSMIAVYAHHGHG--KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGME 455
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
+R E T L+D+ + G +K
Sbjct: 456 FFKDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 204/335 (60%), Gaps = 1/335 (0%)
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
+ D+RL +IH V+R + + + + N ++H YA CG + A VF++M +DLV+W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 420 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 479
I G+ +G +EA+ L+ + + ++ D T++SLL A +++G L+ K VH +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
+ L +N L+ YA+CG++ A+ LF +M ++ SW +++ A++G E ++LF +
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 540 MK-LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
M+ + P E+TF IL ACSH G+V+EG + FR M EY I P H+ C++DLL+RA
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 599 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 658
GQ+ +AY +KSMP + TLL AC ++GD+++ E QIL+LEP +S YVL+S
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 659 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
N+ A RW +V IR +K PG+SL+E+
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 150/293 (51%), Gaps = 18/293 (6%)
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 324
G++IH +IR G + +L+ LY+ DV A K+F+++ KD V +N ++ G+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
N P EA+ ++ EM + P+ ++L+SA + + + L + +H Y+++ +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR-EN 443
+N ++ YA+CG ++ A+ +F+ M ++ VSWTS+I G +G EAI LF+ ++ E
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 444 LRIDSVTLISLLQALSQLGCLSA-------VKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
L +T + +L A S G + ++E + + R H ++ A+
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH------FGCMVDLLARA 240
Query: 497 GKLNMA-RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 548
G++ A Y+ + + W +LGA +HG+ L F +++ ++P+
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 140/276 (50%), Gaps = 19/276 (6%)
Query: 53 LGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSI 112
+ + G+ +H I+ S +V +SL+ LY+ G + A++VFD++ KDLVA+ S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 113 ITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR 172
I +A +G A + + M + + P+ T+VSLL A AK+G+L G+ +H Y I+
Sbjct: 61 INGFAENGKP--EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 173 GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF 232
G + LLD+Y +CG V+ A +F +M ++ SW LI NG EA
Sbjct: 119 GL-TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV--SWTSLIVGLAVNGFGKEAI 175
Query: 233 ELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM----GVEPDMVACTA 287
ELF+ M + +LP +T + +C+ + G Y RM +EP +
Sbjct: 176 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG---FEYFRRMREEYKIEPRIEHFGC 232
Query: 288 LVDLYSKFDVTKARKMFERLRN----KDAVIYNVMM 319
+VDL ++ + +K +E +++ + VI+ ++
Sbjct: 233 MVDLLAR--AGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 10/311 (3%)
Query: 156 LGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSW 215
+ ++ G IH IR GFG + + +LL +Y CG V A VF KM +W
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYV-QNSLLHLYANCGDVASAYKVFDKMPEKDLV--AW 57
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 275
N +I + NG+ EA L+ +M + + PD T+ + + +CA++ L GK +H YMI+
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 276 MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 334
+G+ ++ + L+DLY++ V +A+ +F+ + +K++V + ++ G N EAI +
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 335 FHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI--TRVEIANQIIHT 391
F M + P F+ ++ A S ++ + +R +Y R+E ++
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDL 236
Query: 392 YAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEA-IILFRLLQRENLRIDSV 449
A+ G ++ A M + ++V W +++ HG D A ++LQ E
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 296
Query: 450 TLISLLQALSQ 460
L+S + A Q
Sbjct: 297 VLLSNMYASEQ 307
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L Y ++ + D I L +C +G L GKRVHV IK+ L + + L+
Sbjct: 72 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 131
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYP 141
LY+ G++E+A +FDE+ +K+ V++TS+I A +G G F+ + + L P
Sbjct: 132 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG--LLP 189
Query: 142 NRVTLVSLLHAAAKLGSLQEG-----RAIHGYAIR---RGFGVCDEIFETTLLDMYHKCG 193
+T V +L+A + G ++EG R Y I FG ++D+ + G
Sbjct: 190 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG--------CMVDLLARAG 241
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAA-YLHNGQALEAF 232
VK A M V W L+ A +H L F
Sbjct: 242 QVKKAYEYIKSMPMQPNVV-IWRTLLGACTVHGDSDLAEF 280
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 254/500 (50%), Gaps = 41/500 (8%)
Query: 230 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTAL 288
E F L+ MI +V PD T + + + +L K IH ++I G + +L
Sbjct: 116 ECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSL 172
Query: 289 VDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
V Y + + A K+F R+ + D +NVM+ GY K +EA+ ++ +M+ + P+
Sbjct: 173 VKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDE 232
Query: 348 ALFLNLISAVSDLRDIRLARSIHGYVLRHQ--YITRVEIANQIIHTYAKC---------- 395
L+L+ L DIRL + +HG++ R Y + + ++N ++ Y KC
Sbjct: 233 YTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAF 292
Query: 396 ---------------------GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI- 433
G ++ A+ VF++M RDLVSW S++ GY G +
Sbjct: 293 DAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVR 352
Query: 434 -ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 492
+ + + E ++ D VT++SL+ + G LS + VH L R + ++++LI
Sbjct: 353 ELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDM 412
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
Y KCG + A +F+ TE+ + W +M+ A HGN + L+LF M+ + P+ +T
Sbjct: 413 YCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTL 472
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV-KSM 611
++LTACSHSGLVEEGL +F M ++ P HY ++DLL RAG++ EA ++V K M
Sbjct: 473 LAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKM 532
Query: 612 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 671
P S + ++LSACR D E E ++LKLEP YVL+SNI A GRW
Sbjct: 533 PMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSD 592
Query: 672 HIRAMTKDKELKSTPGYSLI 691
R +++ +K T GYS +
Sbjct: 593 KTREAMENRGVKKTAGYSSV 612
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 236/508 (46%), Gaps = 55/508 (10%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRL----YSEYGKLEDAHRVFDEIT-NKDLVAYTSIIT 114
K+V ++ NL D F S LI Y E L+ A +F T N ++ Y ++I+
Sbjct: 51 KQVLAQIMRFNLICDTFPMSRLIFFSAITYPE--NLDLAKLLFLNFTPNPNVFVYNTMIS 108
Query: 115 AYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF 174
A + S C F + S+M R+ P+R T + L+ A++ L E + IH + I G
Sbjct: 109 AVSSSKNEC----FGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGC 161
Query: 175 GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 234
+L+ Y + G +A VF +M V S+N +I Y G +LEA +L
Sbjct: 162 LSLGNYLWNSLVKFYMELGNFGVAEKVFARM--PHPDVSSFNVMIVGYAKQGFSLEALKL 219
Query: 235 FRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLY 292
+ +M+ + PD T+ + ++ C L + GK +HG++ R G +++ AL+D+Y
Sbjct: 220 YFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMY 279
Query: 293 SK----------FDVTKARKM----------------------FERLRNKDAVIYNVMMT 320
K FD K + M F+++ +D V +N ++
Sbjct: 280 FKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLF 339
Query: 321 GYLKNDLPVEAI-NVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
GY K + +F+EM I V P+ ++LIS ++ ++ R +HG V+R Q
Sbjct: 340 GYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 438
+++ +I Y KCG ++ A +VF +D+ WTSMITG HG+ +A+ LF
Sbjct: 400 KGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 439 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF-HGKELSVNNSLITTYAKCG 497
+Q E + ++VTL+++L A S G + V F E SL+ + G
Sbjct: 460 MQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAG 519
Query: 498 KLNMARYLFQ-QMTERCLTS-WNAMLGA 523
++ A+ + Q +M R S W ++L A
Sbjct: 520 RVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
Query: 54 GRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSII 113
G L G+ VH I+L L D F+ S+LI +Y + G +E A VF T KD+ +TS+I
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMI 441
Query: 114 TAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG 173
T A G A ++ MQ++ + PN VTL+++L A + G ++EG + + ++
Sbjct: 442 TGLAFHGNG--QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH-MKDK 498
Query: 174 FGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF 232
FG E +L+D+ + G V+ A + K + W +++A G+ +E
Sbjct: 499 FGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA-CRGGEDIETA 557
Query: 233 EL 234
EL
Sbjct: 558 EL 559
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 258 bits (660), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 237/421 (56%), Gaps = 6/421 (1%)
Query: 277 GVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 335
G P M L+++Y KF++ A ++F+++ ++ + + M++ Y K + +A+ +
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 336 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 395
M++ +V PNV + +++ + + + D+R+ +H +++ + V + + +I +AK
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 396 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 455
G + A VF+ M + D + W S+I G+ + D A+ LF+ ++R + TL S+L
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 456 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT 515
+A + L L + H + + ++L +NN+L+ Y KCG L A +F QM ER +
Sbjct: 268 RACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 516 SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 575
+W+ M+ A +G E LKLF MK KP+ +T +L ACSH+GL+E+G FRSM
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 576 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEI 635
+ Y I P HY C+IDLL +AG+L +A L+ M + TLL ACR+ + +
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445
Query: 636 GEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDK 695
E AK+++ L+P ++ +Y L+SNI A +WD V IR +D+ +K PG S IE++K
Sbjct: 446 AEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNK 505
Query: 696 Q 696
Q
Sbjct: 506 Q 506
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 169/355 (47%), Gaps = 27/355 (7%)
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
F+ + LI +Y ++ L DAH++FD++ ++++++T++I+AY S A + M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAY--SKCKIHQKALELLVLML 154
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
+ PN T S+L + + + R +H I+ G D + L+D++ K G
Sbjct: 155 RDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLE-SDVFVRSALIDVFAKLGEP 210
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+ A +VF +M V WN +I + N ++ A ELF++M + + TL + +
Sbjct: 211 EDALSVFDEMVTGDAIV--WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 314
+C L L G H ++++ + D++ ALVD+Y K + A ++F +++ +D +
Sbjct: 269 ACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD---LRD----IRLAR 367
++ M++G +N EA+ +F M PN + ++ A S L D R +
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 368 SIHGY-VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMI 420
++G +R Y +I K G L A + N M D V+W +++
Sbjct: 387 KLYGIDPVREHY-------GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 13/276 (4%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+SC + + + +H IK L SD FV S+LI ++++ G+ EDA VFDE+ D
Sbjct: 169 LRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+ + SII +A + S V A + M+ + TL S+L A L L+ G H
Sbjct: 226 IVWNSIIGGFAQNSRSDV--ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
+ ++ D I L+DMY KCG ++ A VF +M V +W+ +I+ NG
Sbjct: 284 VHIVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQMKERD--VITWSTMISGLAQNG 338
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM-GVEPDMVAC 285
+ EA +LF +M P+ +T+ + +C+ L G M ++ G++P
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 286 TALVDLYSKF-DVTKARKMFERLR-NKDAVIYNVMM 319
++DL K + A K+ + DAV + ++
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 174/578 (30%), Positives = 273/578 (47%), Gaps = 76/578 (13%)
Query: 191 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 250
K G + A VF M T +WN ++ +Y G EA LF Q+ PD +
Sbjct: 16 KSGRIASARQVFDGMPELDTV--AWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSF 73
Query: 251 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL-- 307
+ +CA L + G+ I +IR G + +L+D+Y K D A K+F +
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 308 --RN-----------------------------KDAVIYNVMMTGYLKNDLPVEAINVFH 336
RN + A +N+M++G+ +++F
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 337 EMIKMSVSPNVALFLNLISAVS-DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK- 394
EM++ P+ F +L++A S D ++ R +H +L++ + + VE N ++ Y K
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 395 ------------------------------CGYLQYARLVFNRMRSRDLVSWTSMITGYV 424
G + A VF+ +++V+WT+MITGY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-CLTYRAFHGKEL 483
+G ++A+ F + + + D ++L A S L L K +H CL + F G
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 484 SVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
V N+L+ YAKCG + A F + + L SWN ML A+ +HG + LKL+++M
Sbjct: 374 -VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV-HYNCIIDLLSRAGQLT 602
IKPD +TF +LT CSHSGLVEEG IF SM+++Y I P EV H C+ID+ R G L
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRI-PLEVDHVTCMIDMFGRGGHLA 491
Query: 603 EAYNLVKSMPS----THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 658
EA +L + S + ++++ TLL AC + TE+G ++K + EP S+VL+S
Sbjct: 492 EAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLS 551
Query: 659 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
N+ GRW E +R ++ +K TPG S IE+ Q
Sbjct: 552 NLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQ 589
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/595 (23%), Positives = 253/595 (42%), Gaps = 105/595 (17%)
Query: 79 SSLIRLYSEY------GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAS 132
S L+RL S+ G++ A +VFD + D VA+ +++T+Y+ G A + +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLG--LHQEAIALFT 59
Query: 133 TMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHK 191
++ P+ + ++L A LG+++ GR I IR GF C + +L+DMY K
Sbjct: 60 QLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGF--CASLPVNNSLIDMYGK 117
Query: 192 CGG------------------VKMAAAVFGKMNATSTTVG-------------SWNPLIA 220
C V + +F MNA +WN +I+
Sbjct: 118 CSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMIS 177
Query: 221 AYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC-AELDYLCHGKSIHGYMIRMGVE 279
+ H G+ LF++M+ + PD T ++ + +C A+ + +G+ +H M++ G
Sbjct: 178 GHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWS 237
Query: 280 PDMVACTALVDLYSKF--------------------------------DVTKARKMFERL 307
+ A +++ Y+K + KA ++F
Sbjct: 238 SAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLA 297
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
K+ V + M+TGY +N +A+ F EM+K V + + ++ A S L + +
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK 357
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
IHG ++ + + N +++ YAKCG ++ A F + ++DLVSW +M+ + HG
Sbjct: 358 MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHG 417
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLL-----QALSQLGCL---SAVKE---------V 470
D+A+ L+ + ++ D+VT I LL L + GC+ S VK+ V
Sbjct: 418 LADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV 477
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 530
C+ G L+ L TTY+ + ++ + C T W+ LG
Sbjct: 478 TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGR-----EV 532
Query: 531 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI-REYTIVPG 584
++VLK+ +E++F + +G +EG + R M+ R PG
Sbjct: 533 SKVLKIAE-------PSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPG 580
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
+ LR ++++ S D A L +C L L GK +H I +VG++L+
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALV 379
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
LY++ G +++A R F +I NKDLV++ +++ A+ G A ++ M + P+
Sbjct: 380 NLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHG--LADQALKLYDNMIASGIKPD 437
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT-LLDMYHKCGGVKMA--- 198
VT + LL + G ++EG I ++ + + + E+ T ++DM+ + G + A
Sbjct: 438 NVTFIGLLTTCSHSGLVEEGCMIF-ESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Query: 199 AAVFGKMNATSTTVGSWNPLIAA 221
A + + S+ SW L+ A
Sbjct: 497 ATTYSSLVTDSSNNSSWETLLGA 519
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 488 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
S I + AK G++ AR +F M E +WN ML +Y+ G + E + LF ++ + KP
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP 68
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 607
D+ +FT+IL+ C+ G V+ G +I +IR V+ N +ID+ + A +
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVN-NSLIDMYGKCSDTLSANKV 127
Query: 608 VKSM-PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEG 664
+ M + + C+LL A Y + E EA +++ R + ++ NI+ G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAW----NIMISG 178
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 184/681 (27%), Positives = 322/681 (47%), Gaps = 85/681 (12%)
Query: 58 FGKRVHVDSIKLNL-NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY 116
G +H IK L NSD V S+ + Y L A+++FDE+ +D +A+ I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 117 AHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF-- 174
SG A + MQ T+V LL + EGR IHGY +R G
Sbjct: 65 LRSGN--WEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 175 --GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN-----------ATSTTVG-------- 213
+C+ +L+ MY + G ++++ VF M ++ T +G
Sbjct: 123 NVSMCN-----SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 214 --------------SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
+WN L++ Y G + +A + ++M + P ++++ + + AE
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE 237
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVM 318
+L GK+IHGY++R + D+ T L+D+Y K + AR +F+ + K+ V +N +
Sbjct: 238 PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
++G L +A + M K + P+ +
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITW---------------------------- 329
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAII 434
N + YA G + A V +M+ + ++VSWT++ +G +G+ A+
Sbjct: 330 -------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK 382
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 494
+F +Q E + ++ T+ +LL+ L L L + KEVH R + V +L+ Y
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYG 442
Query: 495 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 554
K G L A +F + + L SWN ML YAM G E + F+ M ++PD +TFTS
Sbjct: 443 KSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 555 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 614
+L+ C +SGLV+EG + F M Y I+P H +C++DLL R+G L EA++ +++M
Sbjct: 503 VLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK 562
Query: 615 HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 674
+ LS+C+++ D E+ E K++ LEP NS++Y+++ N+ + RW++V IR
Sbjct: 563 PDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIR 622
Query: 675 AMTKDKELKSTPGYSLIELDK 695
+ ++ ++ +S I++D+
Sbjct: 623 NLMRNNRVRVQDLWSWIQIDQ 643
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 3 MKHPSITGNLVA------SCRRR-HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGR 55
MK + N+V+ C + ++ L+ ++ ++ + + ++ LK L
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSL 411
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA 115
L GK VH ++ NL D +V ++L+ +Y + G L+ A +F I NK L ++ ++
Sbjct: 412 LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMG 471
Query: 116 YAHSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
YA G G AF S M + + P+ +T S+L G +QEG
Sbjct: 472 YAMFGRGEEGIAAF---SVMLEAGMEPDAITFTSVLSVCKNSGLVQEG 516
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 250/496 (50%), Gaps = 33/496 (6%)
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV----------ACT 286
Q++ R P T N I C++ L GK +H ++ G P +V C
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 287 ALVDLYSKFD----------------------VTKARKMFERLRNKDAVIYNVMMTGYLK 324
+LVD FD + +ARK+F+ + KD+ + M+TGY+K
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 325 NDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
D P EA+ ++ M ++ S PN+ ++A + ++ IR + IHG+++R +
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
+ + ++ Y KCG + AR +F+++ +D+VSWTSMI Y E LF L
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
R + T +L A + L K+VH R ++SL+ Y KCG + A+
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
++ + L SW +++G A +G E LK F+ + KPD +TF ++L+AC+H+G
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
LVE+GL+ F S+ ++ + HY C++DLL+R+G+ + +++ MP S ++
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
L C YG+ ++ E A+++ K+EP N +YV ++NI A G+W+E +R ++ +
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 684 STPGYSLIELDKQREV 699
PG S E+ ++R V
Sbjct: 555 KRPGSSWTEIKRKRHV 570
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 210/463 (45%), Gaps = 53/463 (11%)
Query: 16 CRRRHYGE---------VLRRYLDL----KNSKFSLDCSAITLCLKSCVALGRLEFGKRV 62
CR +GE +LR + L K S C+ I +C ++ LE GK+V
Sbjct: 52 CRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRA----LEEGKKV 107
Query: 63 HVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-- 120
H + + L+R+Y++ G L DA +VFDE+ N+DL ++ ++ YA G
Sbjct: 108 HEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLL 167
Query: 121 -------------GSCVYGAFRIASTMQDQR-----LY----------PNRVTLVSLLHA 152
S + A +DQ LY PN T+ + A
Sbjct: 168 EEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAA 227
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 212
AA + ++ G+ IHG+ +R G DE+ ++L+DMY KCG + A +F K+ V
Sbjct: 228 AAAVKCIRRGKEIHGHIVRAGLD-SDEVLWSSLMDMYGKCGCIDEARNIFDKI--VEKDV 284
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY 272
SW +I Y + + E F LF +++ P+ T A + +CA+L GK +HGY
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY 344
Query: 273 MIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 331
M R+G +P A ++LVD+Y+K ++ A+ + + D V + ++ G +N P EA
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 332 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA-RSIHGYVLRHQYITRVEIANQIIH 390
+ F ++K P+ F+N++SA + + + +H+ + ++
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 391 TYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEA 432
A+ G + + V + M + W S++ G +G+ID A
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 221/395 (55%), Gaps = 1/395 (0%)
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
A +F + + +N M+ GY+ EA+ ++EM++ P+ + L+ A +
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
L+ IR + IHG V + V + N +I+ Y +CG ++ + VF ++ S+ SW+SM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 420 ITGYVHHGHIDEAIILFRLLQRE-NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 478
++ G E ++LFR + E NL+ + ++S L A + G L+ +H R
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 479 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 538
+ V SL+ Y KCG L+ A ++FQ+M +R +++AM+ A+HG L++F+
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 539 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
M ++PD + + S+L ACSHSGLV+EG ++F M++E + P HY C++DLL RA
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 599 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 658
G L EA ++S+P + T LS CR+ + E+G+ A+++LKL N Y+LIS
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 659 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
N+ ++G WD+VA R K LK TPG+S++EL
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVEL 479
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 257
AA++F ++ T +N +I Y++ EA + +M+ R PD T + +C
Sbjct: 85 AASIFRGIDDPCTF--DFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKAC 142
Query: 258 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYN 316
L + GK IHG + ++G+E D+ +L+++Y + ++ + +FE+L +K A ++
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS 202
Query: 317 VMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
M++ + E + +F M + ++ + ++ + A ++ + L SIHG++LR
Sbjct: 203 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 435
+ + + ++ Y KCG L A +F +M R+ +++++MI+G HG + A+ +
Sbjct: 263 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 436 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
F + +E L D V +S+L A S G + + V
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y E+++R + N F+ C LK+C L + GK++H KL L +D FV +S
Sbjct: 120 YNEMMQRGNEPDN--FTYPC-----LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNS 172
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG--GSCVYGAFRIASTMQDQR 138
LI +Y G++E + VF+++ +K +++S+++A A G C+ FR +
Sbjct: 173 LINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL-LFR--GMCSETN 229
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
L +VS L A A G+L G +IHG+ + R + I +T+L+DMY KCG + A
Sbjct: 230 LKAEESGMVSALLACANTGALNLGMSIHGFLL-RNISELNIIVQTSLVDMYVKCGCLDKA 288
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F KM + +++ +I+ +G+ A +F +MI + PD + + + +C+
Sbjct: 289 LHIFQKMEKRNNL--TYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACS 346
Query: 259 ELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSK 294
+ G+ + M++ G VEP LVDL +
Sbjct: 347 HSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 393 AKCGY------LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLR 445
AKC + + YA +F + + +MI GYV+ +EA+ + ++QR N
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN-E 129
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
D+ T LL+A ++L + K++H ++ ++ V NSLI Y +CG++ ++ +
Sbjct: 130 PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAV 189
Query: 506 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGL 564
F+++ + SW++M+ A A G ++E L LF M N+K +E S L AC+++G
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGA 249
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
+ G+ I ++R + + V + ++D+ + G L +A ++ + M ++ ++
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQTS-LVDMYVKCGCLDKALHIFQKM-EKRNNLTYSAMI 307
Query: 625 SACRLYGDTEIGEAIAKQILK--LEPRNSSSYVLISNILAEGGRWDEVAHIRA-MTKDKE 681
S L+G+ E + +++K LEP + YV + N + G E + A M K+ +
Sbjct: 308 SGLALHGEGESALRMFSKMIKEGLEP-DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGK 366
Query: 682 LKST 685
++ T
Sbjct: 367 VEPT 370
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 241/459 (52%), Gaps = 25/459 (5%)
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL----VDLYSKF-DVTKARKMFERLRNK 310
+C+++ L K +H + +R P+ A L + L S F DV A ++F+ + N
Sbjct: 57 TCSDMSQL---KQLHAFTLRT-TYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 311 DAVIYNVMMTGYLKN-DLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARS 368
+ ++N ++ + EA ++ +M+ + SP+ F ++ A + + +
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 428
+H +++H + V + N +IH Y CG L AR VF+ M R LVSW SMI V G
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH---GKELSV 485
D A+ LFR +QR + D T+ S+L A + LG LS H R ++ V
Sbjct: 233 YDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM--KLG 543
NSLI Y KCG L MA +FQ M +R L SWNAM+ +A HG E + F+ M K
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
N++P+ +TF +L AC+H G V +G Q F M+R+Y I P HY CI+DL++RAG +TE
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 604 AYNLVKSMPSTHSSAALCTLLSACRLYG-DTEIGEAIAKQILKLEPRNSSS-------YV 655
A ++V SMP + +LL AC G E+ E IA+ I+ + N SS YV
Sbjct: 412 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 471
Query: 656 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
L+S + A RW++V +R + + ++ PG S IE++
Sbjct: 472 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEIN 510
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 20/311 (6%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
L+ + S D LK+C + GK+VH +K D +V + LI LY G
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
L+ A +VFDE+ + LV++ S+I A G A ++ MQ + P+ T+ S+L
Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDALVRFGE--YDSALQLFREMQ-RSFEPDGYTMQSVL 258
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVC------DEIFETTLLDMYHKCGGVKMAAAVFGK 204
A A LGSL G H + +R+ C D + + +L++MY KCG ++MA VF
Sbjct: 259 SACAGLGSLSLGTWAHAFLLRK----CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 314
Query: 205 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK--VLPDLLTLANAILSCAELDY 262
M + SWN +I + +G+A EA F +M+ ++ V P+ +T +++C +
Sbjct: 315 MQKRD--LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 372
Query: 263 LCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVIYNVMM 319
+ G+ M+R +EP + +VDL ++ +T+A M + K DAVI+ ++
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Query: 320 TGYLKNDLPVE 330
K VE
Sbjct: 433 DACCKKGASVE 443
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 166/360 (46%), Gaps = 12/360 (3%)
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
F+ +++L S + + A RVFD I N + ++I A AH ++
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 143
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
P++ T +L A A + EG+ +H ++ GFG D L+ +Y CG +
Sbjct: 144 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCL 202
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+A VF +M S SWN +I A + G+ A +LFR+M R PD T+ + +
Sbjct: 203 DLARKVFDEMPERSLV--SWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLS 259
Query: 256 SCAELDYLCHGKSIHGYMIR---MGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKD 311
+CA L L G H +++R + V D++ +L+++Y K + A ++F+ ++ +D
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDIRLARSI 369
+N M+ G+ + EA+N F M+ + +V PN F+ L+ A + + R
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 370 HGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHG 427
++R I +E I+ A+ GY+ A +V + D V W S++ G
Sbjct: 380 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 239/450 (53%), Gaps = 12/450 (2%)
Query: 249 TLANAILSCA--ELDYLCHGKSIHGYMIRMGVEPD-MVACTALVDLYSKFDVTKARKMFE 305
+L A+ SC EL L H K + R G D +V C L DV A K+F+
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCY----LRLGHDVC-AEKLFD 90
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDI 363
+ +D V +N +++GY + V M+ ++ PN FL++ISA
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 423
R IHG V++ + V++ N I+ Y K G L + +F + ++LVSW +MI +
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT-YRAFHGKE 482
+ +G ++ + F + +R D T +++L++ +G + + +H L + F G +
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNK 270
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
+ +L+ Y+K G+L + +F ++T +W AML AYA HG + +K F M
Sbjct: 271 -CITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 602
I PD +TFT +L ACSHSGLVEEG F +M + Y I P HY+C++DLL R+G L
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 603 EAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 662
+AY L+K MP SS LL ACR+Y DT++G A+++ +LEPR+ +YV++SNI +
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Query: 663 EGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
G W + + IR + K K L G S IE
Sbjct: 450 ASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 170/344 (49%), Gaps = 25/344 (7%)
Query: 26 RRYLDLKNSKFSLDC--SAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIR 83
RR+L + SLD S++ +KSCV++ E + +H +K F+G L+
Sbjct: 18 RRFLSQSSFVHSLDANVSSLIAAVKSCVSI---ELCRLLHCKVVKSVSYRHGFIGDQLVG 74
Query: 84 LYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG--GSCVYGAFRIASTM--QDQRL 139
Y G A ++FDE+ +DLV++ S+I+ Y+ G G C F + S M +
Sbjct: 75 CYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKC----FEVLSRMMISEVGF 130
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMA 198
PN VT +S++ A GS +EGR IHG ++ FGV +E+ ++ Y K G + +
Sbjct: 131 RPNEVTFLSMISACVYGGSKEEGRCIHGLVMK--FGVLEEVKVVNAFINWYGKTGDLTSS 188
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNG---QALEAFELFRQMIHRKVLPDLLTLANAIL 255
+F ++ + SWN +I +L NG + L F + R++ H PD T +
Sbjct: 189 CKLFEDLSIKNLV--SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE---PDQATFLAVLR 243
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 314
SC ++ + + IHG ++ G + TAL+DLYSK + + +F + + D++
Sbjct: 244 SCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMA 303
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+ M+ Y + +AI F M+ +SP+ F +L++A S
Sbjct: 304 WTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS 347
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 128/250 (51%), Gaps = 8/250 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
+ +CV G E G+ +H +K + + V ++ I Y + G L + ++F++++ K+L
Sbjct: 141 ISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNL 200
Query: 107 VAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
V++ ++I + +G F ++ + + P++ T +++L + +G ++ + I
Sbjct: 201 VSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE---PDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 166 HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
HG + GF ++ T LLD+Y K G ++ ++ VF ++ TS +W ++AAY +
Sbjct: 258 HGLIMFGGFS-GNKCITTALLDLYSKLGRLEDSSTVFHEI--TSPDSMAWTAMLAAYATH 314
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVA 284
G +A + F M+H + PD +T + + +C+ + GK M R ++P +
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374
Query: 285 CTALVDLYSK 294
+ +VDL +
Sbjct: 375 YSCMVDLLGR 384
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D + L+SC +G + + +H + + + + ++L+ LYS+ G+LED+ VF
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYG--AFRIASTMQDQRLYPNRVTLVSLLHAAAKL 156
EIT+ D +A+T+++ AYA G +G A + M + P+ VT LL+A +
Sbjct: 294 HEITSPDSMAWTAMLAAYATHG----FGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 157 GSLQEGRAIHGYAIRRGFGVCDEIFE--TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 214
G ++EG+ H + D + + ++D+ + G ++ A + +M ++ G
Sbjct: 350 GLVEEGK--HYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSS-GV 406
Query: 215 WNPLIAA 221
W L+ A
Sbjct: 407 WGALLGA 413
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 267/527 (50%), Gaps = 39/527 (7%)
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
V L+ A + GR +H + + G I L+ Y +CG V A VF +M
Sbjct: 20 VELIEANGRDRLFCRGRVLHAHLVTSGIARLTRI-AAKLVTFYVECGKVLDARKVFDEM- 77
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
+ +I A NG E+ + FR+M + D + + + + L G
Sbjct: 78 -PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
K IH +++ E D ++L+D+YSKF +V ARK+F L +D V++N M++GY N
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANN 196
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
EA+N+ +M + + P+V + LIS S +R+ E
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN-------------------EEKV 237
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
++I+ GY D+VSWTS+I+G VH+ ++A F+ + L
Sbjct: 238 SEILELMCLDGY------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY 285
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLNMAR 503
+S T+I+LL A + L + KE+H Y G E V ++L+ Y KCG ++ A
Sbjct: 286 PNSATIITLLPACTTLAYMKHGKEIH--GYSVVTGLEDHGFVRSALLDMYGKCGFISEAM 343
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
LF++ ++ ++N+M+ YA HG + ++LF+ M+ K D LTFT+ILTACSH+G
Sbjct: 344 ILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAG 403
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
L + G +F M +Y IVP HY C++DLL RAG+L EAY ++K+M L
Sbjct: 404 LTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGAL 463
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 670
L+ACR +G+ E+ AK + +LEP NS + +L++++ A G W+ V
Sbjct: 464 LAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 206/439 (46%), Gaps = 44/439 (10%)
Query: 3 MKHPSITGNLV---ASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFG 59
M I+G +V A R +Y E L + ++ LD + LK+ L EFG
Sbjct: 77 MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
K +H +K + SD F+ SSLI +YS++G++ +A +VF ++ +DLV + ++I+ YA++
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANN 196
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
S A + M+ + P+ +T +L I G++ R E
Sbjct: 197 --SQADEALNLVKDMKLLGIKPDVITWNAL---------------ISGFSHMRNEEKVSE 239
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
I E LD Y V SW +I+ +HN Q +AF+ F+QM+
Sbjct: 240 ILELMCLDGY-------------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQML 280
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VT 298
+ P+ T+ + +C L Y+ HGK IHGY + G+E +AL+D+Y K ++
Sbjct: 281 THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFIS 340
Query: 299 KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+A +F + K V +N M+ Y + L +A+ +F +M + F +++A S
Sbjct: 341 EAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
Query: 359 DLRDIRLARSIHGYVLRHQY--ITRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVS 415
L +++ +++++Y + R+E ++ + G L A + MR DL
Sbjct: 401 HAGLTDLGQNLF-LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFV 459
Query: 416 WTSMITGYVHHGHIDEAII 434
W +++ +HG+++ A I
Sbjct: 460 WGALLAACRNHGNMELARI 478
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 197/455 (43%), Gaps = 37/455 (8%)
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
+ + L+ Y E GK+ DA +VFDE+ +D+ +I A A +G + M
Sbjct: 53 IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNG--YYQESLDFFREMYK 110
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
L + + SLL A+ L + G+ IH ++ + D ++L+DMY K G V
Sbjct: 111 DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE-SDAFIVSSLIDMYSKFGEVG 169
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A VF + V +N +I+ Y +N QA EA L + M + PD++T I
Sbjct: 170 NARKVFSDLGEQDLVV--FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG 227
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYN 316
+ + I M G +PD+V+ T+++
Sbjct: 228 FSHMRNEEKVSEILELMCLDGYKPDVVSWTSII--------------------------- 260
Query: 317 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 376
+G + N +A + F +M+ + PN A + L+ A + L ++ + IHGY +
Sbjct: 261 ---SGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVT 317
Query: 377 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 436
+ + ++ Y KCG++ A ++F + + V++ SMI Y +HG D+A+ LF
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELF 377
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAK 495
++ ++D +T ++L A S G + + L + L ++ +
Sbjct: 378 DQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGR 437
Query: 496 CGKLNMARYLFQQM-TERCLTSWNAMLGAYAMHGN 529
GKL A + + M E L W A+L A HGN
Sbjct: 438 AGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 12/300 (4%)
Query: 338 MIKMSVSPN------VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
M K+++ P+ + ++ LI A R R +H +++ IA +++
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 392 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 451
Y +CG + AR VF+ M RD+ MI +G+ E++ FR + ++ L++D+ +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 452 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 511
SLL+A L K +HCL + + + + +SLI Y+K G++ AR +F + E
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 512 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
+ L +NAM+ YA + E L L MKL IKPD +T+ ++++ SH E+ +I
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 572 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH----SSAALCTLLSAC 627
M + P V + II L Q +A++ K M TH +SA + TLL AC
Sbjct: 241 LELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML-THGLYPNSATIITLLPAC 298
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 253 bits (646), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 183/679 (26%), Positives = 319/679 (46%), Gaps = 51/679 (7%)
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA 115
+E K VH +KL +G++LI Y + G +A VF +++ +V+YT++I+
Sbjct: 96 VEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 116 YAHSGGSC----VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR 171
++ V+ R A +Q PN T V++L A ++ G IHG ++
Sbjct: 155 FSRLNLEIEALKVFFRMRKAGLVQ-----PNEYTFVAILTACVRVSRFSLGIQIHGLIVK 209
Query: 172 RGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALE 230
GF + +F +L+ +Y K G + V SWN ++++ + G++ +
Sbjct: 210 SGF--LNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHK 267
Query: 231 AFELFRQMIHRKVLP-DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
AF+LF +M + D TL+ + SC + L G+ +HG IR+G+ ++ AL+
Sbjct: 268 AFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALI 327
Query: 290 DLYSKF-DVTKARKMFERLRNKDAVI-------------------------------YNV 317
YSKF D+ K ++E + +DAV YN
Sbjct: 328 GFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNA 387
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
+M G+ +N ++A+ +F +M++ V + + A + + +++ IHG+ ++
Sbjct: 388 LMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFG 447
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR--DLVSWTSMITGYVHHGHIDEAIIL 435
I ++ +C + A +F++ S + TS+I GY +G D+A+ L
Sbjct: 448 TAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSL 507
Query: 436 F-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 494
F R L + L +D V+L +L LG ++HC +A + ++S+ NSLI+ YA
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYA 567
Query: 495 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 554
KC + A +F M E + SWN+++ Y + N E L L++ M IKPD +T T
Sbjct: 568 KCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTL 627
Query: 555 ILTAC--SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
+++A + S + +F SM Y I P HY + +L G L EA + + SMP
Sbjct: 628 VISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMP 687
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 672
+ L LL +CR++ +T + + +AK IL +P S Y+L SNI + G W
Sbjct: 688 VQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEM 747
Query: 673 IRAMTKDKELKSTPGYSLI 691
IR +++ + P S I
Sbjct: 748 IREEMRERGYRKHPAKSWI 766
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 176/417 (42%), Gaps = 41/417 (9%)
Query: 36 FSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAH 95
F +D ++ L SC L G+ +H +I++ L + V ++LI YS++ ++
Sbjct: 281 FGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVE 340
Query: 96 RVFDEITNKDLVAYTSIITAYAHSG-------------------------GSCVYG---- 126
+++ + +D V +T +ITAY G G C G
Sbjct: 341 SLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLK 400
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG--FGVCDEIFETT 184
A ++ + M + + +L S + A + + IHG+ I+ G F C +T
Sbjct: 401 ALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPC---IQTA 457
Query: 185 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF-RQMIHRKV 243
LLDM +C + A +F + + + + +I Y NG +A LF R + +K+
Sbjct: 458 LLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKL 517
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARK 302
D ++L + C L + G IH Y ++ G D+ +L+ +Y+K D A K
Sbjct: 518 FLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIK 577
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
+F +R D + +N +++ Y+ EA+ ++ M + + P++ +ISA
Sbjct: 578 IFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTES 637
Query: 363 IRLARSIHGYVLRHQYITRVEIANQ----IIHTYAKCGYLQYARLVFNRMRSRDLVS 415
+L+ S L + I +E + + G L+ A N M + VS
Sbjct: 638 NKLS-SCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVS 693
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 19/259 (7%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
CR H + L+ + D+ L ++T + +C + + +++H IK +
Sbjct: 393 CRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNP 452
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEI-TNKDLV-AYTSIITAYAHSG-GSCVYGAFRIAS 132
+ ++L+ + + ++ DA +FD+ +N D A TSII YA +G F
Sbjct: 453 CIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFH--R 510
Query: 133 TMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC 192
T+ +Q+L+ + V+L +L LG + G IH YA++ G+ D +L+ MY KC
Sbjct: 511 TLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY-FSDISLGNSLISMYAKC 569
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL-- 250
A +F M V SWN LI+ Y+ EA L+ +M +++ PD++TL
Sbjct: 570 CDSDDAIKIFNTMREHD--VISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTL 627
Query: 251 ---------ANAILSCAEL 260
+N + SC +L
Sbjct: 628 VISAFRYTESNKLSSCRDL 646
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 272/533 (51%), Gaps = 51/533 (9%)
Query: 145 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 204
T V +L + SL E + H + ++ G D + L+ K +
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGL-FHDTFSASKLVAFAATNPEPKTVSYAHSI 96
Query: 205 MNATSTTVG-SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 263
+N + G + N +I AY ++ A +FR+M+ V PD + + +CA
Sbjct: 97 LNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 156
Query: 264 CHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMT 320
G+ IHG I+ G+ D+ LV++Y + F++ ARK+ +R+ +DAV +N +++
Sbjct: 157 EEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEI--ARKVLDRMPVRDAVSWNSLLS 214
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
YL+ L EA +F EM + +V
Sbjct: 215 AYLEKGLVDEARALFDEMEERNV------------------------------------- 237
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLL 439
E N +I YA G ++ A+ VF+ M RD+VSW +M+T Y H G +E + +F ++L
Sbjct: 238 --ESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKML 295
Query: 440 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCG 497
+ D TL+S+L A + LG LS + VH Y HG E+ + +L+ Y+KCG
Sbjct: 296 DDSTEKPDGFTLVSVLSACASLGSLSQGEWVH--VYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 498 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 557
K++ A +F+ ++R +++WN+++ ++HG + L++F+ M KP+ +TF +L+
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 558 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 617
AC+H G++++ ++F M Y + P HY C++DLL R G++ EA LV +P+ +S
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 618 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 670
L +LL AC+ +G E E IA ++L+L R+SS Y +SN+ A GRW++V
Sbjct: 474 ILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV 526
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 215/523 (41%), Gaps = 94/523 (17%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYS---EYGKLEDAHRVFDEITNKDLVAYTSIITAY 116
++ H +K L D F S L+ + E + AH + + I + + + S+I AY
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 117 AHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV 176
A+S V A + M ++P++ + +L A A +EGR IHG I+ G V
Sbjct: 116 ANSSTPEV--ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL-V 172
Query: 177 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
D E TL+++Y + G ++A V +M SWN L++AYL G EA LF
Sbjct: 173 TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV--SWNSLLSAYLEKGLVDEARALFD 230
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 296
+M R V +++ G + G
Sbjct: 231 EMEERNV--------------ESWNFMISGYAAAGL------------------------ 252
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLIS 355
V +A+++F+ + +D V +N M+T Y E + VF++M+ S P+ ++++S
Sbjct: 253 VKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLS 312
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
A + L + +H Y+ +H +A ++ Y+KCG + A VF RD+ +
Sbjct: 313 ACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVST 372
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
W S+I+ HG +A+ +F + E + + +T I +L A + +G
Sbjct: 373 WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGM------------ 420
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-----ERCLTSWNAMLGAYAMHGNY 530
L+ AR LF+ M+ E + + M+ G
Sbjct: 421 -----------------------LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 531 AEVLKLFNHMKLGNIKPDE--LTFTSILTACSHSGLVEEGLQI 571
E +L N I DE + S+L AC G +E+ +I
Sbjct: 458 EEAEELVNE-----IPADEASILLESLLGACKRFGQLEQAERI 495
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 145/333 (43%), Gaps = 46/333 (13%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D + T LK+C A E G+++H IK L +D FV ++L+ +Y
Sbjct: 139 DKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRS---------- 188
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
G F IA + D+ + V+ SLL A + G
Sbjct: 189 ---------------------------GYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
+ E RA+ R + ++ Y G VK A VF M V SWN +
Sbjct: 222 VDEARALFDEMEERNVESWN-----FMISGYAAAGLVKEAKEVFDSMPVRD--VVSWNAM 274
Query: 219 IAAYLHNGQALEAFELFRQMIHRKV-LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 277
+ AY H G E E+F +M+ PD TL + + +CA L L G+ +H Y+ + G
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 278 VEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 336
+E + TALVD+YSK + KA ++F +D +N +++ + L +A+ +F
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 337 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 369
EM+ PN F+ ++SA + + + AR +
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKL 427
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
EV + LD +S D + L +C +LG L G+ VHV K + + F+ ++L+
Sbjct: 289 EVFNKMLD--DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA-HSGGSCVYGAFRIASTMQDQRLYP 141
+YS+ GK++ A VF + +D+ + SII+ + H G A I S M + P
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK---DALEIFSEMVYEGFKP 403
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAI 165
N +T + +L A +G L + R +
Sbjct: 404 NGITFIGVLSACNHVGMLDQARKL 427
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 238/464 (51%), Gaps = 37/464 (7%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDL-----YSKFDVTKARKMFERLRNKDAVIYNVMMTG 321
K IH M++ G+ D A T + S F + A+ +F+ D ++N+M+ G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF-LPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
+ +D P ++ ++ M+ S N F +L+ A S+L IH + + Y
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID----------- 430
V N +I++YA G + A L+F+R+ D VSW S+I GYV G +D
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 431 --------------------EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
EA+ LF +Q ++ D+V+L + L A +QLG L K +
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 530
H + + + LI YAKCG++ A +F+ + ++ + +W A++ YA HG+
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 531 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC 590
E + F M+ IKP+ +TFT++LTACS++GLVEEG IF SM R+Y + P HY C
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 591 IIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRN 650
I+DLL RAG L EA ++ MP ++ LL ACR++ + E+GE I + ++ ++P +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 651 SSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
YV +NI A +WD+ A R + K++ + PG S I L+
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 185/427 (43%), Gaps = 55/427 (12%)
Query: 46 CLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL---YSEYGKLEDAHRVFDEIT 102
CL+ C + E K++H +K L D + + + + L A VFD
Sbjct: 20 CLQRC---SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 103 NKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY----P-NRVTLVSLLHAAAKLG 157
D + +I G SC R S + QR+ P N T SLL A + L
Sbjct: 77 RPDTFLWNLMI-----RGFSCSDEPER--SLLLYQRMLCSSAPHNAYTFPSLLKACSNLS 129
Query: 158 SLQEGRAIHG--------------------YAIRRGFGVC----------DEIFETTLLD 187
+ +E IH YA+ F + D++ +++
Sbjct: 130 AFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIK 189
Query: 188 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
Y K G + +A +F KM + SW +I+ Y+ EA +LF +M + V PD
Sbjct: 190 GYVKAGKMDIALTLFRKMAEKNAI--SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 248 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 306
++LANA+ +CA+L L GK IH Y+ + + D V L+D+Y+K ++ +A ++F+
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 307 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 366
++ K + +++GY + EAI+ F EM KM + PNV F +++A S +
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 367 RSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGY 423
+ I Y + Y + I + I+ + G L A+ M + + V W +++
Sbjct: 368 KLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 424 VHHGHID 430
H +I+
Sbjct: 427 RIHKNIE 433
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L+ + +++NS D ++ L +C LG LE GK +H K + D +G LI
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL--Y 140
+Y++ G++E+A VF I K + A+T++I+ YA+ G +G I+ M+ Q++
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG----HGREAISKFMEMQKMGIK 345
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAA 199
PN +T ++L A + G ++EG+ I Y++ R + + I ++D+ + G + A
Sbjct: 346 PNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404
Query: 200 AVFGKMNATSTTVGSWNPLIAA 221
+M V W L+ A
Sbjct: 405 RFIQEMPLKPNAV-IWGALLKA 425
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 265/515 (51%), Gaps = 6/515 (1%)
Query: 184 TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
+LL +Y KCG + A +F +M V S N + +L N + F L ++M+
Sbjct: 95 SLLSLYAKCGKLVDAIKLFDEMPMRD--VISQNIVFYGFLRNRETESGFVLLKRMLGSGG 152
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARK 302
D TL + C ++ K IH I G + ++ L+ Y K + R
Sbjct: 153 F-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
+F+ + +++ + +++G ++N+L + + +F M + V PN +L+ ++A S +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 422
I + IH + ++ + + I + ++ Y+KCG ++ A +F D VS T ++ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 423 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY-RAFHGK 481
+G +EAI F + + + ID+ + ++L L K++H L R F G
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
VNN LI Y+KCG L ++ +F++M +R SWN+M+ A+A HG+ LKL+ M
Sbjct: 392 TF-VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
+KP ++TF S+L ACSH GL+++G ++ M + I P HY CIID+L RAG L
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 602 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 661
EA + + S+P LL AC +GDTE+GE A+Q+ + P +SS+++LI+NI
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIY 570
Query: 662 AEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+ G+W E A K + G S IE++ +
Sbjct: 571 SSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHK 605
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 212/467 (45%), Gaps = 31/467 (6%)
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
V +SL+ LY++ GKL DA ++FDE+ +D+++ I Y F + M
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQN--IVFYGFLRNRETESGFVLLKRMLG 149
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGV 195
+ + TL +L + IH AI G+ EI L+ Y KCG
Sbjct: 150 SGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYD--KEISVGNKLITSYFKCGCS 206
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
VF M + V + +I+ + N + LF M V P+ +T +A+
Sbjct: 207 VSGRGVFDGM--SHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 314
+C+ + G+ IH + + G+E ++ +AL+D+YSK + A +FE D V
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR----LARSIH 370
V++ G +N EAI F M++ V + N++SAV + I L + +H
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA----NVVSAVLGVSFIDNSLGLGKQLH 380
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
V++ ++ + N +I+ Y+KCG L ++ VF RM R+ VSW SMI + HGH
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGL 440
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLG-------CLSAVKEVHCLTYRAFHGKEL 483
A+ L+ + ++ VT +SLL A S +G L+ +KEVH + R H
Sbjct: 441 AALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH---- 496
Query: 484 SVNNSLITTYAKCGKLNMARYLFQQMTERC-LTSWNAMLGAYAMHGN 529
+I + G L A+ + + W A+LGA + HG+
Sbjct: 497 --YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGD 541
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 188/402 (46%), Gaps = 26/402 (6%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
D + +T+ L C K +H +I + + VG+ LI Y + G V
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 98 FDEITNKDLVAYTSIITAYA----HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAA 153
FD +++++++ T++I+ H G R+ S M+ ++PN VT +S L A
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDG------LRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 154 AKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVF---GKMNATS 209
+ + EG+ IH A+ +G+ E+ E+ L+DMY KCG ++ A +F +++ S
Sbjct: 267 SGSQRIVEGQQIH--ALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 210 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD-YLCHGKS 268
TV ++ NG EA + F +M+ V D + +A+L + +D L GK
Sbjct: 325 MTV-----ILVGLAQNGSEEEAIQFFIRMLQAGVEID-ANVVSAVLGVSFIDNSLGLGKQ 378
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 327
+H +I+ + L+++YSK D+T ++ +F R+ ++ V +N M+ + ++
Sbjct: 379 LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGH 438
Query: 328 PVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR-HQYITRVEIAN 386
+ A+ ++ EM + V P FL+L+ A S + I R + + H R E
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYT 498
Query: 387 QIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHG 427
II + G L+ A+ + + + D W +++ HG
Sbjct: 499 CIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 155/330 (46%), Gaps = 31/330 (9%)
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALF--------------------- 350
V++N +++ Y K V+AI +F EM ++ +S N+ +
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 351 -------LNLISAVSDLRDIRL-ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
L ++ +V D + L + IH + Y + + N++I +Y KCG R
Sbjct: 151 GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 403 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
VF+ M R++++ T++I+G + + ++ + LF L++R + +SVT +S L A S
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
+ +++H L ++ EL + ++L+ Y+KCG + A +F+ TE S +L
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
A +G+ E ++ F M ++ D +++L + G Q+ S++ +
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL-HSLVIKRKFS 389
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
N +I++ S+ G LT++ + + MP
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S+T LV + E ++ ++ + + +D + ++ L L GK++H
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
IK + + FV + LI +YS+ G L D+ VF + ++ V++ S+I A+A G
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG--LA 441
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGR-------AIHGYAIRRGFGVCDE 179
A ++ M + P VT +SLLHA + +G + +GR +HG R C
Sbjct: 442 ALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC-- 499
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 227
++DM + G +K A + + W L+ A +G
Sbjct: 500 -----IIDMLGRAGLLKEAKSFIDSL-PLKPDCKIWQALLGACSFHGD 541
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 236/431 (54%), Gaps = 3/431 (0%)
Query: 267 KSIHGYMIRMGV-EPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
K IH ++R G E + + L +L D+ AR++F+ + ++N + GY++N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
LP E++ ++ +M + V P+ + ++ A+S L D ++H +V+++ + +A
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
+++ Y K G L A +F M+ +DLV+W + + V G+ A+ F + + ++
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
DS T++S+L A QLG L +E++ + + V N+ + + KCG AR L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 506 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 565
F++M +R + SW+ M+ YAM+G+ E L LF M+ ++P+ +TF +L+ACSH+GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 566 EEGLQIFRSMIR--EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
EG + F M++ + + P + HY C++DLL R+G L EAY +K MP + L
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
L AC ++ D +G+ +A +++ P S +VL+SNI A G+WD V +R+ + K
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 684 STPGYSLIELD 694
YS +E +
Sbjct: 448 KVAAYSSVEFE 458
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 180/372 (48%), Gaps = 12/372 (3%)
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 222
+ IH +R GF + + T LL+ G + A VF +M+ + WN L Y
Sbjct: 28 KKIHAIVLRTGFSEKNSLL-TQLLENLVVIGDMCYARQVFDEMHKPRIFL--WNTLFKGY 84
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL-DYLCHGKSIHGYMIRMGVEPD 281
+ N E+ L+++M V PD T + + ++L D+ C G ++H ++++ G
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC-GFALHAHVVKYGFGCL 143
Query: 282 MVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
+ T LV +Y KF +++ A +FE ++ KD V +N + ++ A+ F++M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
+V + ++++SA L + + I+ + + + + N + + KCG +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
AR++F M+ R++VSW++MI GY +G EA+ LF +Q E LR + VT + +L A S
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNS----LITTYAKCGKLNMARYLFQQMTERCLTS 516
G ++ K L ++ + K L ++ + G L A ++M T
Sbjct: 324 AGLVNEGKRYFSLMVQS-NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 517 -WNAMLGAYAMH 527
W A+LGA A+H
Sbjct: 383 IWGALLGACAVH 394
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 142/300 (47%), Gaps = 6/300 (2%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
K++H ++ + + + L+ G + A +VFDE+ + + ++ Y +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
+ + + M+D + P+ T ++ A ++LG G A+H + ++ GFG C
Sbjct: 88 --QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG-CLG 144
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
I T L+ MY K G + A +F M +WN +A + G + A E F +M
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLV--AWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK 299
V D T+ + + +C +L L G+ I+ + ++ +++ A +D++ K T+
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 300 -ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
AR +FE ++ ++ V ++ M+ GY N EA+ +F M + PN FL ++SA S
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 8/275 (2%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L Y +++ D +K+ LG G +H +K V + L+
Sbjct: 92 ESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELV 151
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
+Y ++G+L A +F+ + KDLVA+ + + +G S + A + M + +
Sbjct: 152 MMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI--ALEYFNKMCADAVQFD 209
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
T+VS+L A +LGSL+ G I+ A + C+ I E LDM+ KCG + A +F
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEID-CNIIVENARLDMHLKCGNTEAARVLF 268
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 262
+M V SW+ +I Y NG + EA LF M + + P+ +T + +C+
Sbjct: 269 EEMK--QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 263 LCHGKSIHGYMIR---MGVEPDMVACTALVDLYSK 294
+ GK M++ +EP +VDL +
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 13/190 (6%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
D + L +C LG LE G+ ++ + K ++ + V ++ + ++ + G E A +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 98 FDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG 157
F+E+ +++V+++++I YA +G S A + +TMQ++ L PN VT + +L A + G
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDS--REALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFE------TTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
+ EG+ ++ D+ E ++D+ + G ++ A KM T
Sbjct: 326 LVNEGKRYFSLMVQSN----DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 212 VGSWNPLIAA 221
G W L+ A
Sbjct: 382 -GIWGALLGA 390
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 179/639 (28%), Positives = 311/639 (48%), Gaps = 44/639 (6%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
+SC + + ++V + + F+ + I Y + G ++DA +F+E+ +D
Sbjct: 68 FRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDG 127
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
++ ++ITA A +G S FR+ M + + +L + + L+ R +H
Sbjct: 128 GSWNAVITACAQNGVS--DEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLH 185
Query: 167 GYAIRRGF-GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
++ G+ G D ET+++D+Y KC + A VF ++ S SWN ++ YL
Sbjct: 186 CAVVKYGYSGNVD--LETSIVDVYGKCRVMSDARRVFDEIVNPSDV--SWNVIVRRYLEM 241
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
G EA +F +M+ V P T+++ +L+C+ L GK IH +++ V D V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 286 TALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-V 343
T++ D+Y K D + AR++F++ R+KD + M+GY + L EA +F M + + V
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 344 SPNVAL--------------FLNL----------------ISAVSDLRDIRLARSIHGYV 373
S N L FL L ++ S + D+++ + HG++
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGHIDEA 432
RH Y T V +AN ++ Y KCG LQ A + F +M RD VSW +++TG G ++A
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 433 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 492
+ F +Q E + TL +LL + + L+ K +H R + ++ + +++
Sbjct: 482 LSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
Y+KC + A +F++ R L WN+++ +G EV +LF ++ +KPD +TF
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTF 600
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
IL AC G VE G Q F SM +Y I P HY+C+I+L + G L + + MP
Sbjct: 601 LGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQILK---LEP 648
L + AC+ Y +++G AK+++ L+P
Sbjct: 661 FDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 222/475 (46%), Gaps = 43/475 (9%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
EV R + + ++ LKSC + L +++H +K + + + +S++
Sbjct: 145 EVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIV 204
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG--GSCVYGAFRIASTMQDQRLY 140
+Y + + DA RVFDEI N V++ I+ Y G V F+ M + +
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFK----MLELNVR 260
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P T+ S++ A ++ +L+ G+ IH A++ V D + T++ DMY KC ++ A
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSV-VADTVVSTSVFDMYVKCDRLESARR 319
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP--------------- 245
VF + S + SW ++ Y +G EA ELF M R ++
Sbjct: 320 VFDQ--TRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWD 377
Query: 246 ---DLLTLANAILS-------------CAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
D LTL + C+ + + GK HG++ R G + +++ AL+
Sbjct: 378 EALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALL 437
Query: 290 DLYSKFDVTKARKMFERLRN--KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
D+Y K ++ ++ R + +D V +N ++TG + +A++ F E +++ P+
Sbjct: 438 DMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSK 496
Query: 348 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 407
L++ +++ + L ++IHG+++R Y V I ++ Y+KC YA VF
Sbjct: 497 YTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE 556
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
+RDL+ W S+I G +G E LF LL+ E ++ D VT + +LQA + G
Sbjct: 557 AATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREG 611
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 176/407 (43%), Gaps = 22/407 (5%)
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV--------EAINVFHEMIKMSVSPNVA 348
VT F RL +D V+ TG L V E NV + + SP
Sbjct: 3 VTGVSSAFGRLFKQDKTHKRVIGTG---TKLTVTRQILEHLEGGNVSKAVSVLFASPEPV 59
Query: 349 ---LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 405
L+ L + S + AR + +++ + + + N+ I Y KCG + AR +F
Sbjct: 60 SYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELF 119
Query: 406 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 465
M RD SW ++IT +G DE +FR + R+ +R + +L++ + L
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLR 179
Query: 466 AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA 525
++++HC + + + + S++ Y KC ++ AR +F ++ SWN ++ Y
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
Query: 526 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 585
G E + +F M N++P T +S++ ACS S +E G ++ ++ + ++V
Sbjct: 240 EMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADT 298
Query: 586 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 645
V + D+ + +L A + S L + SA Y + + A+++
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQT----RSKDLKSWTSAMSGYAMSGLTRE-ARELFD 353
Query: 646 LEP-RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
L P RN S+ + WDE + + +E+++ +L+
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR-QEIENIDNVTLV 399
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 304/606 (50%), Gaps = 10/606 (1%)
Query: 89 GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVS 148
G L AH FDE++ +D+V Y +I+ + G C A + + M L + T S
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYG--CSLRAIELYAEMVSCGLRESASTFPS 117
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
+L + +EG +H I GFG C+ + L+ +Y V +A +F +M
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFG-CNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
+ V N L+ + G++ FE++ +M V + LT I C+ + GK
Sbjct: 177 NLAV--CNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 269 IHGYMIRMGVE-PDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 326
+H +++ G ++ LVD YS D++ + + F + KD + +N +++
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 327 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY-ITRVEIA 385
++++++F +M P++ F++ ++ S DI+ + IH YVL+ + ++ + +
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
+ +I Y KC ++ + L++ + +L S++T +H G + I +F L+ E
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTG 414
Query: 446 IDSVTLISLLQALSQ--LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
ID VTL ++L+ALS L + VHC ++ + +++V+ SLI Y K G+ ++R
Sbjct: 415 IDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSR 474
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
+F ++ + +++ YA +G + +K+ M N+ PDE+T S+L+ CSHSG
Sbjct: 475 KVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG 534
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
LVEEG IF S+ +Y I PG Y C++DLL RAG + +A L+ A +L
Sbjct: 535 LVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSL 594
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
L +CR++ + IG A+ ++ LEP N + Y+ +S E G ++ IR + +EL
Sbjct: 595 LQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELM 654
Query: 684 STPGYS 689
GYS
Sbjct: 655 REIGYS 660
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 227/507 (44%), Gaps = 30/507 (5%)
Query: 59 GKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH 118
G +VH I L + FV S+L+ LY+ ++ A ++FDE+ +++L ++ +
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
+G S F + M+ + + N +T ++ + + EG+ +H ++ G+ + +
Sbjct: 191 TGES--KRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISN 248
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
L+D Y CG + + F + V SWN +++ G L++ +LF +M
Sbjct: 249 IFVANVLVDYYSACGDLSGSMRSFNAV--PEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACTALVDLYSKFD- 296
P + + + C+ + GK IH Y+++MG + + +AL+D+Y K +
Sbjct: 307 QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNG 366
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+ + +++ L + N +MT + + + I +F MI + ++ A
Sbjct: 367 IENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA 426
Query: 357 VSDLRDIRLARSIHGYVLRH------QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 410
+S + L S+H L H Y V ++ +I Y K G + +R VF+ + +
Sbjct: 427 LS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDT 482
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
++ TS+I GY +G + + + R + R NL D VT++S+L S G V+E
Sbjct: 483 PNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG---LVEEG 539
Query: 471 HCL------TYRAFHGKELSVNNSLITTYAKCGKLNMA-RYLFQQMTERCLTSWNAMLGA 523
+ Y G++L ++ + G + A R L Q + +W+++L +
Sbjct: 540 ELIFDSLESKYGISPGRKLYA--CMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQS 597
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDEL 550
+H N E + L N++P+
Sbjct: 598 CRIHRN--ETIGRRAAEVLMNLEPENF 622
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 151/324 (46%), Gaps = 1/324 (0%)
Query: 290 DLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 349
+L ++ A + F+ + +D V YN++++G + + AI ++ EM+ + + +
Sbjct: 55 ELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESAST 114
Query: 350 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 409
F +++S SD R +H V+ + + + + ++ YA + A +F+ M
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
R+L ++ + G ++ ++ E + + +T +++ S + K+
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 470 VHCLTYRA-FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 528
+H L ++ ++ + V N L+ Y+ CG L+ + F + E+ + SWN+++ A +G
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 529 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 588
+ + L LF+ M+ +P F S L CS + ++ G QI +++ V
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 589 NCIIDLLSRAGQLTEAYNLVKSMP 612
+ +ID+ + + + L +S+P
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLP 378
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
N+ I K G L A F+ M RD+V++ +I+G +G AI L+ + LR
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 446 IDSVTLISLLQALS-QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 504
+ T S+L S +L C + +VHC G + V ++L+ YA +++A
Sbjct: 110 ESASTFPSVLSVCSDELFCREGI-QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK 168
Query: 505 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
LF +M +R L N +L + G + +++ M+L + + LT+ ++ CSH L
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL 228
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
V EG Q+ +++ + N ++D S G L+ + ++P + +++
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE-KDVISWNSIV 287
Query: 625 SACRLYG 631
S C YG
Sbjct: 288 SVCADYG 294
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 227/398 (57%), Gaps = 1/398 (0%)
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
D+ ARK+F+ + ++ +N M+ G ++ + E +++F EM + SP+ ++ S
Sbjct: 40 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 99
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
+ LR + + + IHGY +++ + + + + H Y + G LQ +V M R+LV+
Sbjct: 100 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 159
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
W ++I G +G + + L+++++ R + +T +++L + S L +++H
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 535
+ ++V +SLI+ Y+KCG L A F + + W++M+ AY HG E ++
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 279
Query: 536 LFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
LFN M + N++ +E+ F ++L ACSHSGL ++GL++F M+ +Y PG HY C++DL
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 595 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 654
L RAG L +A +++SMP TLLSAC ++ + E+ + + K+IL+++P +S+ Y
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 399
Query: 655 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
VL++N+ A RW +V+ +R +DK +K G S E
Sbjct: 400 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 188/401 (46%), Gaps = 15/401 (3%)
Query: 154 AKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVG 213
+KLG A++G ++ + + L++ Y + G + A VF +M T
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNY-----MSSNILINGYVRAGDLVNARKVFDEMPDRKLT-- 57
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
+WN +IA + E LFR+M PD TL + A L + G+ IHGY
Sbjct: 58 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 117
Query: 274 IRMGVEPDMVACTALVDLYSKFDVTKARKMFER-LRNKDAVIYNVMMTGYLKNDLPVEAI 332
I+ G+E D+V ++L +Y + + ++ R + ++ V +N ++ G +N P E +
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP-ETV 176
Query: 333 NVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
++M+K+S PN F+ ++S+ SDL + IH ++ + V + + +I
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 236
Query: 392 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL-QRENLRIDSVT 450
Y+KCG L A F+ D V W+SMI+ Y HG DEAI LF + ++ N+ I+ V
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 451 LISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQM 509
++LL A S G E+ + + K L ++ + G L+ A + + M
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 510 TERC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 549
+ + W +L A +H N ++F ++ I P++
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFK--EILQIDPND 395
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+S S L D A +++G + + Y++ +N +I+ Y + G L AR VF+ M R L
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKL 56
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
+W +MI G + +E + LFR + D TL S+ + L +S +++H
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
T + +L VN+SL Y + GKL + + M R L +WN ++ A +G V
Sbjct: 117 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 176
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
L L+ MK+ +P+++TF ++L++CS + +G QI I+
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 220
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 172/377 (45%), Gaps = 25/377 (6%)
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA-----YAHSGGSCVYGAFRIASTMQ 135
LI Y G L +A +VFDE+ ++ L + ++I + G S FR M
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSL----FR---EMH 83
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
P+ TL S+ +A L S+ G+ IHGY I+ G + D + ++L MY + G +
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL-DLVVNSSLAHMYMRNGKL 142
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+ V M + +WN LI NG L++ M P+ +T +
Sbjct: 143 QDGEIVIRSMPVRNLV--AWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 200
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 314
SC++L G+ IH I++G + ++L+ +YSK + A K F ++D V+
Sbjct: 201 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 260
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAV--SDLRDIRLARSIHG 371
++ M++ Y + EAI +F+ M + + + N FLNL+ A S L+D L
Sbjct: 261 WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL-ELFDM 319
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHID 430
V ++ + ++ ++ + G L A + M + D+V W ++++ H + +
Sbjct: 320 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAE 379
Query: 431 EAIILFRLLQRENLRID 447
A +F +E L+ID
Sbjct: 380 MAQRVF----KEILQID 392
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 15/353 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L + ++ FS D + L + G+++H +IK L D V SSL
Sbjct: 74 EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLA 133
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPN 142
+Y GKL+D V + ++LVA+ ++I A +G C + M+ PN
Sbjct: 134 HMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG--CPETVLYLYKMMKISGCRPN 191
Query: 143 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
++T V++L + + L +G+ IH AI+ G ++L+ MY KCG + AA F
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA-SSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 203 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELD 261
+ + W+ +I+AY +GQ EA ELF M + + + + N + +C+
Sbjct: 251 SEREDEDEVM--WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG 308
Query: 262 YLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVIYNVM 318
G + M+ + G +P + T +VDL + + +A + + K D VI+ +
Sbjct: 309 LKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTL 368
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVA----LFLNLISAVSDLRDIRLAR 367
++ + A VF E+++ + PN + L N+ ++ RD+ R
Sbjct: 369 LSACNIHKNAEMAQRVFKEILQ--IDPNDSACYVLLANVHASAKRWRDVSEVR 419
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 218/400 (54%), Gaps = 10/400 (2%)
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+ A K+F + K+ V++ M+ GYL N V A F +S ++ L+ +IS
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD----LSPERDIVLWNTMISG 99
Query: 357 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 416
++ ++ ARS+ + ++ N ++ YA G ++ VF+ M R++ SW
Sbjct: 100 YIEMGNMLEARSLFDQMPCRDVMS----WNTVLEGYANIGDMEACERVFDDMPERNVFSW 155
Query: 417 TSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
+I GY +G + E + F R++ ++ + T+ +L A ++LG K VH
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 476 RAFHGK-ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 534
+ K +++V N+LI Y KCG + +A +F+ + R L SWN M+ A HG+ E L
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
LF+ MK I PD++TF +L AC H GLVE+GL F SM +++I+P H C++DL
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDL 335
Query: 595 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 654
LSRAG LT+A + MP + TLL A ++Y +IGE ++++KLEPRN +++
Sbjct: 336 LSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANF 395
Query: 655 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
V++SNI + GR+D+ A ++ +D K G S IE D
Sbjct: 396 VMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETD 435
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 24/342 (7%)
Query: 26 RRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLN-SDCFVGSSLIRL 84
RRY DL + + L + + G +E G + S+ + D ++++
Sbjct: 79 RRYFDLSPER--------DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEG 130
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG-SCVYGAFRIASTMQDQRLYPNR 143
Y+ G +E RVFD++ +++ ++ +I YA +G S V G+F+ + + + PN
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFK--RMVDEGSVVPND 188
Query: 144 VTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFG 203
T+ +L A AKLG+ G+ +H Y G+ D + L+DMY KCG +++A VF
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 204 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 263
+ SWN +I +G EA LF +M + + PD +T + +C + +
Sbjct: 249 GIKRRDLI--SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLV 306
Query: 264 CHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVIYNVMMT 320
G + M + P++ C +VDL S+ +T+A + ++ K DAVI+ ++
Sbjct: 307 EDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Query: 321 G---YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
Y K D+ A+ E+IK+ N A F+ L + D
Sbjct: 367 ASKVYKKVDIGEVAL---EELIKLE-PRNPANFVMLSNIYGD 404
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 160/349 (45%), Gaps = 22/349 (6%)
Query: 89 GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNR--VTL 146
G + A++VF E+ K++V +TS+I Y + + S + L P R V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNK--------DLVSARRYFDLSPERDIVLW 93
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
+++ ++G++ E R++ R D + T+L+ Y G ++ VF M
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCR-----DVMSWNTVLEGYANIGDMEACERVFDDM- 147
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDYLCH 265
V SWN LI Y NG+ E F++M+ V+P+ T+ + +CA+L
Sbjct: 148 -PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 266 GKSIHGYMIRMGVEP-DMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYL 323
GK +H Y +G D+ AL+D+Y K + A ++F+ ++ +D + +N M+ G
Sbjct: 207 GKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS-IHGYVLRHQYITRV 382
+ EA+N+FHEM +SP+ F+ ++ A + + + + + +
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEI 326
Query: 383 EIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHID 430
E ++ ++ G+L A N+M + D V W +++ + +D
Sbjct: 327 EHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVD 375
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 56/324 (17%)
Query: 357 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC--GYLQYARLVFNRMRSRDLV 414
++ LRD L + ++ H + E NQ+ C G + A VF M +++V
Sbjct: 2 ITSLRDSSLLVAESRELITHAKCS-TESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVV 60
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 474
WTSMI GY+ + + A F L ++ + + + ++ + L S ++ C
Sbjct: 61 LWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPC-- 118
Query: 475 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 534
+++ N+++ YA G + +F M ER + SWN ++ YA +G +EVL
Sbjct: 119 ------RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVL 172
Query: 535 KLFNHM-KLGNIKPDELTFTSILTACS--------------------------------- 560
F M G++ P++ T T +L+AC+
Sbjct: 173 GSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALID 232
Query: 561 ---HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 617
G +E +++F+ + R I +N +I+ L+ G TEA NL M ++ S
Sbjct: 233 MYGKCGAIEIAMEVFKGIKRRDLI-----SWNTMINGLAAHGHGTEALNLFHEMKNSGIS 287
Query: 618 AALCT---LLSACRLYGDTEIGEA 638
T +L AC+ G E G A
Sbjct: 288 PDKVTFVGVLCACKHMGLVEDGLA 311
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 253/481 (52%), Gaps = 55/481 (11%)
Query: 268 SIHGYMIRMGVEPDMVACTALV------DLYSKFDVTKARKMFERLRNKDAVIYNVMMTG 321
IH I+ G D +A ++ DL+ + D+ A K+F ++ ++ +N ++ G
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR-DLDYAHKIFNQMPQRNCFSWNTIIRG 99
Query: 322 YLKND--LPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
+ ++D + AI +F+EM+ V PN F +++ A + I+ + IHG L++ +
Sbjct: 100 FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 379 ITRVEIANQIIHTYAKCGYLQ--------------------------------------- 399
+ + ++ Y CG+++
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 400 ------YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 453
AR++F++MR R +VSW +MI+GY +G +A+ +FR +++ ++R + VTL+S
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
+L A+S+LG L + +H + + + ++LI Y+KCG + A ++F+++
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
+ +W+AM+ +A+HG + + F M+ ++P ++ + ++LTACSH GLVEEG + F
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 633
M+ + P HY C++DLL R+G L EA + +MP LL ACR+ G+
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 634 EIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
E+G+ +A ++ + P +S +YV +SN+ A G W EV+ +R K+K+++ PG SLI++
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
Query: 694 D 694
D
Sbjct: 520 D 520
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 207/461 (44%), Gaps = 53/461 (11%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYS----EYGKLEDAHRVFDEITNKDLVAYTSIITAY 116
++H IK D + ++R + + L+ AH++F+++ ++ ++ +II +
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 117 AHSGGSCVYGAFRIA-STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG 175
+ S A + M D+ + PNR T S+L A AK G +QEG+ IHG A++ GFG
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 176 VCDEIFETTLLDMYHKCGGVKMAAAVF--------------------------------- 202
DE + L+ MY CG +K A +F
Sbjct: 161 -GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 203 --GKMNAT--------STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
G A +V SWN +I+ Y NG +A E+FR+M + P+ +TL +
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD 311
+ + + L L G+ +H Y G+ D V +AL+D+YSK + KA +FERL ++
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
+ ++ M+ G+ + +AI+ F +M + V P+ ++NL++A S + R
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 372 YVLRHQYI-TRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHI 429
++ + R+E ++ + G L A + N D V W +++ G++
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
+ + +L + + DS ++L + G S V E+
Sbjct: 460 EMGKRVANILM-DMVPHDSGAYVALSNMYASQGNWSEVSEM 499
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 164/408 (40%), Gaps = 95/408 (23%)
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY----LQYARLVFNRM 408
L +++ R IR IH ++ + A +I+ A L YA +FN+M
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 409 RSRDLVSWTSMITGYVHHGHIDEAII----LFRLLQRENLRIDSVTLISLLQALSQLGCL 464
R+ SW ++I G+ D+A+I + ++ E + + T S+L+A ++ G +
Sbjct: 86 PQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 465 SAVKEVHCLTYR-AFHGKELSVNNSLITTYAKCGKLNM---------------------- 501
K++H L + F G E ++N L+ Y CG +
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSN-LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 502 -----------------------ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 538
AR LF +M +R + SWN M+ Y+++G + + +++F
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 539 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
MK G+I+P+ +T S+L A S G +E G + + I +V + +ID+ S+
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 599 GQLTEAYNLVKSMPSTH----------------------------------SSAALCTLL 624
G + +A ++ + +P + S A LL
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 625 SACRLYGDTEIGEAIAKQILK---LEPRNSSSYVLISNILAEGGRWDE 669
+AC G E G Q++ LEPR Y + ++L G DE
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPR-IEHYGCMVDLLGRSGLLDE 429
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+ + + + ++K + + L + LG LE G+ +H+ + + D +GS+
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
LI +YS+ G +E A VF+ + ++++ ++++I +A G + A M+ +
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAG--DAIDCFCKMRQAGVR 372
Query: 141 PNRVTLVSLLHAAAKLGSLQEGR 163
P+ V ++LL A + G ++EGR
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGR 395
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 282/576 (48%), Gaps = 7/576 (1%)
Query: 129 RIASTMQDQRLYPNRVT-LVSLLHAAAKLGSLQEGRAIHGYAI--RRGFGVCDEIFETTL 185
++AS + + P + L LL A L+ G +IH + I + D +L
Sbjct: 16 KLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSL 75
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVL 244
+++Y KC A +F M V SW ++ Y ++G E +LF+ M +
Sbjct: 76 INLYVKCRETVRARKLFDLM--PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESR 133
Query: 245 PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKM 303
P+ SC+ + GK HG ++ G+ LV +YS +A ++
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
+ L D +++ ++GYL+ E ++V + N +L+ + S+LRD+
Sbjct: 194 LDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDL 253
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 423
LA +H ++R + VE +I+ Y KCG + YA+ VF+ ++++ T+++ Y
Sbjct: 254 NLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAY 313
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL 483
+EA+ LF + + + + T LL ++++L L +H L ++ + +
Sbjct: 314 FQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHV 373
Query: 484 SVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
V N+L+ YAK G + AR F MT R + +WN M+ + HG E L+ F+ M
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
P+ +TF +L ACSH G VE+GL F +++++ + P HY CI+ LLS+AG +
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493
Query: 604 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAE 663
A + +++ P A TLL+AC + + +G+ +A+ ++ P +S YVL+SNI A+
Sbjct: 494 AEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAK 553
Query: 664 GGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
W+ VA +R++ ++ +K PG S I + Q V
Sbjct: 554 SREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHV 589
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 212/436 (48%), Gaps = 12/436 (2%)
Query: 32 KNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNS---DCFVGSSLIRLYSEY 88
K + F +D + LK C L G+ +H I N +S D + +SLI LY +
Sbjct: 25 KKTPFPID--RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKC 82
Query: 89 GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSC-VYGAFRIASTMQDQRLYPNRVTLV 147
+ A ++FD + +++V++ +++ Y +SG V F+ + R PN
Sbjct: 83 RETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESR--PNEFVAT 140
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 207
+ + + G ++EG+ HG ++ G + E TL+ MY C G A V +
Sbjct: 141 VVFKSCSNSGRIEEGKQFHGCFLKYGL-ISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY 199
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
+V S ++ YL G E ++ R+ + + + LT +++ + L L
Sbjct: 200 CDLSVFS--SALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 326
+H M+R G ++ AC AL+++Y K V A+++F+ ++ + +M Y ++
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 327 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 386
EA+N+F +M V PN F L++++++L ++ +HG VL+ Y V + N
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 387 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 446
+++ YAK G ++ AR F+ M RD+V+W +MI+G HHG EA+ F +
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 447 DSVTLISLLQALSQLG 462
+ +T I +LQA S +G
Sbjct: 438 NRITFIGVLQACSHIG 453
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 181/387 (46%), Gaps = 18/387 (4%)
Query: 44 TLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITN 103
T+ KSC GR+E GK+ H +K L S FV ++L+ +YS +A RV D++
Sbjct: 140 TVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY 199
Query: 104 KDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGR 163
DL ++S ++ Y G + ++ N +T +S L + L L
Sbjct: 200 CDLSVFSSALSGYLECGA--FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 164 AIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 223
+H +R GF E L++MY KCG V A VF +A + + + ++ AY
Sbjct: 258 QVHSRMVRFGFNAEVEAC-GALINMYGKCGKVLYAQRVFDDTHAQNIFLNT--TIMDAYF 314
Query: 224 HNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV 283
+ EA LF +M ++V P+ T A + S AEL L G +HG +++ G ++
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM 374
Query: 284 ACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
ALV++Y+K + ARK F + +D V +N M++G + L EA+ F MI
Sbjct: 375 VGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG 434
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
PN F+ ++ A S + + + +H + +Q + + ++ I H G L A
Sbjct: 435 EIPNRITFIGVLQACSHIGFVE--QGLHYF---NQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 403 LVFNR---MRSR----DLVSWTSMITG 422
+ + MR+ D+V+W +++
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 19 RHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVG 78
+ + E L + + + + + L S L L+ G +H +K + VG
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVG 376
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAF-RIASTMQD 136
++L+ +Y++ G +EDA + F +T +D+V + ++I+ +H G G AF R+ T +
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE- 435
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGY-AIRRGFGVCDEIFE-TTLLDMYHKCGG 194
PNR+T + +L A + +G +++G +H + + + F V +I T ++ + K G
Sbjct: 436 ---IPNRITFIGVLQACSHIGFVEQG--LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAA 221
K A F + V +W L+ A
Sbjct: 491 FK-DAEDFMRTAPIEWDVVAWRTLLNA 516
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 236/474 (49%), Gaps = 75/474 (15%)
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
NG +AF L+ Q++ ++ P+ T ++ + SC+ GK IH ++++ G+ D
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYV 163
Query: 285 CTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 344
T LVD+ Y K V A VF M + S+
Sbjct: 164 ATGLVDV------------------------------YAKGGDVVSAQKVFDRMPERSLV 193
Query: 345 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 404
+ A+ I YAK G ++ AR +
Sbjct: 194 SSTAM---------------------------------------ITCYAKQGNVEAARAL 214
Query: 405 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGC 463
F+ M RD+VSW MI GY HG ++A++LF +LL + D +T+++ L A SQ+G
Sbjct: 215 FDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGA 274
Query: 464 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
L + +H + + V LI Y+KCG L A +F + + +WNAM+
Sbjct: 275 LETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAG 334
Query: 524 YAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
YAMHG + L+LFN M+ + ++P ++TF L AC+H+GLV EG++IF SM +EY I
Sbjct: 335 YAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIK 394
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 642
P HY C++ LL RAGQL AY +K+M S ++L +C+L+GD +G+ IA+
Sbjct: 395 PKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEY 454
Query: 643 ILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
++ L +NS YVL+SNI A G ++ VA +R + K+K + PG S IE++ +
Sbjct: 455 LIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENK 508
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 188/407 (46%), Gaps = 61/407 (14%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
Y+ L +S+ + + + LKSC + GK +H +K L D +V + L+ +Y++
Sbjct: 118 YVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAK 173
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-------------------------GS 122
G + A +VFD + + LV+ T++IT YA G G
Sbjct: 174 GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGY 233
Query: 123 CVYGAFRIASTMQDQRLY------PNRVTLVSLLHAAAKLGSLQEGRAIHGYA----IRR 172
+G F + M Q+L P+ +T+V+ L A +++G+L+ GR IH + IR
Sbjct: 234 AQHG-FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 173 GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF 232
VC T L+DMY KCG ++ A VF + + +WN +IA Y +G + +A
Sbjct: 293 NVKVC-----TGLIDMYSKCGSLEEAVLVFN--DTPRKDIVAWNAMIAGYAMHGYSQDAL 345
Query: 233 ELFRQMIHRKVL-PDLLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVD 290
LF +M L P +T + +CA + G I M + G++P + LV
Sbjct: 346 RLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVS 405
Query: 291 LYSKFDVTKARKMFERLRN----KDAVIY-NVMMTGYLKNDLPVEAINVFHEMIKMSV-- 343
L + + ++ +E ++N D+V++ +V+ + L D V + +I +++
Sbjct: 406 LLGR--AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF-VLGKEIAEYLIGLNIKN 462
Query: 344 SPNVALFLNLISAVSDLRDIRLARSI--HGYVLRHQYITRVEIANQI 388
S L N+ ++V D + R++ +++ I+ +EI N++
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKV 509
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 171/385 (44%), Gaps = 49/385 (12%)
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
L R Y+ +GK+ + +F + + DL +T+ I + +G AF + + +
Sbjct: 70 LHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASING--LKDQAFLLYVQLLSSEIN 127
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
PN T SLL + S + G+ IH + ++ G G+ D T L+D+Y K G V A
Sbjct: 128 PNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQK 182
Query: 201 VFGKMNATSTT-----------------------------VGSWNPLIAAYLHNGQALEA 231
VF +M S + SWN +I Y +G +A
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 232 FELFRQMIHR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 290
LF++++ K PD +T+ A+ +C+++ L G+ IH ++ + ++ CT L+D
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 291 LYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVA 348
+YSK + +A +F KD V +N M+ GY + +A+ +F+EM ++ + P
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 349 LFLNLISAVSDL----RDIRLARSI-HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
F+ + A + IR+ S+ Y ++ ++E ++ + G L+ A
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIK----PKIEHYGCLVSLLGRAGQLKRAYE 418
Query: 404 VFNRMR-SRDLVSWTSMITGYVHHG 427
M D V W+S++ HG
Sbjct: 419 TIKNMNMDADSVLWSSVLGSCKLHG 443
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 250/439 (56%), Gaps = 10/439 (2%)
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLR 308
A+ + +C L + HG +H + + ++ + LV LY+ + A ++F+R+
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 309 NKDA--VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 366
+D+ +N +++GY + +A+ ++ +M + V P+ F ++ A + +++
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 367 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
+IH +++ + V + N ++ YAKCG + AR VF+ + +D VSW SM+TGY+HH
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 486
G + EA+ +FRL+ + + D V + S+ L+++ +++H R ELSV
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSV---LARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
N+LI Y+K G+L A ++F QM ER SWNA++ A++ + N LK F M N K
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAK 388
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
PD +TF S+L+ C+++G+VE+G ++F M +EY I P HY C+++L RAG + EAY+
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 607 L-VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 665
+ V+ M LL AC L+G+T+IGE A+++ +LEP N ++ L+ I ++
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 666 RWDEVAHIRAMTKDKELKS 684
R ++V +R M D+ L++
Sbjct: 509 RAEDVERVRQMMVDRGLET 527
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 194/392 (49%), Gaps = 19/392 (4%)
Query: 146 LVSLLHAAAKLGSLQEGRAIH----GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
SLL L ++ G +H Y +R G+ + L+ +Y CG ++A V
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS-----SKLVRLYASCGYAEVAHEV 149
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F +M+ ++ +WN LI+ Y GQ +A L+ QM V PD T + +C +
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG 209
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMT 320
+ G++IH +++ G D+ ALV +Y+K D+ KAR +F+ + +KD V +N M+T
Sbjct: 210 SVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLT 269
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
GYL + L EA+++F M++ + P+ ++++ V + R +HG+V+R
Sbjct: 270 GYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEW 326
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 440
+ +AN +I Y+K G L A +F++M RD VSW ++I+ H + F +
Sbjct: 327 ELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMH 383
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKCGKL 499
R N + D +T +S+L + G + + + L + + ++ ++ Y + G +
Sbjct: 384 RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMM 443
Query: 500 NMA-RYLFQQMT-ERCLTSWNAMLGAYAMHGN 529
A + Q+M E T W A+L A +HGN
Sbjct: 444 EEAYSMIVQEMGLEAGPTVWGALLYACYLHGN 475
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 165/312 (52%), Gaps = 14/312 (4%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD- 105
L++C +L ++ G RVH L ++ + S L+RLY+ G E AH VFD ++ +D
Sbjct: 99 LETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDS 158
Query: 106 -LVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
A+ S+I+ YA G A + M + + P+R T +L A +GS+Q G A
Sbjct: 159 SPFAWNSLISGYAELGQ--YEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 224
IH ++ GFG D L+ MY KCG + A VF + SWN ++ YLH
Sbjct: 217 IHRDLVKEGFGY-DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYV--SWNSMLTGYLH 273
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
+G EA ++FR M+ + PD + +++ + A + HG+ +HG++IR G+E ++
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 285 CTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
AL+ LYSK + +A +F+++ +D V +N +++ + KN + F +M + +
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANA 387
Query: 344 SPNVALFLNLIS 355
P+ F++++S
Sbjct: 388 KPDGITFVSVLS 399
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 12/261 (4%)
Query: 349 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 408
+F +L+ LR I +H + + + I+++++ YA CGY + A VF+RM
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 409 RSRD--LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 466
RD +W S+I+GY G ++A+ L+ + + ++ D T +L+A +G +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 526
+ +H + G ++ V N+L+ YAKCG + AR +F + + SWN+ML Y
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILT---ACSHSGLVEEGLQIFRSMIREYTIVP 583
HG E L +F M I+PD++ +S+L + H G G I R M E ++
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH-GRQLHGWVIRRGMEWELSVA- 331
Query: 584 GEVHYNCIIDLLSRAGQLTEA 604
N +I L S+ GQL +A
Sbjct: 332 -----NALIVLYSKRGQLGQA 347
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 12/276 (4%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
Y + + Y + D LK+C +G ++ G+ +H D +K D +V +
Sbjct: 175 QYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLN 234
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRL 139
+L+ +Y++ G + A VFD I +KD V++ S++T Y H G ++ A I M +
Sbjct: 235 ALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG--LLHEALDIFRLMVQNGI 292
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 199
P++V + S+L A++ S + GR +HG+ IRRG + L+ +Y K G + A
Sbjct: 293 EPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGME-WELSVANALIVLYSKRGQLGQAC 348
Query: 200 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
+F +M T SWN +I+A+ N L+ FE QM PD +T + + CA
Sbjct: 349 FIFDQMLERDTV--SWNAIISAHSKNSNGLKYFE---QMHRANAKPDGITFVSVLSLCAN 403
Query: 260 LDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 294
+ G+ + M + G++P M +V+LY +
Sbjct: 404 TGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 284/608 (46%), Gaps = 81/608 (13%)
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
LE+A ++FDE+ ++D ++ ++I+ YA + RI + P R ++
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKNR--------RIGEALLLFEKMPERN---AVS 169
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK----MN 206
+A G Q G + R V D L+ K + AA V G+ ++
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS 229
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
V ++N LI Y GQ A LF Q +PDL C +
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQ------IPDL---------CGD------- 267
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
HG R ++V+ +++ Y K DV AR +F++++++D + +N M+ GY+
Sbjct: 268 --DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHV 325
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
+A +F EM PN R H +
Sbjct: 326 SRMEDAFALFSEM------PN--------------------RDAHSW------------- 346
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
N ++ YA G ++ AR F + + VSW S+I Y + EA+ LF + E +
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
D TL SLL A + L L ++H + + ++ V+N+LIT Y++CG++ +R +
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRI 465
Query: 506 FQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
F +M +R + +WNAM+G YA HGN +E L LF MK I P +TF S+L AC+H+GL
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGL 525
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
V+E F SM+ Y I P HY+ ++++ S GQ EA ++ SMP LL
Sbjct: 526 VDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALL 585
Query: 625 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 684
ACR+Y + + A+ + +LEP +S+ YVL+ N+ A+ G WDE + +R + K +K
Sbjct: 586 DACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKK 645
Query: 685 TPGYSLIE 692
G S ++
Sbjct: 646 ERGSSWVD 653
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 37/338 (10%)
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+ +AR +FE+L ++ V +N M++GY+K +A +F M K V + +S
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSC 115
Query: 357 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 416
+R + AR + + + N +I YAK + A L+F +M R+ VSW
Sbjct: 116 -GGIRFLEEARKLFDEMPSRDSFS----WNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 417 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 476
++MITG+ +G +D A++LFR + + DS L +L+ L + LS V
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 477 AFHGKE--LSVNNSLITTYAKCGKLNMARYLFQQMTERC---------------LTSWNA 519
G+E + N+LI Y + G++ AR LF Q+ + C + SWN+
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 520 MLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 579
M+ AY G+ LF+ MK D +++ +++ H +E+ +F M
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR- 341
Query: 580 TIVPGEVH-YNCIIDLLSRAGQLTEAYNLVKSMPSTHS 616
+ H +N ++ + G + A + + P H+
Sbjct: 342 -----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
N+ ++ + GY+ AR +F ++ +R+ V+W +MI+GYV +++A LF ++ +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR--- 100
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
D VT +++ G + ++E L + ++ N++I+ YAK ++ A L
Sbjct: 101 -DVVTWNTMISGYVSCGGIRFLEEARKL-FDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 506 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
F++M ER SW+AM+ + +G + LF M + + P
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 12/235 (5%)
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
N D + ++ Y+ G +E A F++ K V++ SII AY + I
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
++ ++ P+ TL SLL A+ L +L+ G +H ++ + D L+ MY +
Sbjct: 400 MNIEGEK--PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPDVPVHNALITMYSR 455
Query: 192 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
CG + + +F +M + +WN +I Y +G A EA LF M + P +T
Sbjct: 456 CGEIMESRRIFDEMKLKREVI-TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFV 514
Query: 252 NAILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKFDVTKARKMFE 305
+ + +CA + K+ M+ + +EP M ++LV +VT + FE
Sbjct: 515 SVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLV------NVTSGQGQFE 563
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 258/477 (54%), Gaps = 19/477 (3%)
Query: 225 NGQALEAFELFRQMIHRKVLPDLL--TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 282
+G + LF Q IHR PDL T + +C+ L Y G+ +H MI+ G E
Sbjct: 62 SGNPNDTLALFLQ-IHRAS-PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGT 119
Query: 283 VACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
++ TAL+D+YSK+ + + ++FE + KD V +N +++G+L+N EA+ VF M +
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
V + +++ + L+ ++ + +H V+ V + +I Y+ G + A
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEA 238
Query: 402 RLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
V+N + D V S+I+G + + + EA +L QR N+R+ L S L S
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR-QRPNVRV----LSSSLAGCSD 293
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 520
L K++HC+ R + + N L+ Y KCG++ AR +F+ + + + SW +M
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSM 353
Query: 521 LGAYAMHGNYAEVLKLFNHM--KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 578
+ AYA++G+ + L++F M + + P+ +TF +++AC+H+GLV+EG + F M +
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Query: 579 YTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL----LSACRLYGDTE 634
Y +VPG HY C ID+LS+AG+ E + LV+ M + + C + LSAC L D
Sbjct: 414 YRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLT 473
Query: 635 IGEAIAKQIL-KLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSL 690
GE +A++++ + P N+S YVL+SN A G+WD V +R K+K L T G+SL
Sbjct: 474 RGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 217/448 (48%), Gaps = 29/448 (6%)
Query: 94 AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRV--TLVSLLH 151
A +FDE+ +DL + S ++++ SG +A +Q R P+ T +L
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNP----NDTLALFLQIHRASPDLSSHTFTPVLG 92
Query: 152 AAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
A + L + GR +H I++G I +T L+DMY K G + + VF +
Sbjct: 93 ACSLLSYPETGRQVHALMIKQG-AETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLV 151
Query: 212 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
SWN L++ +L NG+ EA +F M +V TL++ + +CA L L GK +H
Sbjct: 152 --SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHA 209
Query: 272 YMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NKDAVIYNVMMTGYLKNDLPV 329
++ G + +V TA++ YS + +A K++ L + D V+ N +++G ++N
Sbjct: 210 MVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYK 268
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 389
EA ++ PNV + + ++ SD D+ + + IH LR+ +++ ++ N ++
Sbjct: 269 EAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLM 323
Query: 390 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI--D 447
Y KCG + AR +F + S+ +VSWTSMI Y +G +A+ +FR + E + +
Sbjct: 324 DMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPN 383
Query: 448 SVTLISLLQALSQLGCLSAVKEVHCL---TYRAFHGKELSVNNSLITTYAKCGKLNMARY 504
SVT + ++ A + G + KE + YR G E V I +K G+
Sbjct: 384 SVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV--CFIDILSKAGETEEIWR 441
Query: 505 LFQQMTERCLTS-----WNAMLGAYAMH 527
L ++M E S W A+L A +++
Sbjct: 442 LVERMMENDNQSIPCAIWVAVLSACSLN 469
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 16/366 (4%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
R + + L +L + + L T L +C L E G++VH IK +
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQ 135
++LI +YS+YG L D+ RVF+ + KDLV++ ++++ + +G G G F + M
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVF---AAMY 177
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
+R+ + TL S++ A L LQ+G+ +H + G + + T ++ Y G +
Sbjct: 178 RERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV--VLGTAMISFYSSVGLI 235
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
A V+ +N + V N LI+ + N EAF ++ + P++ L++++
Sbjct: 236 NEAMKVYNSLNVHTDEV-MLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLA 289
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 314
C++ L GK IH +R G D C L+D+Y K + +AR +F + +K V
Sbjct: 290 GCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVS 349
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIK--MSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
+ M+ Y N V+A+ +F EM + V PN FL +ISA + ++ + G
Sbjct: 350 WTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFG- 408
Query: 373 VLRHQY 378
+++ +Y
Sbjct: 409 MMKEKY 414
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 189/398 (47%), Gaps = 21/398 (5%)
Query: 298 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
T A +F+ L +D N ++ +L++ P + + +F ++ + S + F ++ A
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
S L R +H +++ T +I Y+K G+L + VF + +DLVSW
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
++++G++ +G EA+ +F + RE + I TL S+++ + L L K+VH +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV--V 212
Query: 478 FHGKELSV-NNSLITTYAKCGKLNMARYLFQQM---TERCLTSWNAMLGAYAMHGNYAEV 533
G++L V ++I+ Y+ G +N A ++ + T+ + N+++ + NY E
Sbjct: 213 VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML--NSLISGCIRNRNYKEA 270
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
L + +P+ +S L CS + + G QI +R + ++ N ++D
Sbjct: 271 FLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL-CNGLMD 324
Query: 594 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT----EIGEAIAKQILKLEPR 649
+ + GQ+ +A + +++PS S + +++ A + GD EI + ++ + P
Sbjct: 325 MYGKCGQIVQARTIFRAIPS-KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP- 382
Query: 650 NSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPG 687
NS +++++ + A G E M K+K + PG
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEK-YRLVPG 419
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 181/645 (28%), Positives = 315/645 (48%), Gaps = 72/645 (11%)
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY---------------------AH 118
++I Y+E GK+ A +VFDE+ + +Y ++ITA A
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAK----LGSLQEGRAIHGYAIRRGF 174
S + + G R + + LY T V + A G L+ G+ + +G
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAE--TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 175 GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 234
V + + ++++ Y K G + A ++F +M T V +W +I Y G + F L
Sbjct: 204 AVKEVVSCSSMVHGYCKMGRIVDARSLFDRM--TERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 235 FRQMIHR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS 293
F +M V + TLA +C + G IHG + RM +E D+ +L+ +YS
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 294 KFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
K + +A+ +F ++NKD+V +N ++TG ++ EA +F +M ++ + +
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTD 377
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 412
+I S +I +KC L F M +D
Sbjct: 378 MIKGFSGKGEI-----------------------------SKCVEL------FGMMPEKD 402
Query: 413 LVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
++WT+MI+ +V +G+ +EA+ F ++LQ+E + +S T S+L A + L L ++H
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKE-VCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 531
+ +LSV NSL++ Y KCG N A +F ++E + S+N M+ Y+ +G
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGK 521
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
+ LKLF+ ++ +P+ +TF ++L+AC H G V+ G + F+SM Y I PG HY C+
Sbjct: 522 KALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACM 581
Query: 592 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 651
+DLL R+G L +A NL+ +MP S +LLSA + + ++ E AK++++LEP ++
Sbjct: 582 VDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSA 641
Query: 652 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+ YV++S + + G+ + I + K K +K PG S I L +
Sbjct: 642 TPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGE 686
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 201/438 (45%), Gaps = 49/438 (11%)
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F + TST + N I+ + NG EA +FRQM +R + ++ I + AE
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSI----VSWIAMISAYAENG 95
Query: 262 YLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMT 320
+ + M +R+ + + TA++ +K D+ KA ++F + K+AV Y M+T
Sbjct: 96 KMSKAWQVFDEMPVRVTTSYNAM-ITAMIK--NKCDLGKAYELFCDIPEKNAVSYATMIT 152
Query: 321 GYLKNDLPVEAINVFHEM---IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
G+++ EA ++ E + SV+ NV L+S LR + ++ V +
Sbjct: 153 GFVRAGRFDEAEFLYAETPVKFRDSVASNV-----LLSGY--LRAGKWNEAVR--VFQGM 203
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF- 436
+ V + ++H Y K G + AR +F+RM R++++WT+MI GY G ++ LF
Sbjct: 204 AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 437 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 496
R+ Q +++++S TL + +A ++H L R +L + NSL++ Y+K
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL 323
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM---------------- 540
G + A+ +F M + SWN+++ +E +LF M
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFS 383
Query: 541 ---------KLGNIKP--DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
+L + P D +T+T++++A +G EE L F M+++ + P ++
Sbjct: 384 GKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK-EVCPNSYTFS 442
Query: 590 CIIDLLSRAGQLTEAYNL 607
++ + L E +
Sbjct: 443 SVLSATASLADLIEGLQI 460
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 50/333 (15%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
+R+ D+K ++ + + + K+C R G ++H ++ L D F+G+SL+ +
Sbjct: 265 MRQEGDVK-----VNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSM 319
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRV 144
YS+ G + +A VF + NKD V++ S+IT
Sbjct: 320 YSKLGYMGEAKAVFGVMKNKDSVSWNSLIT------------------------------ 349
Query: 145 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 204
G +Q + Y + D + T ++ + G + +FG
Sbjct: 350 ------------GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 205 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 264
M +W +I+A++ NG EA F +M+ ++V P+ T ++ + + A L L
Sbjct: 398 MPEKDNI--TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYL 323
G IHG +++M + D+ +LV +Y K + A K+F + + V YN M++GY
Sbjct: 456 EGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYS 515
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
N +A+ +F + PN FL L+SA
Sbjct: 516 YNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
+Y E L + + + + + L + +L L G ++H +K+N+ +D V +
Sbjct: 418 YYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQN 477
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG--AFRIASTMQDQ 137
SL+ +Y + G DA+++F I+ ++V+Y ++I+ Y+++G +G A ++ S ++
Sbjct: 478 SLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG----FGKKALKLFSMLESS 533
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEG 162
PN VT ++LL A +G + G
Sbjct: 534 GKEPNGVTFLALLSACVHVGYVDLG 558
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 240/448 (53%), Gaps = 20/448 (4%)
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS---KFDVTKARKMFERLRNKDAV 313
C+ + +L IHG + ++ D + LV + S D+ AR + +
Sbjct: 23 CSSIKHLLQ---IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPS 79
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+N++ GY +D PVE+I V+ EM + + PN F L+ A + + R I V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
L+H + V + N +IH Y C AR VF+ M R++VSW S++T V +G ++
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN----NSL 489
F + + D T++ LL A G LS K VH +EL +N +L
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMV----RELELNCRLGTAL 253
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPD 548
+ YAK G L AR +F++M ++ + +W+AM+ A +G E L+LF+ M K +++P+
Sbjct: 254 VDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 549 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 608
+TF +L ACSH+GLV++G + F M + + I P +HY ++D+L RAG+L EAY+ +
Sbjct: 314 YVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFI 373
Query: 609 KSMPSTHSSAALCTLLSACRLYGDTE---IGEAIAKQILKLEPRNSSSYVLISNILAEGG 665
K MP + TLLSAC ++ D + IGE + K++++LEP+ S + V+++N AE
Sbjct: 374 KKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
Query: 666 RWDEVAHIRAMTKDKELKSTPGYSLIEL 693
W E A +R + K+ ++K G S +EL
Sbjct: 434 MWAEAAEVRRVMKETKMKKIAGESCLEL 461
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 161/334 (48%), Gaps = 20/334 (5%)
Query: 205 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 264
++++ +T +WN L Y + +E+ ++ +M R + P+ LT + +CA L
Sbjct: 71 LHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYL 323
G+ I +++ G + D+ L+ LY T ARK+F+ + ++ V +N +MT +
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
+N F EMI P+ + L+SA ++ L + +H V+ +
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCR 248
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRE 442
+ ++ YAK G L+YARLVF RM +++ +W++MI G +G +EA+ LF ++++
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 443 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE--------LSVNNSLITTYA 494
++R + VT + +L A S G + Y+ FH E + +++
Sbjct: 309 SVRPNYVTFLGVLCACSHTGLVDD-------GYKYFHEMEKIHKIKPMMIHYGAMVDILG 361
Query: 495 KCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMH 527
+ G+LN A ++M E W +L A ++H
Sbjct: 362 RAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 192/421 (45%), Gaps = 28/421 (6%)
Query: 47 LKSCVALGRL-EFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD 105
LK C ++ L + ++H+ S L +D F+ S L+R+ S + A + + D
Sbjct: 20 LKLCSSIKHLLQIHGQIHLSS----LQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSD 75
Query: 106 LVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
T + + +S + + S M+ + + PN++T LL A A L GR I
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 166 HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
++ GF D L+ +Y C A VF +M T V SWN ++ A + N
Sbjct: 136 QVEVLKHGFDF-DVYVGNNLIHLYGTCKKTSDARKVFDEM--TERNVVSWNSIMTALVEN 192
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
G+ FE F +MI ++ PD T+ + +C L GK +H ++ +E +
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLG 250
Query: 286 TALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK-MSV 343
TALVD+Y+K + AR +FER+ +K+ ++ M+ G + EA+ +F +M+K SV
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA------KCGY 397
PN FL ++ A S + GY H+ +I +IH A + G
Sbjct: 311 RPNYVTFLGVLCACSHTGLVD-----DGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGR 365
Query: 398 LQYARLVFNRMR-SRDLVSWTSMITG-YVHHGHIDEAI---ILFRLLQRENLRIDSVTLI 452
L A +M D V W ++++ +HH DE I + RL++ E R ++ ++
Sbjct: 366 LNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIV 425
Query: 453 S 453
+
Sbjct: 426 A 426
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 152/305 (49%), Gaps = 18/305 (5%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y E+ RR +K +K + LK+C + L G+++ V+ +K + D +VG++
Sbjct: 101 YSEMKRR--GIKPNKLTF-----PFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNN 153
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
LI LY K DA +VFDE+T +++V++ SI+TA +G + F M +R
Sbjct: 154 LIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL--VFECFCEMIGKRFC 211
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ T+V LL A G+L G+ +H + R + + T L+DMY K GG++ A
Sbjct: 212 PDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRL-GTALVDMYAKSGGLEYARL 268
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAE 259
VF +M V +W+ +I G A EA +LF +M+ V P+ +T + +C+
Sbjct: 269 VFERM--VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 260 LDYLCHG-KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NKDAVIYN 316
+ G K H ++P M+ A+VD+ + + +A +++ DAV++
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 317 VMMTG 321
+++
Sbjct: 387 TLLSA 391
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 244/488 (50%), Gaps = 41/488 (8%)
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK---ARKMFE 305
+L + + C L+ + K IHG+++R G++ T L+ +K V AR++ E
Sbjct: 51 SLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
++ ++ ++ ++ GY EAI ++ M K ++P F L+ A ++D+ L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT-------- 417
R H R + V + N +I Y KC + AR VF+ M RD++SWT
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 418 -----------------------SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISL 454
+M+TG+ + EA+ F +++ +R D VT+
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 455 LQALSQLGCLS-AVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQMTER 512
+ A +QLG A + V + + + + ++LI Y+KCG + A +F M +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 513 CLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
+ ++++M+ A HG E L LF++M IKP+ +TF L ACSHSGLV++G Q+
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 572 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 631
F SM + + + P HY C++DLL R G+L EA L+K+M LL ACR++
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 632 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
+ EI E A+ + +LEP +Y+L+SN+ A G W V +R + K+K LK TP S +
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Query: 692 ELDKQREV 699
+DK ++
Sbjct: 528 -VDKNGQM 534
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 349 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL--QYARLVFN 406
L +LIS + D ++ + IHG+VLR I ++I T K G YAR V
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 407 RMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 466
++ R+ WT++I GY G DEAI ++ +++E + S T +LL+A + L+
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 526
++ H T+R + V N++I Y KC ++ AR +F +M ER + SW ++ AYA
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 527 HGNY-------------------------------AEVLKLFNHMKLGNIKPDELTFTSI 555
GN E L+ F+ M+ I+ DE+T
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 556 LTACSHSG---LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
++AC+ G + +QI + Y+ V + +ID+ S+ G + EA N+ SM
Sbjct: 288 ISACAQLGASKYADRAVQIAQK--SGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 162/369 (43%), Gaps = 48/369 (13%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
+ ++ N K L S++ L C+ L ++ K++H ++ L+ C++ + LIR ++
Sbjct: 38 FSEISNQK-ELLVSSLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTK 93
Query: 88 YGKLED--AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVT 145
G D A RV + + ++ +T++I YA G A + M+ + + P T
Sbjct: 94 LGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGK--FDEAIAMYGCMRKEEITPVSFT 151
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIR-RGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 204
+LL A + L GR H R RGF C T++DMY KC + A VF +
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGF--CFVYVGNTMIDMYVKCESIDCARKVFDE 209
Query: 205 MNATSTTVGSWNPLIAAY-------------------------------LHNGQALEAFE 233
M V SW LIAAY N + EA E
Sbjct: 210 M--PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267
Query: 234 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD--MVACTALVDL 291
F +M + D +T+A I +CA+L + + G P +V +AL+D+
Sbjct: 268 YFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDM 327
Query: 292 YSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVAL 349
YSK +V +A +F + NK+ Y+ M+ G + EA+++FH M+ + + PN
Sbjct: 328 YSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVT 387
Query: 350 FLNLISAVS 358
F+ + A S
Sbjct: 388 FVGALMACS 396
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 139/306 (45%), Gaps = 34/306 (11%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+ E + Y ++ + + + LK+C + L G++ H + +L +VG++
Sbjct: 130 FDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNT 189
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG-SCVYGAFRIAST------ 133
+I +Y + ++ A +VFDE+ +D++++T +I AYA G C F T
Sbjct: 190 MIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAW 249
Query: 134 ----------------------MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR 171
M+ + + VT+ + A A+LG+ + A +
Sbjct: 250 TAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQK 309
Query: 172 RGFGVCDE-IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALE 230
G+ D + + L+DMY KCG V+ A VF MN + V +++ +I +G+A E
Sbjct: 310 SGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN--NKNVFTYSSMILGLATHGRAQE 367
Query: 231 AFELFRQMI-HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTAL 288
A LF M+ ++ P+ +T A+++C+ + G+ + M + GV+P T +
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCM 427
Query: 289 VDLYSK 294
VDL +
Sbjct: 428 VDLLGR 433
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 237/467 (50%), Gaps = 37/467 (7%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 325
K H YMI G+ D + ++ S + A +F + ++N M+
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 326 DLPVE---AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 382
D P AI V+ ++ + P+ F ++ + D+ R IHG V+ + + V
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSV 151
Query: 383 EIANQIIHTYAKCGYLQYARLVFNRMRSRDL----------------------------- 413
+ +I Y CG L AR +F+ M +D+
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 414 ----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
VSWT +I+GY G EAI +F+ + EN+ D VTL+++L A + LG L +
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 470 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGN 529
+ + +S+NN++I YAK G + A +F+ + ER + +W ++ A HG+
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
AE L +FN M ++P+++TF +IL+ACSH G V+ G ++F SM +Y I P HY
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPR 649
C+IDLL RAG+L EA ++KSMP ++A +LL+A ++ D E+GE +++KLEP
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN 451
Query: 650 NSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
NS +Y+L++N+ + GRWDE +R M K +K G S IE++ +
Sbjct: 452 NSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 52/361 (14%)
Query: 217 PLIAAYLHNG--QALE----------AFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 264
P YLHN +AL A ++R++ PD T + + +
Sbjct: 74 PCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVW 133
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMM---- 319
G+ IHG ++ G + + T L+ +Y S + ARKMF+ + KD ++N ++
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 320 -----------------------------TGYLKNDLPVEAINVFHEMIKMSVSPNVALF 350
+GY K+ EAI VF M+ +V P+
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQYITR-VEIANQIIHTYAKCGYLQYARLVFNRMR 409
L ++SA +DL + L I YV H+ + R V + N +I YAK G + A VF +
Sbjct: 254 LAVLSACADLGSLELGERICSYV-DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
R++V+WT++I G HGH EA+ +F + + +R + VT I++L A S +G + K
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 470 VHCLTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAM 526
+ + R+ +G ++ + +I + GKL A + + M + + W ++L A +
Sbjct: 373 LFN-SMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNV 431
Query: 527 H 527
H
Sbjct: 432 H 432
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 175/410 (42%), Gaps = 51/410 (12%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY--- 116
K+ H I LN D + I S G L A+ VF + + ++I A
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 117 ----AHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR 172
AHS VY D +P +L A ++ + GR IHG +
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFP------FVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 173 GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--------NATSTTVG----------- 213
GF + T L+ MY CGG+ A +F +M NA G
Sbjct: 146 GFDSSVHVV-TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 214 ------------SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
SW +I+ Y +G+A EA E+F++M+ V PD +TL + +CA+L
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 320
L G+ I Y+ G+ + A++D+Y+K ++TKA +FE + ++ V + ++
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 380
G + EA+ +F+ M+K V PN F+ ++SA S + + L + + +R +Y
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS-MRSKYGI 383
Query: 381 RVEIANQ--IIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGY-VHH 426
I + +I + G L+ A V M + + W S++ VHH
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHH 433
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 165/372 (44%), Gaps = 49/372 (13%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D LK V + + FG+++H + +S V + LI++Y G L DA ++F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174
Query: 99 DEITNKDL---------------------------------VAYTSIITAYAHSGGSCVY 125
DE+ KD+ V++T +I+ YA SG +
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS-- 232
Query: 126 GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
A + M + + P+ VTL+++L A A LGSL+ G I Y RG + +
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSL-NNAV 291
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
+DMY K G + A VF +N V +W +IA +G EA +F +M+ V P
Sbjct: 292 IDMYAKSGNITKALDVFECVN--ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP 349
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKFDVTKARKMF 304
+ +T + +C+ + ++ GK + M + G+ P++ ++DL + K R+
Sbjct: 350 NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR--AGKLREAD 407
Query: 305 ERLRN----KDAVIYNVMMTGY-LKNDLPVEAINVFHEMIKMSV--SPNVALFLNLISAV 357
E +++ +A I+ ++ + +DL + E+IK+ S N L NL S +
Sbjct: 408 EVIKSMPFKANAAIWGSLLAASNVHHDLEL-GERALSELIKLEPNNSGNYMLLANLYSNL 466
Query: 358 SDLRDIRLARSI 369
+ R+ R++
Sbjct: 467 GRWDESRMMRNM 478
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 253/478 (52%), Gaps = 35/478 (7%)
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIY 315
CA L K++H +++++G+ LV++Y K + A ++F+ + ++D + +
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
++T + +L + ++VF + S + P+ +F L+ A ++L I R +H + +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 434
+Y + + ++ YAKCG L A+ VF+ +R ++ +SWT+M++GY G +EA+
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 435 LFRLLQRENLR--------------------------------IDSVTLISLLQALSQLG 462
LFR+L +NL +D + L S++ A + L
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
A ++VH L + ++N+LI YAKC + A+ +F +M R + SW +++
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
A HG + L L++ M +KP+E+TF ++ ACSH G VE+G ++F+SM ++Y I
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 642
P HY C++DLL R+G L EA NL+ +MP LLSAC+ G ++G IA
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 643 IL-KLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 699
++ + ++ S+Y+L+SNI A W +V+ R + E++ PG+S +E+ K+ EV
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEV 490
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 177/356 (49%), Gaps = 37/356 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L+ C L K +H +KL + C + ++L+ +Y + G A +VFDE+ ++D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 107 VAYTSIITA--YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
+A+ S++TA A+ G + +S L P+ +L+ A A LGS+ GR
Sbjct: 70 IAWASVLTALNQANLSGKTLS---VFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST-------------- 210
+H + I + DE+ +++L+DMY KCG + A AVF + +T
Sbjct: 127 VHCHFIVSEYA-NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 211 ---------------TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV-LPDLLTLANAI 254
+ SW LI+ ++ +G+ LEAF +F +M +V + D L L++ +
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAV 313
+CA L G+ +HG +I +G + + AL+D+Y+K DV A+ +F R+R++D V
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 369
+ ++ G ++ +A+ ++ +M+ V PN F+ LI A S + + R +
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 361
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 205/471 (43%), Gaps = 80/471 (16%)
Query: 150 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS 209
L A+ +L +A+H + ++ G C + TL+++Y KCG A VF +M
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPL-ANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 210 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAELDYLCHGKS 268
+W ++ A + + +F + L PD + + +CA L + HG+
Sbjct: 69 HI--AWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND- 326
+H + I D V ++LVD+Y+K + A+ +F+ +R K+ + + M++GY K+
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 327 ----------LPV--------------------EAINVFHEMIKMSVSPNVALFL-NLIS 355
LPV EA +VF EM + V L L +++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
A ++L R +HG V+ + + V I+N +I YAKC + A+ +F+RMR RD+VS
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
WTS+I G HG ++A+ L+ + ++ + VT + L+ A S +G + +E
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE------ 360
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE-----RCLTSWNAMLGAYAMHGNY 530
LFQ MT+ L + +L G
Sbjct: 361 -----------------------------LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 531 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 581
E L + M PDE T+ ++L+AC G + G++I ++ + +
Sbjct: 392 DEAENLIHTMPF---PPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKL 439
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 34/279 (12%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
+K+C LG ++ G++VH I +D V SSL+ +Y++ G L A VFD I K+
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
Query: 107 VAYTSIITAYAHSG-------------------------GSCVYG----AFRIASTMQDQ 137
+++T++++ YA SG G G AF + + M+ +
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Query: 138 RL-YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
R+ + + L S++ A A L + GR +HG I GF C I L+DMY KC V
Sbjct: 232 RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFI-SNALIDMYAKCSDVI 290
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A +F +M V SW LI +GQA +A L+ M+ V P+ +T I +
Sbjct: 291 AAKDIFSRMR--HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
Query: 257 CAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 294
C+ + ++ G+ + M + G+ P + T L+DL +
Sbjct: 349 CSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
+ E+ R +D+ LD ++ + +C L G++VH I L +S F+ ++
Sbjct: 225 FTEMRRERVDI------LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNA 278
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
LI +Y++ + A +F + ++D+V++TS+I A G + A + M +
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA--EKALALYDDMVSHGVK 336
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAA 199
PN VT V L++A + +G +++GR + ++ + +G+ + T LLD+ + G + A
Sbjct: 337 PNEVTFVGLIYACSHVGFVEKGRELF-QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 395
Query: 200 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
+ M +W L++A G+ + ++ L D T
Sbjct: 396 NLIHTMPFPPDE-PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST 444
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 253/518 (48%), Gaps = 57/518 (11%)
Query: 221 AYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEP 280
+YLH + A +L Q I +A++S + +L H K + +MI G+
Sbjct: 9 SYLHAPSSHMAEQLLNQFI------------SAVISKSR--HLNHLKQVQSFMIVSGLSH 54
Query: 281 DMVACTALVDLYSK--FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV---EAINVF 335
C L+ + +++ AR +F+R + +Y ++T Y + LP+ A + F
Sbjct: 55 SHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSFF 113
Query: 336 HEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK 394
M+ SV PN ++ ++ + L +H ++ + + V + ++H+YA
Sbjct: 114 RLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYAS 173
Query: 395 -CGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF----------------- 436
++ AR +F+ M R++VSWT+M++GY G I A+ LF
Sbjct: 174 SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA 233
Query: 437 ---------------RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 481
R++ ++R + VT++ +L A +Q G L K +H YR
Sbjct: 234 CTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSS 293
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM- 540
++ V+NSL+ Y KCG L A +F+ +++ LT+WN+M+ +A+HG E + +F M
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
Query: 541 --KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
+ +IKPD +TF +L AC+H GLV +G F M + I P HY C+IDLL RA
Sbjct: 354 KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRA 413
Query: 599 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 658
G+ EA ++ +M A +LL+AC+++G ++ E K ++ L P N +++
Sbjct: 414 GRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMA 473
Query: 659 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
N+ E G W+E R M K + PG+S IE+D +
Sbjct: 474 NLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNE 511
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 183/399 (45%), Gaps = 62/399 (15%)
Query: 45 LCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLY-SEYGKLEDAHRVFDEITN 103
L LKS L VH K + V ++L+ Y S + A ++FDE++
Sbjct: 131 LVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE 190
Query: 104 KDLVAYTSIITAYAHSG------------------------GSCVYGAFRIAST------ 133
+++V++T++++ YA SG +C + +
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
+ + + PN VT+V +L A A+ G+LQ + IH +A RR D +L+D+Y KCG
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS-SDVFVSNSLVDLYGKCG 309
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH---RKVLPDLLTL 250
++ A++VF KM A+ ++ +WN +I + +G++ EA +F +M+ + PD +T
Sbjct: 310 NLEEASSVF-KM-ASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 251 ANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLY---SKFDVTKARKMFER 306
+ +C + G+ M R G+EP + L+DL +FD +A ++
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFD--EALEVMST 425
Query: 307 LRNK-DAVIYNVMMT-----GYLKNDLPVEAINVFHEMIKMSVSPN----VALFLNLISA 356
++ K D I+ ++ G+L DL A+ ++++PN VA+ NL
Sbjct: 426 MKMKADEAIWGSLLNACKIHGHL--DLAEVAVKNL-----VALNPNNGGYVAMMANLYGE 478
Query: 357 VSDLRDIRLARSI--HGYVLRHQYITRVEIANQIIHTYA 393
+ + + R AR + H + +R+EI N++ Y+
Sbjct: 479 MGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYS 517
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT 102
+ L +C G L+ K +H + + +L+SD FV +SL+ LY + G LE+A VF +
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 103 NKDLVAYTSIITAYA-HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQE 161
K L A+ S+I +A H F + + P+ +T + LL+A G + +
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 162 GRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFG--KMNATSTTVGS 214
GR R FG+ I L+D+ + G A V KM A GS
Sbjct: 383 GRGYFDLMTNR-FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGS 437
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 211/406 (51%), Gaps = 35/406 (8%)
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR--LARSIHGYVLRHQYI-T 380
+N EA F +M V PN F+ L+S D L +HGY +
Sbjct: 48 RNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRN 107
Query: 381 RVEIANQIIHTYAKCGYLQYARLVFN-------------------------------RMR 409
V + II Y+K G + ARLVF+ +M
Sbjct: 108 HVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMP 167
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
RDL+SWT+MI G+V G+ +EA++ FR +Q ++ D V +I+ L A + LG LS
Sbjct: 168 ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLW 227
Query: 470 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGN 529
VH + V+NSLI Y +CG + AR +F M +R + SWN+++ +A +GN
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
E L F M+ KPD +TFT LTACSH GLVEEGL+ F+ M +Y I P HY
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYG 347
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEI-GEAIAKQILKLEP 648
C++DL SRAG+L +A LV+SMP + + +LL+AC +G+ + E + K + L
Sbjct: 348 CLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNV 407
Query: 649 RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
++ S+YV++SN+ A G+W+ + +R K LK PG+S IE+D
Sbjct: 408 KSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 171/392 (43%), Gaps = 68/392 (17%)
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH- 265
+TS T SW I NG+ EA + F M V P+ +T + C +
Sbjct: 31 STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEA 90
Query: 266 -GKSIHGYMIRMGVEPDMVAC-TALVDLYSK----------FD----------------- 296
G +HGY ++G++ + V TA++ +YSK FD
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 297 -----VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
V A KMF+++ +D + + M+ G++K EA+ F EM V P+ +
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAII 210
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
++A ++L + +H YVL + V ++N +I Y +CG +++AR VF M R
Sbjct: 211 AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
+VSW S+I G+ +G+ E+++ FR +Q + + D+VT L A S +G +
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE----- 325
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 531
R F KC +++ R + + ++ Y+ G
Sbjct: 326 --GLRYFQ-------------IMKCD---------YRISPR-IEHYGCLVDLYSRAGRLE 360
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
+ LKL M + KP+E+ S+L ACS+ G
Sbjct: 361 DALKLVQSMPM---KPNEVVIGSLLAACSNHG 389
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
+++I Y G++++A ++FD++ +DL+++T++I + G A MQ
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ--EEALLWFREMQISG 201
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
+ P+ V +++ L+A LG+L G +H Y + + F + +L+D+Y +CG V+ A
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRV-SNSLIDLYCRCGCVEFA 260
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
VF N TV SWN +I + NG A E+ FR+M + PD +T A+ +C+
Sbjct: 261 RQVF--YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 259 ELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSK 294
+ + G M + P + LVDLYS+
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSR 355
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 157/366 (42%), Gaps = 40/366 (10%)
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
++ T++ V++TS I +G + A + S M + PN +T ++LL S
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGR--LAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTS 86
Query: 159 LQE--GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 216
E G +HGYA + G + T ++ MY K G K A VF M ++ +WN
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV--TWN 144
Query: 217 PLIAAYLHNGQALEAFELFRQMIHRKVL-------------------------------P 245
+I Y+ +GQ A ++F +M R ++ P
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMF 304
D + + A+ +C L L G +H Y++ + ++ +L+DLY + V AR++F
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 305 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 364
+ + V +N ++ G+ N E++ F +M + P+ F ++A S + +
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 365 LA-RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITG 422
R ++ R+E ++ Y++ G L+ A +LV + + V S++
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 423 YVHHGH 428
+HG+
Sbjct: 385 CSNHGN 390
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S T + ++ + E L + +++ S D AI L +C LG L FG VH
Sbjct: 173 SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG---SC 123
+ + ++ V +SLI LY G +E A +VF + + +V++ S+I +A +G S
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESL 292
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
VY FR MQ++ P+ VT L A + +G ++EG
Sbjct: 293 VY--FR---KMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/515 (30%), Positives = 261/515 (50%), Gaps = 56/515 (10%)
Query: 193 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
G +K A +F ++ ++ N ++ + + + L+ +M R V PD T
Sbjct: 60 GALKYAHKLFDEIPKPDVSIC--NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTF 117
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 311
+ +C++L++ +G + HG ++R G + AL+ ++ D+ A ++F+
Sbjct: 118 VLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAH 177
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
V ++ M +GY K EA+ +F EM K V+ NV
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNV----------------------- 214
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
+I KC + AR +F+R +D+V+W +MI+GYV+ G+
Sbjct: 215 -----------------MITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-------CLTYRAFHGKEL 483
EA+ +F+ ++ D VT++SLL A + LG L K +H ++ + G
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT-- 315
Query: 484 SVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE-VLKLFNHMKL 542
+ N+LI YAKCG ++ A +F+ + +R L++WN ++ A+H +AE +++F M+
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH--HAEGSIEMFEEMQR 373
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 602
+ P+E+TF ++ ACSHSG V+EG + F M Y I P HY C++D+L RAGQL
Sbjct: 374 LKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLE 433
Query: 603 EAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 662
EA+ V+SM ++ TLL AC++YG+ E+G+ +++L + S YVL+SNI A
Sbjct: 434 EAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYA 493
Query: 663 EGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQR 697
G+WD V +R M D +K G SLIE D +
Sbjct: 494 STGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDK 528
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 237/529 (44%), Gaps = 57/529 (10%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLI--RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA 117
K++H + L S+ V LI S G L+ AH++FDEI D+ ++ A
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 118 HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC 177
S + + M+ + + P+R T +L A +KL G A HG +R GF V
Sbjct: 89 QSMKP--EKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF-VL 145
Query: 178 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
+E + L+ + CG + +A+ +F +A + V +W+ + + Y G+ EA LF +
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDD-SAKAHKV-AWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 238 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV 297
M ++ + + L C E+D
Sbjct: 204 MPYKDQVA-WNVMITGCLKCKEMD------------------------------------ 226
Query: 298 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
AR++F+R KD V +N M++GY+ P EA+ +F EM P+V L+L+SA
Sbjct: 227 -SARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 358 SDLRDIRLARSIHGYVLRHQYITR-----VEIANQIIHTYAKCGYLQYARLVFNRMRSRD 412
+ L D+ + +H Y+L ++ I N +I YAKCG + A VF ++ RD
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRD 345
Query: 413 LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC 472
L +W ++I G H H + +I +F +QR + + VT I ++ A S G + ++
Sbjct: 346 LSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS 404
Query: 473 LTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 529
L R + E ++ + ++ + G+L A + M E W +LGA ++GN
Sbjct: 405 LM-RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGN 463
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 578
E+ K N KL +++ DE +L+ S +G+Q R M +
Sbjct: 464 -VELGKYANE-KLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 186/423 (43%), Gaps = 53/423 (12%)
Query: 267 KSIHGYMIRMGVEPDMVACTALV---DLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYL 323
K IH M+ G+ ++ L+ L + A K+F+ + D I N ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
++ P + ++++ EM K VSP+ F ++ A S L + HG V+RH ++
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
+ N +I +A CG L A +F+ V+W+SM +GY G IDEA+ LF + +
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK- 207
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
D V N +IT KC +++ AR
Sbjct: 208 ---DQVAW-----------------------------------NVMITGCLKCKEMDSAR 229
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
LF + TE+ + +WNAM+ Y G E L +F M+ PD +T S+L+AC+ G
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 564 LVEEG----LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
+E G + I + +I G +N +ID+ ++ G + A + + + S
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS-T 348
Query: 620 LCTLLSACRLY---GDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 676
TL+ L+ G E+ E + Q LK+ P N +++ + + GR DE ++
Sbjct: 349 WNTLIVGLALHHAEGSIEMFEEM--QRLKVWP-NEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 677 TKD 679
+D
Sbjct: 406 MRD 408
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 51/298 (17%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKL-NLNSDCFVGS-- 79
E L + +++++ D I L +C LG LE GKR+H+ ++ +++S +VG+
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 80 --SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA--HSGGSCVYGAFRIASTMQ 135
+LI +Y++ G ++ A VF + ++DL + ++I A H+ GS + MQ
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGS-----IEMFEEMQ 372
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
+++PN VT + ++ A + G + EGR + + + DMY+
Sbjct: 373 RLKVWPNEVTFIGVILACSHSGRVDEGRK----------------YFSLMRDMYN----- 411
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+ + ++ GQ EAF M K+ P+ + +
Sbjct: 412 ------------IEPNIKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTLLG 456
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEP--DMVACTALVDLYSKFD-VTKARKMFERLRNK 310
+C + GK + ++ M + D V + + ++D V K RKMF+ R K
Sbjct: 457 ACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVK 514
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/613 (26%), Positives = 289/613 (47%), Gaps = 63/613 (10%)
Query: 86 SEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVT 145
S GK+ +A + FD + K + ++ SI++ Y +G + A + D+ N V+
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP------KEARQLFDEMSERNVVS 81
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
L+ K + E R + R + T ++ Y + G V A ++F +M
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELMPERNV-----VSWTAMVKGYMQEGMVGEAESLFWRM 136
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 265
+ SW + + +G+ +A +L+ D++ + + + S + LC
Sbjct: 137 PERNEV--SWTVMFGGLIDDGRIDKARKLY----------DMMPVKDVVASTNMIGGLC- 183
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
R G V +AR +F+ +R ++ V + M+TGY +N
Sbjct: 184 ---------REG------------------RVDEARLIFDEMRERNVVTWTTMITGYRQN 216
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFL--NLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
+ A +F M + + ++ L L + D + + V
Sbjct: 217 NRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF----------FEVMPMKPVI 266
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
N +I + + G + AR VF+ M RD +W MI Y G EA+ LF +Q++
Sbjct: 267 ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+R +LIS+L + L L ++VH R ++ V + L+T Y KCG+L A+
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAK 386
Query: 504 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
+F + + + + WN+++ YA HG E LK+F+ M P+++T +ILTACS++G
Sbjct: 387 LVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
+EEGL+IF SM ++ + P HY+C +D+L RAGQ+ +A L++SM + L
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 624 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
L AC+ + ++ E AK++ + EP N+ +YVL+S+I A +W +VA +R + +
Sbjct: 507 LGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVS 566
Query: 684 STPGYSLIELDKQ 696
PG S IE+ K+
Sbjct: 567 KFPGCSWIEVGKK 579
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 140/286 (48%), Gaps = 14/286 (4%)
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
D +++I G++++A +FDE+ +++V +T++IT Y + V A ++
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDV--ARKLFEV 228
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
M ++ V+ S+L G +++ + C+ ++ + + G
Sbjct: 229 MPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN-----AMIVGFGEVG 279
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
+ A VF M +W +I AY G LEA +LF QM + V P +L +
Sbjct: 280 EISKARRVFDLMEDRDN--ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 312
+ CA L L +G+ +H +++R + D+ + L+ +Y K ++ KA+ +F+R +KD
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+++N +++GY + L EA+ +FHEM PN + +++A S
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
+++I + E G++ A RVFD + ++D + +I AY G A + + MQ Q
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE--LEALDLFAQMQKQG 326
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKM 197
+ P+ +L+S+L A L SLQ GR +H + +R F D+++ + L+ MY KCG +
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD--DDVYVASVLMTMYVKCGELVK 384
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 257
A VF + +S + WN +I+ Y +G EA ++F +M +P+ +TL + +C
Sbjct: 385 AKLVFDRF--SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 258 AELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK-DAVI 314
+ L G I M + V P + + VD+ + V KA ++ E + K DA +
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502
Query: 315 YNVMM 319
+ ++
Sbjct: 503 WGALL 507
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L C L L++G++VH ++ + D +V S L+ +Y + G+L A VFD ++KD+
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+ + SII+ YA G A +I M PN+VTL+++L A + G L+EG I
Sbjct: 398 IMWNSIISGYASHG--LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 167 GYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMN-ATSTTVGSWNPLIAA 221
++ F V + + +DM + G V A + M TV W L+ A
Sbjct: 456 -ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV--WGALLGA 509
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 373 VLRHQYITRVEIANQI-IHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
+LR Y+T + I ++ G + AR F+ ++ + + SW S+++GY +G E
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 491
A LF + N+ V+ L+ + + + V + + + +++
Sbjct: 67 ARQLFDEMSERNV----VSWNGLVSGYIKNRMIVEARNV----FELMPERNVVSWTAMVK 118
Query: 492 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 551
Y + G + A LF +M ER SW M G G + KL++ M + ++ +
Sbjct: 119 GYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----VA 174
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
T+++ G V+E IF M RE +V + +I + ++ A L + M
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEM-RERNVVT----WTTMITGYRQNNRVDVARKLFEVM 229
Query: 612 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEP 648
P + + ++L L G E E +++ ++P
Sbjct: 230 PE-KTEVSWTSMLLGYTLSGRIEDAEEFF-EVMPMKP 264
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 247/444 (55%), Gaps = 2/444 (0%)
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLR 308
+ + +LS A G +HGY+++ G+ + L++ YSK + +R+ FE
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 368
K + ++ +++ + +N+LP ++ +M+ ++ P+ + + + + L + RS
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 428
+H ++ Y V + + ++ YAKCG + YAR +F+ M R++V+W+ M+ GY G
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 488
+EA+ LF+ ENL ++ + S++ + L +++H L+ ++ V +S
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 489 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 548
L++ Y+KCG A +F ++ + L WNAML AYA H + +V++LF MKL +KP+
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPN 317
Query: 549 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 608
+TF ++L ACSH+GLV+EG F M +E I P + HY ++D+L RAG+L EA ++
Sbjct: 318 FITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Query: 609 KSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWD 668
+MP + + LL++C ++ +TE+ A ++ +L P +S ++ +SN A GR++
Sbjct: 377 TNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFE 436
Query: 669 EVAHIRAMTKDKELKSTPGYSLIE 692
+ A R + +D+ K G S +E
Sbjct: 437 DAAKARKLLRDRGEKKETGLSWVE 460
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 125/247 (50%), Gaps = 5/247 (2%)
Query: 48 KSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLV 107
KSC L R + G+ VH S+K ++D FVGSSL+ +Y++ G++ A ++FDE+ +++V
Sbjct: 124 KSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVV 183
Query: 108 AYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHG 167
++ ++ YA G + A + + L N + S++ A L+ GR IHG
Sbjct: 184 TWSGMMYGYAQMGEN--EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG 241
Query: 168 YAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 227
+I+ F ++L+ +Y KCG + A VF ++ + +G WN ++ AY +
Sbjct: 242 LSIKSSFDS-SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN--LGIWNAMLKAYAQHSH 298
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
+ ELF++M + P+ +T N + +C+ + G+ M +EP +
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYAS 358
Query: 288 LVDLYSK 294
LVD+ +
Sbjct: 359 LVDMLGR 365
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 172/380 (45%), Gaps = 15/380 (3%)
Query: 59 GKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH 118
G ++H +K L+ V ++LI YS+ D+ R F++ K ++SII+ +A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
+ + + M L P+ L S + A L GR++H +++ G+ D
Sbjct: 94 N--ELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA-D 150
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
++L+DMY KCG + A +F +M V +W+ ++ Y G+ EA LF++
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEM--PQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT 298
+ + + + ++ I CA L G+ IHG I+ + ++LV LYSK V
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 299 K-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
+ A ++F + K+ I+N M+ Y ++ + I +F M + PN FLN+++A
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQ----IIHTYAKCGYLQYARLVFNRMRSRDL 413
S + R Y +R+E ++ ++ + G LQ A V M
Sbjct: 329 SHAGLVDEGR----YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPT 384
Query: 414 VS-WTSMITGYVHHGHIDEA 432
S W +++T H + + A
Sbjct: 385 ESVWGALLTSCTVHKNTELA 404
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 176/644 (27%), Positives = 304/644 (47%), Gaps = 105/644 (16%)
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFETTLLDMYHKCGGVKMAAAV 201
LVS L + A + GR IH ++ G +C+ + L+MY KC + A +V
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSV-----LNMYAKCRLLADAESV 98
Query: 202 F---GKMNATSTTVG--------------------------SWNPLIAAYLHNGQALEAF 232
F K+++ S + S+ LI Y N Q EA
Sbjct: 99 FRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAM 158
Query: 233 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY 292
ELFR+M + ++ + +TLA I +C+ L + + + I++ +E + T L+ +Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 293 SK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH--------------- 336
+ ARK+F+ + ++ V +NVM+ GY K L +A +F
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 337 ----------------EMIKMSVSPNVALFLNLISAVS--------------------DL 360
EM++ + P+ + ++L+SA + D
Sbjct: 279 GCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDC 338
Query: 361 RDIRLARSIHGYVLRH-------QYITRVE--IA--NQIIHTYAKCGYLQYARLVFNRMR 409
D A IH Y + + Q+ V+ IA N +I + K G ++ AR VF++
Sbjct: 339 YDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH 398
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVK 468
+D+ SW +MI+GY A+ LFR ++ ++ D++T++S+ A+S LG L K
Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGK 458
Query: 469 EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ---MTERCLTSWNAMLGAYA 525
H + ++ ++I YAKCG + A +F Q ++ ++ WNA++ A
Sbjct: 459 RAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSA 518
Query: 526 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 585
HG+ L L++ ++ IKP+ +TF +L+AC H+GLVE G F SM ++ I P
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDI 578
Query: 586 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 645
HY C++DLL +AG+L EA ++K MP LLSA R +G+ EI E A ++
Sbjct: 579 KHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAA 638
Query: 646 LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 689
++P + V++SN+ A+ GRW++VA +R + ++++ + +S
Sbjct: 639 IDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFS 682
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/482 (20%), Positives = 209/482 (43%), Gaps = 72/482 (14%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
+ + E + + +++N L+ + + +C LG + + + +IKL L F
Sbjct: 150 QNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVF 209
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG---------------- 120
V ++L+ +Y L+DA ++FDE+ ++LV + ++ Y+ +G
Sbjct: 210 VSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD 269
Query: 121 ----GSCVYGAFRIASTMQDQRLY----------PNRVTLVSLLHAAAKLGSLQEGRAIH 166
G+ + G R + + + +Y P+ V +V LL A+A+ +G +H
Sbjct: 270 IVSWGTMIDGCLR-KNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLH 328
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
G ++RGF C + + T++ Y +K+A F + + S N LIA ++ NG
Sbjct: 329 GTIVKRGFD-CYDFLQATIIHFYAVSNDIKLALQQFEA--SVKDHIASRNALIAGFVKNG 385
Query: 227 ---QALEAFE----------------------------LFRQMI-HRKVLPDLLTLANAI 254
QA E F+ LFR+MI +V PD +T+ +
Sbjct: 386 MVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVF 445
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 313
+ + L L GK H Y+ + P+ A++D+Y+K + A +F + +N +
Sbjct: 446 SAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSS 505
Query: 314 I---YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS-I 369
+N ++ G + A++++ ++ + + PN F+ ++SA + L ++
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYF 565
Query: 370 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGH 428
H ++ ++ K G L+ A+ + +M + D++ W +++ HG+
Sbjct: 566 ESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Query: 429 ID 430
++
Sbjct: 626 VE 627
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 302/624 (48%), Gaps = 49/624 (7%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNL-NSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD 105
L SC +L + G ++H S+K L +D FVG+ L+ LY LE A +VF+++ K
Sbjct: 121 LLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS 179
Query: 106 LVAYTSIITAYAHSG--GSCVY---GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQ 160
L + +++ H G C++ R+ +++ + + + +L + + L
Sbjct: 180 LETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES-------SFLGVLKGVSCVKDLD 232
Query: 161 EGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIA 220
+ +H A ++G C+ +L+ Y KCG MA +F +A S + SWN +I
Sbjct: 233 ISKQLHCSATKKGLD-CEISVVNSLISAYGKCGNTHMAERMF--QDAGSWDIVSWNAIIC 289
Query: 221 AYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEP 280
A + L+A +LF M P+ T + + + + L G+ IHG +I+ G E
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 281 DMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
+V AL+D Y+K ++ +R F+ +R+K+ V +N +++GY D P+ +++F +M+
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQML 408
Query: 340 KMSVSPNVALFLNLISA--VSDLRD-----IRLARSIHGYVL--------RHQYI----- 379
+M P F + + V++L+ +R+ + YVL ++Q +
Sbjct: 409 QMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 380 --------TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
T V N + Y++ G + + + + D VSW I + +E
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL-TYRAFHGKELSVNNSLI 490
I LF+ + + N+R D T +S+L S+L L+ +H L T F + V N LI
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 491 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 550
Y KCG + +F++ E+ L +W A++ +HG E L+ F KPD +
Sbjct: 589 DMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRV 648
Query: 551 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 610
+F SILTAC H G+V+EG+ +F+ M ++Y + P HY C +DLL+R G L EA +L++
Sbjct: 649 SFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIRE 707
Query: 611 MPSTHSSAALCTLLSACRLYGDTE 634
MP + T L C + + +
Sbjct: 708 MPFPADAPVWRTFLDGCNRFAEEQ 731
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/552 (25%), Positives = 275/552 (49%), Gaps = 30/552 (5%)
Query: 60 KRVHVDSIKLN--LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA 117
K +H SI L L +V +++I LY + G++ A +VFD++ ++ V++ +II Y+
Sbjct: 32 KALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYS 91
Query: 118 HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC 177
G V A+ + S M+ PN+ T+ LL A+ ++ G +HG +++ G +
Sbjct: 92 KYGD--VDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMA 147
Query: 178 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
D T LL +Y + ++MA VF M S + +WN +++ H G E FR+
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS--LETWNHMMSLLGHRGFLKECMFFFRE 205
Query: 238 MIHRKVL---PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
++ L + + +LD K +H + G++ ++ +L+ Y K
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVKDLDI---SKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 295 FDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
T A +MF+ + D V +N ++ K++ P++A+ +F M + SPN ++++
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+ S ++ + R IHG ++++ T + + N +I YAKCG L+ +RL F+ +R +++
Sbjct: 323 LGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQ--RENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
V W ++++GY + D I L LQ + R T + L++ C++ ++++H
Sbjct: 383 VCWNALLSGYANK---DGPICLSLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLH 435
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNY 530
+ R + V +SL+ +YAK +N A L + + N + G Y+ G Y
Sbjct: 436 SVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQY 495
Query: 531 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC 590
E +KL + ++ +PD +++ + ACS S EE +++F+ M++ I P + +
Sbjct: 496 HESVKLISTLE----QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS-NIRPDKYTFVS 550
Query: 591 IIDLLSRAGQLT 602
I+ L S+ LT
Sbjct: 551 ILSLCSKLCDLT 562
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 238/516 (46%), Gaps = 63/516 (12%)
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-----TTLLDMYHKCGGVKMAAA 200
+VSLL+ K S +A+H +I +C + + ++ +Y K G V +A
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSIT----LCSVLLQPVYVCNNIISLYEKLGEVSLAGK 70
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
VF +M + S+N +I Y G +A+ +F +M + LP+ T++ +LSCA L
Sbjct: 71 VFDQMPERNKV--SFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS-GLLSCASL 127
Query: 261 DYLCHGKSIHGYMIRMGV-EPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVM 318
D G +HG ++ G+ D T L+ LY + D+ + A ++FE + K +N M
Sbjct: 128 DVRA-GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHM 186
Query: 319 MT-----GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
M+ G+LK E + F E+++M S + FL ++ VS ++D+ +++ +H
Sbjct: 187 MSLLGHRGFLK-----ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSA 241
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
+ + + N +I Y KCG A +F S D+VSW ++I + +A+
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 493
LF + + T +S+L S + LS +++H + + + + N+LI Y
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFY 361
Query: 494 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
AKCG L +R F + ++ + WNA+L YA + + L LF M +P E TF+
Sbjct: 362 AKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFS 420
Query: 554 SILTACS-------HSGLVEEGLQ----IFRSMIREY--------------------TIV 582
+ L +C HS +V G + + S++R Y ++V
Sbjct: 421 TALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSM--PSTHS 616
P N + + SR GQ E+ L+ ++ P T S
Sbjct: 481 P----LNIVAGIYSRRGQYHESVKLISTLEQPDTVS 512
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 208/457 (45%), Gaps = 48/457 (10%)
Query: 37 SLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHR 96
SL S+ LK + L+ K++H + K L+ + V +SLI Y + G A R
Sbjct: 212 SLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAER 271
Query: 97 VFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKL 156
+F + + D+V++ +II A A S A ++ +M + PN+ T VS+L ++ +
Sbjct: 272 MFQDAGSWDIVSWNAIICATAKSENP--LKALKLFVSMPEHGFSPNQGTYVSVLGVSSLV 329
Query: 157 GSLQEGRAIHGYAIRRGFGVCDE--IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 214
L GR IHG I+ G C+ + L+D Y KCG ++ + F + +
Sbjct: 330 QLLSCGRQIHGMLIKNG---CETGIVLGNALIDFYAKCGNLEDSRLCFDYIR--DKNIVC 384
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN L++ Y + + LF QM+ P T + A+ SC + + +H ++
Sbjct: 385 WNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIV 439
Query: 275 RMGVEPDMVACTALVDLYSKFDVT---------------------------------KAR 301
RMG E + ++L+ Y+K + ++
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESV 499
Query: 302 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 361
K+ L D V +N+ + ++D E I +F M++ ++ P+ F++++S S L
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLC 559
Query: 362 DIRLARSIHGYVLRHQY-ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 420
D+ L SIHG + + + + N +I Y KCG ++ VF R ++L++WT++I
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALI 619
Query: 421 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
+ HG+ EA+ F+ + D V+ IS+L A
Sbjct: 620 SCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTA 656
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 236/469 (50%), Gaps = 41/469 (8%)
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLK 324
GK IH +I+ G +PD+ L+ L+ K ++ AR++F+ L YN M++GYLK
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI------RLARSIHGYVLRHQY 378
+ L E + + M S L+++ S+ R L R +H +++
Sbjct: 113 HGLVKELLLLVQRM-SYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 438
+ ++ TY K G L+ AR VF M+ ++V TSMI+GY++ G +++A +F
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 439 --------------------------------LQRENLRIDSVTLISLLQALSQLGCLSA 466
+QR + T S++ A S L
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 526
++VH ++ + + +SL+ YAKCG +N AR +F QM E+ + SW +M+ Y
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 586
+GN E L+LF MK I+P+ +TF L+ACSHSGLV++G +IF SM R+Y++ P
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 587 HYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL 646
HY CI+DL+ RAG L +A+ ++MP S LLS+C L+G+ E+ A ++ KL
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKL 471
Query: 647 EP-RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
+ +Y+ +SN+ A +WD V+ IR + K + + T G S D
Sbjct: 472 NADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 207/441 (46%), Gaps = 56/441 (12%)
Query: 140 YPNRVTLVSLLHAAAKLGSLQE---------GRAIHGYAIRRGFGVCDEIFETTLLDMYH 190
+P + + SL A G+LQE G+ IH I+ GF D LL ++
Sbjct: 22 FPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQP-DLNISIKLLILHL 80
Query: 191 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 250
KCG + A VF ++ T+ ++N +I+ YL +G E L ++M + D TL
Sbjct: 81 KCGCLSYARQVFDEL--PKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 251 A------NAILSCAELD-YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARK 302
+ N+ S L LC + +H +I+ VE D V TALVD Y K + AR
Sbjct: 139 SMVLKASNSRGSTMILPRSLC--RLVHARIIKCDVELDDVLITALVDTYVKSGKLESART 196
Query: 303 MFERLRN-------------------------------KDAVIYNVMMTGYLKN-DLPVE 330
+FE +++ KD V+YN M+ G+ ++ +
Sbjct: 197 VFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKR 256
Query: 331 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
+++++ M + PN++ F ++I A S L + + +H +++ T +++ + ++
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 391 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVT 450
YAKCG + AR VF++M+ +++ SWTSMI GY +G+ +EA+ LF ++ + + VT
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 451 LISLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNSLITTYAKCGKLNMARYLFQQM 509
+ L A S G + E+ R + K ++ ++ + G LN A + M
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Query: 510 TERCLTS-WNAMLGAYAMHGN 529
ER + W A+L + +HGN
Sbjct: 437 PERPDSDIWAALLSSCNLHGN 457
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 163/335 (48%), Gaps = 23/335 (6%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
LD IT + + V G+LE + V +++K + + +S+I Y G +EDA +
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTV-FETMK---DENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 98 FDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG 157
F+ KD+V Y +++ ++ SG + + + +MQ +PN T S++ A + L
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKR-SVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 158 SLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 216
S + G+ +H ++ GV I ++LLDMY KCGG+ A VF +M V SW
Sbjct: 288 SHEVGQQVHAQIMKS--GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ--EKNVFSWT 343
Query: 217 PLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR- 275
+I Y NG EA ELF +M ++ P+ +T A+ +C+ + G I M R
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRD 403
Query: 276 MGVEPDMVACTALVDLYSKF-DVTK----ARKMFERLRNKDAVIYNVMMTG-YLKNDLPV 329
++P M +VDL + D+ K AR M ER D+ I+ +++ L ++ +
Sbjct: 404 YSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER---PDSDIWAALLSSCNLHGNVEL 460
Query: 330 EAINVFHEMIKMSVS--PNVALFLNLISAVSDLRD 362
+I E+ K++ P L L+ + A +D D
Sbjct: 461 ASIAA-SELFKLNADKRPGAYLALSNVYASNDKWD 494
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 182/424 (42%), Gaps = 49/424 (11%)
Query: 59 GKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH 118
GK++H D IK D + L+ L+ + G L A +VFDE+ L AY +I+ Y
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS---LQEG--RAIHGYAIRRG 173
G V + M + TL +L A+ GS L R +H I+
Sbjct: 113 HG--LVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 174 FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
+ D++ T L+D Y K G ++ A VF M V +I+ Y++ G +A E
Sbjct: 171 VEL-DDVLITALVDTYVKSGKLESARTVFETMK--DENVVCCTSMISGYMNQGFVEDAEE 227
Query: 234 LFRQMIHRKVL--------------------------------PDLLTLANAILSCAELD 261
+F + ++ P++ T A+ I +C+ L
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 320
G+ +H +++ GV + ++L+D+Y+K + AR++F++++ K+ + M+
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR-HQYI 379
GY KN P EA+ +F M + + PN FL +SA S + I + R +
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAII---- 434
++E I+ + G L A M R D W ++++ HG+++ A I
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASE 467
Query: 435 LFRL 438
LF+L
Sbjct: 468 LFKL 471
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 156/342 (45%), Gaps = 35/342 (10%)
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 423
+ + IH +++ + + I+ +++ + KCG L YAR VF+ + L ++ MI+GY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK-- 481
+ HG + E ++L + + + D TL +L+A + G + C R H +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC---RLVHARII 167
Query: 482 --ELSVNNSLIT----TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 535
++ +++ LIT TY K GKL AR +F+ M + + +M+ Y G + +
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSG-LVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
+FN K+ +I + + +++ S SG + + ++ SM R P + +I
Sbjct: 228 IFNTTKVKDI----VVYNAMVEGFSRSGETAKRSVDMYISMQRA-GFHPNISTFASVIGA 282
Query: 595 LS-----RAGQLTEAYNLVKSMPSTH--SSAALCTLLSACRLYGDTEIGEAIAKQIL-KL 646
S GQ A ++KS TH ++L + + C D A+++ ++
Sbjct: 283 CSVLTSHEVGQQVHA-QIMKSGVYTHIKMGSSLLDMYAKCGGIND-------ARRVFDQM 334
Query: 647 EPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGY 688
+ +N S+ + + + G +E + T+ KE + P Y
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALEL--FTRMKEFRIEPNY 374
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 22 GEVLRR----YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFV 77
GE +R Y+ ++ + F + S + +C L E G++VH +K + + +
Sbjct: 251 GETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKM 310
Query: 78 GSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQ 137
GSSL+ +Y++ G + DA RVFD++ K++ ++TS+I Y +G A + + M++
Sbjct: 311 GSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP--EEALELFTRMKEF 368
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
R+ PN VT + L A + G + +G I
Sbjct: 369 RIEPNYVTFLGALSACSHSGLVDKGYEI 396
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 260/510 (50%), Gaps = 46/510 (9%)
Query: 218 LIAAYLHNGQALEAFELFRQMIHRKV-LPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 276
LI ++ G ++A L+ + R V P + L +C + + GK +H I+
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESIKF 75
Query: 277 GVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 335
GV D++ ++L+ +Y K V ARK+F+ + ++ +N M+ GY+ N V A +F
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 336 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH---GYVLRH---------------- 376
E+ SV N ++ +I +I AR + + L++
Sbjct: 136 EEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 377 -----QYITRVEIANQIIHTYAKCGYLQY-----ARLVFNRMRSRDLVSWTSMITGYVHH 426
++ + N + + GY + AR +F R+ +RDLV W ++I GY +
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS-- 484
G+ D+AI F +Q E D+VT+ S+L A +Q G L +EVH L G EL+
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH--RGIELNQF 310
Query: 485 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 544
V+N+LI YAKCG L A +F+ ++ R + N+M+ A+HG E L++F+ M+ +
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD 370
Query: 545 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 604
+KPDE+TF ++LTAC H G + EGL+IF M + + P H+ C+I LL R+G+L EA
Sbjct: 371 LKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEA 429
Query: 605 YNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY-----VLISN 659
Y LVK M + L LL AC+++ DTE+ E + K I++ ++SY ISN
Sbjct: 430 YRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISN 488
Query: 660 ILAEGGRWDEVAHIRAMTKDKELKSTPGYS 689
+ A RW +R + + L+ +PG S
Sbjct: 489 LYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 197/449 (43%), Gaps = 79/449 (17%)
Query: 43 ITLCLKSCV-ALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEI 101
+ L L++C + R+ GK +H +SIK + SD VGSSLI +Y + G + A +VFDE+
Sbjct: 48 VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEM 107
Query: 102 TNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQE 161
+++ + ++I Y +G + + ++ + N VT + ++ K +++
Sbjct: 108 PERNVATWNAMIGGYMSNGDAVLASGL-----FEEISVCRNTVTWIEMIKGYGKRIEIEK 162
Query: 162 GRA-----------IHGYAIRRGFGVCD-------EIFE----------TTLLDMYHKCG 193
R + +++ G V + + FE + ++ Y + G
Sbjct: 163 ARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIG 222
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
V A A+F ++ A + WN LIA Y NG + +A + F M PD +T+++
Sbjct: 223 DVHEARAIFYRVFARDLVI--WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 312
+ +CA+ L G+ +H + G+E + AL+D+Y+K D+ A +FE + +
Sbjct: 281 LSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV 340
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
N M++ + EA+ +F M + + P+ F+ +++A +HG
Sbjct: 341 ACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC-----------VHG- 388
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH----HGH 428
G+L +F+ M+++D+ +H G
Sbjct: 389 -----------------------GFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGK 425
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQA 457
+ EA +RL++ +++ + L +LL A
Sbjct: 426 LKEA---YRLVKEMHVKPNDTVLGALLGA 451
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 8 ITGNLVASCRRRHYGE-VLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVH--V 64
I L+A + Y + + + +++ + D ++ L +C GRL+ G+ VH +
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 65 DSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA-HSGGSC 123
+ + LN FV ++LI +Y++ G LE+A VF+ I+ + + S+I+ A H G
Sbjct: 301 NHRGIELNQ--FVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGK- 357
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
A + STM+ L P+ +T +++L A G L EG I
Sbjct: 358 --EALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKI 397
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 417 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 476
+++I ++ G +A++L+ ++R + + L + + K +H + +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 477 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 536
++ V +SLI+ Y KCG + AR +F +M ER + +WNAM+G Y +G+ L
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F + ++ + +T+ ++ +E+ ++F M E V ++ ++ +
Sbjct: 135 FEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKA---WSVMLGVYV 188
Query: 597 RAGQLTEAYNLVKSMPSTHS 616
++ +A + +P ++
Sbjct: 189 NNRKMEDARKFFEDIPEKNA 208
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 250/515 (48%), Gaps = 67/515 (13%)
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACTALVDLYSK----------FD-- 296
LA+ + C + L GK IH ++ G + P+ + L+ +Y K FD
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 297 --------------------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 336
+ +AR +F+ + +D V +N M+ GY ++ EA+ +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 337 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 396
E + + N F L++A R ++L R HG VL +++ V ++ II YAKCG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 397 YLQYARLVFNRMRSRDL-------------------------------VSWTSMITGYVH 425
++ A+ F+ M +D+ VSWT++I GYV
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 426 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
G + A+ LFR + ++ + T S L A + + L KE+H R V
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTER--CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
+SLI Y+K G L + +F+ ++ C+ WN M+ A A HG + L++ + M
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVF-WNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
++P+ T IL ACSHSGLVEEGL+ F SM ++ IVP + HY C+IDLL RAG E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 604 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAE 663
++ MP +L CR++G+ E+G+ A +++KL+P +S+ Y+L+S+I A+
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 664 GGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQRE 698
G+W+ V +R + K + + S IE++K+ E
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVE 562
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 34/311 (10%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
++++ Y + G L A VFD + +D+V++ +++ YA G ++ A +
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGN--LHEALWFYKEFRRSG 174
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
+ N + LL A K LQ R HG + GF + + + +++D Y KCG ++ A
Sbjct: 175 IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGF-LSNVVLSCSIIDAYAKCGQMESA 233
Query: 199 AAVFGKMNATSTTVG-----------------------------SWNPLIAAYLHNGQAL 229
F +M + SW LIA Y+ G
Sbjct: 234 KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGN 293
Query: 230 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
A +LFR+MI V P+ T ++ + + A + L HGK IHGYMIR V P+ + ++L+
Sbjct: 294 RALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLI 353
Query: 290 DLYSKFDVTKARKMFERL--RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
D+YSK +A + R+ D V +N M++ ++ L +A+ + +MIK V PN
Sbjct: 354 DMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNR 413
Query: 348 ALFLNLISAVS 358
+ +++A S
Sbjct: 414 TTLVVILNACS 424
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 181/450 (40%), Gaps = 68/450 (15%)
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
L SLL SL++G+ IH + GF + + L+ MY KCG A VF +M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 206 -----------------------------NATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
+ V SWN ++ Y +G EA ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF- 295
+ + + + A + +C + L + HG ++ G ++V +++D Y+K
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 296 -------------------------------DVTKARKMFERLRNKDAVIYNVMMTGYLK 324
D+ A K+F + K+ V + ++ GY++
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
A+++F +MI + V P F + + A + + +R + IHGY++R +
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
+ +I Y+K G L+ + VF + D V W +MI+ HG +A+ + + +
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 444 LRIDSVTLISLLQALSQLGCL-SAVKEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLN 500
++ + TL+ +L A S G + ++ +T + HG + LI + G
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQ--HGIVPDQEHYACLIDLLGRAGCFK 466
Query: 501 -MARYLFQQMTERCLTSWNAMLGAYAMHGN 529
+ R + + E WNA+LG +HGN
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 34/329 (10%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E L Y + + S + + L +CV +L+ ++ H + S+ + S+I
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221
Query: 83 RLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG--------------------S 122
Y++ G++E A R FDE+T KD+ +T++I+ YA G +
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281
Query: 123 CVYGAFRIASTMQDQRLY---------PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG 173
+ G R S + L+ P + T S L A+A + SL+ G+ IHGY IR
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 174 FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
+ I ++L+DMY K G ++ + VF + V WN +I+A +G +A
Sbjct: 342 VRP-NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCV-FWNTMISALAQHGLGHKALR 399
Query: 234 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHG-KSIHGYMIRMGVEPDMVACTALVDLY 292
+ MI +V P+ TL + +C+ + G + ++ G+ PD L+DL
Sbjct: 400 MLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLL 459
Query: 293 SKFDVTKA--RKMFERLRNKDAVIYNVMM 319
+ K RK+ E D I+N ++
Sbjct: 460 GRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 1 MNMKHPSITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCV----ALGRL 56
M K+P L+A R+ G R LDL +L SC+ ++ L
Sbjct: 271 MPEKNPVSWTALIAGYVRQGSGN---RALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 57 EFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK-DLVAYTSIITA 115
GK +H I+ N+ + V SSLI +YS+ G LE + RVF +K D V + ++I+A
Sbjct: 328 RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISA 387
Query: 116 YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG-RAIHGYAIRRGF 174
A G + A R+ M R+ PNR TLV +L+A + G ++EG R ++ G
Sbjct: 388 LAQHGLG--HKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 175 GVCDEIFETTLLDMYHKCGGVK 196
V D+ L+D+ + G K
Sbjct: 446 -VPDQEHYACLIDLLGRAGCFK 466
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 114/293 (38%), Gaps = 46/293 (15%)
Query: 409 RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK 468
R R + S ++ + + +A+ L ++ +R+ L SLLQ L K
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 469 EVH-CLTYRAFHGKELSVNNSLITTYAKCGK----------------------------- 498
+H L F ++N LI Y KCGK
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 499 --LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
L AR +F M ER + SWN M+ YA GN E L + + IK +E +F +L
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPG---EVHYNC-IIDLLSRAGQLTEAYNLVKSMP 612
TAC S LQ+ R +V G V +C IID ++ GQ+ A M
Sbjct: 187 TACVKS----RQLQLNRQA-HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM- 240
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYV-LISNILAEG 664
+ TL+S GD E E K ++ +N S+ LI+ + +G
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAE---KLFCEMPEKNPVSWTALIAGYVRQG 290
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/642 (26%), Positives = 291/642 (45%), Gaps = 107/642 (16%)
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
L++G H +I+ G + L+++Y K G ++ A VF +M V SWN +
Sbjct: 4 LKDGFLHHIRSIKSG-STLTAVSSNQLVNLYSKSGLLREARNVFDEM--LERNVYSWNAV 60
Query: 219 IAAYLHNGQALEAFELF------RQMI--------------------------HRKVLPD 246
IAAY+ EA ELF R +I HRK D
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 247 L----LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF------- 295
+ T+ + A+L + +G+ +HG +++ G + A ++L+ +YSK
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 296 ---------------------------DVTKARKMFERLRN-KDAVIYNVMMTGYLKNDL 327
D+ KA +F R D + +N ++ GY +N
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 328 PVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 387
EA+ + M + + + F +++ +S L+ +++ + +H VL++ + +++
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 388 IIHTYAKCGYLQYA-------------------------------RLVFNRMRSRDLVSW 416
I+ Y KCG ++YA + +F+ + ++LV W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 417 TSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
T+M GY++ D + L R + E DS+ ++S+L A S + KE+H +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 535
R + + + + Y+KCG + A +F ER +NAM+ A HG+ A+ +
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 595
F M G KPDE+TF ++L+AC H GLV EG + F+SMI Y I P HY C+IDL
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 596 SRAGQLTEAYNLVKSMPSTHSSAA-LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 654
+A +L +A L++ + A L L+AC +TE+ + + +++L +E N S Y
Sbjct: 541 GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRY 600
Query: 655 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+ I+N A GRWDE+ IR + KEL+ G S +DKQ
Sbjct: 601 IQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQ 642
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 200/506 (39%), Gaps = 114/506 (22%)
Query: 63 HVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEI--------------------- 101
H+ SIK + L+ LYS+ G L +A VFDE+
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 102 -----------TNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM---QDQRLYPNRVTLV 147
+DL+ Y ++++ +A + G C A + M + ++ + T+
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDG-CESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRG-----FGVCDEIFETTLLDMYHKCGGVK------ 196
+++ +AKL ++ G +HG ++ G F V ++L+ MY KCG K
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAV------SSLIHMYSKCGKFKEVCNIF 183
Query: 197 ---------------------------MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQAL 229
A +VF + + T+ SWN LIA Y NG
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTI-SWNTLIAGYAQNGYEE 242
Query: 230 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
EA ++ M + D + + + L L GK +H +++ G + + +V
Sbjct: 243 EALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIV 302
Query: 290 DLY--------------------------------SKFDVTKARKMFERLRNKDAVIYNV 317
D+Y S+ + +A+++F+ L K+ V++
Sbjct: 303 DVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTA 362
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSV-SPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 376
M GYL P + + I +P+ + ++++ A S + + IHG+ LR
Sbjct: 363 MFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT 422
Query: 377 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 436
+ ++ + Y+KCG ++YA +F+ RD V + +MI G HHGH ++ F
Sbjct: 423 GILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHF 482
Query: 437 RLLQRENLRIDSVTLISLLQALSQLG 462
+ + D +T ++LL A G
Sbjct: 483 EDMTEGGFKPDEITFMALLSACRHRG 508
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 10/244 (4%)
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH-SGGSCVYGAFRIASTM 134
+ SS+I YS GK+ +A R+FD ++ K+LV +T++ Y + V R + +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELAR--AFI 384
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
++ P+ + +VS+L A + ++ G+ IHG+++R G + D+ T +DMY KCG
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI-LMDKKLVTAFVDMYSKCGN 443
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
V+ A +F T + +N +IA H+G ++F+ F M PD +T +
Sbjct: 444 VEYAERIFDSSFERDTVM--YNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALL 501
Query: 255 LSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK-FDVTKARKMFERLRN--K 310
+C + G+ MI + P+ T ++DLY K + + KA ++ E + K
Sbjct: 502 SACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEK 561
Query: 311 DAVI 314
DAVI
Sbjct: 562 DAVI 565
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
+ N + D + L +C +E GK +H S++ + D + ++ + +YS+ G
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
+E A R+FD +D V Y ++I AH G +F+ M + P+ +T ++LL
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEA--KSFQHFEDMTEGGFKPDEITFMALL 501
Query: 151 HAAAKLGSLQEGRA-----IHGYAIRRGFGVCDEIFETTLLDMYHK 191
A G + EG I Y I G T ++D+Y K
Sbjct: 502 SACRHRGLVLEGEKYFKSMIEAYNISPETG-----HYTCMIDLYGK 542
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 247/469 (52%), Gaps = 2/469 (0%)
Query: 230 EAFELFRQMIHRKVLPDLLTLANAIL-SCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 288
EAFELF + R ++ +A++ +C L + K ++G+M+ G EP+ +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 289 VDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
+ ++ K + AR++F+ + ++ Y +++G++ VEA +F M +
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 348 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 407
F ++ A + L I + + +H L+ + ++ +I Y+KCG ++ AR F
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
M + V+W ++I GY HG+ +EA+ L ++ + ID TL +++ ++L L
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 468 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 527
K+ H R E+ N +L+ Y+K G+++ ARY+F ++ + + SWNA++G YA H
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 528 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 587
G + +KLF M N+ P+ +TF ++L+AC++SGL E+G +IF SM + I P +H
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 588 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLE 647
Y C+I+LL R G L EA ++ P + LL+ACR+ + E+G +A+++ +
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG 524
Query: 648 PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
P +YV++ N+ G+ E A + + K L P + +E+ Q
Sbjct: 525 PEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQ 573
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 178/345 (51%), Gaps = 9/345 (2%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C R L L+++ S F + S +++C+ L + KRV+ + +
Sbjct: 100 CNRFREAFELFEILEIRCS-FKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQ 158
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
++ + ++ ++ + G + DA R+FDEI ++L +Y SII+ + + G AF + M
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN--YVEAFELFKMMW 216
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT-LLDMYHKCGG 194
++ T +L A+A LGS+ G+ +H A++ GV D F + L+DMY KCG
Sbjct: 217 EELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK--LGVVDNTFVSCGLIDMYSKCGD 274
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
++ A F M +T +WN +IA Y +G + EA L M V D TL+ I
Sbjct: 275 IEDARCAFECMPEKTTV--AWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMI 332
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAV 313
+L L K H +IR G E ++VA TALVD YSK+ V AR +F++L K+ +
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+N +M GY + +A+ +F +MI +V+PN FL ++SA +
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 130/264 (49%), Gaps = 18/264 (6%)
Query: 39 DCSAITLC--LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHR 96
DC T L++ LG + GK++HV ++KL + + FV LI +YS+ G +EDA
Sbjct: 221 DCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280
Query: 97 VFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKL 156
F+ + K VA+ ++I YA G S A + M+D + ++ TL ++ + KL
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYS--EEALCLLYDMRDSGVSIDQFTLSIMIRISTKL 338
Query: 157 GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 216
L+ + H IR GF + + T L+D Y K G V A VF K+ + SWN
Sbjct: 339 AKLELTKQAHASLIRNGFE-SEIVANTALVDFYSKWGRVDTARYVFDKL--PRKNIISWN 395
Query: 217 PLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 276
L+ Y ++G+ +A +LF +MI V P+ +T + +CA G S G+ I +
Sbjct: 396 ALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAY-----SGLSEQGWEIFL 450
Query: 277 ------GVEPDMVACTALVDLYSK 294
G++P + +++L +
Sbjct: 451 SMSEVHGIKPRAMHYACMIELLGR 474
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 30 DLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYG 89
D+++S S+D +++ ++ L +LE K+ H I+ S+ ++L+ YS++G
Sbjct: 315 DMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWG 374
Query: 90 KLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSL 149
+++ A VFD++ K+++++ +++ YA+ G A ++ M + PN VT +++
Sbjct: 375 RVDTARYVFDKLPRKNIISWNALMGGYANHGRGT--DAVKLFEKMIAANVAPNHVTFLAV 432
Query: 150 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC-------GGVKMAAAVF 202
L A A G ++G I F E+ M++ C G+ A F
Sbjct: 433 LSACAYSGLSEQGWEI--------FLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 203 GKMNATSTTVGSWNPLIAA 221
+ TTV W L+ A
Sbjct: 485 IRRAPLKTTVNMWAALLNA 503
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 238/463 (51%), Gaps = 35/463 (7%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDL--YSKFDVTKARKMFERLRNKDAVIYNVMMTGYLK 324
K IH +I+ G+ D V + ++ S D+ A +F R+ +K+ ++N ++ G+ +
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 325 NDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR------- 375
+ P AI++F +M+ SV P + ++ A L R R +HG V++
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 376 -------HQYIT-----------------RVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
H Y+T V N +I +AKCG + A+ +F+ M R
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
+ VSW SMI+G+V +G +A+ +FR +Q ++++ D T++SLL A + LG + +H
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 531
R V +LI Y KCG + +F+ ++ L+ WN+M+ A +G
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
+ LF+ ++ ++PD ++F +LTAC+HSG V + FR M +Y I P HY +
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 592 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 651
+++L AG L EA L+K+MP + +LLSACR G+ E+ + AK + KL+P +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 652 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
YVL+SN A G ++E R + K+++++ G S IE+D
Sbjct: 462 CGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 183/409 (44%), Gaps = 40/409 (9%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLY-SEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH 118
K++H IK L SD S ++ + + A+ VF I +K+ + +II ++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
S + + I + P R+T S+ A +LG ++GR +HG I+ G D
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED-D 160
Query: 179 EIFETTLLDMY-------------------------------HKCGGVKMAAAVFGKMNA 207
T+L MY KCG + A +F +M
Sbjct: 161 SFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQ 220
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
+ SWN +I+ ++ NG+ +A ++FR+M + V PD T+ + + +CA L G+
Sbjct: 221 RNGV--SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGR 278
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND 326
IH Y++R E + + TAL+D+Y K + + +FE K +N M+ G N
Sbjct: 279 WIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNG 338
Query: 327 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 386
A+++F E+ + + P+ F+ +++A + ++ A +++ +Y+ I +
Sbjct: 339 FEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-RLMKEKYMIEPSIKH 397
Query: 387 Q--IIHTYAKCGYLQYAR-LVFNRMRSRDLVSWTSMITGYVHHGHIDEA 432
+++ G L+ A L+ N D V W+S+++ G+++ A
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 1 MNMKHPSITGNLVASCRRRHYGEV-LRRYLDLKNSKFSLDCSAITL--CLKSCVALGRLE 57
+N K+P + ++ R + E+ + ++D+ S S+ +T K+ LG+
Sbjct: 84 INHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQAR 143
Query: 58 FGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA 117
G+++H IK L D F+ ++++ +Y G L +A R+F + D+VA+ S+I +A
Sbjct: 144 DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 118 HSG-------------------------GSCVYGAFRIA----STMQDQRLYPNRVTLVS 148
G G G F+ A MQ++ + P+ T+VS
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
LL+A A LG+ ++GR IH Y +R F + + I T L+DMY KCG ++ VF A
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFEL-NSIVVTALIDMYCKCGCIEEGLNVFE--CAP 320
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+ WN +I +NG A +LF ++ + PD ++ + +CA
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 232/458 (50%), Gaps = 40/458 (8%)
Query: 267 KSIHGYMIRMGVE--PDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLK 324
K +H + +R GV+ D++ L+ ++ ARK+F+ +N +YN ++ Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIP-----NLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
+ P E+I +++ + + P+ F + +A + R R +H R + +
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
+I YAK G L AR VF+ M RD+ W +MITGY G + A+ LF + R+N+
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 445 --------------------------------RIDSVTLISLLQALSQLGCLSAVKEVHC 472
+ + +T++S+L A + LG L + +
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 473 LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGAYAMHGNYA 531
+ V N+ I Y+KCG +++A+ LF+++ +R L SWN+M+G+ A HG +
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
E L LF M KPD +TF +L AC H G+V +G ++F+SM + I P HY C+
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 592 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 651
IDLL R G+L EAY+L+K+MP + TLL AC +G+ EI E ++ + KLEP N
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 652 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 689
+ V++SNI A +WD V +R + K + + GYS
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 145/293 (49%), Gaps = 18/293 (6%)
Query: 34 SKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLED 93
S F D T + + LG L +RV + K D V +++I Y G ++
Sbjct: 111 SGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVPVWNAMITGYQRRGDMKA 166
Query: 94 AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ-DQRLYPNRVTLVSLLHA 152
A +FD + K++ ++T++I+ ++ +G A ++ M+ D+ + PN +T+VS+L A
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYS--EALKMFLCMEKDKSVKPNHITVVSVLPA 224
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
A LG L+ GR + GYA GF D I+ ++MY KCG + +A +F ++
Sbjct: 225 CANLGELEIGRRLEGYARENGF--FDNIYVCNATIEMYSKCGMIDVAKRLFEEL-GNQRN 281
Query: 212 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
+ SWN +I + +G+ EA LF QM+ PD +T +L+C + G+ +
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 272 YMIRM-GVEPDMVACTALVDLYSKFDVTKARKMFERLR----NKDAVIYNVMM 319
M + + P + ++DL + V K ++ ++ ++ DAV++ ++
Sbjct: 342 SMEEVHKISPKLEHYGCMIDLLGR--VGKLQEAYDLIKTMPMKPDAVVWGTLL 392
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 160/615 (26%), Positives = 290/615 (47%), Gaps = 45/615 (7%)
Query: 124 VYGAFRIASTMQDQRLYPNRV--TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF 181
+Y AFR S ++ Q V + SLL G+ +H + I G D +
Sbjct: 62 LYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF-DSVL 120
Query: 182 ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR 241
L+ Y + A + N+ WN LI +Y+ N + E+ ++++M+ +
Sbjct: 121 VPKLVTFYSAFNLLDEAQTI--TENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 242 KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKA 300
+ D T + I +CA L +G+ +HG + ++ C AL+ +Y +F V A
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 301 RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF---------- 350
R++F+R+ +DAV +N ++ Y + EA + M V ++ +
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 351 -------------------------LNLISAVSDLRDIRLARSIHGYVLRHQYITRV--E 383
+N + A S + ++ + H V+R +
Sbjct: 299 GNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN 358
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
+ N +I Y++C L++A +VF ++ + L +W S+I+G+ ++ +E L + +
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMA 502
+ +TL S+L +++G L KE HC R K+ L + NSL+ YAK G++ A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 503 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 562
+ +F M +R ++ +++ Y G L F M IKPD +T ++L+ACSHS
Sbjct: 479 KRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 563 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 622
LV EG +F M + I HY+C++DL RAG L +A ++ ++P SSA T
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 623 LLSACRLYGDTEIGE-AIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKE 681
LL AC ++G+T IGE A K +L+ +P + Y+L++++ A G W ++ ++ + D
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 682 LKSTPGYSLIELDKQ 696
++ ++L+E D +
Sbjct: 659 VQKAHEFALMETDSE 673
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 200/432 (46%), Gaps = 46/432 (10%)
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAIL--SCAELDYLCHGKSIHGYMIRMGVEP 280
+ +GQ EAF F + ++ + + ++A L +C + G+ +H + I G+E
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 281 DMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
D V LV YS F++ +A+ + E + +NV++ Y++N E+++V+ M+
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 340 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 399
+ + + ++I A + L D R +HG + + + + N +I Y + G +
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 400 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE----------------- 442
AR +F+RM RD VSW ++I Y + EA F+LL R
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEA---FKLLDRMYLSGVEASIVTWNTIAG 293
Query: 443 ---------------------NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR--AFH 479
N+RI SV +I+ L+A S +G L K HCL R +F
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
+V NSLIT Y++C L A +FQQ+ L++WN+++ +A + E L
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKE 413
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M L P+ +T SIL + G ++ G + ++R + + +N ++D+ +++G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 600 QLTEAYNLVKSM 611
++ A + SM
Sbjct: 474 EIIAAKRVFDSM 485
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 208/447 (46%), Gaps = 54/447 (12%)
Query: 5 HPSITGNLVAS-CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVH 63
HP L+ S R + + E + Y + + D +K+C AL +G+ VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 64 ----VDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
V S + NL +V ++LI +Y +GK++ A R+FD ++ +D V++ +II Y
Sbjct: 208 GSIEVSSHRCNL----YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 120 ----------------------------GGSCV-----YGAFRIASTMQDQRLYPNRVTL 146
G C+ GA M++ + V +
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRR-GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
++ L A + +G+L+ G+ H IR F + +L+ MY +C ++ A VF ++
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 265
A S + +WN +I+ + +N ++ E L ++M+ P+ +TLA+ + A + L H
Sbjct: 384 EANS--LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 266 GKSIHGYMIRMGVEPD-MVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYL 323
GK H Y++R D ++ +LVD+Y+K ++ A+++F+ +R +D V Y ++ GY
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI---- 379
+ A+ F +M + + P+ + ++SA S L R H + +++
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS---HSNLVREGHWLFTKMEHVFGIR 558
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFN 406
R+E + ++ Y + GYL AR +F+
Sbjct: 559 LRLEHYSCMVDLYCRAGYLDKARDIFH 585
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 231/528 (43%), Gaps = 54/528 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L +CV G+++H I L D + L+ YS + L++A + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+ + +I +Y + + + M + + + T S++ A A L GR +H
Sbjct: 150 LPWNVLIGSYIRNKR--FQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
G +I C+ L+ MY + G V +A +F +M+ SWN +I Y
Sbjct: 208 G-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV--SWNAIINCYTSEE 264
Query: 227 QALEAFELFRQMIHRKVLPDLLT-----------------------------------LA 251
+ EAF+L +M V ++T +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 252 NAILSCAELDYLCHGKSIHGYMIR---MGVEPDMVACTALVDLYSK-FDVTKARKMFERL 307
N + +C+ + L GK H +IR + D V +L+ +YS+ D+ A +F+++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQV 383
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
+N +++G+ N+ E + EM+ PN +++ + + +++ +
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 368 SIHGYVLRHQ-YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
H Y+LR Q Y + + N ++ YAK G + A+ VF+ MR RD V++TS+I GY
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH--GKELS 484
G + A+ F+ + R ++ D VT++++L A S + V+E H L + H G L
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH---SNLVREGHWLFTKMEHVFGIRLR 560
Query: 485 VN--NSLITTYAKCGKLNMARYLFQQMTERCLTSWNA-MLGAYAMHGN 529
+ + ++ Y + G L+ AR +F + ++ A +L A +HGN
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 160/615 (26%), Positives = 290/615 (47%), Gaps = 45/615 (7%)
Query: 124 VYGAFRIASTMQDQRLYPNRV--TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF 181
+Y AFR S ++ Q V + SLL G+ +H + I G D +
Sbjct: 62 LYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF-DSVL 120
Query: 182 ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR 241
L+ Y + A + N+ WN LI +Y+ N + E+ ++++M+ +
Sbjct: 121 VPKLVTFYSAFNLLDEAQTI--TENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 242 KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKA 300
+ D T + I +CA L +G+ +HG + ++ C AL+ +Y +F V A
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 301 RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF---------- 350
R++F+R+ +DAV +N ++ Y + EA + M V ++ +
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 351 -------------------------LNLISAVSDLRDIRLARSIHGYVLRHQYITRV--E 383
+N + A S + ++ + H V+R +
Sbjct: 299 GNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN 358
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
+ N +I Y++C L++A +VF ++ + L +W S+I+G+ ++ +E L + +
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMA 502
+ +TL S+L +++G L KE HC R K+ L + NSL+ YAK G++ A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 503 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 562
+ +F M +R ++ +++ Y G L F M IKPD +T ++L+ACSHS
Sbjct: 479 KRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 563 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 622
LV EG +F M + I HY+C++DL RAG L +A ++ ++P SSA T
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 623 LLSACRLYGDTEIGE-AIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKE 681
LL AC ++G+T IGE A K +L+ +P + Y+L++++ A G W ++ ++ + D
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 682 LKSTPGYSLIELDKQ 696
++ ++L+E D +
Sbjct: 659 VQKAHEFALMETDSE 673
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 200/432 (46%), Gaps = 46/432 (10%)
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAIL--SCAELDYLCHGKSIHGYMIRMGVEP 280
+ +GQ EAF F + ++ + + ++A L +C + G+ +H + I G+E
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 281 DMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
D V LV YS F++ +A+ + E + +NV++ Y++N E+++V+ M+
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 340 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 399
+ + + ++I A + L D R +HG + + + + N +I Y + G +
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 400 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE----------------- 442
AR +F+RM RD VSW ++I Y + EA F+LL R
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEA---FKLLDRMYLSGVEASIVTWNTIAG 293
Query: 443 ---------------------NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR--AFH 479
N+RI SV +I+ L+A S +G L K HCL R +F
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 539
+V NSLIT Y++C L A +FQQ+ L++WN+++ +A + E L
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKE 413
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M L P+ +T SIL + G ++ G + ++R + + +N ++D+ +++G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 600 QLTEAYNLVKSM 611
++ A + SM
Sbjct: 474 EIIAAKRVFDSM 485
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 208/447 (46%), Gaps = 54/447 (12%)
Query: 5 HPSITGNLVAS-CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVH 63
HP L+ S R + + E + Y + + D +K+C AL +G+ VH
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 64 ----VDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
V S + NL +V ++LI +Y +GK++ A R+FD ++ +D V++ +II Y
Sbjct: 208 GSIEVSSHRCNL----YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 120 ----------------------------GGSCV-----YGAFRIASTMQDQRLYPNRVTL 146
G C+ GA M++ + V +
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRR-GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 205
++ L A + +G+L+ G+ H IR F + +L+ MY +C ++ A VF ++
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 265
A S + +WN +I+ + +N ++ E L ++M+ P+ +TLA+ + A + L H
Sbjct: 384 EANS--LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 266 GKSIHGYMIRMGVEPD-MVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYL 323
GK H Y++R D ++ +LVD+Y+K ++ A+++F+ +R +D V Y ++ GY
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI---- 379
+ A+ F +M + + P+ + ++SA S L R H + +++
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS---HSNLVREGHWLFTKMEHVFGIR 558
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFN 406
R+E + ++ Y + GYL AR +F+
Sbjct: 559 LRLEHYSCMVDLYCRAGYLDKARDIFH 585
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 231/528 (43%), Gaps = 54/528 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L +CV G+++H I L D + L+ YS + L++A + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
+ + +I +Y + + + M + + + T S++ A A L GR +H
Sbjct: 150 LPWNVLIGSYIRNKR--FQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
G +I C+ L+ MY + G V +A +F +M+ SWN +I Y
Sbjct: 208 G-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV--SWNAIINCYTSEE 264
Query: 227 QALEAFELFRQMIHRKVLPDLLT-----------------------------------LA 251
+ EAF+L +M V ++T +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 252 NAILSCAELDYLCHGKSIHGYMIR---MGVEPDMVACTALVDLYSK-FDVTKARKMFERL 307
N + +C+ + L GK H +IR + D V +L+ +YS+ D+ A +F+++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQV 383
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
+N +++G+ N+ E + EM+ PN +++ + + +++ +
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 368 SIHGYVLRHQ-YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
H Y+LR Q Y + + N ++ YAK G + A+ VF+ MR RD V++TS+I GY
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH--GKELS 484
G + A+ F+ + R ++ D VT++++L A S + V+E H L + H G L
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH---SNLVREGHWLFTKMEHVFGIRLR 560
Query: 485 VN--NSLITTYAKCGKLNMARYLFQQMTERCLTSWNA-MLGAYAMHGN 529
+ + ++ Y + G L+ AR +F + ++ A +L A +HGN
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 234/455 (51%), Gaps = 45/455 (9%)
Query: 264 CHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGY 322
CH S+ G +I +P + + L L +F R + D ++N +
Sbjct: 36 CHDNSLFGKLIGHYCSKPSTESSSKLAHLL----------VFPRFGHPDKFLFNTL---- 81
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL---------RDIRLARSIHGYV 373
LK P ++I +F S + L+LN + V L +R+ R +HG V
Sbjct: 82 LKCSKPEDSIRIFANY----ASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMV 137
Query: 374 LRHQYITRVE-IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG----- 427
+ ++ E I ++H YAK G L+YAR VF+ M R V+W +MI GY H
Sbjct: 138 KKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNH 197
Query: 428 HIDEAIILFRLLQ--RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
+ +A++LFR +R T++ +L A+SQ G L VH + E+ V
Sbjct: 198 NARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDV 257
Query: 486 --NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
+L+ Y+KCG LN A +F+ M + + +W +M A++G E L N M
Sbjct: 258 FIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAES 317
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
IKP+E+TFTS+L+A H GLVEEG+++F+SM + + P HY CI+DLL +AG++ E
Sbjct: 318 GIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQE 377
Query: 604 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS-------SSYVL 656
AY + +MP + L +L +AC +YG+T +GE I K +L++E + YV
Sbjct: 378 AYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVA 437
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
+SN+LA G+W EV +R K++ +K+ PGYS +
Sbjct: 438 LSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 139 LYPNRVTLVSLL---HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
LY N T V +L +A +L+ GR +HG + GF E+ TTLL Y K G +
Sbjct: 104 LYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDL 163
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLH-----NGQALEAFELFRQM--IHRKVLPDLL 248
+ A VF +M ++ +WN +I Y N A +A LFR+ V P
Sbjct: 164 RYARKVFDEMPERTSV--TWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDT 221
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEP--DMVACTALVDLYSKFD-VTKARKMFE 305
T+ + + ++ L G +HGY+ ++G P D+ TALVD+YSK + A +FE
Sbjct: 222 TMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFE 281
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
++ K+ + M TG N E N+ + M + + PN F +L+SA
Sbjct: 282 LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 12/248 (4%)
Query: 56 LEFGKRVHVDSIKLN-LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIIT 114
L G+ VH KL L +G++L+ Y++ G L A +VFDE+ + V + ++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 115 AYAHSGGSCVYGA------FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGY 168
Y + A FR S + P T+V +L A ++ G L+ G +HGY
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSG-VRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 169 AIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 227
+ GF ++F T L+DMY KCG + A +VF M + V +W + NG+
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN--VFTWTSMATGLALNGR 303
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACT 286
E L +M + P+ +T + + + + + G + M R GV P +
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 287 ALVDLYSK 294
+VDL K
Sbjct: 364 CIVDLLGK 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 45 LCLKSCVA-LGRLEFGKRVH--VDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEI 101
+C+ S ++ G LE G VH ++ + D F+G++L+ +YS+ G L +A VF+ +
Sbjct: 224 VCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELM 283
Query: 102 TNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQE 161
K++ +TS+ T A +G + + M + + PN +T SLL A +G ++E
Sbjct: 284 KVKNVFTWTSMATGLALNGRG--NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEE 341
Query: 162 GRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMA 198
G + +++ FGV I ++D+ K G ++ A
Sbjct: 342 GIELF-KSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 196/663 (29%), Positives = 303/663 (45%), Gaps = 109/663 (16%)
Query: 137 QRLYPNRVT-LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
QR NRV SLL AK G L E R + R C+ +L Y KC +
Sbjct: 70 QRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN-----AMLTGYVKCRRM 124
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
A +F +M V SW ++ A +G++ +A ELF +M R V+ TL ++
Sbjct: 125 NEAWTLFREM---PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV-SWNTLVTGLI 180
Query: 256 SCAEL-------------DYLCHGKSIHGYMIRMGVE-----------PDMVACTALVDL 291
++ D + I GY+ G+E ++V T++V
Sbjct: 181 RNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYG 240
Query: 292 YSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM--SVSPNVA 348
Y ++ DV +A ++F + ++ V + M++G+ N+L EA+ +F EM K +VSPN
Sbjct: 241 YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 349 LFLNLISAVSDL--RDIRLARSIHGYV-----------------LRHQYITRVEIA---- 385
++L A L RL +H V L H Y + IA
Sbjct: 301 TLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQS 360
Query: 386 -----------NQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGHIDEAI 433
N II+ Y K G L+ A +F R++S D VSWTSMI GY+ G + A
Sbjct: 361 LLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAF 420
Query: 434 ILFRLLQRENLRIDSVTLISLLQA----------------------------LSQLGCLS 465
LF+ L ++ +V + L+Q LS G S
Sbjct: 421 GLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 466 AV---KEVHCLTYR--AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 520
+ K +HC+ + A + +L + NSL++ YAKCG + A +F +M ++ SWN+M
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM 540
Query: 521 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 580
+ + HG + L LF M KP+ +TF +L+ACSHSGL+ GL++F++M Y+
Sbjct: 541 IMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYS 600
Query: 581 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 640
I PG HY +IDLL RAG+L EA + ++P T LL C L + E IA
Sbjct: 601 IQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIA 660
Query: 641 K----QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
+ ++L+L+P N+ +V + N+ A GR D +R K +K TPG S + ++ +
Sbjct: 661 ERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGR 720
Query: 697 REV 699
V
Sbjct: 721 ANV 723
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 221/497 (44%), Gaps = 101/497 (20%)
Query: 54 GRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSII 113
G +E K+V D++ + D +++I+ Y E +E+A +F +++ K++V +TS++
Sbjct: 183 GDMEKAKQV-FDAMP---SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMV 238
Query: 114 TAYAHSGGSCVYGAFRIASTMQDQRLY--------------------------------- 140
Y G V A+R+ M ++ +
Sbjct: 239 YGYCRYGD--VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVS 296
Query: 141 PNRVTLVSLLHAAAKLGS--LQEGRAIHGYAIRRGFGVCDEI--FETTLLDMYHKCGGVK 196
PN TL+SL +A LG + G +H I G+ D +L+ MY G +
Sbjct: 297 PNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIA 356
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A ++ + S + S N +I YL NG A LF ++
Sbjct: 357 SAQSLLNE----SFDLQSCNIIINRYLKNGDLERAETLFERV------------------ 394
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIY 315
KS+H D V+ T+++D Y DV++A +F++L +KD V +
Sbjct: 395 ----------KSLH----------DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTW 434
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
VM++G ++N+L EA ++ +M++ + P + + L+S+ ++ + IH + +
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAK 494
Query: 376 HQ--YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
Y + + N ++ YAKCG ++ A +F +M +D VSW SMI G HHG D+A+
Sbjct: 495 TTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKAL 554
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLS-------AVKEVHCLTYRAFHGKELSVN 486
LF+ + + +SVT + +L A S G ++ A+KE TY G + +
Sbjct: 555 NLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE----TYSIQPGIDHYI- 609
Query: 487 NSLITTYAKCGKLNMAR 503
S+I + GKL A
Sbjct: 610 -SMIDLLGRAGKLKEAE 625
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 425
AR + + + I RV ++ YAK GYL AR++F M R++V+ +M+TGYV
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 426 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
++EA LFR + + + V+ +L AL C E + + +
Sbjct: 121 CRRMNEAWTLFREMPK-----NVVSWTVMLTAL----CDDGRSEDAVELFDEMPERNVVS 171
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
N+L+T + G + A+ +F M R + SWNAM+ Y + E LF M N+
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 546 KPDELTFTSILTACSHSGLVEEGLQIFRSM 575
+T+TS++ G V E ++F M
Sbjct: 232 ----VTWTSMVYGYCRYGDVREAYRLFCEM 257
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 41 SAITLCLKSCVALGRLEFGKRVHVDSIKLN--LNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
S ++ L S A L+ GK +H K + D + +SL+ +Y++ G +EDA+ +F
Sbjct: 467 STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF 526
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
++ KD V++ S+I +H G A + M D PN VT + +L A + G
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHG--LADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 159 LQEGRAI-----HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
+ G + Y+I+ G +++D+ + G +K A
Sbjct: 585 ITRGLELFKAMKETYSIQPGID-----HYISMIDLLGRAGKLKEA 624
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 244/479 (50%), Gaps = 46/479 (9%)
Query: 257 CAELDYLCHGKSIHGYMIRMGVE--PDMVACTALVDLY-SKFDVTKARKMFER--LRNKD 311
CA +L GK +H + G++ P AL Y S ++ A+K+F+ L KD
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
V + +++ + + L V ++ +F EM + V + + L + L D+ A+ HG
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGY-------------------------------LQY 400
++ +T V++ N ++ Y KCG L+
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI-ILFRLLQRENLRIDSVTLISLLQALS 459
R VF+ M R+ V+WT M+ GY+ G E + +L ++ R ++ VTL S+L A +
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACA 255
Query: 460 QLGCLSAVKEVH--CLTYRAFHGKELS-----VNNSLITTYAKCGKLNMARYLFQQMTER 512
Q G L + VH L G+E S V +L+ YAKCG ++ + +F+ M +R
Sbjct: 256 QSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 513 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 572
+ +WNA+ AMHG V+ +F M + +KPD+LTFT++L+ACSHSG+V+EG + F
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 573 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 632
S+ R Y + P HY C++DLL RAG + EA L++ MP + L +LL +C ++G
Sbjct: 375 HSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGK 433
Query: 633 TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
EI E I ++++++ P N+ +L+SN+ GR D +R + + ++ PG S I
Sbjct: 434 VEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 200/487 (41%), Gaps = 83/487 (17%)
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNA 207
LL A L+ G+ +H G + L Y G + A +F ++
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 208 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
+ W L++++ G + + +LF +M ++V D +++ CA+L+ L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK---------------- 310
HG ++MGV + C AL+D+Y K V++ +++FE L K
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 311 ---------------DAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLI 354
+AV + VM+ GYL E + + EM+ + N +++
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVE-------IANQIIHTYAKCGYLQYARLVFNR 407
SA + ++ + R +H Y L+ + + E + ++ YAKCG + + VF
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
MR R++V+W ++ +G HG I +F + RE ++ D +T ++L A S G +
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVD-- 368
Query: 468 KEVHCLTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA 525
+ C F+G E V++ ++ + G + A L ++M
Sbjct: 369 EGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP--------------- 413
Query: 526 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 585
+ P+E+ S+L +CS G VE +I R +I+ + PG
Sbjct: 414 -------------------VPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ---MSPGN 451
Query: 586 VHYNCII 592
Y ++
Sbjct: 452 TEYQILM 458
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 141/318 (44%), Gaps = 39/318 (12%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
++ +++++ + +D ++ C L L F ++ H ++K+ + + V ++L+ +
Sbjct: 96 MKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDM 155
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG--------------------SCV 124
Y + G + + R+F+E+ K +V++T ++ G V
Sbjct: 156 YGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMV 215
Query: 125 YGAFRIASTMQDQRLYP----------NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF 174
G T + L N VTL S+L A A+ G+L GR +H YA+++
Sbjct: 216 AGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEM 275
Query: 175 GVCDE------IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQA 228
+ +E + T L+DMY KCG + + VF M + V +WN L + +G+
Sbjct: 276 MMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN--VVTWNALFSGLAMHGKG 333
Query: 229 LEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 288
++F QMI R+V PD LT + +C+ + G + G+EP + +
Sbjct: 334 RMVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACM 392
Query: 289 VDLYSKFDVTKARKMFER 306
VDL + + + ++ R
Sbjct: 393 VDLLGRAGLIEEAEILMR 410
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 247/482 (51%), Gaps = 10/482 (2%)
Query: 212 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
V SWN +I+ + G A +LF +M R V+ + N ++D
Sbjct: 97 VVSWNSMISGCVECGDMNTAVKLFDEMPERSVV-SWTAMVNGCFRSGKVD------QAER 149
Query: 272 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 330
+M V+ D A ++V Y +F V A K+F+++ K+ + + M+ G +N+ E
Sbjct: 150 LFYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 331 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
A+++F M++ + F +I+A ++ + +HG +++ ++ ++ +I
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 391 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVT 450
YA C + +R VF+ + WT++++GY + ++A+ +F + R ++ + T
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 451 LISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT 510
S L + S LG L KE+H + + + V NSL+ Y+ G +N A +F ++
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 511 ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ 570
++ + SWN+++ A HG +F M N +PDE+TFT +L+ACSH G +E+G +
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 571 IFRSMIREYTIVPGEV-HYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRL 629
+F M + ++ HY C++D+L R G+L EA L++ M + LLSACR+
Sbjct: 449 LFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRM 508
Query: 630 YGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 689
+ D + GE A I L+ ++S++YVL+SNI A GRW V+ +R K + PG S
Sbjct: 509 HSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSS 568
Query: 690 LI 691
+
Sbjct: 569 WV 570
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 207/458 (45%), Gaps = 23/458 (5%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
+ +I Y+ +L DA +FDE+ +D+V++ S+I+ G G A + D+
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMIS------GCVECGDMNTAVKLFDEM 123
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
+ V+ ++++ G + G+ + V D +++ Y + G V A
Sbjct: 124 PERSVVSWTAMVN-----GCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDA 178
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F +M V SW +I N ++ EA +LF+ M+ + I +CA
Sbjct: 179 LKLFKQM--PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNV 317
G +HG +I++G + +L+ Y+ + +RK+F+ ++ ++
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTA 296
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
+++GY N +A+++F M++ S+ PN + F + +++ S L + + +HG ++
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG 356
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
T + N ++ Y+ G + A VF ++ + +VSW S+I G HG A ++F
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG-----KELSVNNSLITT 492
+ R N D +T LL A S G L ++ L Y G +++ ++
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRK---LFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 493 YAKCGKLNMARYLFQQMTERC-LTSWNAMLGAYAMHGN 529
+CGKL A L ++M + W A+L A MH +
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 172/364 (47%), Gaps = 11/364 (3%)
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST 133
D +S++ Y ++GK++DA ++F ++ K+++++T++I + S A +
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG--EALDLFKN 215
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
M + ++ A A + G +HG I+ GF + +E +L+ Y C
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF-LYEEYVSASLITFYANCK 274
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
+ + VF + V W L++ Y N + +A +F M+ +LP+ T A+
Sbjct: 275 RIGDSRKVFDE--KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 312
+ SC+ L L GK +HG +++G+E D +LV +YS +V A +F ++ K
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
V +N ++ G ++ A +F +MI+++ P+ F L+SA S + R + Y
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 373 VLRH-QYITR-VEIANQIIHTYAKCGYLQYARLVFNRM--RSRDLVSWTSMITGYVHHGH 428
+ +I R ++ ++ +CG L+ A + RM + ++V W ++++ H
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMV-WLALLSACRMHSD 511
Query: 429 IDEA 432
+D
Sbjct: 512 VDRG 515
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 196/423 (46%), Gaps = 48/423 (11%)
Query: 260 LDYLCHGKSIHGYMIRMGVEP-DMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVM 318
+ ++ HGK + + + + +++ C L+ + +AR++F ++ + +Y M
Sbjct: 17 ISHVIHGKCYRSFSVTVEFQNREVLICNHLLSR----RIDEAREVFNQVPSPHVSLYTKM 72
Query: 319 MTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLA---------RS 368
+TGY +++ V+A+N+F EM ++ VS N ++IS + D+ A RS
Sbjct: 73 ITGYTRSNRLVDALNLFDEMPVRDVVSWN-----SMISGCVECGDMNTAVKLFDEMPERS 127
Query: 369 IHGYV------LRHQYITRVE------------IANQIIHTYAKCGYLQYARLVFNRMRS 410
+ + R + + E N ++H Y + G + A +F +M
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
++++SWT+MI G + EA+ LF+ + R ++ S ++ A + +V
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 530
H L + E V+ SLIT YA C ++ +R +F + + W A+L Y+++ +
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 531 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR---EYTIVPGEVH 587
+ L +F+ M +I P++ TF S L +CS G ++ G ++ ++ E G
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG--- 364
Query: 588 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL- 646
N ++ + S +G + +A ++ + S + +++ C +G + I Q+++L
Sbjct: 365 -NSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 647 -EP 648
EP
Sbjct: 423 KEP 425
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 5/252 (1%)
Query: 22 GEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSL 81
GE L + ++ T + +C G +VH IKL + +V +SL
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL 266
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYP 141
I Y+ ++ D+ +VFDE ++ + +T++++ Y+ + A I S M + P
Sbjct: 267 ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH--EDALSIFSGMLRNSILP 324
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
N+ T S L++ + LG+L G+ +HG A++ G D +L+ MY G V A +V
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET-DAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F K+ S SWN +I +G+ AF +F QMI PD +T + +C+
Sbjct: 384 FIKIFKKSIV--SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG 441
Query: 262 YLCHGKSIHGYM 273
+L G+ + YM
Sbjct: 442 FLEKGRKLFYYM 453
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 5/161 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L SC ALG L++GK +H ++KL L +D FVG+SL+ +YS+ G + DA VF +I K +
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
V++ SII A G AF I M P+ +T LL A + G L++GR +
Sbjct: 393 VSWNSIIVGCAQHGRG--KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF 450
Query: 167 GYAIRRGFGVCDEIFE--TTLLDMYHKCGGVKMAAAVFGKM 205
Y + G D + T ++D+ +CG +K A + +M
Sbjct: 451 -YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 227/414 (54%), Gaps = 4/414 (0%)
Query: 281 DMVACTALVDLYSKFD--VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 338
++V + LV YSK + + +F + ++ +N+++ + ++ ++I++F M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 339 IKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 397
+ S V P+ ++ A S R+ + IH L+ + + + +++ ++ Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 398 LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
L +AR +F+ M RD V +T+M GYV G + +FR + +DSV ++SLL A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 458 LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSW 517
QLG L K VH R L++ N++ Y KC L+ A +F M+ R + SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
++++ Y + G+ KLF+ M I+P+ +TF +L+AC+H GLVE+ FR +++
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFR-LMQ 363
Query: 578 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 637
EY IVP HY + D +SRAG L EA ++ MP A + +LS C++YG+ E+GE
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 638 AIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
+A+++++L+PR +S YV ++ + + GR+DE +R K+K++ PG S I
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 180/405 (44%), Gaps = 48/405 (11%)
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGY 272
SWN +I + +G A ++ +LF +M V PD TL + +C+ G IH
Sbjct: 100 SWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVL 159
Query: 273 MIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 331
+++G + +ALV +Y + ARK+F+ + +D+V+Y M GY++ +
Sbjct: 160 CLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLG 219
Query: 332 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
+ +F EM + + + ++L+ A L ++ +S+HG+ +R + + N I
Sbjct: 220 LAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDM 279
Query: 392 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 451
Y KC L YA VF M RD++SW+S+I GY G + + LF + +E + ++VT
Sbjct: 280 YVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTF 339
Query: 452 ISLLQALSQLGCLSAVKEVHCLTYRAFHG----KELSVNNSLITTYAKCGKLNMARYLFQ 507
+ +L A + G + E L +R EL S+ ++ G L A +
Sbjct: 340 LGVLSACAHGGLV----EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLE 395
Query: 508 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE 567
M +KPDE ++L+ C G VE
Sbjct: 396 DMP----------------------------------VKPDEAVMGAVLSGCKVYGNVEV 421
Query: 568 GLQIFRSMIREYTIVPGEV-HYNCIIDLLSRAGQLTEAYNLVKSM 611
G ++ R +I+ + P + +Y + L S AG+ EA +L + M
Sbjct: 422 GERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 15/225 (6%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D + L L++C A + G +HV +KL +S FV S+L+ +Y + GKL A ++F
Sbjct: 133 DDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLF 192
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCV-YGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG 157
D++ +D V YT++ Y G + + FR M + V +VSLL A +LG
Sbjct: 193 DDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFR---EMGYSGFALDSVVMVSLLMACGQLG 249
Query: 158 SLQEGRAIHGYAIRR----GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVG 213
+L+ G+++HG+ IRR G + + I DMY KC + A VF +N + V
Sbjct: 250 ALKHGKSVHGWCIRRCSCLGLNLGNAI-----TDMYVKCSILDYAHTVF--VNMSRRDVI 302
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
SW+ LI Y +G + +F+LF +M+ + P+ +T + +CA
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA 347
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 138/292 (47%), Gaps = 14/292 (4%)
Query: 71 LNSDCFVGSSLIRLYSEYGKL-EDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFR 129
L S+ + S L+ YS+ L + VF + +++ ++ II ++ SG + +
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSG----FASKS 117
Query: 130 IASTMQDQR---LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTL 185
I ++ R + P+ TL +L A + + G IH ++ GF +F + L
Sbjct: 118 IDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFS--SSLFVSSAL 175
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
+ MY G + A +F M + + + + Y+ G+A+ +FR+M +
Sbjct: 176 VIMYVDMGKLLHARKLFDDMPVRDSVL--YTAMFGGYVQQGEAMLGLAMFREMGYSGFAL 233
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMF 304
D + + + +++C +L L HGKS+HG+ IR + A+ D+Y K + A +F
Sbjct: 234 DSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVF 293
Query: 305 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+ +D + ++ ++ GY + V + +F EM+K + PN FL ++SA
Sbjct: 294 VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIK----LNLNSDCFVGSS 80
L + ++ S F+LD + L +C LG L+ GK VH I+ L LN +G++
Sbjct: 220 LAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN----LGNA 275
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
+ +Y + L+ AH VF ++ +D+++++S+I Y G V +F++ M + +
Sbjct: 276 ITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGD--VVMSFKLFDEMLKEGIE 333
Query: 141 PNRVTLVSLLHAAAKLGSLQE 161
PN VT + +L A A G +++
Sbjct: 334 PNAVTFLGVLSACAHGGLVEK 354
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 258/505 (51%), Gaps = 47/505 (9%)
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
+ +A + +M + V +N L ++ + + EL+ +M+ V P T ++ +
Sbjct: 821 LDLAVSTMTQMQEPNVFV--YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLV 878
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAV 313
+ + G+S+ ++ + G + T L+D YS + +ARK+F+ + +D +
Sbjct: 879 KASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDI 936
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+ M++ Y + L++ SA S
Sbjct: 937 AWTTMVSAYRR-------------------------VLDMDSANS--------------- 956
Query: 374 LRHQYITRVE-IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 432
L +Q + E +N +I+ Y G L+ A +FN+M +D++SWT+MI GY + EA
Sbjct: 957 LANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 1016
Query: 433 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 492
I +F + E + D VT+ +++ A + LG L KEVH T + ++ + ++L+
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 493 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
Y+KCG L A +F + ++ L WN+++ A HG E LK+F M++ ++KP+ +TF
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 553 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
S+ TAC+H+GLV+EG +I+RSMI +Y+IV HY ++ L S+AG + EA L+ +M
Sbjct: 1137 VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 672
++ LL CR++ + I E +++ LEP NS Y L+ ++ AE RW +VA
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAE 1256
Query: 673 IRAMTKDKEL-KSTPGYSLIELDKQ 696
IR ++ + K PG S I +DK+
Sbjct: 1257 IRGRMRELGIEKICPGTSSIRIDKR 1281
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 174/385 (45%), Gaps = 47/385 (12%)
Query: 58 FGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA 117
FG+ + K + ++LI YS G++ +A +VFDE+ +D +A+T++++AY
Sbjct: 887 FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR 946
Query: 118 HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC 177
A+++ +Q N T L++ LG+L++
Sbjct: 947 R------VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQ---------------- 984
Query: 178 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
A ++F +M + SW +I Y N + EA +F +
Sbjct: 985 --------------------AESLFNQMPVKD--IISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 238 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FD 296
M+ ++PD +T++ I +CA L L GK +H Y ++ G D+ +ALVD+YSK
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+ +A +F L K+ +N ++ G + EA+ +F +M SV PN F+++ +A
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 357 VSDLRDIRLARSIH-GYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLV 414
+ + R I+ + + ++ VE ++H ++K G + A L+ N + V
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV 1202
Query: 415 SWTSMITGYVHHGHIDEAIILFRLL 439
W +++ G H ++ A I F L
Sbjct: 1203 IWGALLDGCRIHKNLVIAEIAFNKL 1227
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
+ + Y E + + + D ++ + +C LG LE GK VH+ +++ D +
Sbjct: 1009 QNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY 1068
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
+GS+L+ +YS+ G LE A VF + K+L + SII A G A ++ + M+
Sbjct: 1069 IGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG--FAQEALKMFAKMEM 1126
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
+ + PN VT VS+ A G + EGR I+ I V + ++ ++ K G +
Sbjct: 1127 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 1186
Query: 197 MAAAVFGKMNATSTTVGSWNPLI 219
A + G M V W L+
Sbjct: 1187 EALELIGNMEFEPNAV-IWGALL 1208
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 40/250 (16%)
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
+ NQ I L A +M+ ++ + ++ G+V H ++ L+ + R++
Sbjct: 807 LMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDS 866
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLITTYAKCGKLNMA 502
+ S T SL++A S + H + FH K + +LI Y+ G++ A
Sbjct: 867 VSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVK---IQTTLIDFYSATGRIREA 923
Query: 503 RYLFQQMTERCLTSWNAMLGAYAM-------------------------------HGNYA 531
R +F +M ER +W M+ AY GN
Sbjct: 924 RKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLE 983
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
+ LFN M + +I +++T+++ S + E + +F M+ E I+P EV + +
Sbjct: 984 QAESLFNQMPVKDI----ISWTTMIKGYSQNKRYREAIAVFYKMMEE-GIIPDEVTMSTV 1038
Query: 592 IDLLSRAGQL 601
I + G L
Sbjct: 1039 ISACAHLGVL 1048
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 221/430 (51%), Gaps = 33/430 (7%)
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM--SVSPNVALFLNLISAV 357
A ++ +R N M+ + K+ +P ++ + + ++ + P+ L+ A
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA------------------------ 393
+ LR +HG +R + + +I YA
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 394 -------KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 446
+CG + +AR +F M RD ++W +MI+GY G EA+ +F L+Q E +++
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
+ V +IS+L A +QLG L + H R + + +L+ YAKCG + A +F
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 507 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 566
M E+ + +W++ L AM+G + L+LF+ MK + P+ +TF S+L CS G V+
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 567 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
EG + F SM E+ I P HY C++DL +RAG+L +A ++++ MP +A +LL A
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 627 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTP 686
R+Y + E+G +K++L+LE N +YVL+SNI A+ WD V+H+R K K ++ P
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 687 GYSLIELDKQ 696
G S++E++ +
Sbjct: 479 GCSVMEVNGE 488
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 173/360 (48%), Gaps = 38/360 (10%)
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH--RKVLPDLLTLANAILSCAELDYLC 264
+ T+ + N +I A+ + ++F+ +R+++ + PD T+ + +C L
Sbjct: 66 SEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRE 125
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKF----------------------------- 295
G +HG IR G + D T L+ LY++
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 296 ---DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
DV ARK+FE + +D + +N M++GY + EA+NVFH M V N ++
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 412
++SA + L + R H Y+ R++ V +A ++ YAKCG ++ A VF M ++
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 413 LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC 472
+ +W+S + G +G ++ + LF L++++ + ++VT +S+L+ S +G + + H
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HF 364
Query: 473 LTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGN 529
+ R G E + + L+ YA+ G+L A + QQM + + W+++L A M+ N
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKN 424
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 38/304 (12%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y +L DLK ++ + +++C L E G +VH +I+ ++D V +
Sbjct: 94 YRRILSSGNDLKPDNYT-----VNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTG 148
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-------------------- 120
LI LY+E G L+ H+VF+ I D V T+++TA A G
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 121 -----GSCVYG----AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR 171
G G A + MQ + + N V ++S+L A +LG+L +GR H Y R
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 172 RGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEA 231
+ + TTL+D+Y KCG ++ A VF M V +W+ + NG +
Sbjct: 269 NKIKITVRL-ATTLVDLYAKCGDMEKAMEVFWGME--EKNVYTWSSALNGLAMNGFGEKC 325
Query: 232 FELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVD 290
ELF M V P+ +T + + C+ + ++ G+ M G+EP + LVD
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVD 385
Query: 291 LYSK 294
LY++
Sbjct: 386 LYAR 389
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 397 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR--LLQRENLRIDSVTLISL 454
YL YA + +R L + SMI + +++ +R L +L+ D+ T+ L
Sbjct: 55 YLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 455 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA-------------------- 494
+QA + L +VH +T R + V LI+ YA
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 495 -----------KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
+CG + AR LF+ M ER +WNAM+ YA G E L +F+ M+L
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
+K + + S+L+AC+ G +++G + S I I ++DL ++ G + +
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 604 AYNLVKSM 611
A + M
Sbjct: 294 AMEVFWGM 301
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 224/425 (52%), Gaps = 33/425 (7%)
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
A ++F ++N + +++N M+ Y P+E+++ F M + + + L+ + S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
L D+R + +HG ++R + +I ++ Y G + A+ VF+ M R++V W M
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 420 ITGYVHHGHIDEAIILFRLL--------------------QRENLRI-----------DS 448
I G+ G ++ + LF+ + RE L + D
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 449 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQ 507
T++++L + LG L K +H + K+ ++V N+L+ Y K G L A +F+
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 508 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVE 566
+M R + SWN ++ A++G + LF+ M + G + P+E TF +L CS++G VE
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 567 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
G ++F M+ + + HY ++DL+SR+G++TEA+ +K+MP ++A +LLSA
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 627 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTP 686
CR +GD ++ E A +++K+EP NS +YVL+SN+ AE GRW +V +R + K L+ +
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKST 474
Query: 687 GYSLI 691
G S I
Sbjct: 475 GQSTI 479
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 37/370 (10%)
Query: 94 AHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAA 153
A+RVF I N +++ + ++I Y+ G +F S+M+ + ++ + T LL +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSF--FSSMKSRGIWADEYTYAPLLKSC 112
Query: 154 AKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVG 213
+ L L+ G+ +HG IR GF +I ++++Y G + A VF +M+ + V
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKI-RIGVVELYTSGGRMGDAQKVFDEMSERNVVVW 171
Query: 214 -----------------------------SWNPLIAAYLHNGQALEAFELFRQMIHRKVL 244
SWN +I++ G+ EA ELF +MI +
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 245 PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC-TALVDLYSKF-DVTKARK 302
PD T+ + A L L GK IH G+ D + ALVD Y K D+ A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLR 361
+F +++ ++ V +N +++G N I++F MI+ V+PN A FL +++ S
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 362 DIRLARSIHGYVL-RHQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSM 419
+ + G ++ R + R E ++ ++ G + A + + N + + W S+
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 420 ITGYVHHGHI 429
++ HG +
Sbjct: 412 LSACRSHGDV 421
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 162/359 (45%), Gaps = 39/359 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
LKSC +L L FGK VH + I+ + + ++ LY+ G++ DA +VFDE++ +++
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 107 VAYTSIITAYAHSGG--------------SCVYGAFRIAS---------------TMQDQ 137
V + +I + SG S V I+S M DQ
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 197
P+ T+V++L +A LG L G+ IH A G L+D Y K G ++
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 198 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILS 256
A A+F KM V SWN LI+ NG+ +LF MI KV P+ T +
Sbjct: 289 ATAIFRKMQ--RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLAC 346
Query: 257 CAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NKDAV 313
C+ + G+ + G M+ R +E A+VDL S+ +T+A K + + N +A
Sbjct: 347 CSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAA 406
Query: 314 IYNVMMTGYLKN-DLPVEAINVFHEMIKMSV--SPNVALFLNLISAVSDLRDIRLARSI 369
++ +++ + D+ + + E++K+ S N L NL + +D+ R++
Sbjct: 407 MWGSLLSACRSHGDVKLAEVAAM-ELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTL 464
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 162/374 (43%), Gaps = 48/374 (12%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
+N +I Y G LE+ F M R + D T A + SC+ L L GK +HG +I
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 275 RMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYL---------- 323
R G +V+LY S + A+K+F+ + ++ V++N+M+ G+
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 324 ---------------------KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
K EA+ +F EMI P+ A + ++ + L
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 363 IRLARSIHGYV----LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
+ + IH L +IT + N ++ Y K G L+ A +F +M+ R++VSW +
Sbjct: 250 LDTGKWIHSTAESSGLFKDFIT---VGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNT 306
Query: 419 MITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
+I+G +G + I LF +++ + + T + +L S G + +E+ L
Sbjct: 307 LISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
Query: 478 FHGKELSVN-NSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGNY--AEV 533
F + + + +++ ++ G++ A + M + W ++L A HG+ AEV
Sbjct: 367 FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEV 426
Query: 534 LKLFNHMKLGNIKP 547
M+L I+P
Sbjct: 427 AA----MELVKIEP 436
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 138/306 (45%), Gaps = 23/306 (7%)
Query: 369 IHGYVLRHQYITRVEIANQII-HTYAKCGYL---QYARLVFNRMRSRDLVSWTSMITGYV 424
IH ++LRH + +N ++ H + CG L YA VF+ +++ +++ + +MI Y
Sbjct: 23 IHAHLLRH----FLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 484
G E++ F ++ + D T LL++ S L L K VH R +
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 485 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 544
+ ++ Y G++ A+ +F +M+ER + WN M+ + G+ L LF M +
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 545 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 604
I +++ S++++ S G E L++F MI + P E ++ + + G L
Sbjct: 199 I----VSWNSMISSLSKCGRDREALELFCEMI-DQGFDPDEATVVTVLPISASLGVLDTG 253
Query: 605 YNLVKSMPSTHSSAALCTLLSA-----CRLYGDTEIGEAIAKQILKLEPRNSSSY-VLIS 658
+ + S+ T+ +A C+ GD E AI + K++ RN S+ LIS
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCK-SGDLEAATAIFR---KMQRRNVVSWNTLIS 309
Query: 659 NILAEG 664
G
Sbjct: 310 GSAVNG 315
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 243/466 (52%), Gaps = 38/466 (8%)
Query: 269 IHGYMIRMGV---EPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
IH +I +G+ EP + + L S DV A K +L + +N ++ G+ +
Sbjct: 27 IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 86
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
P ++I+V+ +M++ + P+ + L+ + S L + +L S+H V++ + I
Sbjct: 87 RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFIC 146
Query: 386 NQIIH-------------------------------TYAKCGYLQYARLVFNRMRSRDLV 414
N +IH YAK G + ARLVF+ M RD+V
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 415 SWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
+W+SMI GYV G ++A+ +F ++++ + + + VT++S++ A + LG L+ K VH
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGNYA 531
+ + SLI YAKCG + A +F + + E WNA++G A HG
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 532 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
E L+LF+ M+ I PDE+TF +L ACSH GLV+E F+S+ +E P HY C+
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACM 385
Query: 592 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 651
+D+LSRAG + +A++ + MP + + L LL+ C +G+ E+ E + K++++L+P N
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 652 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQR 697
YV ++N+ A ++ +R + K +K G+S+++LD R
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTR 491
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 31/283 (10%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
+KS L + G +H +K L D F+ ++LI +Y + A ++FDE+ +K+L
Sbjct: 115 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 174
Query: 107 VAYTSIITAYAHSG-------------------------GSCVYGAFRIASTMQDQRL-- 139
V + SI+ AYA SG G G + A + DQ +
Sbjct: 175 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 234
Query: 140 ---YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
N VT+VS++ A A LG+L G+ +H Y + + I +T+L+DMY KCG +
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLT-VILQTSLIDMYAKCGSIG 293
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A +VF + + T WN +I +G E+ +LF +M K+ PD +T + +
Sbjct: 294 DAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 353
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK 299
C+ + + G EP +VD+ S+ + K
Sbjct: 354 CSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVK 396
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 38/341 (11%)
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTL-LDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 216
S+ E IH I G + TL G V A K++ WN
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNY--GWN 77
Query: 217 PLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 276
+I + ++ ++ ++ QM+ +LPD +T + S + L G S+H +++
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 277 GVEPDMVACTALVDLYSKF--------------------------------DVTKARKMF 304
G+E D+ C L+ +Y F DV AR +F
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 305 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDI 363
+ + +D V ++ M+ GY+K +A+ +F +M++M S N +++I A + L +
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL 257
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR--MRSRDLVSWTSMIT 421
+++H Y+L V + +I YAKCG + A VF R ++ D + W ++I
Sbjct: 258 NRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
G HG I E++ LF ++ + D +T + LL A S G
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 234/451 (51%), Gaps = 16/451 (3%)
Query: 252 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKD 311
N I C L L K IH +I +G+ + L+ L S ++ A + ++ N
Sbjct: 14 NLISKCKSLQNL---KQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPS 70
Query: 312 AVIYNVMMTGYLKNDLPVE---AINVFHEMIKMS---VSPNVALFLNLISAVS-DLRDIR 364
+YN +++ + N + A +++ +++ V PN + +L A D + R
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 365 LARSIHGYVLRHQYITRVE----IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 420
R++H +VL+ ++ V + ++ YA CG L+ AR +F R+R DL +W +++
Sbjct: 131 HGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLL 188
Query: 421 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 480
Y + ID + L R +R + ++L++L+++ + LG H +
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
V SLI Y+KCG L+ AR +F +M++R ++ +NAM+ A+HG E ++L+ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
+ PD TF ++ACSHSGLV+EGLQIF SM Y I P HY C++DLL R+G+
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 601 LTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNI 660
L EA +K MP ++ + L + + +GD E GE K +L LE NS +YVL+SNI
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 661 LAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
A RW +V R + KD + +PG S +
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 24/409 (5%)
Query: 46 CLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD 105
CL L+ K++H I + L+ + S L+ L S L A + +I N
Sbjct: 12 CLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPS 70
Query: 106 LVAYTSIITAYAHSGGSC-VYGAFRIASTMQDQR---LYPNRVTLVSLLHAAAKLGSL-Q 160
+ Y ++I++ + S + AF + + R + PN T SL A+ +
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 161 EGRAIHGYAIRRGFGVC-DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI 219
GRA+H + ++ V D + L+ Y CG ++ A ++F ++ + +WN L+
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPD--LATWNTLL 188
Query: 220 AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE 279
AAY ++ + E+ + +V P+ L+L I SCA L G H Y+++ +
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 280 PDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 338
+ T+L+DLYSK ++ ARK+F+ + +D YN M+ G + E I ++ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 339 IKMSVSPNVALFLNLISAVS-------DLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
I + P+ A F+ ISA S L+ ++++G +VE ++
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIE------PKVEHYGCLVDL 362
Query: 392 YAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHIDEAIILFRLL 439
+ G L+ A +M + + W S + HG + I + L
Sbjct: 363 LGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHL 411
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 240/477 (50%), Gaps = 2/477 (0%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
WN +I AY Q LF Q++ PD T A +E + IHG I
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAI 133
Query: 275 RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
G+ D + +A+V YSK + +A K+F + + D ++NVM+ GY + IN
Sbjct: 134 VSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGIN 193
Query: 334 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
+F+ M PN + L S + D + +A S+H + L+ + + +++ Y+
Sbjct: 194 LFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYS 253
Query: 394 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 453
+C + A VFN + DLV+ +S+ITGY G+ EA+ LF L+ + D V +
Sbjct: 254 RCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 454 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
+L + ++L + KEVH R ++ V ++LI Y+KCG L A LF + E+
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
+ S+N+++ +HG + + F + + PDE+TF+++L C HSGL+ +G +IF
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 633
M E+ I P HY ++ L+ AG+L EA+ V S+ S L LLS C ++ +T
Sbjct: 434 RMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENT 493
Query: 634 EIGEAIAKQILK-LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 689
+ E +A+ I K E R S V++SN+ A GRWDEV +R + PG S
Sbjct: 494 HLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 182/412 (44%), Gaps = 6/412 (1%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
+++H K L D + + L R Y+ L A ++FD + + + SII AYA +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
+ D R P+ T L ++ + R IHG AI G G D+
Sbjct: 85 HQFTTVLSLFSQILRSDTR--PDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF-DQ 141
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
I + ++ Y K G + A+ +F + + WN +I Y G + LF M
Sbjct: 142 ICGSAIVKAYSKAGLIVEASKLFCSI--PDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVT 298
HR P+ T+ + L S+H + +++ ++ ALV++YS+ +
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 299 KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
A +F + D V + ++TGY + EA+++F E+ P+ L ++ + +
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
+L D + +H YV+R +++ + +I Y+KCG L+ A +F + +++VS+ S
Sbjct: 320 ELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNS 379
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
+I G HG A F + L D +T +LL G L+ +E+
Sbjct: 380 LILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG 121
VH +K+NL+S +VG +L+ +YS + A VF+ I+ DLVA +S+IT Y+ G
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGN 288
Query: 122 SCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF 181
A + + ++ P+ V + +L + A+L G+ +H Y IR G + D
Sbjct: 289 H--KEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLEL-DIKV 345
Query: 182 ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR 241
+ L+DMY KCG +K A ++F + + S+N LI +G A AFE F +++
Sbjct: 346 CSALIDMYSKCGLLKCAMSLFAGI--PEKNIVSFNSLILGLGLHGFASTAFEKFTEILEM 403
Query: 242 KVLPDLLTLANAILSCAELDYLCHGKSIHGYM-IRMGVEP 280
++PD +T + + +C L G+ I M G+EP
Sbjct: 404 GLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEP 443
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 115/267 (43%), Gaps = 11/267 (4%)
Query: 367 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 426
+ +H +V + + A Q+ YA L AR +F+ R + W S+I Y
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 486
+ LF + R + R D+ T L + S+ ++ +H + + G +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
++++ Y+K G + A LF + + L WN M+ Y G + + + LFN M+ +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI---VPGEVHYNC-IIDLLSRAGQLT 602
P+ T ++ SGL++ L + + + + + + C ++++ SR +
Sbjct: 205 PNCYTMVALT-----SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 603 EAYNLVKSM--PSTHSSAALCTLLSAC 627
A ++ S+ P + ++L T S C
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRC 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
R ++ E L + +L+ S DC + + L SC L GK VH I+L L D
Sbjct: 285 RCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK 344
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
V S+LI +YS+ G L+ A +F I K++V++ S+I G + AF + + +
Sbjct: 345 VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFAST--AFEKFTEILE 402
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
L P+ +T +LL G L +G+ I
Sbjct: 403 MGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 191/335 (57%), Gaps = 2/335 (0%)
Query: 361 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 420
RD R H L+ +I+ V + + ++ Y G ++ A VF M R++VSWT+MI
Sbjct: 134 RDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMI 193
Query: 421 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 480
+G+ +D + L+ +++ + T +LL A + G L + VHC T
Sbjct: 194 SGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN-H 539
L ++NSLI+ Y KCG L A +F Q + + + SWN+M+ YA HG + ++LF
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M KPD +T+ +L++C H+GLV+EG + F +++ E+ + P HY+C++DLL R G
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 600 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 659
L EA L+++MP +S +LL +CR++GD G A++ L LEP ++++V ++N
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLAN 432
Query: 660 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
+ A G W E A +R + KDK LK+ PG S IE++
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 154/292 (52%), Gaps = 8/292 (2%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
+K +S D ++ ++SC G H ++K SD ++GSSL+ LY + G+
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
+E+A++VF+E+ +++V++T++I+ +A + ++ S M+ PN T +LL
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDI--CLKLYSKMRKSTSDPNDYTFTALL 228
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
A G+L +GR++H + G I +L+ MY KCG +K A +F + ++
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHI-SNSLISMYCKCGDLKDAFRIFDQF--SNK 285
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSI 269
V SWN +IA Y +G A++A ELF M+ + PD +T + SC + G+
Sbjct: 286 DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKF 345
Query: 270 HGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVIYNVMM 319
M G++P++ + LVDL +F + +A ++ E + K ++VI+ ++
Sbjct: 346 FNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 7/289 (2%)
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMF 304
D L++A+ SC G H ++ G D+ ++LV LY +V A K+F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 305 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 364
E + ++ V + M++G+ + + ++ +M K + PN F L+SA + +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 365 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV 424
RS+H L + + I+N +I Y KCG L+ A +F++ ++D+VSW SMI GY
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 425 HHGHIDEAIILFRL-LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG--K 481
HG +AI LF L + + + D++T + +L + G + ++ L A HG
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM--AEHGLKP 356
Query: 482 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGN 529
EL+ + L+ + G L A L + M + + W ++L + +HG+
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
L+ Y ++ S + T L +C G L G+ VH ++ + L S + +SLI +
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISM 265
Query: 85 YSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR-LYPNR 143
Y + G L+DA R+FD+ +NKD+V++ S+I YA G A + M + P+
Sbjct: 266 YCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG--LAMQAIELFELMMPKSGTKPDA 323
Query: 144 VTLVSLLHAAAKLGSLQEGR 163
+T + +L + G ++EGR
Sbjct: 324 ITYLGVLSSCRHAGLVKEGR 343
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 218/414 (52%), Gaps = 8/414 (1%)
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 327
+H +++G D LV Y K ++ ARK+F+ + + V + +++GY
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 328 PVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 386
P A+++F +M + V PN F ++ A S L + R+ ++IH + + +++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 387 QIIHTYAKCGYLQYARLVFNRM--RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE-- 442
++ Y KC ++ AR VF+ M R++VSWTSMIT Y + EAI LFR
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 443 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 502
+ R + L S++ A S LG L K H L R + V SL+ YAKCG L+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 503 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 562
+F ++ + S+ +M+ A A HG +KLF+ M G I P+ +T +L ACSHS
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 563 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC- 621
GLV EGL+ M +Y +VP HY C++D+L R G++ EAY L K++ AL
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 622 -TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 674
LLSA RL+G EI +K++++ + +S+Y+ +SN A G W++ +R
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 17/310 (5%)
Query: 58 FGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA 117
F +H ++KL SD F + L+ Y + ++ A ++FDE+ ++V++TS+I+ Y
Sbjct: 47 FTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYN 106
Query: 118 HSGGSCVYGAFRIASTM-QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHG----YAIRR 172
G A + M +D+ + PN T S+ A + L + G+ IH +RR
Sbjct: 107 DMGKP--QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRR 164
Query: 173 GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF 232
+ ++L+DMY KC V+ A VF M V SW +I AY N + EA
Sbjct: 165 NI-----VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 233 ELFRQMIHRKVLPD---LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
ELFR + + D LA+ I +C+ L L GK HG + R G E + V T+L+
Sbjct: 220 ELFRS-FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLL 278
Query: 290 DLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 348
D+Y+K ++ A K+F R+R + Y M+ K+ L A+ +F EM+ ++PN
Sbjct: 279 DMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYV 338
Query: 349 LFLNLISAVS 358
L ++ A S
Sbjct: 339 TLLGVLHACS 348
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 10/254 (3%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT--NK 104
K+C AL GK +H L + V SSL+ +Y + +E A RVFD + +
Sbjct: 138 FKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGR 197
Query: 105 DLVAYTSIITAYAHSG-GSCVYGAFR-IASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
++V++TS+ITAYA + G FR + + R N+ L S++ A + LG LQ G
Sbjct: 198 NVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDR--ANQFMLASVISACSSLGRLQWG 255
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 222
+ HG R G+ + + T+LLDMY KCG + A +F ++ S V S+ +I A
Sbjct: 256 KVAHGLVTRGGYE-SNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS--VISYTSMIMAK 312
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPD 281
+G A +LF +M+ ++ P+ +TL + +C+ + G M + GV PD
Sbjct: 313 AKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPD 372
Query: 282 MVACTALVDLYSKF 295
T +VD+ +F
Sbjct: 373 SRHYTCVVDMLGRF 386
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 148/315 (46%), Gaps = 11/315 (3%)
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 412
L+ +S+ + +H L+ + + N ++ +Y K + AR +F+ M +
Sbjct: 35 LVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 413 LVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVH 471
+VSWTS+I+GY G A+ +F+ + + + + T S+ +A S L K +H
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH 154
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGN 529
+ + + V++SL+ Y KC + AR +F M R + SW +M+ AYA +
Sbjct: 155 ARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNAR 214
Query: 530 YAEVLKLFNHMK--LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 587
E ++LF L + + ++ S+++ACS G ++ G ++ ++ V
Sbjct: 215 GHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVV 273
Query: 588 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL- 646
++D+ ++ G L+ A + + HS + +++ A +G +GEA K ++
Sbjct: 274 ATSLLDMYAKCGSLSCAEKIFLRI-RCHSVISYTSMIMAKAKHG---LGEAAVKLFDEMV 329
Query: 647 EPRNSSSYVLISNIL 661
R + +YV + +L
Sbjct: 330 AGRINPNYVTLLGVL 344
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
+ +C +LGRL++GK H + S+ V +SL+ +Y++ G L A ++F I +
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
++YTS+I A A G A ++ M R+ PN VTL+ +LHA + G + EG
Sbjct: 303 ISYTSMIMAKAKHGLG--EAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS------WNPLIA 220
+ V D T ++DM + G V A + A + VG+ W L++
Sbjct: 361 SLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYEL-----AKTIEVGAEQGALLWGALLS 415
Query: 221 AYLHNGQALEAFELFRQMI--HRKVLPDLLTLANA 253
A +G+ E +++I +++V + L+NA
Sbjct: 416 AGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNA 450
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 213/390 (54%), Gaps = 16/390 (4%)
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMS---VSPNVALFLNLISAVSDLRDIRLARSIHGY 372
N + YL++ P++A+ F + S V LF +S+ + R IH
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHAL 90
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSRDLVSWTSMITGYVHHGHIDE 431
V + + ++I ++ Y+ G + YAR VF+ +++V WT+MI+ Y + + E
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH--GKELSVNNSL 489
AI LF+ ++ E + +D V + L A + LG + +E++ + + +L++ NSL
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 490 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN----- 544
+ Y K G+ AR LF + + +T++ +M+ YA++G E L+LF MK +
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 545 -IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
I P+++TF +L ACSHSGLVEEG + F+SMI +Y + P E H+ C++DL R+G L +
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 604 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAE 663
A+ + MP ++ TLL AC L+G+ E+GE + ++I +L+ + YV +SNI A
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 664 GGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
G WDE + +R + + + PG S IEL
Sbjct: 391 KGMWDEKSKMRDRVRKRRM---PGKSWIEL 417
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 17/308 (5%)
Query: 138 RLYPNRVTLVSLLHA----AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
R P+ V S+L A +A+ S +GR IH + GF +I +T+L+ Y G
Sbjct: 56 RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQI-QTSLVGFYSSVG 114
Query: 194 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
V A VF + V W +I+AY N ++EA ELF++M K+ D + + A
Sbjct: 115 DVDYARQVFDETPEKQNIV-LWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 254 ILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSKFDVT-KARKMFERLRNK 310
+ +CA+L + G+ I+ I+ + D+ +L+++Y K T KARK+F+ K
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS------VSPNVALFLNLISAVSDLRDIR 364
D Y M+ GY N E++ +F +M + ++PN F+ ++ A S +
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 365 LA-RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITG 422
R ++ + R ++ + + G+L+ A N+M + + V W +++
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 423 YVHHGHID 430
HG+++
Sbjct: 354 CSLHGNVE 361
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 183/417 (43%), Gaps = 60/417 (14%)
Query: 22 GEVLRRYLDLK----NSKFSLDCSAITLCLKSCVALGRLEF-GKRVHVDSIKLNLNSDCF 76
GE ++ LD + S +D ++ +K A G+++H KL N+
Sbjct: 42 GEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQ 101
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNK-DLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
+ +SL+ YS G ++ A +VFDE K ++V +T++I+AY + S A + M+
Sbjct: 102 IQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV--EAIELFKRME 159
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC-DEIFETTLLDMYHKCGG 194
+++ + V + L A A LG++Q G I+ +I+R + D +LL+MY K G
Sbjct: 160 AEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE 219
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM--IHRK----VLPDLL 248
+ A +F + + V ++ +I Y NGQA E+ ELF++M I + + P+ +
Sbjct: 220 TEKARKLFDE--SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDV 277
Query: 249 TLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFDVTKARKMFERL 307
T +++C+ + GK MI ++P +VDL+ +
Sbjct: 278 TFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR------------- 324
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLA 366
+G+LK+ HE I +M + PN ++ L+ A S ++ L
Sbjct: 325 ------------SGHLKDA---------HEFINQMPIKPNTVIWRTLLGACSLHGNVELG 363
Query: 367 RSIHGYVLRHQYITRVEIANQII--HTYAKCGYLQYARLVFNRMRSRDLV--SWTSM 419
+ + + R + + + + YA G + +R+R R + SW +
Sbjct: 364 EEVQRRIFE---LDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGKSWIEL 417
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 216/408 (52%), Gaps = 15/408 (3%)
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
D+ + ++F + N N M+ + + P E +F S+ N +L N +S
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFR-----SLRRNSSLPANPLS 115
Query: 356 AVSDLR------DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 409
+ L+ D+ IHG + +++ + ++ Y+ C A VF+ +
Sbjct: 116 SSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP 175
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE---NLRIDSVTLISLLQALSQLGCLSA 466
RD VSW + + Y+ + + ++LF ++ + ++ D VT + LQA + LG L
Sbjct: 176 KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF 235
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 526
K+VH L+++N+L++ Y++CG ++ A +F M ER + SW A++ AM
Sbjct: 236 GKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM 295
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR-EYTIVPGE 585
+G E ++ FN M I P+E T T +L+ACSHSGLV EG+ F M E+ I P
Sbjct: 296 NGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNL 355
Query: 586 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 645
HY C++DLL RA L +AY+L+KSM S TLL ACR++GD E+GE + +++
Sbjct: 356 HHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
Query: 646 LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 693
L+ + YVL+ N + G+W++V +R++ K+K + + PG S IEL
Sbjct: 416 LKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIEL 463
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 184/391 (47%), Gaps = 22/391 (5%)
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELDYLCHGK 267
+ T+ N +I A+ + E F LFR + LP + L+ + A+ C + L G
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND 326
IHG + G D + T L+DLYS + T A K+F+ + +D V +NV+ + YL+N
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 327 LPVEAINVFHEM---IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
+ + +F +M + V P+ L + A ++L + + +H ++ + +
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
++N ++ Y++CG + A VF MR R++VSWT++I+G +G EAI F + +
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL------ITTYAKCG 497
+ + TL LL A S G ++ + + E + +L + +
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAE----GMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 498 KLNMARYLFQQMTERC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL-TFTSI 555
L+ A L + M + T W +LGA +HG+ ++ +H L +K +E + +
Sbjct: 370 LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISH--LIELKAEEAGDYVLL 427
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTI--VPG 584
L S G E+ ++ RS+++E I PG
Sbjct: 428 LNTYSTVGKWEKVTEL-RSLMKEKRIHTKPG 457
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 153/346 (44%), Gaps = 12/346 (3%)
Query: 32 KNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKL 91
+NS + + + LK C+ G L G ++H SD + ++L+ LYS
Sbjct: 105 RNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENS 164
Query: 92 EDAHRVFDEITNKDLVAYTSIITAYAHSGGS-CVYGAFRIASTMQDQRLYPNRVTLVSLL 150
DA +VFDEI +D V++ + + Y + + V F D + P+ VT + L
Sbjct: 165 TDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLAL 224
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
A A LG+L G+ +H + G + TL+ MY +CG + A VF M +
Sbjct: 225 QACANLGALDFGKQVHDFIDENGLSGALNL-SNTLVSMYSRCGSMDKAYQVFYGMRERN- 282
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
V SW LI+ NG EA E F +M+ + P+ TL + +C+ + G
Sbjct: 283 -VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFF 341
Query: 271 GYMIRMG---VEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVIYNVMMTG-YLK 324
M R G ++P++ +VDL + + KA + + + K D+ I+ ++ +
Sbjct: 342 DRM-RSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVH 400
Query: 325 NDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSI 369
D+ + + H + +K + + L LN S V + RS+
Sbjct: 401 GDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSL 446
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 4 KHPSITGNLVASC--RRRHYGEVLRRYLDLKNSK---FSLDCSAITLCLKSCVALGRLEF 58
K +++ N++ SC R + +VL + +KN D L L++C LG L+F
Sbjct: 176 KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF 235
Query: 59 GKRVHVDSIKLN-LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA 117
GK+VH D I N L+ + ++L+ +YS G ++ A++VF + +++V++T++I+ A
Sbjct: 236 GKQVH-DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA 294
Query: 118 HSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG 162
+G G AF + M + P TL LL A + G + EG
Sbjct: 295 MNGFGKEAIEAF---NEMLKFGISPEEQTLTGLLSACSHSGLVAEG 337
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 207/395 (52%), Gaps = 36/395 (9%)
Query: 330 EAINVFHEMIKMSVSP-NVALF-LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 387
+A+N+F +M P + +F L L S + R + L S+H + ++ +++ +
Sbjct: 30 QALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV-LGGSVHAHSVKSNFLSNPFVGCA 88
Query: 388 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF----------- 436
++ Y KC + +AR +F+ + R+ V W +MI+ Y H G + EA+ L+
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 437 ----------------------RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 474
R + + + +TL++L+ A S +G +KE+H
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 475 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 534
+R + + L+ Y +CG + + +F M +R + +W++++ AYA+HG+ L
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
K F M+L + PD++ F ++L ACSH+GL +E L F+ M +Y + + HY+C++D+
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 595 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 654
LSR G+ EAY ++++MP ++ LL ACR YG+ E+ E A+++L +EP N ++Y
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANY 388
Query: 655 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 689
VL+ I GR +E +R K+ +K +PG S
Sbjct: 389 VLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 172/365 (47%), Gaps = 42/365 (11%)
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELDYLCH 265
++ T + S +++Y + G +A LF QM LP D + A+ SCA
Sbjct: 7 SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLK 324
G S+H + ++ + AL+D+Y K V+ ARK+F+ + ++AV++N M++ Y
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 325 --------------NDLPVE-------------------AINVFHEMIKMSVSPNVALFL 351
+ +P E AI + +MI+ PN+ L
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
L+SA S + RL + IH Y R+ ++ + ++ Y +CG + Y +LVF+ M R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
D+V+W+S+I+ Y HG + A+ F+ ++ + D + +++L+A S G L+ V+
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG-LADEALVY 305
Query: 472 CLTYRAFHGKELSVN--NSLITTYAKCGKLNMARYLFQQMTER-CLTSWNAMLGAYAMHG 528
+ +G S + + L+ ++ G+ A + Q M E+ +W A+LGA
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR--- 362
Query: 529 NYAEV 533
NY E+
Sbjct: 363 NYGEI 367
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 48/327 (14%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNS-KFSLDCSAITLCLKSCVALGRLEFGKRVHVD 65
S+T L + + ++ + L +L + +S LD +L LKSC A R G VH
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 66 SIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG----- 120
S+K N S+ FVG +L+ +Y + + A ++FDEI ++ V + ++I+ Y H G
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 121 ----------------------------GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
GS Y A M + R PN +TL++L+ A
Sbjct: 134 VELYEAMDVMPNESSFNAIIKGLVGTEDGS--YRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 212
+ +G+ + + IH YA R ++ ++ L++ Y +CG + VF M V
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQL-KSGLVEAYGRCGSIVYVQLVFDSME--DRDV 248
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL----DYLCHGKS 268
+W+ LI+AY +G A A + F++M KV PD + N + +C+ + L + K
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 269 IHG-YMIRMGVEPDMVACTALVDLYSK 294
+ G Y +R D +C LVD+ S+
Sbjct: 309 MQGDYGLR--ASKDHYSC--LVDVLSR 331
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 56/328 (17%)
Query: 162 GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 221
G ++H ++++ F + + LLDMY KC V A +F ++ + V WN +I+
Sbjct: 67 GGSVHAHSVKSNF-LSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVV--WNAMISH 123
Query: 222 YLHNGQALEAFELF---------------------------------RQMIHRKVLPDLL 248
Y H G+ EA EL+ R+MI + P+L+
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL 307
TL + +C+ + K IH Y R +EP + LV+ Y + + + +F+ +
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS-----DLRD 362
++D V ++ +++ Y + A+ F EM V+P+ FLN++ A S D
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 363 IRLARSIHGYVLR---HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV-SWTS 418
+ R Y LR Y V++ +++ G + A V M + +W +
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRV-------GRFEEAYKVIQAMPEKPTAKTWGA 356
Query: 419 MITGYVHHGHIDEAIILFR---LLQREN 443
++ ++G I+ A I R +++ EN
Sbjct: 357 LLGACRNYGEIELAEIAARELLMVEPEN 384
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 35 KFSLDCSAITLC--LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLE 92
+F + ITL + +C A+G K +H + + + + S L+ Y G +
Sbjct: 175 EFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIV 234
Query: 93 DAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
VFD + ++D+VA++S+I+AYA G + A + M+ ++ P+ + +++L A
Sbjct: 235 YVQLVFDSMEDRDVVAWSSLISAYALHGDA--ESALKTFQEMELAKVTPDDIAFLNVLKA 292
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGV-CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
+ G L + ++ ++ +G+ + + L+D+ + G + A V M T
Sbjct: 293 CSHAG-LADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAM-PEKPT 350
Query: 212 VGSWNPLIAAYLHNGQ 227
+W L+ A + G+
Sbjct: 351 AKTWGALLGACRNYGE 366
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 213/384 (55%), Gaps = 3/384 (0%)
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYV 373
+N ++ G+ + P+ +I ++ M+ SVS P++ F + + ++ I IHG V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
+R ++ +A ++ Y+ G ++ A VF+ M RDLVSW MI + H G ++A+
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 493
+++ + E + DS TL++LL + + + L+ +H + + V+N+LI Y
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 494 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
AKCG L A +F M +R + +WN+M+ Y +HG+ E + F M ++P+ +TF
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFL 313
Query: 554 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 613
+L CSH GLV+EG++ F M ++ + P HY C++DL RAGQL + ++ + S
Sbjct: 314 GLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA-SS 372
Query: 614 THSSAALC-TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 672
H L TLL +C+++ + E+GE K++++LE N+ YVL+++I + A
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 673 IRAMTKDKELKSTPGYSLIELDKQ 696
+R + + +L++ PG+S IE+ Q
Sbjct: 433 MRKLIRSHDLQTVPGWSWIEIGDQ 456
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 28/268 (10%)
Query: 39 DCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF 98
D LKSC + + +H I+ D V +SL+R YS G +E A +VF
Sbjct: 106 DLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVF 165
Query: 99 DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS 158
DE+ +DLV++ +I ++H G A + M ++ + + TLV+LL + A + +
Sbjct: 166 DEMPVRDLVSWNVMICCFSHVGLH--NQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 159 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 218
L G +H A C L+DMY KCG ++ A VF M V +WN +
Sbjct: 224 LNMGVMLHRIACDIRCESC-VFVSNALIDMYAKCGSLENAIGVFNGMRKRD--VLTWNSM 280
Query: 219 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 278
I Y +G +EA FR+M+ V P+ +T +L C+ H +++ GV
Sbjct: 281 IIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS-----------HQGLVKEGV 329
Query: 279 E------------PDMVACTALVDLYSK 294
E P++ +VDLY +
Sbjct: 330 EHFEIMSSQFHLTPNVKHYGCMVDLYGR 357
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 197/437 (45%), Gaps = 25/437 (5%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL--YSEYGKLEDAHRVFDEI-TN 103
L+ C ++ +L +++H I L + + L+R S G L A +FD ++
Sbjct: 12 LQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSD 68
Query: 104 KDLVAYTSIITAYAHSGGSC----VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSL 159
+ +I +++S Y ++S + P+ T L + ++ S+
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSR-----PDLFTFNFALKSCERIKSI 123
Query: 160 QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI 219
+ IHG IR GF + D I T+L+ Y G V++A+ VF +M SWN +I
Sbjct: 124 PKCLEIHGSVIRSGF-LDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLV--SWNVMI 180
Query: 220 AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE 279
+ H G +A ++++M + V D TL + SCA + L G +H + E
Sbjct: 181 CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCE 240
Query: 280 PDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 338
+ AL+D+Y+K + A +F +R +D + +N M+ GY + VEAI+ F +M
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 339 IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY--ITRVEIANQIIHTYAKCG 396
+ V PN FL L+ S ++ H ++ Q+ V+ ++ Y + G
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
Query: 397 YLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHID-EAIILFRLLQRENLRI-DSVTLIS 453
L+ + +++ D V W +++ H +++ + + +L+Q E D V + S
Sbjct: 360 QLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTS 419
Query: 454 LLQALSQLGCLSAVKEV 470
+ A + ++++++
Sbjct: 420 IYSAANDAQAFASMRKL 436
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 207/414 (50%), Gaps = 34/414 (8%)
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
N + YL + P +A+ + ++++ P+ F++LIS + + + HG ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI------ 429
H + + N ++H Y CG L A+ +F + RD+VSW S+I G V +G +
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 430 -DE------------------------AIILFRLLQRENLRIDSVTLISLLQALSQLGCL 464
DE +I LFR + R + + TL+ LL A + L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 465 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAY 524
+ VH R F + ++ +LI Y KC ++ +AR +F ++ R +WN M+ A+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 525 AMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPG 584
+HG L+LF M G ++PDE+TF +L C+ +GLV +G + M+ E+ I P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 585 EVHYNCIIDLLSRAGQLTEAYNLVKSMPS---THSSAALCTLLSACRLYGDTEIGEAIAK 641
H C+ +L S AG EA +K++P T S LLS+ R G+ +GE+IAK
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 642 QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDK 695
+++ +P N Y L+ NI + GRW++V +R M K++++ PG L++L +
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKE 500
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 37/351 (10%)
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI-----LSCAELDYLCHGKSI- 269
NP+ AYL + +A + ++ +PD T + I C + +CHG++I
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 270 HGYMIRMGVEPD---MVACTALVDLYSKF-----------------------DVTKARKM 303
HG + V+ M C +DL K DV A K+
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
F+ + +K+ + +N+M++ YL + P +I++F EM++ N + + L++A +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 423
+ RS+H ++R + V I +I Y KC + AR +F+ + R+ V+W MI +
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE- 482
HG + + LF + LR D VT + +L ++ G +S + + L F K
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS----WNAMLGAYAMHGN 529
+ Y+ G A + + + +T W +L + GN
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 11/260 (4%)
Query: 54 GRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSII 113
G L+ K++ V+ K ++ S + + ++R G + AH++FDE+ +K+++++ +I
Sbjct: 167 GALDLAKKLFVEIPKRDIVSWNSIIAGMVR----NGDVLAAHKLFDEMPDKNIISWNIMI 222
Query: 114 TAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG 173
+AY + V + + M N TLV LL+A + L+EGR++H IR
Sbjct: 223 SAYLGANNPGV--SISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRT- 279
Query: 174 FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
F + +T L+DMY KC V +A +F ++ + +WN +I A+ +G+ E
Sbjct: 280 FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV--TWNVMILAHCLHGRPEGGLE 337
Query: 234 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLY 292
LF MI+ + PD +T + CA + G+S + M+ ++P+ + +LY
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 293 SKFDVT-KARKMFERLRNKD 311
S +A + + L ++D
Sbjct: 398 SSAGFPEEAEEALKNLPDED 417
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 42/319 (13%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF--ETTLLDMYHKCGGVKMA 198
P+ T VSL+ K + G+ HG AI+ G CD++ + +L+ MY CG + +A
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG---CDQVLPVQNSLMHMYTCCGALDLA 172
Query: 199 AAVFGKM------NATSTTVG-----------------------SWNPLIAAYLHNGQAL 229
+F ++ + S G SWN +I+AYL
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 230 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
+ LFR+M+ + TL + +C L G+S+H +IR + +V TAL+
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALI 292
Query: 290 DLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 348
D+Y K +V AR++F+ L ++ V +NVM+ + + P + +F MI + P+
Sbjct: 293 DMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEV 352
Query: 349 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFN 406
F+ ++ + + +S + ++ ++ + +Q + + Y+ G+ + A
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMV-DEFQIKPNFGHQWCMANLYSSAGFPEEAEEALK 411
Query: 407 RMRSRDLVS----WTSMIT 421
+ D+ W ++++
Sbjct: 412 NLPDEDVTPESTKWANLLS 430
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
+ ++ + F + S + L L +C RL+ G+ VH I+ LNS + ++LI +Y +
Sbjct: 238 FREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGK 297
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
++ A R+FD ++ ++ V + +I A+ G G + M + L P+ VT V
Sbjct: 298 CKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRP--EGGLELFEAMINGMLRPDEVTFV 355
Query: 148 SLLHAAAKLGSLQEGRA-----IHGYAIRRGFG 175
+L A+ G + +G++ + + I+ FG
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFG 388
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 256/509 (50%), Gaps = 8/509 (1%)
Query: 60 KRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS 119
KR+H ++K + + G++LI G L A +VFD + K+ V +T++I Y
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 120 GGSCVYGAFRIASTMQDQRL-YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD 178
G AF + + + N V LL+ ++ + GR +HG ++ G G +
Sbjct: 162 G--LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG--N 217
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
I E++L+ Y +CG + A F M V SW +I+A G ++A +F M
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMME--EKDVISWTAVISACSRKGHGIKAIGMFIGM 275
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DV 297
++ LP+ T+ + + +C+E L G+ +H +++ ++ D+ T+L+D+Y+K ++
Sbjct: 276 LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEI 335
Query: 298 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
+ RK+F+ + N++ V + ++ + + EAI++F M + + N ++++ A
Sbjct: 336 SDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
+ + L + +H ++++ V I + ++ Y KCG + A V ++ SRD+VSWT
Sbjct: 396 GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWT 455
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 477
+MI+G GH EA+ + + +E + + T S L+A + L + +H + +
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 537
+ V ++LI YAKCG ++ A +F M E+ L SW AM+ YA +G E LKL
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLM 575
Query: 538 NHMKLGNIKPDELTFTSILTACSHSGLVE 566
M+ + D+ F +IL+ C L E
Sbjct: 576 YRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 221/424 (52%), Gaps = 9/424 (2%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L C E G++VH + +K+ + + V SSL+ Y++ G+L A R FD + KD+
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 107 VAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
+++T++I+A + G G G F M + PN T+ S+L A ++ +L+ GR +
Sbjct: 250 ISWTAVISACSRKGHGIKAIGMF---IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 306
Query: 166 HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHN 225
H ++R D T+L+DMY KCG + VF M+ +T +W +IAA+
Sbjct: 307 HSLVVKRMIKT-DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV--TWTSIIAAHARE 363
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
G EA LFR M R ++ + LT+ + + +C + L GK +H +I+ +E ++
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 286 TALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 344
+ LV LY K ++ A + ++L ++D V + M++G EA++ EMI+ V
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 345 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 404
PN + + + A ++ + + RSIH ++ ++ V + + +IH YAKCG++ A V
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRV 543
Query: 405 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL 464
F+ M ++LVSW +MI GY +G EA+ L ++ E +D ++L +
Sbjct: 544 FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELD 603
Query: 465 SAVK 468
AV+
Sbjct: 604 EAVE 607
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 225/443 (50%), Gaps = 18/443 (4%)
Query: 181 FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
F L+ + G + A VF M +T +W +I YL G EAF LF +
Sbjct: 119 FGNNLISSCVRLGDLVYARKVFDSMPEKNTV--TWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 241 RKVLPD----LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF- 295
+ + L N AE + G+ +HG M+++GV +++ ++LV Y++
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFEL---GRQVHGNMVKVGV-GNLIVESSLVYFYAQCG 232
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
++T A + F+ + KD + + +++ + ++AI +F M+ PN +++
Sbjct: 233 ELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILK 292
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
A S+ + +R R +H V++ T V + ++ YAKCG + R VF+ M +R+ V+
Sbjct: 293 ACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT 352
Query: 416 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 475
WTS+I + G +EAI LFR+++R +L +++T++S+L+A +G L KE+H
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 535
+ K + + ++L+ Y KCG+ A + QQ+ R + SW AM+ + G+ +E L
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR---SMIREYTIVPGEVHYNCII 592
M ++P+ T++S L AC++S E L I R S+ ++ + + +I
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANS----ESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 593 DLLSRAGQLTEAYNLVKSMPSTH 615
+ ++ G ++EA+ + SMP +
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKN 551
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 187/352 (53%), Gaps = 9/352 (2%)
Query: 12 LVASCRRRHYG-EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN 70
++++C R+ +G + + ++ + N F + + LK+C L FG++VH +K
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 71 LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG-GSCVYGAFR 129
+ +D FVG+SL+ +Y++ G++ D +VFD ++N++ V +TSII A+A G G FR
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 130 IASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMY 189
I M+ + L N +T+VS+L A +G+L G+ +H I+ + +TL+ +Y
Sbjct: 375 I---MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK-NVYIGSTLVWLY 430
Query: 190 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
KCG + A V ++ S V SW +I+ G EA + ++MI V P+ T
Sbjct: 431 CKCGESRDAFNVLQQL--PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR 308
++A+ +CA + L G+SIH + ++ +AL+ +Y+K V++A ++F+ +
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL 360
K+ V + M+ GY +N EA+ + + M + +F ++S D+
Sbjct: 549 EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 184/359 (51%), Gaps = 12/359 (3%)
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLI 354
D+ ARK+F+ + K+ V + M+ GYLK L EA +F + +K + N +F+ L+
Sbjct: 132 DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLL 191
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV 414
+ S + L R +HG +++ + + + + +++ YA+CG L A F+ M +D++
Sbjct: 192 NLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVI 250
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 474
SWT++I+ GH +AI +F + + T+ S+L+A S+ L ++VH L
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLV 310
Query: 475 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 534
+ ++ V SL+ YAKCG+++ R +F M+ R +W +++ A+A G E +
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR---EYTIVPGEVHYNCI 591
LF MK ++ + LT SIL AC G + G ++ +I+ E + G +
Sbjct: 371 SLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST----L 426
Query: 592 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK--LEP 648
+ L + G+ +A+N+++ +PS + ++S C G K++++ +EP
Sbjct: 427 VWLYCKCGESRDAFNVLQQLPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 504
R+D L LQ+ + + +K +H + + F + + N+LI++ + G L AR
Sbjct: 82 RVDYALLAEWLQSSNGM---RLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARK 138
Query: 505 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF-NHMKLGNIKPDELTFTSILTACSHSG 563
+F M E+ +W AM+ Y +G E LF +++K G +E F +L CS
Sbjct: 139 VFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRA 198
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
E G Q+ +M++ V + + ++ ++ G+LT A M + +
Sbjct: 199 EFELGRQVHGNMVK--VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEE-KDVISWTAV 255
Query: 624 LSACRLYG 631
+SAC G
Sbjct: 256 ISACSRKG 263
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 193/352 (54%), Gaps = 14/352 (3%)
Query: 350 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 409
LN+ S+ DLR + G + N +++ YAK G + AR +F+ M
Sbjct: 103 LLNMYSSCGDLRSAQRVFDDSGS-------KDLPAWNSVVNAYAKAGLIDDARKLFDEMP 155
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQ--REN---LRIDSVTLISLLQALSQLGCL 464
R+++SW+ +I GYV G EA+ LFR +Q + N +R + T+ ++L A +LG L
Sbjct: 156 ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGAL 215
Query: 465 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGA 523
K VH + ++ + +LI YAKCG L A+ +F + +++ + +++AM+
Sbjct: 216 EQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICC 275
Query: 524 YAMHGNYAEVLKLFNHMKLG-NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
AM+G E +LF+ M NI P+ +TF IL AC H GL+ EG F+ MI E+ I
Sbjct: 276 LAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGIT 335
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 642
P HY C++DL R+G + EA + + SMP +LLS R+ GD + E K+
Sbjct: 336 PSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKR 395
Query: 643 ILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
+++L+P NS +YVL+SN+ A+ GRW EV IR + K + PG S +E++
Sbjct: 396 LIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVE 447
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 44/334 (13%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
YL ++N + S D L S L G+R H + L+ D FV +SL+ +YS
Sbjct: 50 YLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSS 109
Query: 88 YGKL-------------------------------EDAHRVFDEITNKDLVAYTSIITAY 116
G L +DA ++FDE+ +++++++ +I Y
Sbjct: 110 CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGY 169
Query: 117 AHSGGSCVYGAFRIASTMQ-----DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR 171
G A + MQ + + PN T+ ++L A +LG+L++G+ +H Y +
Sbjct: 170 VMCGK--YKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK 227
Query: 172 RGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEA 231
+ D + T L+DMY KCG ++ A VF + + V +++ +I G E
Sbjct: 228 YHVEI-DIVLGTALIDMYAKCGSLERAKRVFNAL-GSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 232 FELFRQM-IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALV 289
F+LF +M + P+ +T + +C + GKS MI G+ P + +V
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMV 345
Query: 290 DLYSKFDVTKARKMF--ERLRNKDAVIYNVMMTG 321
DLY + + K + F D +I+ +++G
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
D SLL S G L + + V + K+L NS++ YAK G ++ AR LF
Sbjct: 96 DPFVRTSLLNMYSSCGDLRSAQRV----FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLF 151
Query: 507 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-----IKPDELTFTSILTACSH 561
+M ER + SW+ ++ Y M G Y E L LF M+L ++P+E T +++L+AC
Sbjct: 152 DEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 562 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC 621
G +E+G + + I +Y + V +ID+ ++ G L A + ++ S A
Sbjct: 212 LGALEQGKWV-HAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 622 TLLSACRLYGDTE 634
++ +YG T+
Sbjct: 271 AMICCLAMYGLTD 283
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 158/360 (43%), Gaps = 46/360 (12%)
Query: 215 WNPLIAAYLHN---GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 271
WN +I A +HN Q ++ +M + +V PD T + S +L G+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 272 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK------ 324
++ G++ D T+L+++YS D+ A+++F+ +KD +N ++ Y K
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 325 -----NDLP--------------------VEAINVFHEMI-----KMSVSPNVALFLNLI 354
+++P EA+++F EM + V PN ++
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS-RDL 413
SA L + + +H Y+ ++ + + +I YAKCG L+ A+ VFN + S +D+
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 414 VSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC 472
++++MI +G DE LF + +N+ +SVT + +L A G ++ K
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 473 LTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 529
+ F G S+ + ++ Y + G + A M E + W ++L M G+
Sbjct: 327 MMIEEF-GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 40/328 (12%)
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 193
M++ R+ P+ T LL + L G+ H + G D T+LL+MY CG
Sbjct: 53 MRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDK-DPFVRTSLLNMYSSCG 111
Query: 194 GVKMAAAVFGK------------MNA-----------------TSTTVGSWNPLIAAYLH 224
++ A VF +NA V SW+ LI Y+
Sbjct: 112 DLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM 171
Query: 225 NGQALEAFELFRQMIHRK-----VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE 279
G+ EA +LFR+M K V P+ T++ + +C L L GK +H Y+ + VE
Sbjct: 172 CGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVE 231
Query: 280 PDMVACTALVDLYSKF-DVTKARKMFERL-RNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
D+V TAL+D+Y+K + +A+++F L KD Y+ M+ L E +F E
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSE 291
Query: 338 MIKM-SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQIIHTYAKC 395
M +++PN F+ ++ A I +S ++ IT ++ ++ Y +
Sbjct: 292 MTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 396 GYLQYARLVFNRMR-SRDLVSWTSMITG 422
G ++ A M D++ W S+++G
Sbjct: 352 GLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 259/566 (45%), Gaps = 51/566 (9%)
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
D++ P+ +SL+HA SL R +H +RRG V L+
Sbjct: 22 DRQASPDESHFISLIHACKDTASL---RHVHAQILRRG--VLSSRVAAQLVSCSSLLKSP 76
Query: 196 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
+ ++F N+ N LI N + + F M+ V PD LT +
Sbjct: 77 DYSLSIF--RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLK 134
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFE----RLRNK 310
S ++L + G+++H ++ V+ D +LVD+Y+K K A ++FE R++ +
Sbjct: 135 SNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKE 194
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
+I+NV++ GY + A +F M + + L I
Sbjct: 195 SILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTL-------------------IK 235
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 430
GYV G L A+ +F M +++VSWT++I G+ G +
Sbjct: 236 GYV--------------------DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYE 275
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 490
AI + + + L+ + T+ ++L A S+ G L + +H + ++ +L+
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALV 335
Query: 491 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 550
YAKCG+L+ A +F M + + SW AM+ +A+HG + + ++ F M KPDE+
Sbjct: 336 DMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEV 395
Query: 551 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 610
F ++LTAC +S V+ GL F SM +Y I P HY ++DLL RAG+L EA+ LV++
Sbjct: 396 VFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVEN 455
Query: 611 MPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 670
MP L AC+ + E++++ +L+L+P SY+ + A G +V
Sbjct: 456 MPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDV 515
Query: 671 AHIRAMTKDKELKSTPGYSLIELDKQ 696
R + + + + G+S IELD Q
Sbjct: 516 EKRRLSLQKRIKERSLGWSYIELDGQ 541
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 12/220 (5%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
S+LI+ Y + G+L A ++F+ + K++V++T++I ++ +G A M ++
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD--YETAISTYFEMLEKG 288
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
L PN T+ ++L A +K G+L G IHGY + G + D T L+DMY KCG + A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKL-DRAIGTALVDMYAKCGELDCA 347
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD---LLTLANAIL 255
A VF MN + SW +I + +G+ +A + FRQM++ PD L + A L
Sbjct: 348 ATVFSNMN--HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACL 405
Query: 256 SCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSK 294
+ +E+D G + M + +EP + +VDL +
Sbjct: 406 NSSEVDL---GLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 21 YGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSS 80
Y + Y ++ + I L +C G L G R+H + + D +G++
Sbjct: 274 YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTA 333
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
L+ +Y++ G+L+ A VF + +KD++++T++I +A V+G F A Q +Y
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWA------VHGRFHQAIQCFRQMMY 387
Query: 141 ----PNRVTLVSLLHA 152
P+ V +++L A
Sbjct: 388 SGEKPDEVVFLAVLTA 403
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 274/588 (46%), Gaps = 42/588 (7%)
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
LY +R+ SLL + L + +H + GF V + L +Y K G V A
Sbjct: 5 LYFSRLVNRSLLSKSPTLA-----KIVHAQLLEAGF-VRTTYWGNRCLQLYFKSGSVINA 58
Query: 199 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F + +T +WN + NG A +LF +M R V+ T+ + ++SC
Sbjct: 59 LQLFDDIPDKNTI--TWNVCLKGLFKNGYLNNALDLFDEMPERDVVS-WNTMISGLVSCG 115
Query: 259 ELDY-----------------------------LCHGKSIHGYMIRMGVEP-DMVACTAL 288
+Y + HG+ IHG I GV ++V ++
Sbjct: 116 FHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 289 VDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
+D+Y + V A +F + ++D V +N ++ + A++ F M +M + P+
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE 235
Query: 348 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 407
++S SDLR++ + ++ +++ + I ++KC L + +F
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 408 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
+ D V SMI Y H ++A+ LF L +++R D T S+L +++ + L
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHG 354
Query: 468 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 527
+VH L + + +V SL+ Y K G +++A +F + + L WN ++ A +
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARN 414
Query: 528 GNYAEVLKLFNHMKLG-NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 586
E L +FN + + ++KPD +T IL AC ++G V EG+QIF SM + + + PG
Sbjct: 415 SRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNE 474
Query: 587 HYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL 646
HY CII+LL R G + EA ++ +P SS +L A GDT + E +AK +L+
Sbjct: 475 HYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLES 534
Query: 647 EPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 694
EP++S Y+++ I RW+ +R + +LKS G S I ++
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIE 582
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 187/374 (50%), Gaps = 16/374 (4%)
Query: 89 GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVS 148
G L +A +FDE+ +D+V++ ++I+ S G YG R+ MQ + P T
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLV-SCGFHEYG-IRVFFDMQRWEIRPTEFTFSI 141
Query: 149 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 208
L A+ + ++ G IHG AI G + + +++DMY + G A +VF M
Sbjct: 142 L---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME-- 196
Query: 209 STTVGSWNPLIAAYLHNGQ---ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 265
V SWN LI + +G AL+ F L R+M ++ PD T++ + C++L L
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREM---EIQPDEYTVSMVVSICSDLRELSK 253
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLK 324
GK I+MG + + A +D++SK + + + K+F L D+V+ N M+ Y
Sbjct: 254 GKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSW 313
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
+ +A+ +F + SV P+ F +++S+++ + + +H V++ + +
Sbjct: 314 HCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAV 372
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQREN 443
A ++ Y K G + A VF + +DL+ W ++I G + E++ +F +LL ++
Sbjct: 373 ATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQS 432
Query: 444 LRIDSVTLISLLQA 457
L+ D VTL+ +L A
Sbjct: 433 LKPDRVTLMGILVA 446
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 9/272 (3%)
Query: 12 LVASCRRRHYGEV-LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN 70
L+ SC EV L ++ ++ + D +++ + C L L GK+ IK+
Sbjct: 206 LILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMG 265
Query: 71 LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRI 130
S+ V + I ++S+ +L+D+ ++F E+ D V S+I +Y S C A R+
Sbjct: 266 FLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY--SWHCCGEDALRL 323
Query: 131 ASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYH 190
Q + P++ T S+L + + L G +H I+ GF + D T+L++MY
Sbjct: 324 FILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDL-DTAVATSLMEMYF 381
Query: 191 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLT 249
K G V +A VF K + WN +I N +A+E+ +F Q++ + L PD +T
Sbjct: 382 KTGSVDLAMGVFAKTDGKDLIF--WNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVT 439
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRM-GVEP 280
L +++C ++ G I M + GV P
Sbjct: 440 LMGILVACCYAGFVNEGIQIFSSMEKAHGVNP 471
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Query: 56 LEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITA 115
L+ G VH IKL + D V +SL+ +Y + G ++ A VF + KDL+ + ++I
Sbjct: 351 LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 116 YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG 175
A + + V + +Q L P+RVTL+ +L A G + EG I ++ + G
Sbjct: 411 LARNSRA-VESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFS-SMEKAHG 468
Query: 176 V--CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
V +E + ++++ + G + A + K+ ++ W P++ A L G A
Sbjct: 469 VNPGNEHY-ACIIELLCRVGMINEAKDIADKIPFEPSS-HIWEPILCASLDLGDTRLAET 526
Query: 234 LFRQMIHRK 242
+ + M+ +
Sbjct: 527 VAKTMLESE 535
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 205/403 (50%), Gaps = 12/403 (2%)
Query: 294 KFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
+F V RK E+L D + + +TG LK EA+ + + V P + L
Sbjct: 67 RFQVENQRKT-EKL---DKTLKGLCVTGRLK-----EAVGLLWSS-GLQVEPET--YAVL 114
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+ ++ + IH + + + +++ YA G LQ A ++F ++ RDL
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDL 174
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
+ W +MI+GYV G E + ++ +++ + D T S+ +A S L L K H +
Sbjct: 175 IPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAV 234
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 533
+ + V+++L+ Y KC + +F Q++ R + +W +++ Y HG +EV
Sbjct: 235 MIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEV 294
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
LK F MK +P+ +TF +LTAC+H GLV++G + F SM R+Y I P HY ++D
Sbjct: 295 LKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVD 354
Query: 594 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 653
L RAG+L EAY V P +LL ACR++G+ ++ E A + L+L+P N +
Sbjct: 355 TLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGN 414
Query: 654 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 696
YV+ +N A G + + +R ++ +K PGYS IEL +
Sbjct: 415 YVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGE 457
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 9/314 (2%)
Query: 121 GSCVYGAFRIA-STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
G CV G + A + L T LL + +G+ IH GF + +E
Sbjct: 85 GLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFAL-NE 143
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
+ LL +Y G ++ A +F + WN +I+ Y+ G E ++ M
Sbjct: 144 YLKVKLLILYALSGDLQTAGILFRSLKIRDLI--PWNAMISGYVQKGLEQEGLFIYYDMR 201
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVT 298
+++PD T A+ +C+ LD L HGK H MI+ ++ +++ +ALVD+Y K +
Sbjct: 202 QNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFS 261
Query: 299 KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
++F++L ++ + + +++GY + E + F +M + PN FL +++A +
Sbjct: 262 DGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN 321
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIAN--QIIHTYAKCGYLQYA-RLVFNRMRSRDLVS 415
+ H Y ++ Y E + ++ T + G LQ A V
Sbjct: 322 HGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV 380
Query: 416 WTSMITGYVHHGHI 429
W S++ HG++
Sbjct: 381 WGSLLGACRIHGNV 394
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 8/262 (3%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
L +S ++ + L+ C GKR+H + + ++ L+ LY+ G
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGD 158
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLL 150
L+ A +F + +DL+ + ++I+ Y G G F I M+ R+ P++ T S+
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLE-QEGLF-IYYDMRQNRIVPDQYTFASVF 216
Query: 151 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 210
A + L L+ G+ H I+R + I ++ L+DMY KC VF ++ ++
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIK-SNIIVDSALVDMYFKCSSFSDGHRVFDQL--STR 273
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 270
V +W LI+ Y ++G+ E + F +M P+ +T + +C + G H
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-H 332
Query: 271 GYMIR--MGVEPDMVACTALVD 290
Y ++ G+EP+ A+VD
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVD 354
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
Y D++ ++ D ++C AL RLE GKR H IK + S+ V S+L+ +Y +
Sbjct: 197 YYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFK 256
Query: 88 YGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLV 147
D HRVFD+++ ++++ +TS+I+ Y + G V + M+++ PN VT +
Sbjct: 257 CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK--VSEVLKCFEKMKEEGCRPNPVTFL 314
Query: 148 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
+L A G + +G H Y+++R +G+ E
Sbjct: 315 VVLTACNHGGLVDKGWE-HFYSMKRDYGIEPE 345
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 153/591 (25%), Positives = 267/591 (45%), Gaps = 51/591 (8%)
Query: 108 AYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHG 167
++++I+ A A G G R A + + P+ LV LL + G + R +HG
Sbjct: 23 SWSTIVPALARFGS---IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 168 YAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 227
Y + GF V + +L+ Y ++ A VF +M V SWN L++ Y+ +G+
Sbjct: 80 YVTKHGF-VSNTRLSNSLMRFYKTSDSLEDAHKVFDEM--PDPDVISWNSLVSGYVQSGR 136
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEP-DMVACT 286
E LF ++ V P+ + A+ +CA L G IH ++++G+E ++V
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 287 ALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 345
L+D+Y K + A +F+ + KD V +N ++ +N + FH+M +P
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNP 252
Query: 346 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 405
+ + N++I + K G A V
Sbjct: 253 DTVTY-----------------------------------NELIDAFVKSGDFNNAFQVL 277
Query: 406 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 465
+ M + + SW +++TGYV+ EA F + +R D +L +L A++ L +
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 466 AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA 525
+H ++ + V ++LI Y+KCG L A +F M + L WN M+ YA
Sbjct: 338 WGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYA 397
Query: 526 MHGNYAEVLKLFNHMKLGN-IKPDELTFTSILTACSHSGL-VEEGLQIFRSMIREYTIVP 583
+G+ E +KLFN +K +KPD TF ++L CSH + +E L F MI EY I P
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 584 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 643
H +I + + G++ +A +++ + A LL AC D + + +A ++
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKM 517
Query: 644 LKLEPRNSSS--YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
++L + Y+++SN+ A RW EV IR + ++ + G S I+
Sbjct: 518 IELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/571 (25%), Positives = 250/571 (43%), Gaps = 62/571 (10%)
Query: 24 VLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIR 83
VLR ++L N D S + L+ G + +++H K S+ + +SL+R
Sbjct: 39 VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMR 98
Query: 84 LYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSG----GSCVYGAFRIASTMQDQRL 139
Y LEDAH+VFDE+ + D++++ S+++ Y SG G C++ + +
Sbjct: 99 FYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLF------LELHRSDV 152
Query: 140 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 199
+PN + + L A A+L G IH ++ G + + L+DMY KCG + A
Sbjct: 153 FPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAV 212
Query: 200 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
VF M T SWN ++A+ NG+ F QM P+
Sbjct: 213 LVFQHMEEKDTV--SWNAIVASCSRNGKLELGLWFFHQM------PN------------- 251
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 318
PD V L+D + K D A ++ + N ++ +N +
Sbjct: 252 --------------------PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTI 291
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 378
+TGY+ ++ EA F +M V + +++AV+ L + IH +
Sbjct: 292 LTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGL 351
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 438
+RV +A+ +I Y+KCG L++A L+F M ++L+ W MI+GY +G EAI LF
Sbjct: 352 DSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQ 411
Query: 439 LQREN-LRIDSVTLISLLQALSQ----LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 493
L++E L+ D T ++LL S + + E+ YR E SLI
Sbjct: 412 LKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCC--SLIRAM 469
Query: 494 AKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELT 551
+ G++ A+ + Q+ +W A+LGA + + + M +LG+ DE
Sbjct: 470 GQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYL 529
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
+ + ++ E QI R ++RE ++
Sbjct: 530 YIVMSNLYAYHERWREVGQI-RKIMRESGVL 559
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 171/442 (38%), Gaps = 82/442 (18%)
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
++ + SW+ ++ A G ++ ++I+ PD L + + Y+
Sbjct: 16 GSTASSNSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLC 74
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 325
+ +HGY+ + G + +L+ Y D + A K+F+ + + D + +N +++GY+++
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEI 384
E I +F E+ + V PN F ++A + L L IH +++ V +
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
N +I Y KCG++ A LVF M +D VSW +++ +G ++ + F +
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP-- 252
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 504
D+VT N LI + K G N A
Sbjct: 253 --DTVTY-----------------------------------NELIDAFVKSGDFNNAFQ 275
Query: 505 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT----------- 553
+ M +SWN +L Y E + F M ++ DE + +
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 554 ----SILTACSHS--------------------GLVEEGLQIFRSMIREYTIVPGEVHYN 589
S++ AC+H G+++ +F +M R+ IV +N
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIV-----WN 390
Query: 590 CIIDLLSRAGQLTEAYNLVKSM 611
+I +R G EA L +
Sbjct: 391 EMISGYARNGDSIEAIKLFNQL 412
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 22 GEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSL 81
GE + + +S D ++++ L + AL + +G +H + KL L+S V S+L
Sbjct: 302 GEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASAL 361
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR-LY 140
I +YS+ G L+ A +F + K+L+ + +I+ YA +G S A ++ + ++ +R L
Sbjct: 362 IDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSI--EAIKLFNQLKQERFLK 419
Query: 141 PNRVTLVSLL 150
P+R T ++LL
Sbjct: 420 PDRFTFLNLL 429
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 222/443 (50%), Gaps = 42/443 (9%)
Query: 297 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
+ A K+F+ + D + ++ ++K VEA F ++ + + PN F +I +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 357 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 416
+ RD++L + +H Y L+ + V + + +++ Y K L AR F+ R ++VS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 417 TSMITGYVHHGHIDEAIILFRLLQ-------------------------------RENLR 445
T++I+GY+ +EA+ LFR + RE +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 446 I-DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV--NNSLITTYAKCGKLNMA 502
I + T + A+S + A K +H + F GK +V NSLI+ Y+KCG + +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIK-FLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 503 RYLFQQMTE--RCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTAC 559
F ++ E R + SWN+M+ YA +G E + +F M K N++P+ +T +L AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 560 SHSGLVEEGLQIFRSMIREY---TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 616
+H+GL++EG F + +Y ++ E HY C++D+LSR+G+ EA L+KSMP
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELE-HYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 617 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 676
LL C+++ + + + A +IL+L+PR+ SSYV++SN + W V+ IR
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 677 TKDKELKSTPGYSLIELDKQREV 699
K+ LK G S IE+ Q V
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRV 483
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 175/357 (49%), Gaps = 49/357 (13%)
Query: 218 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 277
+I ++ + +EA + F++++ + P+ T I S + GK +H Y ++MG
Sbjct: 64 VIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMG 123
Query: 278 VEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND---------- 326
+ ++ +A+++ Y K +T AR+ F+ R+ + V +++GYLK
Sbjct: 124 LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFR 183
Query: 327 -LPV--------------------EAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIR 364
+P EA+N F +M++ V PN + F I+A+S++
Sbjct: 184 AMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG 243
Query: 365 LARSIHGYVLRHQYITR---VEIANQIIHTYAKCGYLQYARLVFNRM--RSRDLVSWTSM 419
+SIH ++ ++ + V + N +I Y+KCG ++ + L FN++ R++VSW SM
Sbjct: 244 AGKSIHACAIK--FLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSM 301
Query: 420 ITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQA-----LSQLGCLSAVKEVHCL 473
I GY H+G +EA+ +F ++++ NLR ++VT++ +L A L Q G + K V+
Sbjct: 302 IWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVN-- 359
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 529
Y + EL ++ ++ G+ A L + M + + W A+LG +H N
Sbjct: 360 DYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 416
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 144/329 (43%), Gaps = 51/329 (15%)
Query: 7 SITGNLVASCRRRHYGEVLRRYL--DLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHV 64
++ G V R + +R L ++ ++F+ + S ++ GK++H
Sbjct: 63 AVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGT-----VIGSSTTSRDVKLGKQLHC 117
Query: 65 DSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHS----- 119
++K+ L S+ FVGS+++ Y + L DA R FD+ + ++V+ T++I+ Y
Sbjct: 118 YALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEE 177
Query: 120 --------------GGSCVYGAFR-----------IASTMQDQRLYPNRVTLVSLLHAAA 154
+ V G F +++ + PN T + A +
Sbjct: 178 ALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAIS 237
Query: 155 KLGSLQEGRAIHGYAIR---RGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
+ S G++IH AI+ + F V +L+ Y KCG ++ + F K+
Sbjct: 238 NIASHGAGKSIHACAIKFLGKRFNV---FVWNSLISFYSKCGNMEDSLLAFNKLEEEQRN 294
Query: 212 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCA-----ELDYLCH 265
+ SWN +I Y HNG+ EA +F +M+ L P+ +T+ + +C + Y+
Sbjct: 295 IVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYF 354
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSK 294
K+++ Y +E + AC +VD+ S+
Sbjct: 355 NKAVNDYDDPNLLELEHYAC--MVDMLSR 381
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 54/309 (17%)
Query: 91 LEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY-----PNRVT 145
+ +AH+VFDEI D+++ T++I G V + + ++ +RL PN T
Sbjct: 43 IRNAHKVFDEIPELDVISATAVI-------GRFVKESRHVEASQAFKRLLCLGIRPNEFT 95
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE----------------------- 182
+++ ++ ++ G+ +H YA++ G+ +F
Sbjct: 96 FGTVIGSSTTSRDVKLGKQLHCYALK--MGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 183 ---------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 233
T L+ Y K + A ++F M S V +WN +I + G+ EA
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERS--VVTWNAVIGGFSQTGRNEEAVN 211
Query: 234 LFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDL 291
F M+ V+P+ T AI + + + GKSIH I+ +G ++ +L+
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISF 271
Query: 292 YSKF-DVTKARKMFERL--RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNV 347
YSK ++ + F +L ++ V +N M+ GY N EA+ +F +M+K ++ PN
Sbjct: 272 YSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNN 331
Query: 348 ALFLNLISA 356
L ++ A
Sbjct: 332 VTILGVLFA 340
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 208/438 (47%), Gaps = 39/438 (8%)
Query: 293 SKFDVTKARKMFERLRNKDAVIYN-VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
SK V+ A +F + N +N ++ L + + F EM + SV P+ F
Sbjct: 60 SKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFP 119
Query: 352 NLISAVSDLR--DIRLARSIHGYVLRHQYITRVEIANQIIHTYA---------------- 393
+ A + + D+ L +++H LR ++ + N +I Y+
Sbjct: 120 FVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENP 179
Query: 394 ---------------KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 438
K + AR +F+ M RDLVSW S+I+GY H EAI LF
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 439 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 498
+ L+ D+V ++S L A +Q G K +H T R + + L+ YAKCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 499 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 558
++ A +F+ +++ L +WNAM+ AMHGN + F M IKPD +TF S+L
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 559 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 618
CSHSGLV+E +F M Y + HY C+ DLL RAG + EA +++ MP +
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 619 ----ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 674
A LL CR++G+ EI E A ++ L P + Y ++ + A RW+EV +R
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVR 479
Query: 675 A-MTKDKELKSTPGYSLI 691
+ +DK++K G+S +
Sbjct: 480 EIIDRDKKVKKNVGFSKV 497
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 168/388 (43%), Gaps = 43/388 (11%)
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLI-AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
V A +VF + ST +N +I LH +L + F +M R V PD T
Sbjct: 64 VSYATSVFRFITNPSTFC--FNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFV 121
Query: 254 ILSCAELDY--LCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD----- 296
+CA L K++H +R G+ D+ L+ +YS FD
Sbjct: 122 FKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR 181
Query: 297 -----------------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
+ +AR++F+ + +D V +N +++GY + + EAI +F EM+
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 340 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 399
+ + P+ ++ +SA + D + ++IH Y R + +A ++ YAKCG++
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 400 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 459
A +F + L +W +MITG HG+ + + FR + ++ D VT IS+L S
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 460 QLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKCGKLNMARYLFQQMTE-----RC 513
G + + + + +E+ + + G + A + +QM +
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
L +W+ +LG +HGN K N +K
Sbjct: 422 LLAWSGLLGGCRIHGNIEIAEKAANRVK 449
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 26 RRYLDLKNSKFSLDCSAITLCLKSCVAL--GRLEFGKRVHVDSIKLNLNSDCFVGSSLIR 83
R +++++ D K+C A G L K +H +++ L SD F ++LIR
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 84 LYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAH--------------------SGGSC 123
+YS ++ A ++FDE +D+V Y +I S S
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 124 VYG---------AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF 174
+ G A ++ M L P+ V +VS L A A+ G Q+G+AIH Y R+
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 175 GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 234
+ D T L+D Y KCG + A +F + T+ +WN +I +G +
Sbjct: 281 FI-DSFLATGLVDFYAKCGFIDTAMEIFEL--CSDKTLFTWNAMITGLAMHGNGELTVDY 337
Query: 235 FRQMIHRKVLPDLLTLANAILSCA 258
FR+M+ + PD +T + ++ C+
Sbjct: 338 FRKMVSSGIKPDGVTFISVLVGCS 361
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 157/381 (41%), Gaps = 48/381 (12%)
Query: 94 AHRVFDEITNKDLVAYTSII-TAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
A VF ITN + +II H S F + M+ + + P+ T + A
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFV--EMRRRSVPPDFHTFPFVFKA 124
Query: 153 --AAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAAVFGKMNATS 209
A K G L + +H A+R FG+ ++F TL+ +Y + A +F + N
Sbjct: 125 CAAKKNGDLTLVKTLHCQALR--FGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE-NPQR 181
Query: 210 TTVG------------------------------SWNPLIAAYLHNGQALEAFELFRQMI 239
V SWN LI+ Y EA +LF +M+
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VT 298
+ PD + + + + +CA+ GK+IH Y R + D T LVD Y+K +
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 299 KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
A ++FE +K +N M+TG + ++ F +M+ + P+ F++++ S
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFNRM-----RSR 411
+ AR++ +R Y E+ + + + G ++ A + +M
Sbjct: 362 HSGLVDEARNLFDQ-MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNRE 420
Query: 412 DLVSWTSMITGYVHHGHIDEA 432
L++W+ ++ G HG+I+ A
Sbjct: 421 KLLAWSGLLGGCRIHGNIEIA 441
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 20 HYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGS 79
H E ++ + ++ D AI L +C G + GK +H + + L D F+ +
Sbjct: 229 HCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLAT 288
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA-HSGGSCVYGAFRIASTMQDQR 138
L+ Y++ G ++ A +F+ ++K L + ++IT A H G FR M
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFR---KMVSSG 345
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGR 163
+ P+ VT +S+L + G + E R
Sbjct: 346 IKPDGVTFISVLVGCSHSGLVDEAR 370
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 257/516 (49%), Gaps = 49/516 (9%)
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
SW L+ + + E +++ M + + P + + + +C +++ + GK IH
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 274 IRMGVEPDMVACTALVDLYSK----------FD----------------------VTKAR 301
++ G+ + T LV LYS+ FD + +AR
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 302 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDL 360
++F+++ KDAV +N++++ Y K A ++F M +K S N+ LI +
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI-----LIGGYVNC 245
Query: 361 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 420
R+++LAR+ + + ++ + +I Y K G +Q A +F M +D + + +MI
Sbjct: 246 REMKLARTYFDAMPQKNGVSWI----TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 421 TGYVHHGHIDEAIILF-RLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 478
Y +G +A+ LF ++L+R + ++ D +TL S++ A SQLG S V +Y
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE--SYITE 359
Query: 479 HGKELS--VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 536
HG ++ ++ SLI Y K G A +F + ++ S++AM+ ++G E L
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F M I P+ +TFT +L+A SHSGLV+EG + F SM +++ + P HY ++D+L
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLG 478
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 656
RAG+L EAY L+KSMP ++ LL A L+ + E GE +KLE +
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSH 538
Query: 657 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 692
++ I + GRWD+ +R K+K+L T G S +E
Sbjct: 539 LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 37/371 (9%)
Query: 17 RRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCF 76
+ R + E + Y+D+ NS A+T L++C + + GK +H ++K L +
Sbjct: 81 QHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVY 140
Query: 77 VGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQD 136
V + L+ LYS G +E A + FD+I K+ V++ S++ Y S G A + D
Sbjct: 141 VQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLES------GELDEARRVFD 194
Query: 137 QRLYPNRVTLVSLLHAAAKLGSLQEGRA----------------IHGYAIRRGFGVCDEI 180
+ + V+ ++ + AK G + + I GY R +
Sbjct: 195 KIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTY 254
Query: 181 FET----------TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALE 230
F+ T++ Y K G V+ A +F M+ V ++ +IA Y NG+ +
Sbjct: 255 FDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV--YDAMIACYTQNGKPKD 312
Query: 231 AFELFRQMIHRK--VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 288
A +LF QM+ R + PD +TL++ + + ++L G + Y+ G++ D + T+L
Sbjct: 313 ALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSL 372
Query: 289 VDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
+DLY K D KA KMF L KD V Y+ M+ G N + EA ++F MI+ + PNV
Sbjct: 373 IDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNV 432
Query: 348 ALFLNLISAVS 358
F L+SA S
Sbjct: 433 VTFTGLLSAYS 443
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 5/195 (2%)
Query: 32 KNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKL 91
+NS D ++ + + LG FG V + + D + +SLI LY + G
Sbjct: 323 RNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDF 382
Query: 92 EDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLH 151
A ++F + KD V+Y+++I +G + A + + M ++++ PN VT LL
Sbjct: 383 AKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE--ANSLFTAMIEKKIPPNVVTFTGLLS 440
Query: 152 AAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTT 211
A + G +QEG + + ++DM + G ++ A + M
Sbjct: 441 AYSHSGLVQEGYKCFNSMKDHNLEPSADHY-GIMVDMLGRAGRLEEAYELIKSM-PMQPN 498
Query: 212 VGSWNP-LIAAYLHN 225
G W L+A+ LHN
Sbjct: 499 AGVWGALLLASGLHN 513
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 230/443 (51%), Gaps = 15/443 (3%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTK----ARKMFERLRNKDAVIYNVMMTG 321
KS H I G+ + A + L+ + ++ K A +F+ + ++ +Y+ M+
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 322 YLKNDLPVEAINVFHEMIKMS---VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ- 377
++ P + F M+K ++P+ F LI A + + IH +V+++
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
+++ + ++ Y + L AR VF+ + D+V W ++ GYV G E + +FR
Sbjct: 148 FLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFR 207
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-CLTYRAFHGKELSVNNSLITTYAKC 496
+ + L D ++ + L A +Q+G L+ K +H + +++ ++ V +L+ YAKC
Sbjct: 208 EMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKC 267
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-IKPDELTFTSI 555
G + A +F+++T R + SW A++G YA +G + + ++ + IKPD + +
Sbjct: 268 GCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGV 327
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
L AC+H G +EEG + +M Y I P HY+CI+DL+ RAG+L +A NL++ MP
Sbjct: 328 LAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKP 387
Query: 616 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRN----SSSYVLISNILAEGGRWDEVA 671
++ LL+ CR + + E+GE K +L LE N ++ V +SNI R E +
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAS 447
Query: 672 HIRAMTKDKELKSTPGYSLIELD 694
+R M + + ++ TPG+S++E+D
Sbjct: 448 KVRGMIEQRGVRKTPGWSVLEVD 470
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 164/337 (48%), Gaps = 9/337 (2%)
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACT 286
L F L + + P LT I++C + + GK IH ++++ GV D T
Sbjct: 97 GLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQT 156
Query: 287 ALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 345
++ +Y + + ARK+F+ + D V ++V+M GY++ L E + VF EM+ + P
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 346 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYARLV 404
+ ++A + + + + IH +V + +I + V + ++ YAKCG ++ A V
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 405 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQLGC 463
F ++ R++ SW ++I GY +G+ +A+ L+RE+ ++ DSV L+ +L A + G
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 464 LSAVKE-VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAML 521
L + + + R + + ++ + G+L+ A L ++M + L S W A+L
Sbjct: 337 LEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Query: 522 GAYAMHGNY---AEVLKLFNHMKLGNIKPDELTFTSI 555
H N +K ++ GN++ +E +
Sbjct: 397 NGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 15/285 (5%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLN-SDCFVGSSLIRLYSEYGKLEDAHRVFDEI 101
I CLK+C GK++H +K + SD V + ++R+Y E L DA +VFDEI
Sbjct: 123 IVACLKACF----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEI 178
Query: 102 TNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQ 160
D+V + ++ Y G GS FR M + L P+ ++ + L A A++G+L
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFR---EMLVKGLEPDEFSVTTALTACAQVGALA 235
Query: 161 EGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIA 220
+G+ IH + ++ + D T L+DMY KCG ++ A VF K+ T V SW LI
Sbjct: 236 QGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL--TRRNVFSWAALIG 293
Query: 221 AYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGYM-IRMGV 278
Y G A +A ++ + PD + L + +CA +L G+S+ M R +
Sbjct: 294 GYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEI 353
Query: 279 EPDMVACTALVDLYSKFD-VTKARKMFERLRNKD-AVIYNVMMTG 321
P + +VDL + + A + E++ K A ++ ++ G
Sbjct: 354 TPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 179/306 (58%), Gaps = 6/306 (1%)
Query: 388 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 447
++ Y+K G L A +F+ M RD+ SW ++I G V EA+ L++ ++ E +R
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS 209
Query: 448 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQ 507
VT+++ L A S LG VKE + + + + V+N+ I Y+KCG ++ A +F+
Sbjct: 210 EVTVVAALGACSHLG---DVKEGENI-FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFE 265
Query: 508 QMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 566
Q T ++ + +WN M+ +A+HG L++F+ ++ IKPD++++ + LTAC H+GLVE
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 567 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
GL +F +M + + HY C++DLLSRAG+L EA++++ SM +LL A
Sbjct: 326 YGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Query: 627 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTP 686
+Y D E+ E +++I ++ N +VL+SN+ A GRW +V +R + K++K P
Sbjct: 385 SEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIP 444
Query: 687 GYSLIE 692
G S IE
Sbjct: 445 GLSYIE 450
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
+D + LK+C ++H + L++D + ++L+ YS+ G L A+++
Sbjct: 107 VDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 98 FDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLG 157
FDE+ +D+ ++ ++I G+ A + M+ + + + VT+V+ L A + LG
Sbjct: 167 FDEMPVRDVASWNALIAGLV--SGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
Query: 158 SLQEGRAI-HGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 216
++EG I HGY+ + I +DMY KCG V A VF + + V +WN
Sbjct: 225 DVKEGENIFHGYSND------NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVV-TWN 277
Query: 217 PLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 276
+I + +G+A A E+F ++ + PD ++ A+ +C + +G S+ M
Sbjct: 278 TMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK 337
Query: 277 GVEPDMVACTALVDLYSK 294
GVE +M +VDL S+
Sbjct: 338 GVERNMKHYGCVVDLLSR 355
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 208/420 (49%), Gaps = 36/420 (8%)
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
R K +YN ++ YL ++ +F M+ V PN F +LI A +
Sbjct: 47 RWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV 106
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN--------------------- 406
++HG L+ ++ + + Y + G L+ +R +F+
Sbjct: 107 ALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNG 166
Query: 407 ----------RMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRI--DSVTLIS 453
RM D+VSWT++I G+ G +A+++F ++Q E I + T +S
Sbjct: 167 EMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 454 LLQALSQL--GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 511
+L + + G + K++H ++ +L+ Y K G L MA +F Q+ +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 512 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
+ + +WNA++ A A +G + L++F MK + P+ +T +ILTAC+ S LV+ G+Q+
Sbjct: 287 KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Query: 572 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 631
F S+ EY I+P HY C++DL+ RAG L +A N ++S+P ++ L LL AC+++
Sbjct: 347 FSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHE 406
Query: 632 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 691
+TE+G + KQ++ L+P++ YV +S A W E +R + ++ P YS++
Sbjct: 407 NTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 37/283 (13%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
+N LI +YL G+ + LF M+ V P+ LT + I + + +G ++HG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 275 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK----------------------- 310
+ G D T+ V Y + D+ +RKMF+ + N
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 311 --------DAVIYNVMMTGYLKNDLPVEAINVFHEMI---KMSVSPNVALFLNLISAVS- 358
D V + ++ G+ K L +A+ VF EMI + ++PN A F++++S+ +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 359 -DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 417
D IRL + IHGYV+ + I + ++ Y K G L+ A +F+++R + + +W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 418 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
++I+ +G +A+ +F +++ + + +TL+++L A ++
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACAR 336
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 47/251 (18%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK-- 104
+K+ + + +G +H ++K D FV +S +R Y E G LE + ++FD+I N
Sbjct: 93 IKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCV 152
Query: 105 -----------------------------DLVAYTSIITAYA----HSGGSCVYGAFRIA 131
D+V++T++I ++ H+ V+G
Sbjct: 153 VACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM--- 209
Query: 132 STMQDQR--LYPNRVTLVSLLHAAAKL--GSLQEGRAIHGYAIRRGFGVCDEIFETTLLD 187
+Q++R + PN T VS+L + A G ++ G+ IHGY + + + T LLD
Sbjct: 210 --IQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI-ILTTTLGTALLD 266
Query: 188 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
MY K G ++MA +F ++ V +WN +I+A NG+ +A E+F M V P+
Sbjct: 267 MYGKAGDLEMALTIFDQIR--DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNG 324
Query: 248 LTLANAILSCA 258
+TL + +CA
Sbjct: 325 ITLLAILTACA 335
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 226/443 (51%), Gaps = 15/443 (3%)
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTK----ARKMFERLRNKDAVIYNVMMTG 321
KS H I G+ + A + L+ + ++ K A +F+ + ++ +Y+ M+
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 322 YLKNDLPVEAINVFHEMIKM---SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ- 377
++ P + F M+K ++P+ F LI A + + IH +V+++
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 437
+++ + ++ Y + L AR VF+ + D+V W ++ GYV G E + +F+
Sbjct: 148 FLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFK 207
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA-FHGKELSVNNSLITTYAKC 496
+ + D ++ + L A +Q+G L+ K +H + + ++ V +L+ YAKC
Sbjct: 208 EMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKC 267
Query: 497 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-IKPDELTFTSI 555
G + A +F+++T R + SW A++G YA +G + + ++ + IKPD + +
Sbjct: 268 GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGV 327
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
L AC+H G +EEG + +M Y I P HY+CI+DL+ RAG+L +A +L++ MP
Sbjct: 328 LAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKP 387
Query: 616 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRN----SSSYVLISNILAEGGRWDEVA 671
++ LL+ CR + + E+GE + +L LE N ++ V +SNI R E
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAF 447
Query: 672 HIRAMTKDKELKSTPGYSLIELD 694
+R M + + ++ TPG+SL+E+D
Sbjct: 448 KVRGMIEQRGIRKTPGWSLLEVD 470
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 167/341 (48%), Gaps = 29/341 (8%)
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACT 286
L F L + + P LT I++C + + GK IH ++++ GV D T
Sbjct: 97 GLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQT 156
Query: 287 ALVDLYSK----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
++ +Y + FD ARK+F+ + D V ++V+M GY++ L E + VF EM+
Sbjct: 157 GVLRIYVEDKLLFD---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG 213
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYA 401
+ P+ ++A + + + + IH +V + ++I + V + ++ YAKCG ++ A
Sbjct: 214 IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETA 273
Query: 402 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQ 460
VF ++ R++ SW ++I GY +G+ +A ++RE+ ++ DSV L+ +L A +
Sbjct: 274 VEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH 333
Query: 461 LGCLSAVKEV-------HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
G L + + + +T + H + ++ + G+L+ A L ++M +
Sbjct: 334 GGFLEEGRTMLENMEARYGITPKHEH------YSCIVDLMCRAGRLDDALDLIEKMPMKP 387
Query: 514 LTS-WNAMLGAYAMHGNYA----EVLKLFNHMKLGNIKPDE 549
L S W A+L H N V L + ++ GN++ +E
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVQNLLD-LEKGNVEEEE 427
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 43 ITLCLKSCVALGRLEFGKRVHVDSIKLNLN-SDCFVGSSLIRLYSEYGKLEDAHRVFDEI 101
I CLK+C GK++H +K + SD V + ++R+Y E L DA +VFDEI
Sbjct: 123 IVACLKACF----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEI 178
Query: 102 TNKDLVAYTSIITAYAHSG-GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQ 160
D+V + ++ Y G GS + M + + P+ ++ + L A A++G+L
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGS---EGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALA 235
Query: 161 EGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIA 220
+G+ IH + ++ + D T L+DMY KCG ++ A VF K+ T V SW LI
Sbjct: 236 QGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL--TRRNVFSWAALIG 293
Query: 221 AYLHNGQALEAFELFRQMIHRK--VLPDLLTLANAILSCAELDYLCHGKSIHGYM-IRMG 277
Y G A +A + I R+ + PD + L + +CA +L G+++ M R G
Sbjct: 294 GYAAYGYAKKATTCLDR-IEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 278 VEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD-AVIYNVMMTG 321
+ P + +VDL + + A + E++ K A ++ ++ G
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 168/311 (54%), Gaps = 5/311 (1%)
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENL 444
N +I G + A +M +R +VSWT++I GY EAI+LF R++ + +
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+ + +T++++L A+ LG L VH + R F ++ V NSLI YAKCG + A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 504 YLFQQMTE--RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 561
F ++ + L SW M+ A+A+HG E + +F M+ +KP+ +T S+L ACSH
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH 372
Query: 562 SGLVEEG-LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
GL EE L+ F +M+ EY I P HY C++D+L R G+L EA + +P +
Sbjct: 373 GGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVW 432
Query: 621 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 680
LL AC +Y D E+ E + +++++LE + YVL+SNI GR+ + R +
Sbjct: 433 RMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Query: 681 ELKSTPGYSLI 691
+ PG+S +
Sbjct: 493 GVAKLPGHSQV 503
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMI-------HRKVLPDLLTLANAIL----SCAELDYL 263
+NPL+ Y L A+ L+ Q+ H K LP + L S L
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 264 CHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTG- 321
G +HG +++G E + TALV +Y ++ A K+F+ + ++ V +NVM+TG
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGL 199
Query: 322 ------------------------------YLKNDLPVEAINVFHEMIKM-SVSPNVALF 350
Y + D P EAI +F M+ ++ PN
Sbjct: 200 TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITI 259
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMR 409
L ++ AV +L D+++ S+H YV + ++ + + N +I YAKCG +Q A F +
Sbjct: 260 LAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP 319
Query: 410 S--RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
+ ++LVSWT+MI+ + HG EA+ +F+ ++R L+ + VT+IS+L A S G
Sbjct: 320 NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 40/289 (13%)
Query: 68 KLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG------ 121
KL S +V ++L+ +Y G + DAH+VFDE+ ++ V + +IT + G
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 122 --------------SCVYGAFRIASTMQDQRLY----------PNRVTLVSLLHAAAKLG 157
+ + G R+ + L+ PN +T++++L A LG
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 158 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNP 217
L+ ++H Y +RGF CD +L+D Y KCG ++ A F ++ + SW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 218 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC-----AELDYLCHGKSIHGY 272
+I+A+ +G EA +F+ M + P+ +T+ + + +C AE ++L + +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFL---EFFNTM 387
Query: 273 MIRMGVEPDMVACTALVD-LYSKFDVTKARKM-FERLRNKDAVIYNVMM 319
+ + PD+ LVD L K + +A K+ E + AV++ +++
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 196/392 (50%), Gaps = 37/392 (9%)
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVI 314
+C+ L K IH +I+ + D + L+ + S F T+ A +F +L++
Sbjct: 29 TCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFT 85
Query: 315 YNVMMTGYLKNDLPVEAINVF-HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+N+M+ N P EA+ +F MI + F +I A IRL +HG
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS--------------- 418
++ + V N ++ Y KCG R VF++M R +VSWT+
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 419 ----------------MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
MIT YV + DEA LFR +Q ++++ + T+++LLQA +QLG
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
LS + VH ++ + + +LI Y+KCG L AR +F M + L +WN+M+
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 523 AYAMHGNYAEVLKLF-NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 581
+ +HG E L LF + +++PD +TF +L+AC+++G V++GL+ F MI+ Y I
Sbjct: 326 SLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
Query: 582 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 613
P H C+I LL +A ++ +A NLV+SM S
Sbjct: 386 SPIREHNACMIQLLEQALEVEKASNLVESMDS 417
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 165/351 (47%), Gaps = 40/351 (11%)
Query: 47 LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL 106
L++C +L K++H IK NL +D + LI + S +G+ + A VF+++ +
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 107 VAYTSIITAYA--HSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
+ +I + + H + + + Q Q ++ T ++ A S++ G
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQF---DKFTFPFVIKACLASSSIRLGTQ 140
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST-------------- 210
+HG AI+ GF D F+ TL+D+Y KCG VF KM S
Sbjct: 141 VHGLAIKAGF-FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS 199
Query: 211 ---------------TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
V SW +I AY+ N + EAF+LFR+M V P+ T+ N +
Sbjct: 200 QLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQ 259
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 314
+ +L L G+ +H Y + G D TAL+D+YSK + ARK+F+ ++ K
Sbjct: 260 ASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLAT 319
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKM-SVSPNVALFLNLISAVSDLRDIR 364
+N M+T + EA+++F EM + SV P+ F+ ++SA ++ +++
Sbjct: 320 WNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 37/334 (11%)
Query: 163 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 222
+ IH I+ D++ L+ + G + A+ VF ++ + ST +WN +I +
Sbjct: 37 KQIHTKIIKHNL-TNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTF--TWNLMIRSL 93
Query: 223 LHNGQALEAFELF-RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
N + EA LF MI + D T I +C + G +HG I+ G D
Sbjct: 94 SVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFND 153
Query: 282 MVACTALVDLYSK----------FDVTKARKM----------------------FERLRN 309
+ L+DLY K FD R + F ++
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 310 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 369
++ V + M+T Y+KN P EA +F M V PN +NL+ A + L + + R +
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV 273
Query: 370 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 429
H Y ++ ++ + +I Y+KCG LQ AR VF+ M+ + L +W SMIT HG
Sbjct: 274 HDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCG 333
Query: 430 DEAIILFRLLQRE-NLRIDSVTLISLLQALSQLG 462
+EA+ LF ++ E ++ D++T + +L A + G
Sbjct: 334 EEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
D +K+C+A + G +VH +IK +D F ++L+ LY + GK + +V
Sbjct: 117 FDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 98 FDEITNK-------------------------------DLVAYTSIITAYAHSGGSCVYG 126
FD++ + ++V++T++ITAY +
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPD--E 234
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
AF++ MQ + PN T+V+LL A+ +LGSL GR +H YA + GF V D T L+
Sbjct: 235 AFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGF-VLDCFLGTALI 293
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLP 245
DMY KCG ++ A VF M S + +WN +I + +G EA LF +M V P
Sbjct: 294 DMYSKCGSLQDARKVFDVMQGKS--LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEP 351
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK-FDVTKARKM 303
D +T + +CA + G MI++ G+ P ++ L + +V KA +
Sbjct: 352 DAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNL 411
Query: 304 FERL 307
E +
Sbjct: 412 VESM 415
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 7 SITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDS 66
S T + A + R E + + ++ + I L++ LG L G+ VH +
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYA-HSGGSCVY 125
K DCF+G++LI +YS+ G L+DA +VFD + K L + S+IT+ H G
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 126 GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEG-----RAIHGYAI 170
F + P+ +T V +L A A G++++G R I Y I
Sbjct: 338 SLFEEMEEEAS--VEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 172/311 (55%), Gaps = 8/311 (2%)
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI-ILFRLLQRENL 444
N II + K G A+ V +++++W MI GYV + +EA+ L +L ++
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLNMA 502
+ + + S L A ++LG L K VH L + G EL+ ++++L+ YAKCG + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDS--GIELNAILSSALVDVYAKCGDIGTS 219
Query: 503 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 562
R +F + ++ WNAM+ +A HG E +++F+ M+ ++ PD +TF +LT CSH
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 563 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 622
GL+EEG + F M R ++I P HY ++DLL RAG++ EAY L++SMP +
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 623 LLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 682
LLS+ R Y + E+GE IA Q L S YVL+SNI + +W+ +R + + +
Sbjct: 340 LLSSSRTYKNPELGE-IAIQ--NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 683 KSTPGYSLIEL 693
+ G S +E
Sbjct: 397 RKAKGKSWLEF 407
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 9/251 (3%)
Query: 175 GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 234
GVC+ +++ K G +A V NA+ V +WN +I Y+ N Q EA +
Sbjct: 97 GVCNI---NLIIESLMKIGESGLAKKVL--RNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 235 FRQMIH-RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS 293
+ M+ + P+ + A+++ +CA L L H K +H MI G+E + + +ALVD+Y+
Sbjct: 152 LKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYA 211
Query: 294 KF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
K D+ +R++F ++ D I+N M+TG+ + L EAI VF EM VSP+ FL
Sbjct: 212 KCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLG 271
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYARLVFNRMR-S 410
L++ S + + G + R I ++E ++ + G ++ A + M
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 411 RDLVSWTSMIT 421
D+V W S+++
Sbjct: 332 PDVVIWRSLLS 342
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVS 358
A+K+ +++ + +N+M+ GY++N EA+ M+ + + PN F + ++A +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
L D+ A+ +H ++ +++ ++ YAKCG + +R VF ++ D+ W +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 478
MITG+ HG EAI +F ++ E++ DS+T + LL S G L KE L R F
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 479 H-GKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 529
+L +++ + G++ A L + M E + W ++L + + N
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKN 349
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
PN+ + S L A A+LG L + +H I G + + I + L+D+Y KCG + +
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL-NAILSSALVDVYAKCGDIGTSRE 221
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
VF + ++ WN +I + +G A EA +F +M V PD +T + +C+
Sbjct: 222 VFYSVKRNDVSI--WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 261 DYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NKDAVIYNV 317
L GK G M R ++P + A+VDL + V +A ++ E + D VI+
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 318 MMT 320
+++
Sbjct: 340 LLS 342
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 247/552 (44%), Gaps = 102/552 (18%)
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYP 141
+R S Y +L +FD +T ++ S+ + S R+ + P
Sbjct: 52 LRAPSYYTRL-----IFDSVTFPNVFVVNSMFKYF--SKMDMANDVLRLYEQRSRCGIMP 104
Query: 142 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 201
+ + ++ +A + G L + GF D ++DMY K V+ A V
Sbjct: 105 DAFSFPVVIKSAGRFGIL-----FQALVEKLGF-FKDPYVRNVIMDMYVKHESVESARKV 158
Query: 202 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
F +++ + WN +I+ Y G EA +LF M
Sbjct: 159 FDQISQRKGS--DWNVMISGYWKWGNKEEACKLFDMM----------------------- 193
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 320
E D+V+ T ++ ++K D+ ARK F+R+ K V +N M++
Sbjct: 194 ----------------PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLS 237
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI----------- 369
GY +N +A+ +F++M+++ V PN ++ +ISA S D L RS+
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL 297
Query: 370 -----------HGYVLRHQYITRV--EIANQ--------IIHTYAKCGYLQYARLVFNRM 408
H Q R+ E+ Q +I Y + G + AR +F+ M
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 409 RSRDLVSWTSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAV 467
R++VSW S+I GY H+G AI F ++ + + D VT+IS+L A + L
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL--- 414
Query: 468 KEVHCLTYRAFHGKELSVNNS----LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 523
E+ ++ +N+S LI YA+ G L A+ +F +M ER + S+N + A
Sbjct: 415 -ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTA 473
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
+A +G+ E L L + MK I+PD +T+TS+LTAC+ +GL++EG +IF+S IR P
Sbjct: 474 FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKS-IRN----P 528
Query: 584 GEVHYNCIIDLL 595
HY C +DLL
Sbjct: 529 LADHYAC-MDLL 539
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 47/393 (11%)
Query: 275 RMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN-KDAVIYNVMMTGYLKNDLPVEAIN 333
R G+ PD + ++ +F + + + E+L KD + NV+M Y+K++ A
Sbjct: 99 RCGIMPDAFSFPVVIKSAGRFGIL-FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARK 157
Query: 334 VFHEMIKMSVSP-NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 392
VF ++ + S NV +IS + A + + + ++ +I +
Sbjct: 158 VFDQISQRKGSDWNV-----MISGYWKWGNKEEACKLFDMMPENDVVS----WTVMITGF 208
Query: 393 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 452
AK L+ AR F+RM + +VSW +M++GY +G ++A+ LF + R +R + T +
Sbjct: 209 AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 453 SLLQALS--------------------QLGCL--SAVKEVHCL------TYRAFH----G 480
++ A S +L C +A+ ++H R F+
Sbjct: 269 IVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQ 328
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 540
+ L N++I+ Y + G ++ AR LF M +R + SWN+++ YA +G A ++ F M
Sbjct: 329 RNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Query: 541 -KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
G+ KPDE+T S+L+AC H +E G I IR+ I + Y +I + +R G
Sbjct: 389 IDYGDSKPDEVTMISVLSACGHMADLELGDCIV-DYIRKNQIKLNDSGYRSLIFMYARGG 447
Query: 600 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 632
L EA + M + TL +A GD
Sbjct: 448 NLWEAKRVFDEM-KERDVVSYNTLFTAFAANGD 479
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 149/323 (46%), Gaps = 49/323 (15%)
Query: 73 SDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAS 132
+D + +I +++ LE+A + FD + K +V++ ++++ YA +G + A R+ +
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFT--EDALRLFN 253
Query: 133 TMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE-------IFETTL 185
M + PN T V ++ A + R++ + DE +T L
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSL--------VKLIDEKRVRLNCFVKTAL 305
Query: 186 LDMYHKCGGVKMAAAVFGKMNATS------------TTVG------------------SW 215
LDM+ KC ++ A +F ++ T +G SW
Sbjct: 306 LDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSW 365
Query: 216 NPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
N LIA Y HNGQA A E F MI + PD +T+ + + +C + L G I Y+
Sbjct: 366 NSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR 425
Query: 275 RMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 333
+ ++ + +L+ +Y++ ++ +A+++F+ ++ +D V YN + T + N VE +N
Sbjct: 426 KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLN 485
Query: 334 VFHEMIKMSVSPNVALFLNLISA 356
+ +M + P+ + ++++A
Sbjct: 486 LLSKMKDEGIEPDRVTYTSVLTA 508
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 16/263 (6%)
Query: 12 LVASCRRRHYGEVLRRYLDLKNSK-FSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLN 70
++++C R + R + L + K L+C T L ++ +R+ + L
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE---LG 326
Query: 71 LNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRI 130
+ +++I Y+ G + A ++FD + +++V++ S+I YAH+G + + F
Sbjct: 327 TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF-- 384
Query: 131 ASTMQDQRLY----PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
+D Y P+ VT++S+L A + L+ G I Y + + D + +L+
Sbjct: 385 ---FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR-SLI 440
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD 246
MY + G + A VF +M V S+N L A+ NG +E L +M + PD
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERD--VVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Query: 247 LLTLANAILSCAELDYLCHGKSI 269
+T + + +C L G+ I
Sbjct: 499 RVTYTSVLTACNRAGLLKEGQRI 521
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 17/247 (6%)
Query: 400 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 459
Y RL+F+ + ++ SM + ++ + L+ R + D+ + ++++
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 460 QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNA 519
+ G L L + K+ V N ++ Y K + AR +F Q+++R + WN
Sbjct: 118 RFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 520 MLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 579
M+ Y GN E KLF+ M + D +++T ++T + +E + F M +
Sbjct: 173 MISGYWKWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 580 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM---PSTHSSAALCTLLSACRLYGDTEIG 636
V +N ++ ++ G +A L M + ++SAC D +
Sbjct: 229 V-----VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 637 EAIAKQI 643
++ K I
Sbjct: 284 RSLVKLI 290
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/537 (23%), Positives = 235/537 (43%), Gaps = 62/537 (11%)
Query: 97 VFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKL 156
V D ++V + ++I + G + AF + M+ + + P+ + +L+ K
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGE--MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 157 GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGS 214
G L G + A+ +G + +F +T+ D+Y K G + A+ V+ +M S V +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTI-DVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
+ LI +G+ EAF ++ Q++ R + P ++T ++ I + L G +++ MI
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 275 RMGVEPDMVACTALVDLYSK---------FDVTKARKMFERLRNKDAVIYNVMMTGYLKN 325
+MG PD+V LVD SK F V KM + + V++N ++ G+ +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV----KMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI-------RLARSIHGYVLRHQY 378
+ EA+ VF M + P+VA F ++ VS + D + + + R++
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMR-VSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Query: 379 ITRVEIANQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTSMITGYVHHGHIDEAII 434
+ + N +IH KC ++ A FN + D+V++ +MI GY +DEA
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 435 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 494
+F LL+ ++VTL L+ L + NN +
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCK-------------------------NNDMD---- 659
Query: 495 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 554
G + M + ++ ++ ++ ++ ++ + KLF M+ I P ++++
Sbjct: 660 --GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 555 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
I+ G V+E IF I + ++P V Y +I + G+L EA L + M
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 188/501 (37%), Gaps = 63/501 (12%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C+R + ++ D A + + G L G ++ ++ + D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEI----TNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
V SS I +Y + G L A V+ + + ++V YT +I G +Y AF +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR--IYEAFGMY 414
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
+ + + P+ VT SL+ K G+L+ G A++ I+ G+ D + L+D K
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP-DVVIYGVLVDGLSK 473
Query: 192 CGGVKMAAAVFGKMNATST--TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
G + A KM S V +N LI + + EA ++FR M + PD+ T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 250 LANAILSCAELDYLCH------GKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARK 302
+ D C G + M R + D+ C ++ L K + A K
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 303 MFERL----RNKDAVIYNVMMTGYL----------------------------------- 323
F L D V YN M+ GY
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
KN+ AI +F M + PN + L+ S DI + + + +
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMITGYVHHGHIDEAIILFRLL 439
+ II K G + A +F++ D+V++ +I GY G + EA +L+ +
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 440 QRENLRIDSVTLISLLQALSQ 460
R ++ D + L +ALS+
Sbjct: 774 LRNGVKPDDL----LQRALSE 790
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 141/608 (23%), Positives = 251/608 (41%), Gaps = 40/608 (6%)
Query: 82 IRLYSEYGKLEDAHRVFDEITNKDLV----AYTSIITAYAHSGGSCVYGAFRIASTMQDQ 137
I + S+ G +E A +FD + L+ AY S+I Y V + + M+ +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN--VRQGYELLVEMKKR 411
Query: 138 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC--DEIFETTLLDMYHKCGGV 195
+ + T +++ G L I I G C + + TTL+ + +
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTLIKTFLQNSRF 468
Query: 196 KMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
A V +M + + +N LI + EA +M+ + P+ T
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKA----RKMFERLR 308
I E M GV P+ V CT L++ Y K V +A R M ++
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 368
DA Y V+M G KND +A +F EM ++P+V + LI+ S L +++ A S
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYV 424
I ++ V I N ++ + + G ++ A+ + + M + L V++ ++I GY
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 484
G + EA LF ++ + L DS +L+ +L + + T + +
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTA 767
Query: 485 VNNSLITTYAKCGKLNMARYLFQQMTERCL--------TSWNAMLGAYAMHGNYAEVLKL 536
N+LI K GK + + ++ + ++N M+ GN +L
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F+ M+ N+ P +T+TS+L G E +F I I P + Y+ II+
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFL 886
Query: 597 RAGQLTEAYNLVKSMPSTHSSAALCTL-LSACRL-------YGDTEIGEAIAKQILKLEP 648
+ G T+A LV M + ++ C L +S CR G+ E+ E + + +++L+
Sbjct: 887 KEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946
Query: 649 RNSSSYVL 656
S+ V+
Sbjct: 947 IPDSATVI 954
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 167/406 (41%), Gaps = 34/406 (8%)
Query: 9 TGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIK 68
TG + C++ E Y + + D T+ + +++ + + +
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 69 LNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAF 128
+ D F LI +S+ G ++ A +FDE+ + L ++I GG C G
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP--NVIIYNMLLGGFCRSGEI 678
Query: 129 RIASTMQDQR----LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT 184
A + D+ L+PN VT +++ K G L E + +G V D TT
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL-VPDSFVYTT 737
Query: 185 LLDMYHKCGGVKMAAAVFG-KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
L+D + V+ A +FG +++ +N LI G+ E+ +++
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 244 LPDLLTLANAILSCAELDYLCH------GKSIHGYMIRMGVEPDMVACTALVDLYSKFDV 297
D N + +DYLC K + M + P ++ T+L++ Y K +
Sbjct: 798 --DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK--M 853
Query: 298 TKARKMFERLR-------NKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVAL 349
+ +MF D ++Y+V++ +LK + +A+ + +M K +V L
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 350 FLN----LISAVSDLRDIRLARSIHGYVLRHQYI----TRVEIANQ 387
++ L+S + + ++ +A + ++R QYI T +E+ N+
Sbjct: 914 SISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/562 (21%), Positives = 252/562 (44%), Gaps = 25/562 (4%)
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE- 182
V A + M R +P+ V LL A AK+ + I + G+ +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE--LVISLGEQMQTLGISHDLYTY 121
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
+ ++ + + + +A AV KM + + + L+ Y H+ + +A L QM+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 241 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTK 299
PD T I + ++ M++ G +PD+V +V+ L + D+
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 300 ARKMFERLRN----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
A + +++ D VIYN ++ G K +A+N+F EM + P+V + +LIS
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR---- 411
+ + A + ++ + V + +I + K G L A +++ M R
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV- 470
D+ +++S+I G+ H +DEA +F L+ ++ + VT +L++ + + E+
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE----RCLTSWNAMLGAYAM 526
++ R G ++ +LI + + + A+ +F+QM + ++N +L
Sbjct: 422 REMSQRGLVGNTVTYT-TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 586
+G A+ + +F +++ ++PD T+ ++ +G VE+G ++F ++ + + P +
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVI 539
Query: 587 HYNCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQI 643
YN +I R G EA +L+K M +S TL+ A GD E + K++
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 644 LKLEPRNSSSYV-LISNILAEG 664
+S + L++N+L +G
Sbjct: 600 RSCGFAGDASTIGLVTNMLHDG 621
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 180/407 (44%), Gaps = 20/407 (4%)
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGS 122
+++ D F ++LI + K +A + D++ + DLV Y +++ G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD- 238
Query: 123 CVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE 182
+ A + M+ ++ + V +++ K + + A++ + G+ ++F
Sbjct: 239 -IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD--ALNLFTEMDNKGIRPDVFT 295
Query: 183 -TTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
++L+ G A+ + M + V +++ LI A++ G+ +EA +L+ +MI
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VT 298
R + PD+ T ++ I D L K + MI P++V + L+ + K V
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 299 KARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
+ ++F + + + V Y ++ G+ + A VF +M+ + V PN+ + L+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----S 410
+ + A + Y+ R + N +I K G ++ +F + S
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
+++++ +MI+G+ G +EA L + ++ + +S T +L++A
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/565 (21%), Positives = 234/565 (41%), Gaps = 89/565 (15%)
Query: 97 VFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKL 156
V D ++V + ++I + G + AF + M+ + + P+ + +L+ K
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGE--MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 157 GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGS 214
G L G + A+ +G + +F +T+ D+Y K G + A+ V+ +M S V +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTI-DVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
+ LI +G+ EAF ++ Q++ R + P ++T ++ I + L G +++ MI
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 275 RMGVEPDMVACTALVDLYSK---------FDVTKARKMFERLRNKDAVIYNVMMTGY--- 322
+MG PD+V LVD SK F V KM + + V++N ++ G+
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV----KMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 323 -----------------LKNDLPV---------------EAINVFHEMIKMSVSPNVALF 350
+K D+ EA+ +F M KM + P+ +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-- 408
LI A + + + R++ + + N +IH KC ++ A FN +
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 409 --RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 466
D+V++ +MI GY +DEA +F LL+ ++VTL L+ L +
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK------ 683
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 526
NN + G + M + ++ ++ ++ ++ ++
Sbjct: 684 -------------------NNDMD------GAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 586
+ KLF M+ I P ++++ I+ G V+E IF I + ++P V
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVV 777
Query: 587 HYNCIIDLLSRAGQLTEAYNLVKSM 611
Y +I + G+L EA L + M
Sbjct: 778 AYAILIRGYCKVGRLVEAALLYEHM 802
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 158/381 (41%), Gaps = 20/381 (5%)
Query: 263 LCHGK-----SIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN----KDAV 313
C G+ H ++ G +V+C ++ S + A ++ + + + V
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVV 287
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
+ ++ G+ K A ++F M + + P++ + LI + + +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHI 429
L V + + I Y K G L A +V+ RM S ++V++T +I G G I
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 489
EA ++ + + + VT SL+ + G L + ++ + + ++ + L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 490 ITTYAKCG-KLNMARY---LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
+ +K G L+ R+ + Q + +N+++ + + E LK+F M + I
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 546 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 605
KPD TFT+++ G +EE L +F M + + P + Y +ID + + T
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 606 NLVKSMPSTHSSA--ALCTLL 624
L M SA A+C ++
Sbjct: 587 QLFDLMQRNKISADIAVCNVV 607
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 193/530 (36%), Gaps = 92/530 (17%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C+R + ++ D A + + G L G ++ ++ + D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEI----TNKDLVAYTSIITAYAHSGGSCVYGAFRIA 131
V SS I +Y + G L A V+ + + ++V YT +I G +Y AF +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR--IYEAFGMY 414
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
+ + + P+ VT SL+ K G+L+ G A++ I+ G+ D + L+D K
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP-DVVIYGVLVDGLSK 473
Query: 192 CGGVKMAAAVFGKMNATST--TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
G + A KM S V +N LI + + EA ++FR M + PD+ T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD--- 296
+ L + M +MG+EPD +A L+D + K FD
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 297 -----------------------VTKARKMFERL----RNKDAVIYNVMMTGYL------ 323
+ A K F L D V YN M+ GY
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 324 -----------------------------KNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
KN+ AI +F M + PN + L+
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS---- 410
S DI + + + + + II K G + A +F++
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 411 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
D+V++ +I GY G + EA +L+ + R ++ D + L +ALS+
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL----LQRALSE 819
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 131/605 (21%), Positives = 254/605 (41%), Gaps = 26/605 (4%)
Query: 28 YLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSE 87
++ K+ + LD S + + + GR+ + + + D + +SLI ++
Sbjct: 161 FMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFAN 220
Query: 88 YGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNR 143
G+ +A VF ++ L+ Y I+ + G + + M+ + P+
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG-TPWNKITSLVEKMKSDGIAPDA 279
Query: 144 VTLVSLLHAAAKLGSL-QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 202
T +L+ K GSL QE + GF D++ LLD+Y K K A V
Sbjct: 280 YTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSY-DKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 203 GKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
+M N S ++ ++N LI+AY +G EA EL QM + PD+ T +
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLR----NKDAVIY 315
+ SI M G +P++ A + +Y ++ T+ K+F+ + + D V +
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 375
N ++ + +N + E VF EM + P F LISA S A +++ +L
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 376 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMITGYVHHGHIDE 431
+ N ++ A+ G + + V M + +++ S++ Y + I
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLI 490
L + + +V L +L+ S+ L A + L R F +++ NS++
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF-SPDITTLNSMV 636
Query: 491 TTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
+ Y + + A + M ER T ++N+++ ++ ++ + ++ + IK
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
PD +++ +++ A + + + +IF M R IVP + YN I + EA
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 607 LVKSM 611
+V+ M
Sbjct: 756 VVRYM 760
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 192/480 (40%), Gaps = 80/480 (16%)
Query: 185 LLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
++ M K G V AA +F + + S V S+ LI+A+ ++G+ EA +F++M
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARK 302
P L+T N IL+ + G +MG + + T+LV+ K
Sbjct: 239 CKPTLITY-NVILN------------VFG---KMGTPWNKI--TSLVE-----------K 269
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
M DA YN ++T + L EA VF EM S + +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY------------ 317
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTS 418
N ++ Y K + A V N M S +V++ S
Sbjct: 318 -----------------------NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 478
+I+ Y G +DEA+ L + + + D T +LL + G + + + A
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 479 HGKELSVNNSLITTYAKCGKLNMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVL 534
+ N+ I Y GK +F ++ + +WN +L + +G +EV
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
+F MK P+ TF ++++A S G E+ + ++R M+ + + P YN ++
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAA 533
Query: 595 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD-TEIG--EAIAKQILK--LEPR 649
L+R G ++ ++ M T S Y + EIG ++A+++ +EPR
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 133/343 (38%), Gaps = 45/343 (13%)
Query: 79 SSLIRLYSEYGKLEDA----HRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
++LI YS G E A R+ D DL Y +++ A A G + ++ + M
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG--MWEQSEKVLAEM 550
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+D R PN +T SLLHA A +G I + +E++ G
Sbjct: 551 EDGRCKPNELTYCSLLHAYA-----------NGKEIGLMHSLAEEVY-----------SG 588
Query: 195 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 254
V AV K T V S L+ EA F ++ R PD+ TL + +
Sbjct: 589 VIEPRAVLLK---TLVLVCSKCDLLP---------EAERAFSELKERGFSPDITTLNSMV 636
Query: 255 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNK--- 310
+ + YM G P M +L+ ++S+ D K+ ++ + K
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 311 -DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 369
D + YN ++ Y +N +A +F EM + P+V + I + + A +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 370 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 412
Y+++H N I+ Y K A+L +R+ D
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/564 (21%), Positives = 244/564 (43%), Gaps = 26/564 (4%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTL 185
A + M R +P+ V LL A AK+ I GV ++ +
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD--LVISFGEKMEILGVSHNLYTYNIM 106
Query: 186 LDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
++ + + A A+ GKM ++ + N L+ + H + EA L QM+
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARK 302
PD +T + + + ++ M+ G +PD+V A+++ L + + A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 303 MFERLRN----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+ ++ D VIY+ ++ K +A+N+F EM + P+V + +LIS +
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLV 414
+ A + +L + V N +I +AK G L A +F+ M R ++V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG-CLSAVKEVHCL 473
++ S+I G+ H +DEA +F L+ ++ D VT +L+ + + ++ +
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGN 529
+ R G ++ +LI + + + A+ +F+QM + ++N +L +G
Sbjct: 407 SRRGLVGNTVTYT-TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
+ + +F +++ ++PD T+ + +G VE+G +F S+ + + P + YN
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYN 524
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKL 646
+I + G EAY L M S TL+ A GD + K++
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 647 E-PRNSSSYVLISNILAEGGRWDE 669
++S+Y L++++L + GR D+
Sbjct: 585 RFAGDASTYGLVTDMLHD-GRLDK 607
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 193/461 (41%), Gaps = 24/461 (5%)
Query: 230 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
EA +LF +M+ + P ++ + + + A++ S M +GV ++ ++
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 290 DLYSK-----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 344
+ + F + KM + V N ++ G+ + EA+ + +M++M
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 345 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 404
P+ F L+ + A ++ ++ + +I+ K G A +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 405 FNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
N+M D+V ++++I + H+D+A+ LF + + +R D T SL+ L
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL----TS 516
G S + + NSLI +AK GKL A LF +M +R + +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 576
+N+++ + MH E ++F M + PD +T+ +++ + V +G+++FR M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 577 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC---TLLSACRLYGDT 633
R +V V Y +I +A A + K M S + TLL G
Sbjct: 408 RR-GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 634 EIGEAIAK--QILKLEPRNSSSYVLISNILAEGGR----WD 668
E + + Q K+EP + +Y ++S + + G+ WD
Sbjct: 467 EKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVEDGWD 506
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 152/360 (42%), Gaps = 55/360 (15%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C+ RH + L + ++ N D + + GR R+ D ++ +N +
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYG----A 127
+SLI +++ GKL +A ++FDE+ + ++V Y S+I + C++ A
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF------CMHDRLDEA 364
Query: 128 FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLD 187
+I + M + P+ VT +L++ K + +G + RRG V + + TTL+
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL-VGNTVTYTTLIH 423
Query: 188 MYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
+ + A VF +M + + ++N L+ NG+ +A +F + K+ P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 246 DLLT---LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARK 302
D+ T ++ + +++ G + + GV+PD++A
Sbjct: 484 DIYTYNIMSEGMCKAGKVE---DGWDLFCSLSLKGVKPDVIA------------------ 522
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
YN M++G+ K L EA +F +M + P+ + LI A LRD
Sbjct: 523 ------------YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA--HLRD 568
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 178/407 (43%), Gaps = 20/407 (4%)
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGS 122
+++ D ++L+ ++ K +A + + + K DLV Y ++I G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 123 CVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE 182
+ A + + M+ ++ + V +++ + K + + A++ + G+ ++F
Sbjct: 222 DL--ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD--ALNLFTEMDNKGIRPDVFT 277
Query: 183 -TTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
++L+ G A+ + M + V ++N LI A+ G+ +EA +LF +MI
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVT 298
R + P+++T + I D L + I M+ PD+V L++ + K V
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 299 KARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
++F + + + V Y ++ G+ + A VF +M+ V PN+ + L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR--- 411
+ + A + Y+ + + + N + K G ++ +F + +
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 412 -DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
D++++ +MI+G+ G +EA LF ++ + DS T +L++A
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 128/547 (23%), Positives = 241/547 (44%), Gaps = 31/547 (5%)
Query: 90 KLEDAHRVFDEITN----KDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVT 145
KL+DA +F E+ +V + +++A A + + MQ+ R+ + +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL--VISLGERMQNLRISYDLYS 117
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV---- 201
L++ + L A+ G ++ G+ D + ++LL+ Y C G +++ AV
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEP-DIVTLSSLLNGY--CHGKRISEAVALVD 174
Query: 202 -FGKMNATSTTVGSWNPLI-AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
M TV ++N LI +LHN +A EA L +M+ R PDL T + +
Sbjct: 175 QMFVMEYQPNTV-TFNTLIHGLFLHN-KASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK----DAVI 314
+ S+ M + +E D+V T ++D + +V A +F + NK + V
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
YN ++ +A + +MI+ ++PNV F LI A + A ++ ++
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD----LVSWTSMITGYVHHGHID 430
+ + + +I+ + L A+ +F M S+D +V++ ++I G+ ++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 490
E + LFR + + L ++VT +L+Q L Q G +++ ++ + L+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 491 TTYAKCGKLNMA----RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
K GKL A YL + E + ++N M+ G + LF + L +K
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
P+ + +T++++ GL EE +FR M +E +P YN +I R G +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREM-KEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 607 LVKSMPS 613
L+K M S
Sbjct: 592 LIKEMRS 598
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/512 (19%), Positives = 205/512 (40%), Gaps = 87/512 (16%)
Query: 105 DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
D+V +S++ Y H G + A + M PN VT +L+H E A
Sbjct: 149 DIVTLSSLLNGYCH--GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 165 IHGYAIRRGF------------GVC----------------------DEIFETTLLDMYH 190
+ + RG G+C D + TT++D
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 191 KCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
V A +F +M+ V ++N LI + G+ +A L MI RK+ P+++
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERL 307
T + I + + L + ++ MI+ ++PD+ ++L++ + D + +A+ MFE +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 308 RNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
+KD V YN ++ G+ K E + +F EM + + N +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY------------- 433
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSM 419
N +I + G A+ +F +M S D+++++ +
Sbjct: 434 ----------------------NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 420 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 479
+ G +G +++A+++F LQ+ + D T +++ + + G + ++ C
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLK 535
+ + ++I+ + + G A LF++M E ++N ++ A G+ A +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEE 567
L M+ D T + ++ H G +E+
Sbjct: 592 LIKEMRSCGFVGDASTISMVINML-HDGRLEK 622
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 166/429 (38%), Gaps = 79/429 (18%)
Query: 14 ASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNS 73
A C ++ + L + ++ N + ++ GR R+ D I+ +N
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFR 129
+ S+LI + + GKL +A +++DE+ + D+ Y+S+I G C++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN------GFCMHDRLD 377
Query: 130 IASTMQD----QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
A M + + +PN VT +L+ K ++EG + +RG V + + TL
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTL 436
Query: 186 LDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
+ + G MA +F KM + + +++ L+ G+ +A +F + K+
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKM 303
PD+ T I + + G + + GV+P++
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV--------------------- 535
Query: 304 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
+IY M++G+ + L EA +F EM + PN + LI A LRD
Sbjct: 536 ---------IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA--RLRDG 584
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 423
A S ++I CG++ A S SM+
Sbjct: 585 DKAASA-----------------ELIKEMRSCGFVGDA-------------STISMVINM 614
Query: 424 VHHGHIDEA 432
+H G ++++
Sbjct: 615 LHDGRLEKS 623
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 213/515 (41%), Gaps = 72/515 (13%)
Query: 89 GKLEDAHRVFDEITN---KDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVT 145
GK+++A +VF+E+ +L Y +I +G + AF + +MQ L+PN T
Sbjct: 357 GKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK--LDTAFELRDSMQKAGLFPNVRT 414
Query: 146 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC--DEIFETTLLDMYHKCGGVKMAAAVFG 203
+ ++ K L E A+ + VC DEI +L+D K G V A V+
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFE---EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 204 KMNATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 261
KM + S + LI + ++G+ + ++++ MI++ PDL L N + C
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL-QLLNTYMDC---- 526
Query: 262 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNK----DAVIYNV 317
M + G EP+ K R MFE ++ + DA Y++
Sbjct: 527 -----------MFKAG-EPE-----------------KGRAMFEEIKARRFVPDARSYSI 557
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
++ G +K E +F+ M + + + +I + A + +
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 378 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAI 433
+ V +I AK L A ++F +S+ ++V ++S+I G+ G IDEA
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQ-------LGCLSAVKEVHCLTYRAFHGKELSVN 486
++ L ++ L + T SLL AL + L C ++KE+ C + +G
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG------ 731
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKL 542
LI K K N A +Q+M ++ + S+ M+ A GN AE LF+ K
Sbjct: 732 -ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
PD + +++ S+ + +F R
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/585 (20%), Positives = 240/585 (41%), Gaps = 69/585 (11%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
++LIR +++ G+++ A + DE+ + D+V Y I ++ G V A++ +
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK--VDMAWKFFHEI 264
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEG--------------------RAIHGYAIRRGF 174
+ L P+ VT S++ K L E I GY F
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 175 GVCDEIFE--------------TTLLDMYHKCGGVKMAAAVFGKMNA-TSTTVGSWNPLI 219
+ E +L K G V A VF +M + + ++N LI
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILI 384
Query: 220 AAYLHNGQALEAFELFRQMIHRKVLPDLLT---LANAILSCAELDYLCHGKSIHGYMIRM 276
G+ AFEL M + P++ T + + + +LD C Y +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-- 442
Query: 277 GVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD----AVIYNVMMTGYLKNDLPVEA 331
PD + +L+D K V A K++E++ + D +++Y ++ + + +
Sbjct: 443 -CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 332 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
++ +MI + SP++ L + + + R++ + +++ + +IH
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 392 YAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 447
K G+ +F M+ + D ++ +I G+ G +++A L ++ +
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 448 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMAR 503
VT S++ L+++ L E + L A K + +N +SLI + K G+++ A
Sbjct: 622 VVTYGSVIDGLAKIDRLD---EAYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 504 YLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
+ +++ ++ LT +WN++L A E L F MK P+++T+ ++
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 604
+ ++ M ++ + P + Y +I L++AG + EA
Sbjct: 738 CKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNIAEA 781
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 187/452 (41%), Gaps = 29/452 (6%)
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
TTL+ + K G V A ++ +M ++S + +N I ++ G+ A++ F ++
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 241 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS---KFDV 297
+ PD +T + I + + L + ++ + P A ++ Y KFD
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD- 325
Query: 298 TKARKMFERLRNKDAV----IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
+A + ER R K ++ YN ++T K EA+ VF EM K +PN++ + L
Sbjct: 326 -EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNIL 383
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-- 411
I + + A + + + V N ++ K L A +F M +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 412 --DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
D +++ S+I G G +D+A ++ + + R +S+ SL++ G KE
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG----RKE 499
Query: 470 VHCLTYRAFHGKELSVNNSLITTYAKC----GKLNMARYLFQQMTERCLT----SWNAML 521
Y+ + S + L+ TY C G+ R +F+++ R S++ ++
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 522 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 581
G E +LF MK D + ++ G V + Q+ M +
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGF 618
Query: 582 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 613
P V Y +ID L++ +L EAY L + S
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 140/389 (35%), Gaps = 74/389 (19%)
Query: 231 AFELFRQMIHRKVLPDLLTLANAIL----SCAELDYLCHGKSIHGYMIRMGVEPDMVACT 286
A E FR R LP N++L C D L I G M G P + C
Sbjct: 81 AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL---DQILGEMSVAGFGPSVNTCI 137
Query: 287 ALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 346
+V KA K+ E GY +V M K P
Sbjct: 138 EMV-----LGCVKANKLRE---------------GY----------DVVQMMRKFKFRPA 167
Query: 347 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 406
+ + LI A S + + ++ + Y V + +I +AK G + A + +
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 407 RMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 462
M+S D+V + I + G +D A F ++ L+ D VT S++ L +
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 463 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 522
L E+ + L N + TYA +N M+
Sbjct: 288 RLDEAVEMF---------EHLEKNRRVPCTYA----------------------YNTMIM 316
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
Y G + E L + P + + ILT G V+E L++F M ++
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AA 374
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
P YN +ID+L RAG+L A+ L SM
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 182/441 (41%), Gaps = 57/441 (12%)
Query: 43 ITLC--LKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDE 100
IT C + +GR++ +V+ + + ++ V +SLI+ + +G+ ED H+++ +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 101 ITNKDLVAYTSIITAYAHSGGSCVYGAFR------IASTMQDQRLYPNRVTLVSLLHAAA 154
+ N++ ++ Y C++ A + ++ +R P+ + L+H
Sbjct: 508 MINQNCSPDLQLLNTYM----DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 155 KLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 214
K G E + Y+++ V D ++D + KCG V
Sbjct: 564 KAGFANETYELF-YSMKEQGCVLDTRAYNIVIDGFCKCGKVN------------------ 604
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 274
+A++L +M + P ++T + I A++D L +
Sbjct: 605 ---------------KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 275 RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPV 329
+E ++V ++L+D + K + +A + E L K + +N ++ +K +
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA-NQI 388
EA+ F M ++ +PN + LI+ + +R A + ++ Q + I+ +
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA-FVFWQEMQKQGMKPSTISYTTM 768
Query: 389 IHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
I AK G + A +F+R ++ D + +MI G + +A LF +R L
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 445 RIDSVTLISLLQALSQLGCLS 465
I + T + LL L + CL
Sbjct: 829 PIHNKTCVVLLDTLHKNDCLE 849
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/493 (19%), Positives = 198/493 (40%), Gaps = 51/493 (10%)
Query: 168 YAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHN 225
Y R C E + + LL M +C + G+M+ +V + ++ +
Sbjct: 88 YERRTELPHCPESYNSLLLVM-ARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKA 146
Query: 226 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 285
+ E +++ + M K P I + + +++ ++ M +G EP +
Sbjct: 147 NKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLF 206
Query: 286 TALVDLYSKFD-VTKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
T L+ ++K V A + + ++ + D V+YNV + + K A FHE+
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
+ P+ + ++I + + A + ++ +++ + N +I Y G
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 401 ARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRE--------NLRIDS 448
A + R R++ ++++ ++T G +DEA+ +F ++++ N+ ID
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDM 386
Query: 449 V-------TLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS----------------- 484
+ T L ++ + G V+ V+ + R ++L
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 485 --VNNSLITTYAKCGKLNMARYLFQQMTER-CLTS---WNAMLGAYAMHGNYAEVLKLFN 538
SLI K G+++ A ++++M + C T+ + +++ + HG + K++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 539 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
M N PD + + +G E+G +F I+ VP Y+ +I L +A
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE-IKARRFVPDARSYSILIHGLIKA 565
Query: 599 GQLTEAYNLVKSM 611
G E Y L SM
Sbjct: 566 GFANETYELFYSM 578
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 148/671 (22%), Positives = 278/671 (41%), Gaps = 49/671 (7%)
Query: 25 LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRL 84
L + +K + + A L S GR K++ + L D + +++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 85 YSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
YS+ G++++A ++ E+ D++ S+I + V A+++ M++ +L
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA--DRVDEAWKMFMRMKEMKLK 570
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P VT +LL K G +QE + +++G + I TL D K V +A
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP-NTITFNTLFDCLCKNDEVTLALK 629
Query: 201 VFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+ KM V ++N +I + NGQ EA F QM + V PD +TL +
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVV 688
Query: 259 ELDYLCHG-KSIHGYMIRMGVEPDMVACTALV-DLYSKFDVTKARKMFERL------RNK 310
+ + K I ++ +P + L+ + ++ + A ERL R+
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSI 369
D+++ ++ N++ A +F + K + V P + + LI + + I +A+ +
Sbjct: 749 DSILVPIIRYSCKHNNVS-GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 370 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD----LVSWTSMITGYVH 425
V I V N ++ Y K G + ++ M + + ++ +I+G V
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 426 HGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG---- 480
G++D+A+ L+ L+ + + T L+ LS+ G L K++ F G
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL-------FEGMLDY 920
Query: 481 ---KELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEV 533
++ N LI + K G+ + A LF++M + L +++ ++ M G E
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 534 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 593
L F +K + PD + + I+ S +EE L +F M I P YN +I
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 594 LLSRAGQLTEA---YNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK--LEP 648
L AG + EA YN ++ + L+ L G E A+ + ++ P
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 649 RNSSSYVLISN 659
N+ +Y + N
Sbjct: 1101 -NTGTYEQLPN 1110
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 147/660 (22%), Positives = 278/660 (42%), Gaps = 77/660 (11%)
Query: 80 SLIRLYSEYGKLEDAHRVFDEITN----KDLVAYTSIITAYAHSGGSCVYG-AFRIASTM 134
+L+ +S+ L+ + + E+ D+V +T ++ A +G +G AF M
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN---FGEAFDTLDVM 389
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCG 193
+DQ + PN T +L+ ++ L + A+ + GV + +D Y K G
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDD--ALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 194 GVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
A F KM + + + N + + G+ EA ++F + ++PD +T
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY- 506
Query: 252 NAILSC-AELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLR- 308
N ++ C +++ + + M+ G EPD++ +L++ LY V +A KMF R++
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 309 ---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
V YN ++ G KN EAI +F M++ PN F L + ++ L
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS---RDLVSWTSMITG 422
A + ++ + V N II K G ++ A F++M+ D V+ +++ G
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 686
Query: 423 YVHHGHIDEAI-ILFRLL-----QRENLRIDSVTLISLLQALSQLGCLSAVKE------- 469
V I++A I+ L Q NL + + + L++ G +AV
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDL----IGSILAEAGIDNAVSFSERLVAN 742
Query: 470 ----------VHCLTYRAFHG-------------KELSVN------NSLITTYAKCGKLN 500
V + Y H K+L V N LI + +
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 501 MARYLFQQM-TERCL---TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
+A+ +F Q+ + C+ ++N +L AY G E+ +L+ M + + +T ++
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM---PS 613
+ +G V++ L ++ ++ + P Y +ID LS++G+L EA L + M
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 614 THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS-SSYVLISNILAEGGRWDEVAH 672
+ A L++ G+ + A+ K+++K R +Y ++ + L GR DE H
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 123/569 (21%), Positives = 221/569 (38%), Gaps = 100/569 (17%)
Query: 58 FGKRVHVDSI--------KLNLNSDCFVGSSLIRLYSEYGKLEDAHRVF----DEITNKD 105
GKR +DS+ L L + + + IR+ GK+ +A+ + DE D
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 106 LVAYTSIITAYAHSGG-SCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
+V YT +I A + C F M+ R P+RVT ++LL + L +
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFE---KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 224
+ G V D + T L+D K G FG
Sbjct: 350 FWSEMEKDGH-VPDVVTFTILVDALCKAGN-------FG--------------------- 380
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
EAF+ M + +LP+L T I + L + G M +GV+P
Sbjct: 381 -----EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 285 CTALVDLYSKF-DVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
+D Y K D A + FE+++ K + V N + K EA +F+ +
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 340 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 399
+ + P+ + ++ S + +I A + ++ + V + N +I+T K +
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 400 YARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 455
A +F RM+ L V++ +++ G +G I EAI LF
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF------------------- 596
Query: 456 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA-RYLFQQMTERCL 514
+ + Q GC + +T+ N+L K ++ +A + LF+ M C+
Sbjct: 597 EGMVQKGC-----PPNTITF-----------NTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 515 T---SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
++N ++ +G E + F+ MK + PD +T ++L + L+E+ +I
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 572 FRSMIREYTIVPGEVHYNCII-DLLSRAG 599
+ + P + + +I +L+ AG
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAG 728
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 139/357 (38%), Gaps = 50/357 (14%)
Query: 301 RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL 360
RKM E +A YN ++ LK+ EA+ V+ MI P++ + +L+ +
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 361 RDIRLARSIHGYVLRHQYI---TRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DL 413
RDI S+ G + + + V I + G + A + RM D+
Sbjct: 237 RDID---SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE---- 469
V++T +I +D A +F ++ + D VT I+LL S L +VK+
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 470 ----------------VHCLTYRAFHGK---------------ELSVNNSLITTYAKCGK 498
V L G+ L N+LI + +
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 499 LNMARYLFQQM----TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 554
L+ A LF M + ++ + Y G+ L+ F MK I P+ + +
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 555 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
L + + +G E QIF + ++ +VP V YN ++ S+ G++ EA L+ M
Sbjct: 474 SLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 225/520 (43%), Gaps = 82/520 (15%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGS----LQEGRAIHGYAIRRGFGVCDEIFE 182
A + S M R +P+ V LL A KL + G+ + IR D
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-----DLYTF 123
Query: 183 TTLLDMYHKCGGVKMAAAVFGKM-----NATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 237
+++ + C V +A ++ GKM T+GS L+ + + +A L +
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS---LVNGFCRRNRVSDAVSLVDK 180
Query: 238 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY------MIRMGVEPDMVACTALVD- 290
M+ PD++ NAI+ D LC K ++ + R G+ P++V TALV+
Sbjct: 181 MVEIGYKPDIVAY-NAII-----DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 291 -LYSKFDVTKARKMFERLRNK---DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 346
S AR + + ++ K + + Y+ ++ ++KN +EA +F EM++MS+ P+
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 347 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 406
+ + +LI+ + +H R++ ANQ+ G L
Sbjct: 295 IVTYSSLINGL----------CLH---------DRIDEANQMFDLMVSKGCLA------- 328
Query: 407 RMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 466
D+VS+ ++I G+ +++ + LFR + + L ++VT +L+Q Q G +
Sbjct: 329 -----DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 467 VKEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMTER----CLTSWNAM 520
+E + F G ++ N L+ G+L A +F+ M +R + ++ +
Sbjct: 384 AQEF--FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 521 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 580
+ G E LF + L +KPD +T+T++++ GL+ E ++ M +E
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE-- 499
Query: 581 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
G + +C + G +T + L+K M S + +L
Sbjct: 500 ---GLMKNDCTLS----DGDITLSAELIKKMLSCGYAPSL 532
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 141/326 (43%), Gaps = 46/326 (14%)
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD----IRLARSIHGYVLRHQYIT----- 380
+AI++F +M+K P++ F L+SA+ L+ I L + + +R+ T
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 381 -------RVEIANQIIHTYAKCGYLQYARLVFNRM------RSR---------------- 411
+V +A I+ K GY + R+ + R+R
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGY-EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 412 --DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
D+V++ ++I +++A F+ ++R+ +R + VT +L+ L S
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 470 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT----ERCLTSWNAMLGAYA 525
+ + + ++L+ + K GK+ A+ LF++M + + ++++++
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 526 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 585
+H E ++F+ M D +++ +++ + VE+G+++FR M + +V
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNT 365
Query: 586 VHYNCIIDLLSRAGQLTEAYNLVKSM 611
V YN +I +AG + +A M
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 135/297 (45%), Gaps = 30/297 (10%)
Query: 61 RVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAY 116
R+ D IK + + S+L+ + + GK+ +A +F+E+ + D+V Y+S+I
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN-- 303
Query: 117 AHSGGSCVYGAFRIASTMQD----QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR 172
G C++ A+ M D + + V+ +L++ K +++G + +R
Sbjct: 304 ----GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 173 GFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALE 230
G V + + TL+ + + G V A F +M+ S + ++N L+ NG+ +
Sbjct: 360 GL-VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 231 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 290
A +F M R++ D++T I + + S+ + G++PD+V T ++
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 291 -LYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKND--LPVEAINVFHEMIKMSVS 344
L +K + + ++ +++ + G +KND L I + E+IK +S
Sbjct: 479 GLCTKGLLHEVEALYTKMKQE----------GLMKNDCTLSDGDITLSAELIKKMLS 525
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/574 (22%), Positives = 246/574 (42%), Gaps = 58/574 (10%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIAST----M 134
++LI LY + G+L DA +F E+ + T H+ G+ +G A + M
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGT--HGHLSEAESLLKKM 366
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV-CDEIFETTLLDMYHKCG 193
+++ + P+ T LL A G ++ A+ Y R G+ D + +L + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEA--ALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 194 GVKMAAAVFGKMNATSTTVGSWN-PLIAA-YLHNGQALEAFELFRQMIHRKVLPDLLTLA 251
V AV +M+ S + + P+I Y++ G ++A LF + VL TLA
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLA 483
Query: 252 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKD 311
I AE +++ Y K +++ R D
Sbjct: 484 AVIDVYAEKGLWVEAETV---------------------FYGKRNMSGQRN--------D 514
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
+ YNVM+ Y K L +A+++F M P+ + +L ++ + + A+ I
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHG 427
+L + +I +Y + G L A ++ M + V + S+I G+ G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 487
++EAI FR+++ ++ + + L SL++A S++GCL + V+ + G +++ +N
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 488 SLITTYAKCGKLNMARYLFQQMTER--C-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 544
S+++ A G ++ A +F + E+ C + S+ M+ Y G E +++ M+
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESG 754
Query: 545 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG----- 599
+ D +F ++ + G + E ++F M+ E ++ + + LL + G
Sbjct: 755 LLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Query: 600 --QLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 631
QL AYN K + + A TL SA LY
Sbjct: 815 VSQLQTAYNEAKPLA---TPAITATLFSAMGLYA 845
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 130/627 (20%), Positives = 246/627 (39%), Gaps = 91/627 (14%)
Query: 54 GRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAY 109
GRL + + +K + D +++I +G L +A + ++ K D Y
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTY 378
Query: 110 TSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYA 169
+++ +A +G + A ++ L+P+ VT ++LH + + E A+
Sbjct: 379 NILLSLHADAGD--IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM 436
Query: 170 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA----TSTTV----------GSW 215
R + DE ++ MY G V A A+F + +STT+ G W
Sbjct: 437 DRNSIRI-DEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW 495
Query: 216 -----------------------NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
N +I AY +A LF+ M ++ PD T +
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRN-- 309
A +D + + I M+ G +P A++ Y + + + A ++E +
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 310 --KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
+ V+Y ++ G+ ++ + EAI F M + V N + +LI A S + + AR
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR---DLVSWTSMITGYV 424
++ + + V +N ++ A G + A +FN +R + D++S+ +M+ Y
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYK 735
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH---------CLTY 475
G +DEAI + ++ L D + ++ + G LS E+ L +
Sbjct: 736 GMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDW 795
Query: 476 RAFH---------GKELSVNNSLITTYAKCGKLN---MARYLFQQMT------ERC--LT 515
F G + L T Y + L + LF M E C LT
Sbjct: 796 GTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELT 855
Query: 516 S---------WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 566
S +NA++ Y+ G+ LK + M+ ++PD +T ++ +G+V
Sbjct: 856 SGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMV- 914
Query: 567 EGLQIFRSMIREYTIVPGEVHYNCIID 593
EG++ S + + P + + + D
Sbjct: 915 EGVKRVHSRLTFGELEPSQSLFKAVRD 941
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 11/235 (4%)
Query: 23 EVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLI 82
E R ++ +S C + S V LG L ++ K + + V SLI
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 83 RLYSEYGKLEDAHRVF----DEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
++E G +E+A + F + + + TS+I AY+ G C+ A R+ M+D
Sbjct: 628 NGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG--CLEEARRVYDKMKDSE 685
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
P+ S+L A LG + E +I + R G CD I T++ +Y G + A
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESI--FNALREKGTCDVISFATMMYLYKGMGMLDEA 743
Query: 199 AAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTL 250
V +M + + S+N ++A Y +GQ E ELF +M + RK+L D T
Sbjct: 744 IEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTF 798
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 29/252 (11%)
Query: 388 IIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFR--LLQR 441
++ Y K G ++ A L M R D V+ +++ + + G D A F+ +
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 442 ENLRIDSV----------TLISLLQALS----QLGCLSAV-KEVHCLTYRAFHGKE---L 483
+L +DS+ + ++L Q LS ++G + + K +H + ++
Sbjct: 246 VDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLT 305
Query: 484 SVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNH 539
S N+LI Y K G+LN A LF +M + + ++N M+ HG+ +E L
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 540 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
M+ I PD T+ +L+ + +G +E L+ +R IR+ + P V + ++ +L +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRK-IRKVGLFPDTVTHRAVLHILCQRK 424
Query: 600 QLTEAYNLVKSM 611
+ E ++ M
Sbjct: 425 MVAEVEAVIAEM 436
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 196/428 (45%), Gaps = 25/428 (5%)
Query: 215 WNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
++ LI Y+ + + L+ +F+ MI + +LP++ TL+ + + + + M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 274 IRMGVEPDMVACTALV-DLYSKFDVTKARKMFERLR----NKDAVIYNVMMTGYLKNDLP 328
+ +G+ PD+ T ++ L D+++A++M + + + V YNV++ G K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 329 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQI 388
EA+ + ++ + P+V + L+ + +++ + + +L ++ + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 389 IHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
+ K G ++ A + R+ S +L + ++I EA +LF + + L
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NSLITTYAKCGKLNMA 502
R + VT L+ + G L + L G +LSV NSLI + K G ++ A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTA--LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 503 RYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 558
+M E + ++ +++G Y G + L+L++ M I P TFT++L+
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 559 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------P 612
+GL+ + +++F M E+ + P V YN +I+ G +++A+ +K M P
Sbjct: 517 LFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 613 STHSSAAL 620
T+S L
Sbjct: 576 DTYSYRPL 583
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 137/640 (21%), Positives = 258/640 (40%), Gaps = 78/640 (12%)
Query: 65 DSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFD--EITNKD--LVAYTSIITAYAHSG 120
D + + + D ++ + +IR E L A + E T D +V Y +I
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 121 GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI 180
V+ A I + + L P+ VT +L++ K+ + G + + F E
Sbjct: 277 K--VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP-SEA 333
Query: 181 FETTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
++L++ K G ++ A + ++ S + +N LI + + EA LF +M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DV 297
+ P+ +T + I L S G M+ G++ + +L++ + KF D+
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 298 TKARKMFERLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
+ A + NK V Y +M GY +A+ ++HEM ++P++ F L
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
+S + + G ++ A +FN M ++
Sbjct: 514 LSGL-----------------------------------FRAGLIRDAVKLFNEMAEWNV 538
Query: 414 ----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
V++ MI GY G + +A + + + + D+ + L+ L G S K
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK- 597
Query: 470 VHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAML 521
+ H +N L+ + + GKL A + Q+M +R L + ++
Sbjct: 598 ---VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 522 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 581
H + L M +KPD++ +TS++ A S +G +E I+ MI E
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GC 713
Query: 582 VPGEVHYNCIIDLLSRAGQLTEAYNL------VKSMPSTHSSAALCTLLSACRLYGDTEI 635
VP EV Y +I+ L +AG + EA L V S+P+ + +L+ G+ ++
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK----GEVDM 769
Query: 636 GEAIA--KQILKLEPRNSSSYVLISNILAEGGRWDEVAHI 673
+A+ ILK N+++Y ++ GR +E + +
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 115/549 (20%), Positives = 217/549 (39%), Gaps = 89/549 (16%)
Query: 68 KLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL----VAYTSIITAYAHSGGSC 123
K+ L + S LI ++ GKL+ A E+ + L Y S+I + G
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD-- 452
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE- 182
+ A + M +++L P VT SL+ G + +A+ Y G G+ I+
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN--KALRLYHEMTGKGIAPSIYTF 510
Query: 183 TTLLDMYHKCGGVKMAAAVFGKM---NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
TTLL + G ++ A +F +M N V ++N +I Y G +AFE ++M
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV-TYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 240 HRKVLPDLLTLANAILSCA--------------------ELDYLCHGKSIHGYMIRMGVE 279
+ ++PD + I EL+ +C+ +HG+ +E
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 280 PDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 339
+ C ++M +R + D V Y V++ G LK+ + EM
Sbjct: 630 EALSVC---------------QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 340 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 399
+ P+ ++ ++I A S D + A I
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD---------------------------- 706
Query: 400 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 459
L+ N + V++T++I G G ++EA +L +Q + + VT L L+
Sbjct: 707 ---LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 460 QLGCLSAVK--EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-----TER 512
+ G + K E+H + + N LI + + G++ A L +M +
Sbjct: 764 K-GEVDMQKAVELHNAILKGLLANT-ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Query: 513 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 572
C+T + M+ + + ++L+N M I+PD + + +++ C +G + + ++
Sbjct: 822 CIT-YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 573 RSMIREYTI 581
M+R+ I
Sbjct: 881 NEMLRQGLI 889
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 154/411 (37%), Gaps = 14/411 (3%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C + + LR Y ++ + T L G + ++ + + N+ +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
+ +I Y E G + A E+T K +V T H G C+ G A
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH--GLCLTGQASEAKVFV 600
Query: 136 D----QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
D N + LLH + G L+E ++ ++RG + D + L+D K
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL-DLVCYGVLIDGSLK 659
Query: 192 CGGVKMAAAVFGKMNATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
K+ + +M+ + +I A G EAF ++ MI+ +P+ +T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 250 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK--FDVTKARKMFERL 307
I + ++ + + M + P+ V +D+ +K D+ KA ++ +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 308 RN---KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 364
+ YN+++ G+ + EA + MI VSP+ + +I+ + D++
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 365 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 415
A + + N +IH G + A + N M + L+
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/562 (21%), Positives = 241/562 (42%), Gaps = 31/562 (5%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQE----GRAIHGYAIRRGFGVCDEIFE 182
A + M R P+ V LL A AK+ G + I G +
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN---- 124
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
L++ + + + +A A+ GKM ++ + + L+ Y H + +A L QM+
Sbjct: 125 -ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 241 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTK 299
PD +T I + ++ M++ G +P++V +V+ L + D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 300 ARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
A + ++ D VI+N ++ K +A+N+F EM + PNV + +LIS
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR---- 411
+ A + ++ + + N +I + K G A +++ M R
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV- 470
D+ ++ S++ G+ H +D+A +F + ++ D VT +L++ + + E+
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 471 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAM 526
+++R G ++ +LI G + A+ +F+QM + +++ +L
Sbjct: 424 REMSHRGLVGDTVTYT-TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 527 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 586
+G + L++F++M+ IK D +T+++ +G V++G +F S+ + + P V
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVV 541
Query: 587 HYNCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQI 643
YN +I L L EAY L+K M +S TL+ A GD + +++
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Query: 644 LKLEPRNSSSYV-LISNILAEG 664
+S + L++N+L +G
Sbjct: 602 RSCRFVGDASTIGLVANMLHDG 623
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 212/535 (39%), Gaps = 88/535 (16%)
Query: 106 LVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
+V +S++ Y H G + A + M + P+ +T +L+H E A+
Sbjct: 155 IVTLSSLLNGYCH--GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 166 HGYAIRRGFGVCDEIFET--TLLDMYHKCGGVKMAAAVFGKMNAT--STTVGSWNPLIAA 221
++RG C T +++ K G +A + KM A V +N +I +
Sbjct: 213 VDRMVQRG---CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 222 YLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
+A LF++M + + P+++T + +++SC LC G D
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYS-SLISC-----LCS----------YGRWSD 313
Query: 282 MVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
A L D M E+ N + V +N ++ ++K VEA ++ +MIK
Sbjct: 314 --ASQLLSD------------MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
S+ P++ + +L++ + A+ + +++ V N +I + K ++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 402 RLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
+F M R D V++T++I G H G D A +F+ + + + D +T LL
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 458 LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSW 517
L G L EV ++ ++ + ++I K GK++ W
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD--------------DGW 525
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
+ LF + L +KP+ +T+ ++++ L++E + + M +
Sbjct: 526 D-----------------LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM-K 567
Query: 578 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 632
E +P YN +I R G + L++ M S CR GD
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS-------------CRFVGD 609
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/495 (19%), Positives = 202/495 (40%), Gaps = 55/495 (11%)
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
A S+ G + ++ LH+ + +A LF M+ + LP ++ + + A++
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLY---SKFDVTKA--RKMFERLRNKDAVIYNVMMTG 321
S+ M R+ + + L++ + S+ + A KM + V + ++ G
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
Y +A+ + +M++M P+ F LI HG L ++
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLI---------------HGLFLHNKASEA 209
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
V + ++++ R +LV++ ++ G G D A+ L ++
Sbjct: 210 VALVDRMVQ----------------RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 442 ENLRIDSVTLISLLQALSQL----GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 497
+ D V +++ +L + L+ KE+ R + +SLI+ G
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP----NVVTYSSLISCLCSYG 309
Query: 498 KLNMARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
+ + A L M E+ L ++NA++ A+ G + E KL++ M +I PD T+
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 554 SILTA-CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 612
S++ C H L ++ Q+F M+ + P V YN +I ++ ++ + L + M
Sbjct: 370 SLVNGFCMHDRL-DKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 613 S---THSSAALCTLLSACRLYGDTEIGEAIAKQILKLE-PRNSSSYVLISNILAEGGRWD 668
+ TL+ GD + + + KQ++ P + +Y ++ + L G+ +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 669 EVAHIRAMTKDKELK 683
+ + + E+K
Sbjct: 488 KALEVFDYMQKSEIK 502
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 144/338 (42%), Gaps = 22/338 (6%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C+ RH + L + +++ + + + + GR ++ D I+ +N +
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIA 131
++LI + + GK +A +++D++ + D+ Y S++ + C++ A
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF------CMHDRLDKA 384
Query: 132 STMQD----QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLD 187
M + + +P+ VT +L+ K +++G + RG V D + TTL+
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQ 443
Query: 188 MYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
G A VF +M + + +++ L+ +NG+ +A E+F M ++
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMF 304
D+ I + + G + + GV+P++V ++ L SK + +A +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 305 ERLRNKDAV----IYNVMMTGYLKNDLPVEAINVFHEM 338
++++ + YN ++ +L++ + + EM
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 6/261 (2%)
Query: 393 AKCGYLQYARLVFNRMRSRDLVSWTSMI----TGYVHHGHIDEAIILFRLLQRENLRIDS 448
AK L R + N + + L +T ++ + HG + +A+ +L N +D
Sbjct: 195 AKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDL 254
Query: 449 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 508
L+ L + + L K VH + +LS N+ L+ Y+ CG N A +F++
Sbjct: 255 SRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEK 314
Query: 509 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL-GNIKPDELTFTSILTACSHSGLVEE 567
M+E+ L +W ++ +A +G + + +F+ K GNI PD F I AC G V+E
Sbjct: 315 MSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLGDVDE 373
Query: 568 GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSAC 627
GL F SM R+Y I P Y ++++ + G L EA V+ MP + TL++
Sbjct: 374 GLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLS 433
Query: 628 RLYGDTEIGEAIAKQILKLEP 648
R++G+ E+G+ A+ + L+P
Sbjct: 434 RVHGNLELGDYCAEVVEFLDP 454
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 112/257 (43%), Gaps = 33/257 (12%)
Query: 314 IYNVMMTGYLK--NDLPVEAINVF--HEMIK-----------MSVSPNVALFLNLISAVS 358
+ N + YLK D+ +E + F H +K M+ +++ L L
Sbjct: 206 LVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICG 265
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFNRMRSRDLVSW 416
+ ++ A+++HG + ++ +++++ ++ Y+ CG A VF +M ++L +W
Sbjct: 266 EAEGLQEAKTVHGKI--SASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 417 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE--VHCLT 474
+I + +G ++AI +F + E D + A LG V E +H +
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLG---DVDEGLLHFES 380
Query: 475 YRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNY- 530
+G S+ + SL+ YA G L+ A ++M E + W ++ +HGN
Sbjct: 381 MSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLE 440
Query: 531 -----AEVLKLFNHMKL 542
AEV++ + +L
Sbjct: 441 LGDYCAEVVEFLDPTRL 457
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Query: 144 VTLVSLLHAAAKLGS---LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
V L LL A G LQE + +HG I D LL+MY CG AA+
Sbjct: 252 VDLSRLLRLAKICGEAEGLQEAKTVHG-KISASVSHLDLSSNHVLLEMYSNCGLANEAAS 310
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
VF KM + + +W +I + NG +A ++F + +PD +C L
Sbjct: 311 VFEKM--SEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGML 368
Query: 261 DYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYS 293
+ G M R G+ P + +LV++Y+
Sbjct: 369 GDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 223 LHNGQALEAFELFRQMIHRKVLP---DLLTLANAILSCAELD------------------ 261
LH+ Q EA +LF M+ + LP D L N I + D
Sbjct: 48 LHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDL 107
Query: 262 YLCH--------------GKSIHGYMIRMGVEPDMVACTALVDLYSKFD-----VTKARK 302
Y C+ S G M+++G EPD+V T+L++ + + ++ +
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 303 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 362
M E D V+Y ++ KN A+++F +M + P+V ++ +L++ + +
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 363 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTS 418
R A S+ + + + V N +I + K G A ++N M + ++ ++TS
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRA 477
+I G+ G +DEA +F L++ + D V SL+ + + A+K + ++ +
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 478 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEV 533
G ++ +LI + + GK N+A+ +F M R + ++N +L +G +
Sbjct: 348 LTGNTITYT-TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 534 LKLFNHMK---LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC 590
L +F M+ + + P+ T+ +L ++G +E+ L +F M R+ + G + Y
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM-RKREMDIGIITYTI 465
Query: 591 IIDLLSRAGQLTEAYNLVKSMPS 613
II + +AG++ A NL S+PS
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPS 488
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 177/385 (45%), Gaps = 15/385 (3%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ VT SL++ ++E ++ + G D + TT++D K G V A +
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP-DVVMYTTIIDSLCKNGHVNYALS 198
Query: 201 VFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F +M V + L+ ++G+ +A L R M RK+ PD++T I +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS-KFDVTKARKMFERLRNK----DAV 313
+ + ++ MIRM + P++ T+L++ + + V +AR+MF + K D V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
Y ++ G+ K +A+ +F+EM + ++ N + LI + +A+ + ++
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-----WT--SMITGYVHH 426
+ + N ++H G ++ A ++F M+ R++ WT ++ G ++
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 486
G +++A+++F +++ + I +T ++Q + + G + + C +
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 487 NSLITTYAKCGKLNMARYLFQQMTE 511
++I+ + G + A LF++M E
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKE 523
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 174/411 (42%), Gaps = 51/411 (12%)
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 275
N L+ + + Q A +M+ PD++T + I + + S+ M+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 276 MGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN----KDAVIYNVMMTGYLKNDLPVE 330
MG++PD+V T ++D L V A +F+++ N D V+Y ++ G + +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 331 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 390
A ++ M K + P+V F LI A A ++ ++R + +I+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 391 TYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 446
+ G + AR +F M ++ D+V++TS+I G+ +D+A+ +F + ++ L
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 447 DSVTLISLLQALSQLGCLSAVKEV--------------------HCLTYRAFHGKELSVN 486
+++T +L+Q Q+G + +EV HCL Y K L +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 487 NSL-----------ITTY-----AKC--GKLNMARYLFQQMTERCL----TSWNAMLGAY 524
+ I TY C GKL A +F+ M +R + ++ ++
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 525 AMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 575
G + LF + +KP+ +T+T++++ GL E +FR M
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 176/429 (41%), Gaps = 67/429 (15%)
Query: 70 NLNSDCFVGSSLIRLYSEY-GKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAF 128
NL +CF SS L S + GK+ D+V +TS+I + G+ + A
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLG------FEPDIVTFTSLINGFCL--GNRMEEAM 162
Query: 129 RIASTMQDQRLYPNRVTLVSLLHAAAKLG----SLQEGRAIHGYAIRRGFGVCDEIFETT 184
+ + M + + P+ V +++ + K G +L + Y IR D + T+
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP-----DVVMYTS 217
Query: 185 LLDMYHKCGGVKMAAAVFGKMNA--TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
L++ G + A ++ M V ++N LI A++ G+ L+A EL+ +MI
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKAR 301
+ P++ T + I + + + M G PD+VA T+L++ + K V A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 302 KMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
K+F + K + + Y ++ G+ + P A VF M+ V PN+ + L+ +
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 358 SDLRDIRLARSIHGYVLRHQY---ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL- 413
++ A I + + + + N ++H G L+ A +VF MR R++
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 414 --------------------------------------VSWTSMITGYVHHGHIDEAIIL 435
V++T+MI+G G EA +L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 436 FRLLQRENL 444
FR ++ + +
Sbjct: 518 FRKMKEDGV 526
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 142/619 (22%), Positives = 254/619 (41%), Gaps = 79/619 (12%)
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL------VAYTSIITA 115
V+ I ++ D F S ++ Y G ++ A VF + T L V Y S+I
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLING 270
Query: 116 YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQE-------------- 161
YA G V G R+ M ++ + N VT SL+ K G ++E
Sbjct: 271 YAMIGD--VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 162 ------GRAIHGY----AIRRGFGVCDEIFE----------TTLLDMYHKCGGVKMAAAV 201
G + GY IR V D + E +L++ Y K G + A +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 202 FGKMNATSTTVG--SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 259
F +MN S ++N L+ Y G EA +L QM ++V+P ++T + +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 260 LDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK----DAVI 314
+ S+ M++ GV D ++C+ L++ L+ D +A K++E + + D +
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 315 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 374
NVM++G K + EA + + P V + L + +++ A ++ Y+
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITGYVHHGHID 430
R +E+ N +I K +L + +R+R L ++ ++ITG+ + G ID
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 431 EA-IILFRLLQRE---NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL--- 483
+A F ++++ N+ I S SL + L + E CL + +L
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFR-------LDKIDEA-CLLLQKIVDFDLLLP 680
Query: 484 ---SVNNSLITTYAKCGKLNMARYLFQQMTERCL-----TSWNAMLGAYAMHGNYAEVLK 535
S+ L + C K + T + L +N + G + K
Sbjct: 681 GYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARK 740
Query: 536 LFNHMKLGN-IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 594
LF+ + + PDE T+T ++ C+ +G + + + M + I+P V YN +I
Sbjct: 741 LFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALK-GIIPNIVTYNALIKG 799
Query: 595 LSRAGQLTEAYNLVKSMPS 613
L + G + A L+ +P
Sbjct: 800 LCKLGNVDRAQRLLHKLPQ 818
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 131/587 (22%), Positives = 249/587 (42%), Gaps = 89/587 (15%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
+SLI+ Y + G +E+A VF+ + K LVA DQ
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVA---------------------------DQH 332
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 198
+Y L+ + G +++ +H I G I +L++ Y K G + A
Sbjct: 333 MYG------VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC-NSLINGYCKSGQLVEA 385
Query: 199 AAVFGKMNATSTTVG--SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
+F +MN S ++N L+ Y G EA +L QM ++V+P ++T +
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK----D 311
+ + S+ M++ GV D ++C+ L++ L+ D +A K++E + + D
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
+ NVM++G K + EA + + P V + L + +++ A ++
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITGYVHHG 427
Y+ R +E+ N +I K +L + +R+R L ++ ++ITG+ + G
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Query: 428 HIDEA-IILFRLLQR--------------ENLRIDSVTLIS-LLQALSQLGCL----SAV 467
ID+A F ++++ R+D + LLQ + L ++
Sbjct: 626 MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSL 685
Query: 468 KE------VHCLTYRAF-------HGKELSVNNSLITTYA-----KCGKLNMARYLFQQM 509
KE CL + K+L V N+++ A K GKL AR LF +
Sbjct: 686 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 510 --TERCLT---SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
++R + ++ ++ A+ G+ + L + M L I P+ +T+ +++ G
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
V+ ++ + ++ I P + YN +ID L ++G + EA L + M
Sbjct: 806 VDRAQRLLHKLPQK-GITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/539 (22%), Positives = 229/539 (42%), Gaps = 54/539 (10%)
Query: 128 FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAI---RRGFGVCDEI---- 180
F +AS + Q+ P+ ++H ++ + Q+ ++ + GF V E+
Sbjct: 91 FNLAS--KQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVF 148
Query: 181 ----FETTLLDM----YHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALE 230
F T+ DM Y + G VK A VF M ++ S N L++ + G+
Sbjct: 149 KEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFV 208
Query: 231 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-------RMGVEPDMV 283
A ++ QMI +V PD+ T + + + C ++ M+ +G+E ++V
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVV------NAYCRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 284 ACTALVDLYSKFDVTKA-----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 338
+L++ Y+ + R M ER +++ V Y ++ GY K L EA +VF +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 339 IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL 398
+ + + ++ L+ IR A +H ++ T I N +I+ Y K G L
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 399 QYARLVFNRMRSRDLV----SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISL 454
A +F+RM L ++ +++ GY G++DEA+ L + ++ + +T L
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 455 LQALSQLGCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 513
L+ S++G V + + R + E+S ++L+ K G N A L++ + R
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISC-STLLEALFKLGDFNEAMKLWENVLARG 501
Query: 514 L----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGL 569
L + N M+ E ++ +++ + KP T+ ++ G ++E
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 570 QIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------PSTHSSAALCT 622
+ M R+ I P YN +I + L + +LV + P+ + AL T
Sbjct: 562 AVKEYMERK-GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/539 (20%), Positives = 218/539 (40%), Gaps = 59/539 (10%)
Query: 31 LKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGK 90
LK K D + + G++ RVH + I++ + ++ + +SLI Y + G+
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 91 LEDAHRVFDEITNKDLVA----YTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTL 146
L +A ++F + + L Y +++ Y +G V A ++ M + + P +T
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG--YVDEALKLCDQMCQKEVVPTVMTY 439
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
LL +++G+ + ++ ++RG DEI +TLL+ K G A ++ +
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNA-DEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 207 ATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 264
A T + N +I+ + EA E+ + + P + T ++ L
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLK 558
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK----DAVIYNVMM 319
++ YM R G+ P + L+ K+ + K + LR + Y ++
Sbjct: 559 EAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI 618
Query: 320 TGYLKNDLPVEAINVFHEMIKMSVSPNV-------------------ALFLNLI------ 354
TG+ + +A EMI+ ++ NV L L I
Sbjct: 619 TGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Query: 355 -------------SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
SA + L+ ++A S+ + + + N I K G L+ A
Sbjct: 679 LPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDA 738
Query: 402 RLVFNRMRSRDLV-----SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 456
R +F+ + S D ++T +I G G I++A L + + + + VT +L++
Sbjct: 739 RKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIK 798
Query: 457 ALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL 514
L +LG + A + +H L + ++ N+LI K G + A L ++M E+ L
Sbjct: 799 GLCKLGNVDRAQRLLHKLPQKGITPNAITY-NTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 128/563 (22%), Positives = 233/563 (41%), Gaps = 63/563 (11%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSII----TAYAHSGGSCVYGAFRIASTM 134
S++I + G+L DA + + V+ I+ + +++ G + I + +
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV 176
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF-----GVCDEIFETTLLDMY 189
Q ++L +LL + S+ A+ G +R G+ GV EI + +
Sbjct: 177 QARKLREAHEAF-TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 190 HKCGGVKMAAAVFGKMNATST------------TVGSWNPLIAAYLHNGQALEAFELFRQ 237
+ + A GKM T + ++N LI+AY G EAFEL
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 238 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV-DLYSKFD 296
M + P + T I + K + M+R G+ PD +L+ + K D
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 297 VTKARKMFERLRNKDAV----IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
V + K+F +R++D V ++ MM+ + ++ +A+ F+ + + + P+ ++
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 353 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR- 411
LI I +A ++ +L+ V N I+H K L A +FN M R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 412 ---DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK 468
D + T +I G+ G++ A+ LF+ ++ + +R+D VT +LL ++G + K
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 469 EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 528
E+ + KE+ L T S++ ++ A G
Sbjct: 536 EI----WADMVSKEI-----LPTP----------------------ISYSILVNALCSKG 564
Query: 529 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 588
+ AE ++++ M NIKP + S++ SG +G MI E VP + Y
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISY 623
Query: 589 NCIIDLLSRAGQLTEAYNLVKSM 611
N +I R +++A+ LVK M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKM 646
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 211/484 (43%), Gaps = 25/484 (5%)
Query: 182 ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS----WNPLIAAYLHNGQALEAFELFRQ 237
++ LL M + G ++ + +++T + GS ++ LI Y+ + EA E F
Sbjct: 133 QSCLLRMIRRSGVSRLE--IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAF-T 189
Query: 238 MIHRKVLPDLLTLANAIL-SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-F 295
++ K + NA++ S + ++ ++ + R GV ++ +V+ K
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 296 DVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
+ K +++ K D V YN +++ Y L EA + + M SP V +
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
+I+ + A+ + +LR ++ K G + VF+ MRSR
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 412 D----LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
D LV ++SM++ + G++D+A++ F ++ L D+V L+Q + G +S
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 468 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGA 523
+ + ++ N+++ K L A LF +MTER L + ++
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
+ GN ++LF MK I+ D +T+ ++L G ++ +I+ M+ + I+P
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILP 548
Query: 584 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLY---GDTEIGEAIA 640
+ Y+ +++ L G L EA+ + M S + + S + Y G+ GE+
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 641 KQIL 644
++++
Sbjct: 609 EKMI 612
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/520 (20%), Positives = 219/520 (42%), Gaps = 30/520 (5%)
Query: 80 SLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
SL+R+ G +E A V+ EI+ ++ ++ A G G F S +Q
Sbjct: 209 SLVRI----GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF--LSQVQ 262
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
++ +YP+ VT +L+ A + G ++E + +GF + T+++ K G
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY-NTVINGLCKHGKY 321
Query: 196 KMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
+ A VF +M + S ++ L+ G +E ++F M R V+PDL+ ++
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKA-----RKMFERLR 308
+ L + G+ PD V T L+ Y + + +M ++
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 368
D V YN ++ G K + EA +F+EM + ++ P+ LI L +++ A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYV 424
+ + + V N ++ + K G + A+ ++ M S+++ +S++ ++
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE-VHCLTYRAFHGKEL 483
GH+ EA ++ + +N++ + S+++ + G S + + + F +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 484 SVNNSLITTYAKCGKLNMARYLFQQMTERC------LTSWNAMLGAYAMHGNYAEVLKLF 537
S N +LI + + ++ A L ++M E + ++N++L + E +
Sbjct: 622 SYN-TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 538 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
M + PD T+T ++ + E +I M++
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 170/388 (43%), Gaps = 32/388 (8%)
Query: 12 LVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNL 71
L+ +C++ E + + D++ S D +C S ++L F + ++D +
Sbjct: 347 LMEACKKGDVVETEKVFSDMR----SRDVVPDLVCFSSMMSL----FTRSGNLDKALMYF 398
Query: 72 NS--------DCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHS 119
NS D + + LI+ Y G + A + +E+ + D+V Y +I+
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
+ A ++ + M ++ L+P+ TL L+ KLG+LQ + + + D
Sbjct: 459 --KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL-DV 515
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQ 237
+ TLLD + K G + A ++ M + T S++ L+ A G EAF ++ +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 238 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV-DLYSKFD 296
MI + + P ++ + I G+S MI G PD ++ L+ + +
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 297 VTKARKMFERLRNK------DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 350
++KA + +++ + D YN ++ G+ + + EA V +MI+ V+P+ + +
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 351 LNLISAVSDLRDIRLARSIHGYVLRHQY 378
+I+ ++ A IH +L+ +
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 186/409 (45%), Gaps = 27/409 (6%)
Query: 54 GRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAY 109
G+ E K V + ++ L+ D SL+ + G + + +VF ++ ++ DLV +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 110 TSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYA 169
+S+++ + SG + A +++++ L P+ V L+ + G + +
Sbjct: 379 SSMMSLFTRSGN--LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 170 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSW--NPLIAAYLHNGQ 227
+++G + D + T+L K + A +F +M + S+ LI + G
Sbjct: 437 LQQGCAM-DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
A ELF++M +++ D++T + ++ + K I M+ + P ++ +
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 288 LVD-LYSKFDVTKARKMFERLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
LV+ L SK + +A ++++ + +K+ +I N M+ GY ++ + + +MI
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 343 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ-----YITRVEIANQIIHTYAKCGY 397
P+ + LI +R+ ++++ G V + + + V N I+H + +
Sbjct: 616 FVPDCISYNTLIYGF--VREENMSKAF-GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 398 LQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAI-ILFRLLQR 441
++ A +V +M R D ++T MI G+V ++ EA I +LQR
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 11/274 (4%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C+R+ GE + + ++ D +T+ + LG L+ + + + D
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDL----VAYTSIITAYAHSGGSCVYGAFRIA 131
++L+ + + G ++ A ++ ++ +K++ ++Y+ ++ A G + AFR+
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH--LAEAFRVW 573
Query: 132 STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 191
M + + P + S++ + G+ +G + I GF V D I TL+ + +
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF-VPDCISYNTLIYGFVR 632
Query: 192 CGGVKMAAAVFGKMNATS----TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
+ A + KM V ++N ++ + Q EA + R+MI R V PD
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 248 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
T I D L IH M++ G PD
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 10/227 (4%)
Query: 426 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 485
G+ EA+ + L+ + +D + L+ L + + L A + VH ++
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNA-----MLGAYAMHGNYAEVLKLFNHM 540
N++I Y+ C ++ A +F++M E WN+ M+ + +G E + LF
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPE-----WNSGTLCVMMRCFVNNGYGEEAIDLFTRF 211
Query: 541 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
K KP+ F + + C+ +G V+EG F++M REY IVP HY+ + +L+ +G
Sbjct: 212 KEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGH 271
Query: 601 LTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLE 647
L EA N V+ MP S TL++ R++GD E+G+ A+ + KL+
Sbjct: 272 LDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/557 (21%), Positives = 244/557 (43%), Gaps = 26/557 (4%)
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 192
M R P+ LL A AK+ ++ G ++R G+ ++ L++ + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL-GEKMQR-LGISHNLYTYNILINCFCRR 58
Query: 193 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 250
+ +A A+ GKM ++ + + L+ Y H + +A L QM+ PD +T
Sbjct: 59 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 251 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLR- 308
I + ++ M++ G +P++V +V+ L + D+ A + ++
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 309 ---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
D VI+N ++ K +A+N+F EM + PNV + +LIS +
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 421
A + ++ + + N +I + K G A + + M R D+ ++ S+I
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRAFHG 480
G+ H +D+A +F + ++ D T +L++ + + E+ +++R G
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEVLKL 536
++ +LI G + A+ +F+QM + +++ +L +G + L++
Sbjct: 359 DTVTYT-TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F++M+ IK D +T+++ +G V++G +F S+ + + P V YN +I L
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLC 476
Query: 597 RAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 653
L EAY L+K M S TL+ A GD + +++ +S
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 536
Query: 654 YV-LISNILAEGGRWDE 669
+ L++N+L + GR D+
Sbjct: 537 TIGLVANMLHD-GRLDK 552
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 213/535 (39%), Gaps = 88/535 (16%)
Query: 106 LVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI 165
+V +S++ Y H G + A + M + P+ +T +L+H E A+
Sbjct: 80 IVTLSSLLNGYCH--GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 166 HGYAIRRGFGVCDEIFET--TLLDMYHKCGGVKMAAAVFGKMNAT--STTVGSWNPLIAA 221
++RG C T +++ K G + +A + KM A V +N +I +
Sbjct: 138 VDRMVQRG---CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 222 YLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 281
+A LF++M + + P+++T + +++SC LC G D
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYS-SLISC-----LCS----------YGRWSD 238
Query: 282 MVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
A L D M E+ N + V +N ++ ++K VEA + +MIK
Sbjct: 239 --ASQLLSD------------MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
S+ P++ + +LI+ + A+ + +++ ++ N +I + K ++
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 402 RLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
+F M R D V++T++I G H G D A +F+ + + + D +T LL
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 458 LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSW 517
L G L EV ++ ++ + ++I K GK++ W
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD--------------DGW 450
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
+ LF + L +KP+ +T+ ++++ L++E + + M +
Sbjct: 451 D-----------------LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM-K 492
Query: 578 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 632
E +P YN +I R G + L++ M S CR GD
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS-------------CRFVGD 534
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/423 (19%), Positives = 170/423 (40%), Gaps = 74/423 (17%)
Query: 271 GYMIRMGVEPDMVACTALVDLYSKFD-----VTKARKMFERLRNKDAVIYNVMMTGYLKN 325
G M+++G EP +V ++L++ Y V +M E D + + ++ G +
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
+ EA+ + M++ PN+ + +++ + DI LA ++ L ++E
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL----LNKMEAAKIE-- 182
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 445
D+V + ++I + H+D+A+ LF+ ++ + +R
Sbjct: 183 -------------------------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 446 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 505
+ VT SL+ L G S ++ E +N +L+T
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMI------EKKINPNLVT-------------- 257
Query: 506 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA-CSHSGL 564
+NA++ A+ G + E KL + M +I PD T+ S++ C H L
Sbjct: 258 -----------FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS---THSSAALC 621
++ Q+F M+ + P YN +I ++ ++ + L + M +
Sbjct: 307 -DKAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 622 TLLSACRLYGDTEIGEAIAKQILKLE-PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 680
TL+ GD + + + KQ++ P + +Y ++ + L G+ ++ + +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 681 ELK 683
E+K
Sbjct: 425 EIK 427
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 149/367 (40%), Gaps = 46/367 (12%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQR 138
SSLI YG+ DA ++ ++ K +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEK---------------------------------K 250
Query: 139 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKM 197
+ PN VT +L+ A K G E +H I+R + +IF +L++ + +
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--SIDPDIFTYNSLINGFCMHDRLDK 308
Query: 198 AAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
A +F M + + ++N LI + + + + ELFR+M HR ++ D +T I
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK---- 310
+ + + M+ GV PD++ + L+D L + + KA ++F+ ++
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
D IY M+ G K + ++F + V PNV + +IS + R ++ A ++
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 371 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV---SWTSMITGYVHHG 427
+ + N +I + + G + + MRS V S ++ +H G
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Query: 428 HIDEAII 434
+D++ +
Sbjct: 549 RLDKSFL 555
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 213/520 (40%), Gaps = 102/520 (19%)
Query: 94 AHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSL 149
AH +FDE+ + D Y+++IT++ G A M+ R+ + V +L
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEG--MFDSALSWLQKMEQDRVSGDLVLYSNL 231
Query: 150 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS 209
+ + +L + +I R G D + +++++Y K + A + +MN
Sbjct: 232 IELSRRLCDYSKAISIFSRLKRSGI-TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 210 T--TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 267
S++ L++ Y+ N + LEA +F +M ++CA
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE--------------VNCA--------- 327
Query: 268 SIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKD----AVIYNVMMTGY 322
D+ C ++D+Y + D+ K A ++F LR D V YN ++ Y
Sbjct: 328 ------------LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 382
+ +L EAI++F M + + NV + +I I+G + H+ T +
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK-------------IYGKTMEHEKATNL 422
Query: 383 EIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRL 438
M+SR + ++++++I+ + G +D A LF+
Sbjct: 423 ----------------------VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 439 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN---NSLITTYAK 495
L+ + ID V +++ A ++G + K R H +L N + IT AK
Sbjct: 461 LRSSGVEIDQVLYQTMIVAYERVGLMGHAK-------RLLHELKLPDNIPRETAITILAK 513
Query: 496 CGKLNMARYLFQQMTE----RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 551
G+ A ++F+Q E + ++ + M+ Y+ + Y V+++F M+ PD
Sbjct: 514 AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 573
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 591
+L A E+ ++R M E + P EVH+ +
Sbjct: 574 IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 176/399 (44%), Gaps = 29/399 (7%)
Query: 294 KFDVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 349
+FD+ A +F+ +R + D Y+ ++T + K + A++ +M + VS ++ L
Sbjct: 170 QFDI--AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL 227
Query: 350 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 409
+ NLI L D A SI + R + N +I+ Y K + ARL+ M
Sbjct: 228 YSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMN 287
Query: 410 S----RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 465
+ VS++++++ YV + EA+ +F ++ N +D T ++ QL
Sbjct: 288 EAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM-- 345
Query: 466 AVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMT----ERCLTSW 517
VKE L + + ++ N N+++ Y + A +LF+ M E+ + ++
Sbjct: 346 -VKEADRLFW-SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
N M+ Y + + L M+ I+P+ +T+++I++ +G ++ +F+ + R
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL-R 462
Query: 578 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS--MPSTHSSAALCTLLSACRLYGDTEI 635
+ +V Y +I R G + A L+ +P T+L+ G TE
Sbjct: 463 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA---GRTEE 519
Query: 636 GEAIAKQILKL-EPRNSSSYVLISNILAEGGRWDEVAHI 673
+ +Q + E ++ S + + N+ + R+ V +
Sbjct: 520 ATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 123/542 (22%), Positives = 230/542 (42%), Gaps = 70/542 (12%)
Query: 185 LLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
L+ +Y + G ++ + +F M + +V + N ++ + + +G+ + + ++M+ RK
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 243 VLPDLLTLANAI-LSCAE-----LDYLCHGKSIHGY------------------------ 272
+ PD+ T I + CAE YL GY
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 273 -----MIRMGVEPDMVACTALV-DLYSKFDVTKA----RKMFERLRNKDAVIYNVMMTGY 322
M GV+ D+ L+ DL + K R M +R+ + + V YN ++ G+
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 323 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 382
+ A + +EM+ +SPN F LI + + A + Y++ + +T
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPS 407
Query: 383 EIA-NQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFR 437
E++ ++ K AR + RM+ + +++T MI G +G +DEA++L
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 438 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 497
+ ++ + D VT +L+ ++G KE+ C YR + ++LI + G
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 498 KLNMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
L A +++ M R ++N ++ + G AE + M I P+ ++F
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 554 SILTACSHSGLVEEGLQIFRSMIREYTIV---PGEVHYNCIIDLLSRAGQLTEAYNLVKS 610
++ +SG EGL+ F S+ E T V P Y ++ L + G L EA +KS
Sbjct: 588 CLINGYGNSG---EGLKAF-SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 611 M---PSTHSSAALCTLLSACRLYGD-----TEIGEAIAKQILKLEPRNSSSYVLISNILA 662
+ P+ + TLL+A G+ + GE + + IL P + + LIS +
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL---PDSYTYTSLISGLCR 700
Query: 663 EG 664
+G
Sbjct: 701 KG 702
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/555 (21%), Positives = 227/555 (40%), Gaps = 24/555 (4%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDL----VAYTSIITAYAHSGGSCVYGAFRIASTM 134
++LI +S GK+ A ++ +E+ + L V + ++I + G A ++ M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN--FKEALKMFYMM 399
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+ + L P+ V+ LL K R + R G V I T ++D K G
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV-GRITYTGMIDGLCKNGF 458
Query: 195 VKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
+ A + +M + + +++ LI + G+ A E+ ++ + P+ + +
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDA 312
I +C + L I+ MI G D LV K + F R D
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 313 VI-----YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
++ ++ ++ GY + ++A +VF EM K+ P + +L+ + +R A
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGY 423
+ + N ++ K G L A +F M R D ++TS+I+G
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 424 VHHGHIDEAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 482
G AI+ + + R N+ + V + + + G A H +
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 483 LSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEVLKLFN 538
+ N++I Y++ GK+ L +M + LT++N +L Y+ + + L+
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 539 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 598
+ L I PD+LT S++ S ++E GL+I ++ I V +N +I
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD-RYTFNMLISKCCAN 877
Query: 599 GQLTEAYNLVKSMPS 613
G++ A++LVK M S
Sbjct: 878 GEINWAFDLVKVMTS 892
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/584 (20%), Positives = 224/584 (38%), Gaps = 59/584 (10%)
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGSCVYGA 127
NS+ V LIR+Y G ++D+ +F + N + +I+ + SG +
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 128 FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLD 187
F M +++ P+ T L++ GS ++ + + G+ + T+L
Sbjct: 220 F--LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY-NTVLH 276
Query: 188 MYHKCGGVKMAAAVFGKMNA--TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
Y K G K A + M + V ++N LI + + + + L R M R + P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMF 304
+ +T I + + + M+ G+ P+ V AL+D + S+ + +A KMF
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 305 ERLRNK---------------------------------------DAVIYNVMMTGYLKN 325
+ K + Y M+ G KN
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
EA+ + +EM K + P++ + LI+ + + A+ I + R I
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 386 NQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
+ +I+ + G L+ A ++ M +RD ++ ++T G + EA R +
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 442 ENLRIDSVTLISLLQALSQLG-CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ + ++V+ L+ G L A +T + H SL+ K G L
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 501 MARYLFQQM----TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
A + + +N +L A GN A+ + LF M +I PD T+TS++
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 600
+ G + + ++P +V Y C +D + +AGQ
Sbjct: 696 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 175/416 (42%), Gaps = 23/416 (5%)
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFR 129
D + ++L+ + G L A +F E+ + D YTS+I+ G + + F
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 130 IASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT-LLDM 188
+ + L PN+V + K G + G I+ G +I T ++D
Sbjct: 712 KEAEARGNVL-PNKVMYTCFVDGMFKAGQWKAG--IYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 189 YHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD 246
Y + G ++ + +M + + ++N L+ Y +F L+R +I +LPD
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 247 LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD-------MVACTALVDLYSKFDVTK 299
LT + +L E + L G I I GVE D + C A ++ FD+ K
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 300 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 359
+KD + M++ +N E+ V HEM K +SP ++ LI+ +
Sbjct: 889 VMTSLGISLDKDTC--DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 946
Query: 360 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 419
+ DI+ A + ++ H+ + ++ AKCG A L+ M LV +
Sbjct: 947 VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 1006
Query: 420 ITGYVH----HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
T +H +G++ EA+ L ++ L++D V+ L+ L G ++ E++
Sbjct: 1007 FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 151/705 (21%), Positives = 272/705 (38%), Gaps = 95/705 (13%)
Query: 9 TGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIK 68
TG + C+ E + ++ D + + +GR + K + +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 69 LNLNSDCFVGSSLIRLYSEYGKLEDAHRVFD----EITNKDLVAYTSIITAYAHSGGSCV 124
+ L+ + + S+LI G L++A R+++ E +D + ++T+ +G V
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK--V 564
Query: 125 YGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFET- 183
A M + PN V+ L++ G EG + F V DE+ +
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG---EG--------LKAFSVFDEMTKVG 613
Query: 184 ---------TLLDMYHKCGGVKMAAAVFGKMNATSTTVGS--WNPLIAAYLHNGQALEAF 232
+LL K G ++ A ++A V + +N L+ A +G +A
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673
Query: 233 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCH-GKSIHGYMI------RMGVEPDMVAC 285
LF +M+ R +LPD T + I LC GK++ + R V P+ V
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISG------LCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 286 TALVDLYSKFDVTKARKMF-ERLRN----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
T VD K KA F E++ N D V N M+ GY + + ++ EM
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 341 MSVSPNVALFLNLISAVSDLRDIR----LARSI------------HGYVLRHQYITRVEI 384
+ PN+ + L+ S +D+ L RSI H VL +EI
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
+I+ + C ++ R FN +I+ +G I+ A L +++ +
Sbjct: 848 GLKILKAFI-CRGVEVDRYTFNM-----------LISKCCANGEINWAFDLVKVMTSLGI 895
Query: 445 RIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+D T +++ L++ + V H ++ + E LI + G + A
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI-SPESRKYIGLINGLCRVGDIKTAF 954
Query: 504 YLFQQMTERCLTSWN----AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
+ ++M + N AM+ A A G E L M + P +FT+++ C
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 1014
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
+G V E L++ R ++ + V YN +I L G + A+ L + M A
Sbjct: 1015 CKNGNVIEALEL-RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073
Query: 620 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEG 664
T +A+ + +L E S + +++ ++LA G
Sbjct: 1074 ATTY-------------KALIRGLLARETAFSGADIILKDLLARG 1105
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 139/315 (44%), Gaps = 11/315 (3%)
Query: 306 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 365
RL N + +Y++++ YL+ + +++ +F M +P+V ++ +V +
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 366 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMIT 421
S +L+ + V N +I+ G + + + +M + +V++ +++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHG 480
Y G AI L ++ + + D T L+ L + ++ + + R H
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 481 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKL 536
E++ N+LI ++ GK+ +A L +M L+ ++NA++ + GN+ E LK+
Sbjct: 337 NEVTY-NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 537 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 596
F M+ + P E+++ +L + + + M R V G + Y +ID L
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV-GRITYTGMIDGLC 454
Query: 597 RAGQLTEAYNLVKSM 611
+ G L EA L+ M
Sbjct: 455 KNGFLDEAVVLLNEM 469
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/564 (21%), Positives = 243/564 (43%), Gaps = 69/564 (12%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTL 185
A + M R +P+ V LL A AK+ I + G+ ++ +
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTYSIF 116
Query: 186 LDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
++ + + + +A A+ GKM ++ + N L+ + H + EA L QM+
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARK 302
PD +T + + + ++ M+ G +PD+V A+++ L + + A
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 303 MFERLRN----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+ ++ D VIYN ++ G K +A ++F++M + P+V + LIS +
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSR----DL 413
+ A + +L + N +I + K G L A +++ M +S+ D+
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
V++ ++I G+ + ++E + +FR + + L ++VT +L+
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI------------------ 398
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGN 529
HG + + + A+ +F+QM + ++N +L +GN
Sbjct: 399 -----HG------------FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
L +F +M+ ++K D +T+T+++ A +G VE+G +F S+ + + P V Y
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYT 500
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKL 646
++ R G EA L M +S TL+ A GD EA + +++K
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD----EAASAELIK- 555
Query: 647 EPR------NSSSYVLISNILAEG 664
E R ++S++ L++N+L +G
Sbjct: 556 EMRSCGFAGDASTFGLVTNMLHDG 579
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 23/331 (6%)
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD----IRLARSIHGYVLRHQYITRVEIA 385
+AI +F +M+K P++ F L+SA++ + I L + + H T
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY---- 113
Query: 386 NQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
+ I+ + + L A + +M +V+ S++ G+ H I EA+ L +
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 442 ENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ D+VT +L+ L Q S AV V + + +L ++I K G+ +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ-PDLVTYGAVINGLCKRGEPD 232
Query: 501 MARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
+A L +M E + +N ++ + + + LFN M+ IKPD T+ ++
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL----VKSMP 612
+ + G + ++ M+ E I P V +N +ID + G+L EA L VKS
Sbjct: 293 SCLCNYGRWSDASRLLSDML-EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 613 STHSSAALCTLLSACRLYGDTEIGEAIAKQI 643
A TL+ Y E G + +++
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 190/443 (42%), Gaps = 26/443 (5%)
Query: 45 LCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT-- 102
C +S ++L GK +KL +SL+ + ++ +A + D++
Sbjct: 120 FCRRSQLSLALAILGKM-----MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 103 --NKDLVAYTSIITA-YAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSL 159
D V +T+++ + H+ S A + M + P+ VT ++++ K G
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKAS---EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 160 QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNP 217
+ + +G D + T++D K + A +F KM V ++NP
Sbjct: 232 DLALNLLN-KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 218 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 277
LI+ + G+ +A L M+ + + PDL+ I + + L + ++ M++
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 278 -VEPDMVACTALVDLYSKFDVTKA-----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 331
PD+VA L+ + K+ + R+M +R + V Y ++ G+ + A
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 332 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 391
VF +M+ V P++ + L+ + + ++ A + Y+ + + +I
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 392 YAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 447
K G ++ +F + + ++V++T+M++G+ G +EA LF ++ + +
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530
Query: 448 SVTLISLLQALSQLGCLSAVKEV 470
S T +L++A + G +A E+
Sbjct: 531 SGTYNTLIRARLRDGDEAASAEL 553
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/421 (18%), Positives = 150/421 (35%), Gaps = 97/421 (23%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
C+ +H + + ++ D + GR R+ D ++ N+N D
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQ 135
++LI + + GKL +A +++DE+ ++
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEM--------------------------------VK 348
Query: 136 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 195
+ +P+ V +L+ K ++EG + +RG V + + TTL+ + +
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL-VGNTVTYTTLIHGFFQARDC 407
Query: 196 KMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
A VF +M + + ++N L+ +NG A +F M R + D++T
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAV 313
I + + + G + + GV+P++V
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVT----------------------------- 498
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
Y MM+G+ + L EA +F EM + PN + LI A LRD A S
Sbjct: 499 -YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA--RLRDGDEAASA---- 551
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
++I CG+ A S ++T +H G +D++
Sbjct: 552 -------------ELIKEMRSCGFAGDA-------------STFGLVTNMLHDGRLDKSF 585
Query: 434 I 434
+
Sbjct: 586 L 586
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 233/539 (43%), Gaps = 80/539 (14%)
Query: 72 NSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGSCVYGA 127
N + S++I YGK+ A R+F+ + A++++I+AY SG A
Sbjct: 230 NEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG--LHEEA 287
Query: 128 FRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLD 187
+ ++M++ L PN VT +++ A K G + A ++R D I +LL
Sbjct: 288 ISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLA 347
Query: 188 MYHKCGGVKMAAAVFGKMNA--TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
+ + G + A +F +M V S+N L+ A GQ AFE+ QM ++++P
Sbjct: 348 VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP 407
Query: 246 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFE 305
++++ + I A+ ++ G M +G+ D V+ L+ +Y+K V ++ + +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK--VGRSEEALD 465
Query: 306 RLR-------NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
LR KD V YN ++ GY K E VF EM + V PN+ + LI
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG-- 523
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLV 414
Y+K G + A +F +S D+V
Sbjct: 524 ---------------------------------YSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 474
++++I +G + A+ L + +E + + VT S++ A + + +
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS--- 607
Query: 475 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC--LTSWNAMLGAYAMHGNYAE 532
+G L ++S ++ + + N LF Q+T T+ + G + +
Sbjct: 608 ----NGGSLPFSSSALSALTET-EGNRVIQLFGQLTTESNNRTTKDCEEGMQEL----SC 658
Query: 533 VLKLFNHMKLGNIKPDELTFTSILTACSH-------SGLVEEGLQIFRSMIREYTIVPG 584
+L++F M IKP+ +TF++IL ACS S L+EE L++F + + Y +V G
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE-LRLFDNKV--YGVVHG 714
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 165/358 (46%), Gaps = 23/358 (6%)
Query: 284 ACTALVDLYSKFDV-TKARKMFERLRN----KDAVIYNVMMTGYLKNDLPVEAI-NVFHE 337
A +AL+ Y + + +A +F ++ + V YN ++ K + + + F E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 338 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 397
M + V P+ F +L++ S AR++ + + V N ++ K G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 398 LQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 453
+ A + +M + ++VS++++I G+ G DEA+ LF ++ + +D V+ +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 454 LLQALSQLG----CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 509
LL +++G L ++E+ + + K++ N+L+ Y K GK + + +F +M
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIK----KDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 510 TER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 565
L +++ ++ Y+ G Y E +++F K ++ D + +++++ A +GLV
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 566 EEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
+ + M +E I P V YN IID R+ + + + SS+AL L
Sbjct: 566 GSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 164/350 (46%), Gaps = 18/350 (5%)
Query: 297 VTKARKMFERL----RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 352
VT A+++FE ++ +++ Y ++ L EAI+VF+ M + + PN+ +
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 353 LISAVSD--LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 410
+I A + ++A+ R+ N ++ ++ G + AR +F+ M +
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITF-NSLLAVCSRGGLWEAARNLFDEMTN 367
Query: 411 R----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS- 465
R D+ S+ +++ G +D A + + + + + V+ +++ ++ G
Sbjct: 368 RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 466 AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT----ERCLTSWNAML 521
A+ + Y +S N +L++ Y K G+ A + ++M ++ + ++NA+L
Sbjct: 428 ALNLFGEMRYLGIALDRVSYN-TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 522 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 581
G Y G Y EV K+F MK ++ P+ LT+++++ S GL +E ++IFR + +
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE-FKSAGL 545
Query: 582 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 631
V Y+ +ID L + G + A +L+ M S + T S +G
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 430 DEAIILFRL-LQRENLRIDSVTLIS-LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 487
D+A+ + ++RE + + L S ++ L + G ++ K + + +G + +
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272
Query: 488 SLITTYAKCGKLNMARYLFQQMTE----RCLTSWNAMLGAYAMHG-NYAEVLKLFNHMKL 542
+LI+ Y + G A +F M E L ++NA++ A G + +V K F+ M+
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 602
++PD +TF S+L CS GL E +F M I YN ++D + + GQ+
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMD 391
Query: 603 EAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 662
A+ ++ MP K+I+ N SY + + A
Sbjct: 392 LAFEILAQMP---------------------------VKRIMP----NVVSYSTVIDGFA 420
Query: 663 EGGRWDEVAHI 673
+ GR+DE ++
Sbjct: 421 KAGRFDEALNL 431
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 133/600 (22%), Positives = 251/600 (41%), Gaps = 45/600 (7%)
Query: 102 TNKDLVAYTSIITAYAHS--------GGSCVYGAF----RIASTMQDQRLYPNRVTLVSL 149
T+ +L ++T Y HS G G F R+ M+D+ + +S+
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISI 152
Query: 150 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFET--TLLDMYHKCGGVKMAAAVFGKM-- 205
+ K G G+ R C+ F++ +L++ K+AA VF M
Sbjct: 153 MRDYDKAGF--PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 206 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 265
T+ ++ ++ A+ + A L R M +P+ + I S ++ + +
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 266 GKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK----DAVIYNVMMT 320
+ M MG PD ++ KFD + +A KM R+ + D + Y +M
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 321 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI-HGYVLRHQYI 379
G K A ++F+ + K P + +F LI + A+++ V + +
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 380 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIIL 435
V N +I+ Y K G + A V + MR++ ++ S+T ++ G+ G IDEA +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 436 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 495
+ + L+ ++V L+ A + + E+ R ++ NSLI+ +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 496 CGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 551
++ A +L + M + ++N ++ A+ G E KL N M DE+T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 552 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+ S++ +G V++ +F M+R+ P + N +I+ L R+G + EA K M
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGH-APSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 612 PSTHSSAALCTLLS----ACRLYGDTEIGEAIAKQILKLE--PRNSSSYVLISNILAEGG 665
S+ + T S CR G E G + ++ L+ E P ++ ++ + + L +GG
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRA-GRIEDGLTMFRK-LQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 167/423 (39%), Gaps = 52/423 (12%)
Query: 230 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
EA +L +M +PD T + IL + D + + M+ G PD + L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 290 DLYSKFD-VTKARKMFERLRNKDAVI---------------------------------- 314
+ K V A+ +F R+ + VI
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 315 --YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
YN ++ GY K L A+ V H+M PNV + L+ L I A ++
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 373 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGH 428
+ N +I + K + A +F M + D+ ++ S+I+G
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 429 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELS--V 485
I A+ L R + E + ++VT +L+ A + G +KE L F G L
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRG---EIKEARKLVNEMVFQGSPLDEIT 566
Query: 486 NNSLITTYAKCGKLNMARYLFQQMTE----RCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 541
NSLI + G+++ AR LF++M S N ++ G E ++ M
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 542 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 601
L PD +TF S++ +G +E+GL +FR + E I P V +N ++ L + G +
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFV 685
Query: 602 TEA 604
+A
Sbjct: 686 YDA 688
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/520 (19%), Positives = 208/520 (40%), Gaps = 54/520 (10%)
Query: 62 VHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGG 121
V D + + F +++ + +++ A + ++T V + I HS
Sbjct: 204 VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLS 263
Query: 122 SC--VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE 179
C V A ++ M P+ T ++ K + E + + RGF D+
Sbjct: 264 KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP-DD 322
Query: 180 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
I L++ K G V A +F ++ + +N LI ++ +G+ +A + M+
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI--FNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 240 HR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DV 297
++PD+ T + I + + + M G +P++ + T LVD + K +
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 298 TKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
+A + + + V +N +++ + K EA+ +F EM + P+V F +L
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM----R 409
IS + ++ +I+ A + ++ + N +I+ + + G ++ AR + N M
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 469
D +++ S+I G G +D+A LF + R+ A S + C
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG------------HAPSNISC------ 602
Query: 470 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYA 525
N LI + G + A ++M R T ++N+++
Sbjct: 603 -----------------NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 526 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 565
G + L +F ++ I PD +TF ++++ G V
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/557 (21%), Positives = 222/557 (39%), Gaps = 67/557 (12%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTL 185
A + M R +P+ V LL A AK+ I + G+ ++ + L
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTYSIL 122
Query: 186 LDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
++ + + + +A AV KM + + N L+ + H + +A L QM+
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARK 302
PD T I + ++ M+ G +PD+V +V+ L + D+ A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 303 MFERLRN----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+ +++ VIYN ++ +A+N+F EM + PNV + +LI +
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLV 414
+ A + ++ + V + +I + K G L A +++ M R D+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL----------------ISLLQAL 458
+++S+I G+ H +DEA +F L+ ++ + VT + L + +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 459 SQLGCLSAVKEVHCLTYRAFHGKELS---------VNNSL---ITTYA-------KCGKL 499
SQ G + L + F +E V++ + I TY+ GK+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 500 NMA----RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 555
A YL + E + ++N M+ G + LF + L +KP+ +T+T++
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
++ GL EE +FR M +E +P YN +I R G + L++ M S
Sbjct: 543 MSGFCRKGLKEEADALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS-- 599
Query: 616 SSAALCTLLSACRLYGD 632
CR GD
Sbjct: 600 -----------CRFVGD 605
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/514 (19%), Positives = 206/514 (40%), Gaps = 87/514 (16%)
Query: 105 DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
D+V S++ + H G+ + A + M + P+ T +L+H + E A
Sbjct: 150 DIVTLNSLLNGFCH--GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 165 IHGYAIRRGF------------GVCDE----------------------IFETTLLDMYH 190
+ + +G G+C + T++D
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 191 KCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
V A +F +M+ V ++N LI + G+ +A L MI RK+ P+++
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERL 307
T + I + + L + ++ MI+ ++PD+ ++L++ + D + +A+ MFE +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 308 RNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 363
+KD V YN ++ G+ K E + +F EM + + N + LI
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI--------- 438
Query: 364 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSM 419
H + E N A++VF +M S D+++++ +
Sbjct: 439 ------------HGFFQARECDN--------------AQIVFKQMVSDGVLPDIMTYSIL 472
Query: 420 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 479
+ G ++G ++ A+++F LQR + D T +++ + + G + ++ C
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 480 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLK 535
+ ++++ + + G A LF++M E ++N ++ A+ G+ A +
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGL 569
L M+ D T ++T H G +++
Sbjct: 593 LIREMRSCRFVGDASTI-GLVTNMLHDGRLDKSF 625
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 146/368 (39%), Gaps = 67/368 (18%)
Query: 14 ASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNS 73
A C ++ + L + ++ N + ++ GR R+ D I+ +N
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 74 DCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFR 129
+ S+LI + + GKL +A +++DE+ + D+ Y+S+I + C++
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF------CMHDRLD 378
Query: 130 IASTMQD----QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTL 185
A M + + +PN VT +L+ K + EG + +RG
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL----------- 427
Query: 186 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 245
TV ++ LI + + A +F+QM+ VLP
Sbjct: 428 ----------------------VGNTV-TYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 246 DLLTLANAILSCAELDYLCHGKSIHG------YMIRMGVEPDMVACTALVDLYSKF-DVT 298
D++T +IL LD LC+ + Y+ R +EPD+ +++ K V
Sbjct: 465 DIMTY--SIL----LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 299 KARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
+F L K + V Y MM+G+ + L EA +F EM + P+ + LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 355 SAVSDLRD 362
A LRD
Sbjct: 579 RA--HLRD 584
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 214/518 (41%), Gaps = 27/518 (5%)
Query: 109 YTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGY 168
+ ++ + Y++S G+ Y + + ++D V + L + G L+EG
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFALED-------VESNNHLRQMVRTGELEEGFKFLEN 127
Query: 169 AIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTT--VGSWNPLIAAYLHNG 226
+ G V D I TTL+ + + G + AA + + + V ++N +I+ Y G
Sbjct: 128 MVYHG-NVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT 286
+ A + +M V PD++T + S + L + M++ PD++ T
Sbjct: 187 EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 287 ALVDLYSK-FDVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
L++ + V A K+ + +R++ D V YNV++ G K EAI ++M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 401
PNV ++ ++ A + +LR + V N +I+ + G L A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 402 RLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 457
+ +M + +S+ ++ G+ +D AI + D VT ++L A
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 458 LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT-- 515
L + G + E+ L N++I AK GK A L +M + L
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 516 --SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
++++++G + G E +K F+ + I+P+ +TF SI+ S + +
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
MI P E Y +I+ L+ G EA L+ +
Sbjct: 544 FMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 159/423 (37%), Gaps = 80/423 (18%)
Query: 68 KLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKD----LVAYTSIITAYAHSGGSC 123
+++++ D ++++R + GKL+ A V D + +D ++ YT +I A G
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-- 254
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQE---------------------- 161
V A ++ M+D+ P+ VT L++ K G L E
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 162 --------GRAIHGYAI-----RRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--N 206
GR + + R+GF F L++ + G + A + KM +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF-NILINFLCRKGLLGRAIDILEKMPQH 373
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
S+NPL+ + + A E +M+ R PD++T + + + +
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKD----AVIYNVMMTG 321
I + G P ++ ++D +K T KA K+ + +R KD + Y+ ++ G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
+ EAI FHE +M + PN F +++ + R A
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA--------------- 538
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
+ + + NR + S+T +I G + G EA+ L L
Sbjct: 539 ----------------IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 442 ENL 444
+ L
Sbjct: 583 KGL 585
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 487 NSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 545
N +I+ Y K G++N A + +M+ + ++N +L + G + +++ + M +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 546 KPDELTFTSILTA-CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 604
PD +T+T ++ A C SG V +++ M R+ P V YN +++ + + G+L EA
Sbjct: 236 YPDVITYTILIEATCRDSG-VGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 605 YNLVKSMPST 614
+ MPS+
Sbjct: 294 IKFLNDMPSS 303
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 223/533 (41%), Gaps = 42/533 (7%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ VT +LLH + E A+ GY + GF A A
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGF---------------------LEAVA 212
Query: 201 VFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F +M T V ++N LI G+ LEA L +M+ + + D++T +
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK----DAV 313
++ ++ M ++PD+V +A++D L + A+ +F + K +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
YN M+ G+ +A + +MI+ ++P+V F LISA + A + +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
L N +I+ + K A+ +F+ M S D+V++ ++I Y +DE +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG--KELSVNNSLIT 491
L R + R L ++ T +L+ ++ L+A +++ HG + N L+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL--FQEMISHGVCPDTITCNILLY 510
Query: 492 TYAKCGKLNMARYLFQ--QMTERCL--TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
+ + KL A LF+ QM++ L ++N ++ E LF + + ++P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 607
D T+ +++ + + +F M ++ P YN +I +AG++ ++ L
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 608 VKSMPSTHSSAALCTLLSA----CRLYGDTEIGEAIAKQILKLEPRNSSSYVL 656
+ M S S T+ A CR+ D EI E + + E + YV+
Sbjct: 630 ISEMRSNGFSGDAFTIKMAEEIICRV-SDEEIIENYLRPKINGETSSIPRYVV 681
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 213/474 (44%), Gaps = 48/474 (10%)
Query: 216 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC-AELDYLCHGKSIHGYMI 274
N +I ++ + A L+R+M R++ ++ + N ++ C + L S G +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF-NILIKCFCDCHKLSFSLSTFGKLT 168
Query: 275 RMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 334
++G +PD+V L+ + +R+ A+ ++ TG+L EA+ +
Sbjct: 169 KLGFQPDVVTFNTLL---------HGLCLEDRISEALALFGYMVETGFL------EAVAL 213
Query: 335 FHEMIKMSVSPNVALFLNLISAVS-DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 393
F +M+++ ++P V F LI+ + + R + A ++ V + +I V I++
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT-IVNGMC 272
Query: 394 KCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 449
K G + A + ++M D+V ++++I GH +A LF + + + +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 450 TLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 508
T ++ G S A + + + R + L+ N+LI+ K GKL A L +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF-NALISASVKEGKLFEAEKLCDE 391
Query: 509 MTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
M RC+ ++N+M+ + H + + +F+ M PD +TF +I+ +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447
Query: 565 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 624
V+EG+Q+ R + R +V YN +I L A +L + M S +C
Sbjct: 448 VDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM----ISHGVCPDT 502
Query: 625 SACR--LYG---DTEIGEAI----AKQILKLEPRNSSSYVLISNILAEGGRWDE 669
C LYG + ++ EA+ Q+ K++ ++ +Y +I + + +G + DE
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKID-LDTVAYNIIIHGMCKGSKVDE 555
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 137/320 (42%), Gaps = 35/320 (10%)
Query: 36 FSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAH 95
F+ +C C + GR +R+ D I+ +N D ++LI + GKL +A
Sbjct: 332 FTYNCMIDGFC-----SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 96 RVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLH 151
++ DE+ ++ D V Y S+I + C + F A M D P+ VT +++
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGF------CKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 152 AAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATS 209
+ + EG + RRG V + TL+ + + + A +F +M +
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 210 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 269
+ N L+ + N + EA ELF + K+ DL T+A I+ + +C G +
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAYNII----IHGMCKGSKV 553
Query: 270 HG------YMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNK----DAVIYNVM 318
+ GVEPD+ ++ + K ++ A +F ++++ D YN +
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 319 MTGYLKNDLPVEAINVFHEM 338
+ G LK ++I + EM
Sbjct: 614 IRGCLKAGEIDKSIELISEM 633
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 192/454 (42%), Gaps = 65/454 (14%)
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD--------------------------- 246
S+ ++ LHN Q +A +LF +M+H + LP
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 247 -------LLTLANAILSCAEL-DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-V 297
LL N ++ C L C G M+++G EPD+V T+L++ Y ++ +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 298 TKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
A +F+++ + V Y ++ KN A+ +F++M PNV + L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVE----IANQIIHTYAKCGYLQYARLVFNRMR 409
++ + ++ A ++LR R+E +I + K G L A+ ++N M
Sbjct: 230 VTGLCEIGRWGDA----AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 410 S----RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 465
D+ ++ S+I G +G +DEA +F L++R + V +L+ C S
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF----CKS 341
Query: 466 AVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTER----CLTSW 517
E + K + N LI Y G+ ++A+ +F QM+ R + ++
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
N +L +G + L +F +M+ + + +T+T I+ G VE+ +F S+
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 578 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+ + P + Y +I R G + EA +L K M
Sbjct: 462 K-GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 49/391 (12%)
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGS 122
+KL D +SL+ Y + ++EDA +FD+I ++V YT++I +
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH- 203
Query: 123 CVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE 182
+ A + + M PN VT +L+ ++G + +
Sbjct: 204 -LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL----------------- 245
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
L DM + V ++ LI A++ G+ +EA EL+ MI
Sbjct: 246 --LRDMMKR---------------RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKAR 301
V PD+ T + I L + + M R G P+ V T L+ + K V
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 302 KMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
K+F + K + + Y V++ GY P A VF++M P++ + L+ +
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DL 413
+ A I Y+ + + + II K G ++ A +F + S+ ++
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
+++T+MI+G+ G I EA LF+ ++ +
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/536 (19%), Positives = 225/536 (41%), Gaps = 72/536 (13%)
Query: 56 LEFGKRVHVDSIKL---NLNSDCFVGSSLIRLYSEY----------------------GK 90
L +G + VDS + L+ DC+ ++ I ++ E+ G+
Sbjct: 202 LNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR 261
Query: 91 LEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTL 146
+++AH + + K D+++Y++++ Y G + +++ M+ + L PN
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE--LDKVWKLIEVMKRKGLKPNSYIY 319
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
S++ ++ L E IR+G + D + TTL+D + K G ++ A+ F +M+
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 207 ATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 264
+ T V ++ +I+ + G +EA +LF +M + + PD +T I + ++
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLK 324
+H +MI+ G P++V T L+D K +
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCK-----------------------------E 469
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
DL A + HEM K+ + PN+ + ++++ + +I A + G
Sbjct: 470 GDLD-SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRLLQ 440
++ Y K G + A+ + M + L V++ ++ G+ HG +++ L +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ + ++ T SL++ L A ++ G + +L+ + K +
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 501 MARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
A +LFQ+M + +++++ ++ + + E ++F+ M+ + D+ F
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/573 (19%), Positives = 223/573 (38%), Gaps = 94/573 (16%)
Query: 70 NLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY-AHSGGSCVYGAF 128
+ SD V ++ ++G L +A RVF+++ N LV Y C +
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC----Y 225
Query: 129 RIASTMQDQRLYP------NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE 182
+ A+ + R +P N + ++H +LG ++E +
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL----------------- 268
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
LL M ++ + V S++ ++ Y G+ + ++L M +
Sbjct: 269 --LLLM---------------ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKAR 301
+ P+ + I + L + MIR G+ PD V T L+D + K D+ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 302 KMFERLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
K F + ++D + Y +++G+ + VEA +FHEM + P+ F LI+
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDL 413
++ A +H ++++ V +I K G L A + + M ++
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
++ S++ G G+I+EA+ L + L D+VT +L+ A
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA---------------- 535
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGN 529
Y K G+++ A+ + ++M + L ++N ++ + +HG
Sbjct: 536 -------------------YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
+ KL N M I P+ TF S++ ++ I++ M + P Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYE 635
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 622
++ +A + EA+ L + M S ++ T
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 151/347 (43%), Gaps = 16/347 (4%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRL-EFGKRVHVDSIKLNLNSD 74
C+R + + ++ + + D T + +G + E GK H K L D
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPD 420
Query: 75 CFVGSSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGSCVYGAFRI 130
+ LI Y + G ++DA RV + + + ++V YT++I G + A +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD--LDSANEL 478
Query: 131 ASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYH 190
M L PN T S+++ K G+++E + G G D + TTL+D Y
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYC 537
Query: 191 KCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
K G + A + +M T+ ++N L+ + +G + +L M+ + + P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL 307
T + + + L +I+ M GV PD LV + K ++ +A +F+ +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 308 RNKDAVI----YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 350
+ K + Y+V++ G+LK +EA VF +M + ++ + +F
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/536 (19%), Positives = 225/536 (41%), Gaps = 72/536 (13%)
Query: 56 LEFGKRVHVDSIKL---NLNSDCFVGSSLIRLYSEY----------------------GK 90
L +G + VDS + L+ DC+ ++ I ++ E+ G+
Sbjct: 202 LNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR 261
Query: 91 LEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTL 146
+++AH + + K D+++Y++++ Y G + +++ M+ + L PN
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE--LDKVWKLIEVMKRKGLKPNSYIY 319
Query: 147 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
S++ ++ L E IR+G + D + TTL+D + K G ++ A+ F +M+
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 207 ATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 264
+ T V ++ +I+ + G +EA +LF +M + + PD +T I + ++
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 265 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLK 324
+H +MI+ G P++V T L+D K +
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCK-----------------------------E 469
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
DL A + HEM K+ + PN+ + ++++ + +I A + G
Sbjct: 470 GDLD-SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRLLQ 440
++ Y K G + A+ + M + L V++ ++ G+ HG +++ L +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 441 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ + ++ T SL++ L A ++ G + +L+ + K +
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 501 MARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 552
A +LFQ+M + +++++ ++ + + E ++F+ M+ + D+ F
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/573 (19%), Positives = 223/573 (38%), Gaps = 94/573 (16%)
Query: 70 NLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAY-AHSGGSCVYGAF 128
+ SD V ++ ++G L +A RVF+++ N LV Y C +
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC----Y 225
Query: 129 RIASTMQDQRLYP------NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE 182
+ A+ + R +P N + ++H +LG ++E +
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL----------------- 268
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
LL M ++ + V S++ ++ Y G+ + ++L M +
Sbjct: 269 --LLLM---------------ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 243 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKAR 301
+ P+ + I + L + MIR G+ PD V T L+D + K D+ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 302 KMFERLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
K F + ++D + Y +++G+ + VEA +FHEM + P+ F LI+
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 358 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDL 413
++ A +H ++++ V +I K G L A + + M ++
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 414 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 473
++ S++ G G+I+EA+ L + L D+VT +L+ A
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA---------------- 535
Query: 474 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGN 529
Y K G+++ A+ + ++M + L ++N ++ + +HG
Sbjct: 536 -------------------YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 530 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 589
+ KL N M I P+ TF S++ ++ I++ M + P Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYE 635
Query: 590 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 622
++ +A + EA+ L + M S ++ T
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 151/347 (43%), Gaps = 16/347 (4%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRL-EFGKRVHVDSIKLNLNSD 74
C+R + + ++ + + D T + +G + E GK H K L D
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPD 420
Query: 75 CFVGSSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGSCVYGAFRI 130
+ LI Y + G ++DA RV + + + ++V YT++I G + A +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD--LDSANEL 478
Query: 131 ASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYH 190
M L PN T S+++ K G+++E + G G D + TTL+D Y
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYC 537
Query: 191 KCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
K G + A + +M T+ ++N L+ + +G + +L M+ + + P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 249 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL 307
T + + + L +I+ M GV PD LV + K ++ +A +F+ +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 308 RNKDAVI----YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 350
+ K + Y+V++ G+LK +EA VF +M + ++ + +F
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 210/508 (41%), Gaps = 54/508 (10%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTL 185
A + M R P+ LL A AK+ ++ G ++R G+ ++ L
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL-GEKMQR-LGISHNLYTYNIL 126
Query: 186 LDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
++ + + + +A A+ GKM ++ + + L+ Y H + +A L QM+
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARK 302
PD +T I + ++ M++ G +P++V +V+ L + D+ A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 303 MFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+ ++ + VIY+ ++ K +A+N+F EM V PNV + +LIS +
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLV 414
+ A + ++ + V N +I + K G L A +++ M R D+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 415 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL----------------ISLLQAL 458
+++S+I G+ H +DEA +F L+ ++ + VT + L + +
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 459 SQLGCLSAVKEVHCLTYRAFHGKE-------------------LSVNNSLITTYAKCGKL 499
SQ G + L + F ++ + N+L+ K GKL
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 500 NMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 555
A +F+ + E + ++N M+ G + LF + L +KPD + + ++
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVP 583
++ GL EE +FR M RE +P
Sbjct: 547 ISGFCRKGLKEEADALFRKM-REDGPLP 573
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 9/251 (3%)
Query: 209 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 268
+ V ++N LI A++ G+ +EA +L+ +MI R + PD+ T ++ I D L K
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 269 IHGYMIRMGVEPDMVACTALVDLYSKFD-----VTKARKMFERLRNKDAVIYNVMMTGYL 323
+ MI P++V L++ + K V R+M +R + V Y ++ G+
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 324 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 383
+ A VF +M+ V PN+ + L+ + + A + Y+ R + +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 384 IANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLL 439
N +I K G ++ +F + + D++ + +MI+G+ G +EA LFR +
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 440 QRENLRIDSVT 450
+ + DS T
Sbjct: 567 REDGPLPDSGT 577
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 171/419 (40%), Gaps = 51/419 (12%)
Query: 207 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 266
A S+ G + ++ LH+ + +A LF M+ + LP + + + A++
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 267 KSIHGYMIRMGVEPDMVACTALVDLY---SKFDVTKA--RKMFERLRNKDAVIYNVMMTG 321
S+ M R+G+ ++ L++ + S+ + A KM + V + ++ G
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 322 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 381
Y +A+ + +M++M P+ F LI HG L ++
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLI---------------HGLFLHNKASEA 209
Query: 382 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ- 440
V + ++++ R +LV++ ++ G G ID A L ++
Sbjct: 210 VALVDRMVQ----------------RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 441 ---RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 497
N+ I S + SL + + L+ E+ R + +SLI+
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP----NVITYSSLISCLCNYE 309
Query: 498 KLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
+ + A L M ER + ++NA++ A+ G E KL++ M +I PD T++
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 554 SILTA-CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
S++ C H L +E +F MI + P V YN +I+ +A ++ E L + M
Sbjct: 370 SLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 215/516 (41%), Gaps = 37/516 (7%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
P+ VT +LLH + E A+ GY + GF A A
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGF---------------------LEAVA 212
Query: 201 VFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 258
+F +M T V ++N LI G+ LEA L +M+ + + D++T +
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 259 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK----DAV 313
++ ++ M ++PD+V +A++D L + A+ +F + K +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
YN M+ G+ +A + +MI+ ++P+V F LISA + A + +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 433
L N +I+ + K A+ +F+ M S D+V++ ++I Y +DE +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 434 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG--KELSVNNSLIT 491
L R + R L ++ T +L+ ++ L+A +++ HG + N L+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL--FQEMISHGVCPDTITCNILLY 510
Query: 492 TYAKCGKLNMARYLFQ--QMTERCL--TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 547
+ + KL A LF+ QM++ L ++N ++ E LF + + ++P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 607
D T+ +++ + + +F M ++ P YN +I +AG++ ++ L
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 608 VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 643
+ M S S T+ L D + ++ + +
Sbjct: 630 ISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 665
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 214/479 (44%), Gaps = 48/479 (10%)
Query: 211 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC-AELDYLCHGKSI 269
T N +I ++ + A L+R+M R++ ++ + N ++ C + L S
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF-NILIKCFCDCHKLSFSLST 163
Query: 270 HGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 329
G + ++G +PD+V L+ + +R+ A+ ++ TG+L
Sbjct: 164 FGKLTKLGFQPDVVTFNTLL---------HGLCLEDRISEALALFGYMVETGFL------ 208
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVS-DLRDIRLARSIHGYVLRHQYITRVEIANQI 388
EA+ +F +M+++ ++P V F LI+ + + R + A ++ V + +I V I
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT-I 267
Query: 389 IHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
++ K G + A + ++M D+V ++++I GH +A LF + + +
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 445 RIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+ T ++ G S A + + + R + L+ N+LI+ K GKL A
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF-NALISASVKEGKLFEAE 386
Query: 504 YLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
L +M RC+ ++N+M+ + H + + +F+ M PD +TF +I+
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 619
+ V+EG+Q+ R + R +V YN +I L A +L + M S
Sbjct: 443 CRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM----ISHG 497
Query: 620 LCTLLSACR--LYG---DTEIGEAI----AKQILKLEPRNSSSYVLISNILAEGGRWDE 669
+C C LYG + ++ EA+ Q+ K++ ++ +Y +I + + +G + DE
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID-LDTVAYNIIIHGMCKGSKVDE 555
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 149/352 (42%), Gaps = 40/352 (11%)
Query: 36 FSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAH 95
F+ +C C + GR +R+ D I+ +N D ++LI + GKL +A
Sbjct: 332 FTYNCMIDGFC-----SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 96 RVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLH 151
++ DE+ ++ D V Y S+I + C + F A M D P+ VT +++
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGF------CKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 152 AAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATS 209
+ + EG + RRG V + TL+ + + + A +F +M +
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 210 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 269
+ N L+ + N + EA ELF + K+ DL T+A I+ + +C G +
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAYNII----IHGMCKGSKV 553
Query: 270 HG------YMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNK----DAVIYNVM 318
+ GVEPD+ ++ + K ++ A +F ++++ D YN +
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 319 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL-RDIRLARSI 369
+ G LK ++I + EM S + I V+DL D RL +S
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAF----TIKMVADLITDGRLDKSF 661
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 105/202 (51%)
Query: 447 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 506
D + L ++ + L L K+VH ++ + +NN +I+ + +C + A+ +F
Sbjct: 235 DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVF 294
Query: 507 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 566
M ++ + SW+ M+ AY+ +G + L LF M +KP+E TF ++ AC+ G +E
Sbjct: 295 DHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
Query: 567 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
E F SM E+ I P HY ++ +L + G L EA ++ +P ++ + +
Sbjct: 355 EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNY 414
Query: 627 CRLYGDTEIGEAIAKQILKLEP 648
RL+GD ++ + + + ++ ++P
Sbjct: 415 ARLHGDIDLEDYMEELMVDVDP 436
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 11/248 (4%)
Query: 337 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 396
E++ P+ F+ L + ++L+ + ++ +H + L+ ++ ++ N +I + +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 397 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 456
+ A+ VF+ M +D+ SW M+ Y +G D+A+ LF + + L+ + T +++
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 457 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL--ITTYAKCGKLNMA-RYLFQQMTERC 513
A + +G + +H + + HG + L + KCG L A +Y+ E
Sbjct: 346 ACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 514 LTSWNAMLGAYAMHGNYAEVLKLFNHMK--LGNIKPDELTFTSILTACSHSGLVEEGLQI 571
W AM +HG+ + L ++M+ + ++ P + I T S E +
Sbjct: 405 ADFWEAMRNYARLHGD----IDLEDYMEELMVDVDPSKAVINKIPTPPPKS-FKETNMVT 459
Query: 572 FRSMIREY 579
+S I E+
Sbjct: 460 SKSRILEF 467
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-F 295
+++ + +PD SCA L L H K +H + ++ D ++ ++ +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 296 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
+T A+++F+ + +KD +++MM Y N + +A+++F EM K + PN FL +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 356 AVSDLRDIRLARSIHGYVLRHQY--ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 413
A + + I A +H +++++ + E ++ KCG+L A +
Sbjct: 346 ACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 414 VSWTSMITGYVH-HGHID 430
+ + Y HG ID
Sbjct: 405 ADFWEAMRNYARLHGDID 422
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 6 PSITGNLVASCRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVD 65
P ++ C+RR Y + + +L + D L +SC L LE K+VH
Sbjct: 206 PPSVEEVMRLCQRRLYKDAI----ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDH 261
Query: 66 SIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVY 125
++ D + + +I ++ E + DA RVFD + +KD+ ++ ++ AY+ +G
Sbjct: 262 FLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMG--D 319
Query: 126 GAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQE 161
A + M L PN T +++ A A +G ++E
Sbjct: 320 DALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEE 355
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 123 CVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE 182
C ++ A + D+ P+R V L + A L SL+ + +H + ++ F D
Sbjct: 216 CQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKF-RGDPKLN 274
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 242
++ M+ +C + A VF M + SW+ ++ AY NG +A LF +M
Sbjct: 275 NMVISMFGECSSITDAKRVFDHM--VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332
Query: 243 VLPDLLTLANAILSCA 258
+ P+ T L+CA
Sbjct: 333 LKPNEETFLTVFLACA 348
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
Query: 427 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 486
G + +A+ + + + E +D L + Q L K VH + ++S
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
NS+I Y+ CG + A +F M ER L +W ++ +A +G + + F+ K K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 606
PD F I AC G + EGL F SM +EY I+P HY ++ +L+ G L EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 607 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLE 647
V+SM + TL++ R++GD +G+ + +L+
Sbjct: 340 FVESMEP--NVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
D + ++ A+ +H ++ I+ + N II Y+ CG ++ A VFN M R+L +W
Sbjct: 193 DAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCG 252
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL--------SAVKE- 469
+I + +G ++AI F ++E + D + A LG + S KE
Sbjct: 253 VIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEY 312
Query: 470 --VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 527
+ C+ + SL+ A+ G L+ A + M E + W ++ +H
Sbjct: 313 GIIPCMEHYV----------SLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVH 361
Query: 528 GN 529
G+
Sbjct: 362 GD 363
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 165/370 (44%), Gaps = 25/370 (6%)
Query: 277 GVEPDMVACTALVDLYSKF-DVTKA----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 331
G P +V L++LY+K ++KA R M E + Y++M+ G++K A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 332 INVFHEMIKMSVSPNVALFLNLISAVSDL----RDIRLARSIHGYVLRHQYITRVEIANQ 387
VF +M+K + P+V L+ N+ISA + R I+ + + LRH+ TR +
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK--LRHRPTTRTFMP-- 594
Query: 388 IIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITGYVHHGHIDEAIILFRLLQREN 443
IIH YAK G ++ + VF+ MR V ++ +I G V +++A+ + +
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 444 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 503
+ + T ++Q + +G E ++ +L+ K G++ A
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 504 YLFQQMTERCLTS----WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 559
+ ++M+ R + +N ++ +A G+ E L MK +KPD T+TS ++AC
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 560 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA---YNLVKSMPSTHS 616
S +G + Q M + P Y +I +RA +A Y +K+M
Sbjct: 775 SKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 617 SAALCTLLSA 626
A LL++
Sbjct: 834 KAVYHCLLTS 843
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 196/484 (40%), Gaps = 55/484 (11%)
Query: 185 LLDMYHKCGGVKMAAAVFGKMNATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRK 242
++ Y + G + A F +M A T S + LI AY EA R+M
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 243 VLPDLLTL---------------ANAILSCAELDYLCHGKSIHGYMIRMGVEP-DMVACT 286
+ L+T A+ A+ + SI+G +I + +M
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 287 ALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 346
ALV R+M E + IY+ MM GY + + VF + + +P
Sbjct: 435 ALV-----------REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 347 VALF---LNLISAVSDL-RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 402
V + +NL + V + + + ++R + ++H T + +I+ + K A
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT----YSMMINGFVKLKDWANAF 539
Query: 403 LVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQAL 458
VF M D++ + ++I+ + G++D AI + +Q+ R + T + ++
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 459 SQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT--- 515
++ G + EV + R + N LI + ++ A + +MT ++
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANE 659
Query: 516 -SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 574
++ ++ YA G+ + + F ++ + D T+ ++L AC SG ++ L + +
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 575 MIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------PSTHSSAALCTLLSACR 628
M I YN +ID +R G + EA +L++ M P H+ + +SAC
Sbjct: 720 M-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT---YTSFISACS 775
Query: 629 LYGD 632
GD
Sbjct: 776 KAGD 779
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 74/285 (25%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNKDLVA----YTSIITAYAHSGGSCVYGAFRIASTM 134
+ LI E ++E A + DE+T + A YT I+ YA G + AF + +
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG--KAFEYFTRL 685
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
Q++ L + T +LL A K G +Q
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQS--------------------------------- 712
Query: 195 VKMAAAVFGKMNATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
A AV +M+A + S +N LI + G EA +L +QM V PD+ T +
Sbjct: 713 ---ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDA 312
I +C++ + M +GV+P++
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIKT---------------------------- 801
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 357
Y ++ G+ + LP +A++ + EM M + P+ A++ L++++
Sbjct: 802 --YTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 192/437 (43%), Gaps = 23/437 (5%)
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEIT----NKDLVAYTSIITAYAHSGGS 122
+++ D S+LI G++ +A + D + D V Y ++ SG S
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 123 CVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE 182
+ A + M+++ + + V ++ + K GS + ++ +G D +
Sbjct: 227 AL--ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA-DVVTY 283
Query: 183 TTLLDMYHKCG----GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
++L+ G G KM + G+ N V +++ LI ++ G+ LEA EL+ +M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVV-TFSALIDVFVKEGKLLEAKELYNEM 341
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-V 297
I R + PD +T + I + + L + M+ G EPD+V + L++ Y K V
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 298 TKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
++F + +K + + YN ++ G+ ++ A +F EM+ V P+V + L
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-- 411
+ + D ++ A I + + + + I N IIH + A +F + +
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 412 --DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA-LSQLGCLSAVK 468
D+V++ MI G G + EA +LFR ++ + D T L++A L G +S+V+
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 469 EVHCLTYRAFHGKELSV 485
+ + F ++
Sbjct: 582 LIEEMKVCGFSADSSTI 598
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 202/496 (40%), Gaps = 61/496 (12%)
Query: 183 TTLLDMYHKCGGVKMAAAVFG---KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 239
T +++ Y + + A +V G K+ T+ +++ L+ + G+ EA L +M+
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI-TFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 240 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----- 294
K PDL+T++ I + + M+ G +PD V +++ K
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 295 FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 354
+ RKM ER V Y++++ K+ +A+++F+EM + +V + +LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 355 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR--- 411
+ + + ++ I V + +I + K G L A+ ++N M +R
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 412 -DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 470
D +++ S+I G+ + EA +F L+ + D VT L+ + C + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY----CKAKRVDD 403
Query: 471 HCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTER----CLTSWNAMLG 522
+R K L N N+L+ + + GKLN A+ LFQ+M R + ++ +L
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 523 AYAMHGNYAEVLKLFNHMK-----LG------------------------------NIKP 547
+G + L++F M+ LG +KP
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 548 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 607
D +T+ ++ G + E +FR M +E P + YN +I L + L
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 608 VKSMPSTHSSAALCTL 623
++ M SA T+
Sbjct: 583 IEEMKVCGFSADSSTI 598
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 147/325 (45%), Gaps = 26/325 (8%)
Query: 54 GRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAY 109
G+ + G ++ + I N+ D S+LI ++ + GKL +A +++E+ + D + Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 110 TSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYA 169
S+I + +C++ A ++ M + P+ VT L+++ K + +G +
Sbjct: 354 NSLIDGFCKE--NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 170 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQ 227
+G + + I TL+ + + G + A +F +M +V ++ L+ NG+
Sbjct: 412 SSKGL-IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK------SIHGYMIRMGVEPD 281
+A E+F +M + +TL I + + +C+ S+ + GV+PD
Sbjct: 471 LNKALEIFEKMQKSR-----MTLGIGIYNII-IHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 282 MVACTALVD-LYSKFDVTKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFH 336
+V ++ L K +++A +F +++ D YN+++ +L + ++ +
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 337 EMIKMSVSPNVALFLNLISAVSDLR 361
EM S + + +I +SD R
Sbjct: 585 EMKVCGFSADSSTIKMVIDMLSDRR 609
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/518 (21%), Positives = 209/518 (40%), Gaps = 78/518 (15%)
Query: 105 DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA 164
D+V +S++ Y HS + A + M + P+ T +L+H E A
Sbjct: 152 DIVTLSSLLNGYCHSKR--ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 165 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT--STTVGSWNPLIAAY 222
+ ++RG D + T+++ K G + +A + KM A V +N +I +
Sbjct: 210 LVDQMVQRGCQP-DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 282
A +LF +M + + P+++T N++++C LC+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTY-NSLINC-----LCN----------------- 305
Query: 283 VACTALVDLYSKF-DVTKA-RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 340
Y ++ D ++ M E+ N + V +N ++ + K VEA + EMI+
Sbjct: 306 ---------YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 341 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 400
S+ P+ + LI+ + A+ + +++ + ++ N +I+ + KC ++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 401 ARLVFNRMRSRDLV----SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 456
+F M R LV ++T++I G+ G D A ++F+ + + D +T LL
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 457 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS 516
L G L L + +YL + E +
Sbjct: 477 GLCSYGKLDTA-------------------------------LVIFKYLQKSEMELNIFI 505
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 576
+N M+ G E LF + +IKPD +T+ ++++ L++E +FR M
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM- 561
Query: 577 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 614
+E +P YN +I R + L+K M S+
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 214/519 (41%), Gaps = 54/519 (10%)
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE- 182
V A + M R +P+ V LL A AK+ + I + G+ +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE--LVISLGEQMQTLGISHDLYTY 121
Query: 183 TTLLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 240
+ ++ + + + +A AV KM + + + L+ Y H+ + +A L QM+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 241 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTK 299
PD T I + ++ M++ G +PD+V +V+ L + D+
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 300 ARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 355
A + ++ + VI+N ++ K A+++F EM + PNV + +LI+
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 356 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR---- 411
+ + A + +L + V N +I + K G L A + M R
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 412 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
D +++ +I G+ H +DEA +F+ + ++ CL ++
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKD-------------------CLPNIQ--- 399
Query: 472 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMH 527
TY N+LI + KC ++ LF++M++R L ++ ++ +
Sbjct: 400 --TY-----------NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 528 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 587
G+ +F M + D +T++ +L G ++ L IF+ +++ +
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK-YLQKSEMELNIFI 505
Query: 588 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 626
YN +I+ + +AG++ EA++L S+ T++S
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/472 (19%), Positives = 195/472 (41%), Gaps = 55/472 (11%)
Query: 230 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 289
+A +LF M+ + P ++ + + A+++ S+ M +G+ D+ + +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 290 DLY---SKFDVTKA--RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 344
+ + S+ + A KM + D V + ++ GY + +A+ + +M++M
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 345 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 404
P+ F LI HG L ++ V + +Q++
Sbjct: 186 PDTFTFTTLI---------------HGLFLHNKASEAVALVDQMVQ-------------- 216
Query: 405 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL 464
R DLV++ +++ G G ID A+ L ++ ++ + V +++ +L C
Sbjct: 217 --RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL----CK 270
Query: 465 SAVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTERCLT----S 516
EV + K + N NSLI G+ + A L M E+ + +
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA-CSHSGLVEEGLQIFRSM 575
+NA++ A+ G E KL M +I PD +T+ ++ C H+ L +E Q+F+ M
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL-DEAKQMFKFM 389
Query: 576 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS---THSSAALCTLLSACRLYGD 632
+ + +P YN +I+ + ++ + L + M ++ T++ GD
Sbjct: 390 VSK-DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 633 TEIGEAIAKQILKLE-PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 683
+ + + KQ++ P + +Y ++ + L G+ D I + E++
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 25/304 (8%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEI----TNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
+SLI YG+ DA R+ + N ++V + ++I A+ G + A ++ M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK--LVEAEKLHEEM 354
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFET--TLLDMYHKC 192
+ + P+ +T L++ L E + + + + + C +T TL++ + KC
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD---CLPNIQTYNTLINGFCKC 411
Query: 193 GGVKMAAAVFGKMNA---TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 249
V+ +F +M+ TV ++ +I + G A +F+QM+ +V D++T
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTV-TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 250 ---LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFE 305
L + + S +LD I Y+ + +E ++ +++ K V +A +F
Sbjct: 471 YSILLHGLCSYGKLD---TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC 527
Query: 306 RLRNK-DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 364
L K D V YN M++G L EA ++F +M + PN + LI A +LRD
Sbjct: 528 SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA--NLRDCD 585
Query: 365 LARS 368
A S
Sbjct: 586 RAAS 589
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 14/327 (4%)
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
IYN+M+ + +++ +A +F EM K S P+ + LI+A R A ++ +
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHI 429
LR N +I+ G + A V +M DLV+ +++ Y
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV--HCLTYRAFHGKELSVNN 487
+A+ F L++ +R D+ T ++ LS+LG S ++ RA ++
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 488 SLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
S++ Y+ G++ R +F+ M L S+NA++GAYA+HG L + +K
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
I PD +++T +L + S + ++F M+R+ P V YN +ID G L E
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 604 AYNLVKSMPS---THSSAALCTLLSAC 627
A + + M + ++CTLL+AC
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 148/676 (21%), Positives = 275/676 (40%), Gaps = 122/676 (18%)
Query: 22 GEVLRRY-LDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVG-- 78
++ RRY + ++N +F D S ++ + +AL R E VD + LNS +VG
Sbjct: 57 ADIPRRYRIRVENDRFQKDWS-VSEVVDRLMALNRWE-----EVDGV---LNS--WVGRF 105
Query: 79 -----SSLIRLYSEYGKLEDAHRVFDEIT-NKDLVAYTSI--ITAYAHSGGSCVYGAFRI 130
LIR S G +E VF + K+ A I + H+ + V A +
Sbjct: 106 ARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGL 165
Query: 131 ASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYH 190
MQ P+ T +L++A + G + + +R + L++
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY-NNLINACG 224
Query: 191 KCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 248
G + A V KM N + + N +++AY Q +A F M KV PD
Sbjct: 225 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 284
Query: 249 TLANAILSC-AELDYLCHGKSIHGYM--IRMGVEPDMVACTALVDLYS-KFDVTKARKMF 304
T N I+ C ++L + M R PD+V T+++ LYS K ++ R +F
Sbjct: 285 TF-NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 305 ERL----RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL 360
E + + V YN +M Y + + A++V ++ + + P+V + L+++
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 361 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 420
R A+ + + + + R ++V++ ++I
Sbjct: 404 RQPGKAKEVFLMMRKER-------------------------------RKPNVVTYNALI 432
Query: 421 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY-RAFH 479
Y +G + EA+ +FR ++++ ++ + V++ +LL A C + K+V+ T A
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-----CSRSKKKVNVDTVLSAAQ 487
Query: 480 GKELSVN----NSLITTYAKCGKLNMARYLFQQMTER----------------CLTS--- 516
+ +++N NS I +Y +L A L+Q M ++ C S
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 547
Query: 517 --------------------WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
++++L AY+ G E +FN MK+ +PD + +TS+L
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV-----KSM 611
A + S + ++F M I P + + ++ ++ GQ + + L+ K +
Sbjct: 608 HAYNASEKWGKACELFLEM-EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Query: 612 PSTHSSAALCTLLSAC 627
P T A + SAC
Sbjct: 667 PFT--GAVFFEIFSAC 680
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 192/489 (39%), Gaps = 94/489 (19%)
Query: 8 ITGNLVASCRR--RHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRV--H 63
+T N+V S + R Y + L + +K +K D + + + LG+ +
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 308
Query: 64 VDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFD----EITNKDLVAYTSIITAYAHS 119
+ + D +S++ LYS G++E+ VF+ E ++V+Y +++ AYA
Sbjct: 309 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGY-AIRRGFGVCD 178
G S A + ++ + P+ V+ LL++ + S Q G+A + +R+ +
Sbjct: 369 GMSGT--ALSVLGDIKQNGIIPDVVSYTCLLNSYGR--SRQPGKAKEVFLMMRKERRKPN 424
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKM-------NATST--------------------- 210
+ L+D Y G + A +F +M N S
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484
Query: 211 ---------TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL----------- 250
++N I +Y++ + +A L++ M +KV D +T
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 251 --ANAILSCAELD-------------YLC---------HGKSIHGYMIRMGVEPDMVACT 286
AI E++ LC +SI M G EPD++A T
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 287 ALVDLYSKFD-VTKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
+++ Y+ + KA ++F + D++ + +M + K P + M +
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA--NQIIHTYAKCGYLQ 399
+ A+F + SA + L++ + R+I + Y+ + I NQ++H + K G ++
Sbjct: 665 EIPFTGAVFFEIFSACNTLQEWK--RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVE 722
Query: 400 YARLVFNRM 408
+F ++
Sbjct: 723 AMMKLFYKI 731
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 181/415 (43%), Gaps = 19/415 (4%)
Query: 73 SDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDL----VAYTSIITAYAHSGGSCVYGAF 128
D ++LI + ++GKL + E+ L V+Y++++ A+ G + A
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG--MMQQAI 387
Query: 129 RIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDM 188
+ M+ L PN T SL+ A K+G+L + + ++ G + + T L+D
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW-NVVTYTALIDG 446
Query: 189 YHKCGGVKMAAAVFGKMNATST--TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD 246
+K A +FGKM+ + S+N LI ++ A EL ++ R + PD
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 247 LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFE 305
LL I L+ + K + M G++ + + T L+D Y K + T+ + +
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 306 RLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDL 360
++ D V + V++ G KN L +A++ F+ + + N A+F +I +
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 361 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSW 416
+ A ++ +++ + ++ K G + A + ++M DL+++
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 417 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 471
TS++ G H + +A + E + D V IS+L+ +LGC+ E+
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQ 741
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/524 (20%), Positives = 223/524 (42%), Gaps = 51/524 (9%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEI----TNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
+ L+ +++ GK +D R F ++ + Y +I G V A + M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD--VEAARGLFEEM 288
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+ + L P+ VT S++ K+G L + ++ D I L++ + K G
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE-EMKDMCCEPDVITYNALINCFCKFGK 347
Query: 195 VKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
+ + + +M N V S++ L+ A+ G +A + + M ++P+ T +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNKD 311
I + ++ L + M+++GVE ++V TAL+D L + +A ++F ++
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 312 AVI----YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
+ YN ++ G++K A+ + +E+ + P++ L+ I + L
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE------ 521
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 427
++E A +++ +CG +++ L+ +T+++ Y G
Sbjct: 522 -------------KIEAAKVVMNEMKECG-----------IKANSLI-YTTLMDAYFKSG 556
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVN 486
+ E + L ++ ++ + VT L+ L + +S AV + ++ ++
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 487 NSLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKL 542
++I K ++ A LF+QM ++ L T++ +++ GN E L L + M
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 543 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 586
+K D L +TS++ SH +++ MI E I P EV
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE-GIHPDEV 719
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 191/488 (39%), Gaps = 55/488 (11%)
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT-----LLDMYHKCGGV 195
P +L LG L+E AI ++ + F +F T LL + K G
Sbjct: 190 PGFGVFDALFSVLIDLGMLEE--AIQCFSKMKRF----RVFPKTRSCNGLLHRFAKLGKT 243
Query: 196 KMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 253
F M TV ++N +I G A LF +M R ++PD +T +
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 254 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-----VTKARKMFERLR 308
I ++ L M M EPD++ AL++ + KF + R+M
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 309 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 368
+ V Y+ ++ + K + +AI + +M ++ + PN + +LI A + ++ A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 369 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMITGYV 424
+ +L+ V +I ++ A +F +M + +L S+ ++I G+V
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 484
++D A+ L L+ ++ D + + + L L + A K V KE
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV------MNEMKECG 537
Query: 485 VN-NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
+ NSLI T ++ AY GN E L L + MK
Sbjct: 538 IKANSLIYT--------------------------TLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
+I+ +TF ++ + LV + + F + ++ + + +ID L + Q+
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 604 AYNLVKSM 611
A L + M
Sbjct: 632 ATTLFEQM 639
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 176/427 (41%), Gaps = 62/427 (14%)
Query: 8 ITGNLVASCRRRHYGEV---LRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHV 64
IT N + +C + +G++ L Y ++K + + + + + + G ++ + +V
Sbjct: 333 ITYNALINCFCK-FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 65 DSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEI----TNKDLVAYTSIITAYAHSG 120
D ++ L + + +SLI + G L DA R+ +E+ ++V YT++I +
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA- 450
Query: 121 GSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQ---------EGRAIHGYAIR 171
+ A + M + PN + +L+H K ++ +GR I +
Sbjct: 451 -ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 172 RG---FGVC----------------------DEIFETTLLDMYHKCGGVKMAAAVFGKMN 206
G +G+C + + TTL+D Y K G + +M
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 207 A--TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 264
TV ++ LI N +A + F ++ + D ANA + A +D LC
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN-----DFGLQANAAIFTAMIDGLC 624
Query: 265 HGKSIHG------YMIRMGVEPDMVACTALVD-LYSKFDVTKA----RKMFERLRNKDAV 313
+ M++ G+ PD A T+L+D + + +V +A KM E D +
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
Y ++ G + +A + EMI + P+ L ++++ +L I A + Y+
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL 744
Query: 374 LRHQYIT 380
++HQ +T
Sbjct: 745 MKHQLLT 751
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 181/404 (44%), Gaps = 21/404 (5%)
Query: 214 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 273
S PL+ A L ++ + ++++MI RK+ P++ T I + + + + + M
Sbjct: 190 SCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM 249
Query: 274 IRMGVEPDMVACTALVDLYSKF----DVTKA----RKMFERLRNKDAVIYNVMMTGYLKN 325
G P++V+ L+D Y K + KA ++M E + + +N+++ G+ K+
Sbjct: 250 KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD 309
Query: 326 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 385
D ++ VF EM+ V PNV + +LI+ + + I A S+ ++ +
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 386 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM----ITGYVHHGHIDEAIILFRLLQR 441
N +I+ + K L+ A +F ++ + V T M I Y G ID+ L ++R
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 442 ENLRIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
E + D T L+ L + G + A K++ LT + +L + L+ Y + G+
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESR 487
Query: 501 MARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSI 555
A L ++M++ L ++N ++ Y GN + M K ++ + ++ +
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 556 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 599
L S G +E+ + M+ E +VP + Y + + + G
Sbjct: 548 LQGYSQKGKLEDANMLLNEML-EKGLVPNRITYEIVKEEMVDQG 590
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 171/394 (43%), Gaps = 48/394 (12%)
Query: 134 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 192
M +++ PN T +++A K G + + R + + +G + TL+D Y K
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDV--MEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 193 GG---VKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
GG + A AV +M N S + ++N LI + + + ++F++M+ + V P++
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 248 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERL 307
++ + I + S+ M+ GV+P+++
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT----------------------- 368
Query: 308 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 367
YN ++ G+ KND+ EA+++F + P ++ LI A L I
Sbjct: 369 -------YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 368 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR---DLVSWTSMITGYV 424
++ + R + V N +I + G ++ A+ +F+++ S+ DLV++ ++ GY
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYC 481
Query: 425 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 484
G +A +L + + + L+ +T +++ + G L A + + + L
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE---RRLR 538
Query: 485 VN----NSLITTYAKCGKLNMARYLFQQMTERCL 514
+N N L+ Y++ GKL A L +M E+ L
Sbjct: 539 MNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 151/382 (39%), Gaps = 53/382 (13%)
Query: 318 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 377
+M LK + + V+ EMI+ + PNV F +I+A+ + AR + + +
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 378 YITRVEIANQIIHTYAKCG---YLQYARLVFNRMRSRD----LVSWTSMITGYVHHGHID 430
V N +I Y K G + A V M D L ++ +I G+ ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 431 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 490
++ +F+ + ++++ + ++ SL+ L G +S
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA----------------------- 350
Query: 491 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 550
++M + + L ++NA++ + + E L +F +K P
Sbjct: 351 --------ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 551 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 610
+ ++ A G +++G + M RE IVP YNC+I L R G + A L
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 611 MPSTHSSAALCTLLSA-------CRLYGDTEIGEAIAKQILK--LEPRNSSSYVLISNIL 661
+ +S L L++ CR G++ + K++ K L+PR+ + +++
Sbjct: 462 L----TSKGLPDLVTFHILMEGYCR-KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 662 AEGGRWDEVAHIRAMTKDKELK 683
EG M K++ L+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLR 538
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 215/527 (40%), Gaps = 89/527 (16%)
Query: 89 GKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYG----AFRIASTMQDQRLY 140
GK+E+A +F E+T K D++ YT++I GG C+ G AF + M
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLI------GGCCLQGKCSDAFDLMIEMDGTGKT 463
Query: 141 PNRVTLVSLLHAAAKLGSLQEG----RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 196
P+ V L A G QE + + ++ + + + E L+D G +
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE-GLID----AGELD 518
Query: 197 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 256
A A + + S + ++ + G AFE F ++ LP +
Sbjct: 519 KAEAFYESLEHKSRENDA--SMVKGFCAAGCLDHAFERFIRL--EFPLPKSVYFTLFTSL 574
Query: 257 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK----D 311
CAE DY+ + + M ++GVEP+ L+ + + +V KAR+ FE L K D
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 312 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 371
Y +M+ Y + + P +A +F +M + V P+V + L+++ +L + R +
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL---DMKREMEA 691
Query: 372 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 431
+ +I D+V +T MI Y H + +
Sbjct: 692 F--------------DVIP---------------------DVVYYTIMINRYCHLNDLKK 716
Query: 432 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNSLI 490
LF+ ++R + D VT LL+ + +K AF K ++ LI
Sbjct: 717 VYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMK--------AFDVKPDVFYYTVLI 768
Query: 491 TTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 546
K G L A+ +F QM E + + A++ G E +F+ M +K
Sbjct: 769 DWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVK 828
Query: 547 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE-----VHY 588
PD + +T+++ C +G V + +++ + M+ E I P + VHY
Sbjct: 829 PDVVPYTALIAGCCRNGFVLKAVKLVKEML-EKGIKPTKASLSAVHY 874
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 401 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL-ISLLQALS 459
+RL+ + R+ V + + I G + D A L + L+ N+ +D L I+ + +
Sbjct: 241 SRLLISETRN-PCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVR 299
Query: 460 QLGCLSAVKEVHCLTYR-AFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMTER---- 512
L +++ + HG ++ V +++I + K + A +F +M ++
Sbjct: 300 GLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRI 359
Query: 513 -CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 571
C+ +++L Y GN++E LF + NI D + + A G VEE +++
Sbjct: 360 NCVIV-SSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 572 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
FR M + I P ++Y +I G+ ++A++L+ M T + +
Sbjct: 419 FREMTGK-GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI 466
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 14/327 (4%)
Query: 314 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 373
IYN+M+ + +++ +A +F EM K S P+ + LI+A R A ++ +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 374 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHI 429
LR N +I+ G + A V +M DLV+ +++ Y
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 430 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV--HCLTYRAFHGKELSVNN 487
+A+ F L++ +R D+ T ++ LS+LG S ++ RA ++
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 488 SLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
S++ Y+ G++ R +F+ M L S+NA++GAYA+HG L + +K
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
I PD +++T +L + S + ++F M+R+ P V YN +ID G L E
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 604 AYNLVKSMPS---THSSAALCTLLSAC 627
A + + M + ++CTLL+AC
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 221/517 (42%), Gaps = 76/517 (14%)
Query: 177 CDEIFET--TLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAF 232
C ET L++ + + G + A + M A + + ++N LI A +G EA
Sbjct: 42 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 101
Query: 233 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVD 290
E+ ++M V PDL+T N +LS A + K++ + + G V PD ++
Sbjct: 102 EVCKKMTDNGVGPDLVT-HNIVLS-AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 159
Query: 291 LYSKF-DVTKARKMFERLRNK------DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 343
SK ++A +F +R K D V + +M Y VF M+ +
Sbjct: 160 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 219
Query: 344 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 403
PN+ + L+ A + A S+ G + ++ I V ++++Y + A+
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 404 VFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 459
VF MR ++V++ ++I Y +G + EA+ +FR ++++ ++ + V++ +LL A
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-- 337
Query: 460 QLGCLSAVKEVHCLTY-RAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTER-- 512
C + K+V+ T A + +++N NS I +Y +L A L+Q M ++
Sbjct: 338 ---CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 513 --------------CLTS-----------------------WNAMLGAYAMHGNYAEVLK 535
C S ++++L AY+ G E
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 536 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 595
+FN MK+ +PD + +TS+L A + S + ++F M I P + + ++
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM-EANGIEPDSIACSALMRAF 513
Query: 596 SRAGQLTEAYNLV-----KSMPSTHSSAALCTLLSAC 627
++ GQ + + L+ K +P T A + SAC
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFT--GAVFFEIFSAC 548
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 181/476 (38%), Gaps = 83/476 (17%)
Query: 170 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQ 227
I++ + ++I+ ++ ++ + V A +F +M S +++ LI A+ GQ
Sbjct: 3 IQKNYCARNDIY-NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQ 61
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
A L M+ + P T N I +C + M GV PD+V
Sbjct: 62 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVT--- 118
Query: 288 LVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 347
+N++++ Y +A++ F M V P+
Sbjct: 119 ---------------------------HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 151
Query: 348 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN--QIIHTYAKCGYLQYARLVF 405
F +I +S L A + + + R ++ I+H Y+ G ++ R VF
Sbjct: 152 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 211
Query: 406 NRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 461
M + ++VS+ +++ Y HG S T +S+L + Q
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGM-------------------SGTALSVLGDIKQN 252
Query: 462 GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TER---CLTSW 517
G + V CL + +Y + + A+ +F M ER + ++
Sbjct: 253 GIIPDVVSYTCL----------------LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 518 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 577
NA++ AY +G AE +++F M+ IKP+ ++ ++L ACS S + + S +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK-KKVNVDTVLSAAQ 355
Query: 578 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL----SACRL 629
I YN I A +L +A L +SM A T +CR+
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 192/489 (39%), Gaps = 94/489 (19%)
Query: 8 ITGNLVASCRR--RHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRV--H 63
+T N+V S + R Y + L + +K +K D + + + LG+ +
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 176
Query: 64 VDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFD----EITNKDLVAYTSIITAYAHS 119
+ + D +S++ LYS G++E+ VF+ E ++V+Y +++ AYA
Sbjct: 177 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 120 GGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGY-AIRRGFGVCD 178
G S A + ++ + P+ V+ LL++ + S Q G+A + +R+ +
Sbjct: 237 GMSGT--ALSVLGDIKQNGIIPDVVSYTCLLNSYGR--SRQPGKAKEVFLMMRKERRKPN 292
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKM-------NATST--------------------- 210
+ L+D Y G + A +F +M N S
Sbjct: 293 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 352
Query: 211 ---------TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL----------- 250
++N I +Y++ + +A L++ M +KV D +T
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 251 --ANAILSCAELD-------------YLC---------HGKSIHGYMIRMGVEPDMVACT 286
AI E++ LC +SI M G EPD++A T
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 287 ALVDLYSKFD-VTKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 341
+++ Y+ + KA ++F + D++ + +M + K P + M +
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA--NQIIHTYAKCGYLQ 399
+ A+F + SA + L++ + R+I + Y+ + I NQ++H + K G ++
Sbjct: 533 EIPFTGAVFFEIFSACNTLQEWK--RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVE 590
Query: 400 YARLVFNRM 408
+F ++
Sbjct: 591 AMMKLFYKI 599
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 166/358 (46%), Gaps = 25/358 (6%)
Query: 273 MIRMGVEPDMVACTALVDLYSK-----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 327
M +G PD+ A +DL + F V M +R R D V Y +++ G +
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 328 PVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA-N 386
+A+ +++ MI+ VSP+ L+ + R + LA + ++ + + N
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 387 QIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 442
+I + K G ++ A + + M DLV++ ++ Y + + A + + R
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 443 NLRIDSVTLISLLQALSQLG----CLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 497
+++D+ + LL+ ++ C + VKE+ R F ++ ++LI T+ +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP---RGFC--DVVSYSTLIETFCRAS 339
Query: 498 KLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 553
A LF++M ++ + ++ +++ A+ GN + KL + M + PD + +T
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 554 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
+IL SG V++ +F MI E+ I P + YN +I L R+G++TEA L + M
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMI-EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 148/340 (43%), Gaps = 14/340 (4%)
Query: 231 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV- 289
A + F M+ R PD+++ I + I MIR GV PD AC ALV
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 290 DLYSKFDVTKARKMF-ERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 344
L V A +M E +++ V+YN +++G+ K +A + M K+
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 345 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RL 403
P++ + L++ D ++ A + ++R NQ++ + + +
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Query: 404 VFNRMRSR---DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
+ M R D+VS++++I + + +A LF ++++ + ++ VT SL++A +
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----S 516
G S K++ + +++ K G ++ A +F M E +T S
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
+N+++ G E +KLF MK PDELTF I+
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 136/640 (21%), Positives = 253/640 (39%), Gaps = 46/640 (7%)
Query: 16 CRRRHYGEVLRRYLDLKNSKFSLDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDC 75
CR + L LK+ +F S +++ + RL+ +H + NL D
Sbjct: 211 CRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG 270
Query: 76 FVGSSLIRLYSEYGKLEDAHRVFD-EITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
F + GK +A + + E D V YT +I+ + S A + M
Sbjct: 271 FTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA--SLFEEAMDFLNRM 328
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 194
+ PN VT +LL L + + + G +IF +L+ Y G
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF-NSLVHAYCTSGD 387
Query: 195 VKMAAAVFGKMNATSTTVG--SWNPLIAAYLHNGQALE------AFELFRQMIHRKVLPD 246
A + KM G +N LI + + +L A + + +M+ V+ +
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447
Query: 247 LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFE 305
+ +++ S+ MI G PD + +++ L + + A +FE
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 306 RLRN----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 361
++ D Y +M+ + K L +A F+EM ++ +PNV + LI A +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 362 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSRD-------- 412
+ A + +L + + + +I + K G ++ A +F RM S+D
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627
Query: 413 -----------LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 461
+V++ +++ G+ ++EA L + E + + +L+ L ++
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 462 GCLSAVKEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS--- 516
G L +EV T + HG L +SLI Y K + ++A + +M E
Sbjct: 688 GKLDEAQEVK--TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745
Query: 517 -WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 575
+ M+ G E KL M+ +P+ +T+T+++ G +E L++ M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 576 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 615
+ + P V Y +ID + G L A+NL++ M TH
Sbjct: 806 GSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 117/553 (21%), Positives = 217/553 (39%), Gaps = 85/553 (15%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLL 186
AF + M Q P+ T +L+ ++ + ++RG V D T ++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE-EMKRGGLVADVYTYTIMV 525
Query: 187 DMYHKCGGVKMAAAVFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL 244
D + K G ++ A F +M T V ++ LI AYL + A ELF M+ L
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 245 PDLLTLANAI----------LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 294
P+++T + I +C + +C K + PD VD+Y K
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV----------PD-------VDMYFK 628
Query: 295 -FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 353
+D R + V Y ++ G+ K+ EA + M PN ++ L
Sbjct: 629 QYDDNSERP--------NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 354 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR---- 409
I + + + A+ + + H + + + +I Y K A V ++M
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 410 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG----CLS 465
+ ++V +T MI G G DEA L ++++ + + + VT +++ +G CL
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 466 AVKEV-------HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWN 518
++ + + +TYR LI K G L++A L ++M + T W
Sbjct: 801 LLERMGSKGVAPNYVTYRV-----------LIDHCCKNGALDVAHNLLEEMKQ---THWP 846
Query: 519 AMLGAY-----AMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
Y + + E L L + + + P + ++ + +E L++
Sbjct: 847 THTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 574 SMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------PSTHSSAALCTLLSA 626
+ T+V YN +I+ L A ++ A+ L M P S C+L+
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS---FCSLIKG 963
Query: 627 CRLYGDTEIGEAI 639
L+ +++I EA+
Sbjct: 964 --LFRNSKISEAL 974
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 129/604 (21%), Positives = 230/604 (38%), Gaps = 87/604 (14%)
Query: 123 CVYGAFRIA----STMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH---GYAIRRGFG 175
C G+F IA ++D R P+R T L+ A K L IH A R G
Sbjct: 211 CRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG 270
Query: 176 VCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF 235
F +L K G + A + N TV + LI+ EA +
Sbjct: 271 FTLRCFAYSLC----KVGKWREALTLVETENFVPDTV-FYTKLISGLCEASLFEEAMDFL 325
Query: 236 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SK 294
+M LP+++T + + C L K + M+ G P +LV Y +
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385
Query: 295 FDVTKARKMFERLRN----KDAVIYNVMMTGY------LKNDLPVEAINVFHEMIKMSVS 344
D + A K+ +++ V+YN+++ L DL A + EM+ V
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 345 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 404
N + + A S+ ++ +I +++++ ++ A L+
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 405 FNRMRSRDLV----SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 460
F M+ LV ++T M+ + G I++A F + +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF-------------------NEMRE 546
Query: 461 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCL---TS 516
+GC V +TY A LI Y K K++ A LF+ M +E CL +
Sbjct: 547 VGCTPNV-----VTYTA-----------LIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Query: 517 WNAMLGAYAMHGNYAEVLKLFNHM----------------KLGNIKPDELTFTSILTACS 560
++A++ + G + ++F M + +P+ +T+ ++L
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 561 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 620
S VEE ++ +M E P ++ Y+ +ID L + G+L EA + M A L
Sbjct: 651 KSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 621 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEG----GRWDEVAHIRAM 676
T S Y + + +K + K+ + + V+I + +G G+ DE + M
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769
Query: 677 TKDK 680
++K
Sbjct: 770 MEEK 773
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 198/517 (38%), Gaps = 59/517 (11%)
Query: 38 LDCSAITLCLKSCVALGRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRV 97
++ S+ T CL C A G+ E V + I D S ++ K+E A +
Sbjct: 449 INVSSFTRCL--CSA-GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 98 FDEITNKDLVA----YTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAA 153
F+E+ LVA YT ++ ++ +G + A + + M++ PN VT +L+HA
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAG--LIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 154 AKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM-------- 205
K + + + G + + + + L+D + K G V+ A +F +M
Sbjct: 564 LKAKKVSYANELFETMLSEG-CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 206 ----------NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 255
N+ V ++ L+ + + + EA +L M P+ + I
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 256 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF---DVTKA--RKMFERLRNK 310
++ L + + M G + ++L+D Y K D+ KM E
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR----LA 366
+ VIY M+ G K EA + M + PNV + +I + I L
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 367 RSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY-- 423
+ + Y+T RV +I K G L A + M+ W + GY
Sbjct: 803 ERMGSKGVAPNYVTYRV-----LIDHCCKNGALDVAHNLLEEMKQ---THWPTHTAGYRK 854
Query: 424 VHHGHIDEAIILFRLLQRENLRIDSVTLIS--------LLQALSQLGCLSAVKEVHCLTY 475
V G E I LL E + D+ +S L++A L ++EV T+
Sbjct: 855 VIEGFNKEFIESLGLLD-EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA--TF 911
Query: 476 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 512
A S NSLI + K+ A LF +MT++
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/548 (19%), Positives = 233/548 (42%), Gaps = 50/548 (9%)
Query: 79 SSLIRLYSEYGKLEDAHRVFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTM 134
+S+I + G ++DA R+ DE+ + ++VA TS+IT H + + A + M
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITG--HCKNNDLVSALVLFDKM 365
Query: 135 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFET-TLLDMYHKCG 193
+ + PN VT L+ K G ++ +A+ Y G+ +F T++ + K
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEME--KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQ 423
Query: 194 GVKMAAAVFGKMNATS-TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 252
+ A +F + T V N +++ G+ EA EL +M R + P++++ N
Sbjct: 424 KHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 253 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDA 312
+L + + + ++ G++P+
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPN------------------------------N 513
Query: 313 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 372
Y++++ G +N A+ V + M ++ N ++ +I+ + + AR +
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 573
Query: 373 VLRHQYITRVEIA-NQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTSMITGYVHHG 427
++ + + ++ N II + K G + A + M S +++++TS++ G +
Sbjct: 574 MIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNN 633
Query: 428 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 487
+D+A+ + ++ + +++D +L+ + + + + + N
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 488 SLITTYAKCGKLNMARYLFQQMTE---RC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 543
SLI+ + G + A L+++M + RC L ++ ++ GN +L+ M+
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 544 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 603
+ PDE+ +T I+ S G + +++F M ++ + P + YN +I R G L E
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM-KKNNVTPNVLIYNAVIAGHYREGNLDE 812
Query: 604 AYNLVKSM 611
A+ L M
Sbjct: 813 AFRLHDEM 820
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/552 (20%), Positives = 224/552 (40%), Gaps = 96/552 (17%)
Query: 197 MAAAVFGKMNATSTTVG------SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 250
MA+ + K+ ++ + G ++N L+ AY + Q A ++ QM+ V+P +
Sbjct: 142 MASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYV 201
Query: 251 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNK 310
+ + + + L K ++ M+ +GV+
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVD------------------------------G 231
Query: 311 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 370
D V ++M L+ + P EA+ V I+ P+ L+ + A D+ +A S+
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL- 290
Query: 371 GYVLRHQYITRVEIANQ-----IIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 421
LR ++ + +Q +I K G + A + + M S ++V+ TS+IT
Sbjct: 291 ---LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLIT 347
Query: 422 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ----------------LGCLS 465
G+ + + A++LF +++E +SVT L++ + LG
Sbjct: 348 GHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
Query: 466 AVKEVHCLTYRAFHGKE------------------LSVNNSLITTYAKCGKLNMARYLFQ 507
+V VH + G++ + V N++++ K GK + A L
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLS 467
Query: 508 QMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 563
+M R + S+N ++ + N +F+++ +KP+ T++ ++ C +
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 564 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 623
+ L++ M V G V Y II+ L + GQ ++A L+ +M C
Sbjct: 528 DEQNALEVVNHMTSSNIEVNG-VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 624 LSAC--RLYGDTEIGEAIA--KQIL--KLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 677
++ + + E+ A+A +++ + P N +Y + N L + R D+ +R
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISP-NVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 678 KDKELK-STPGY 688
K+K +K P Y
Sbjct: 646 KNKGVKLDIPAY 657
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 11/268 (4%)
Query: 107 VAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH 166
++Y SII + G + A M + PN +T SL++ K + + +
Sbjct: 585 MSYNSIIDGFFKEGE--MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLH 224
+G + D L+D + K ++ A+A+F ++ + + +N LI+ + +
Sbjct: 643 DEMKNKGVKL-DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
G + A +L+++M+ + DL T I + L ++ M +G+ PD +
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 285 CTALVD-LYSKFDVTKARKMFERLRNKDA----VIYNVMMTGYLKNDLPVEAINVFHEMI 339
T +V+ L K K KMFE ++ + +IYN ++ G+ + EA + EM+
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 340 KMSVSPNVALFLNLISA-VSDLRDIRLA 366
+ P+ A F L+S V +L+ +R A
Sbjct: 822 DKGILPDGATFDILVSGQVGNLQPVRAA 849
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 199/469 (42%), Gaps = 45/469 (9%)
Query: 127 AFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTL 185
A + M + P+ V LL A AKL + I + G+ +++ TTL
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEA--VISLFRHLEMLGISHDLYSFTTL 120
Query: 186 LDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 243
+D + +C + +A + GKM ++ ++ L+ + H + EA L Q++
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 244 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD--LYSKFDVTKAR 301
P+++ I S E + + +M +MG+ PD+V +L+ +S AR
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 302 KMFERLR---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 358
+ + +R + D + ++ ++ Y K +EA ++EMI+ SV+PN+ + +LI+ +
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL- 299
Query: 359 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 418
IHG ++ A ++++ G+ A V++ +
Sbjct: 300 ---------CIHGL---------LDEAKKVLNVLVSKGFFPNA------------VTYNT 329
Query: 419 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 478
+I GY +D+ + + ++ R+ + D+ T +L Q Q G SA ++V
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 479 HGKELSVNNSLITTYAKCGKLNMARYLFQQM----TERCLTSWNAMLGAYAMHGNYAEVL 534
++ N L+ GK+ A + + T + ++N ++ +
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 535 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 583
LF + L + PD +T+ +++ L E +++R M +E ++P
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 190/420 (45%), Gaps = 22/420 (5%)
Query: 223 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 282
LH+ + +A LF M LP ++ + +++ A+L+ S+ ++ +G+ D+
Sbjct: 55 LHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDL 114
Query: 283 VACTALVDLYSK-----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 337
+ T L+D + + ++ KM + V + ++ G+ + EA+++ +
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 338 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV----LRHQYITRVEIANQIIHTYA 393
++ + PNV ++ +I ++ + + A + ++ +R +T + ++ H+
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 394 KCGYLQYARLVFNRMR---SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVT 450
+ AR++ + MR S D+++++++I Y G + EA + + + ++ + VT
Sbjct: 235 ---WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT 291
Query: 451 LISLLQALSQLGCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 509
SL+ L G L K+V + L + F ++ N+LI Y K +++ + M
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY-NTLINGYCKAKRVDDGMKILCVM 350
Query: 510 TERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 565
+ + ++N + Y G ++ K+ M + PD TF +L G +
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 566 EEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLS 625
+ L + + T+V G + YN II L +A ++ +A+ L S+ S + T ++
Sbjct: 411 GKALVRLEDLQKSKTVV-GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 129/329 (39%), Gaps = 38/329 (11%)
Query: 64 VDSI-KLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITN----KDLVAYTSIITAYAH 118
VD I L + + +++I E G++ A V + D+V Y S+IT H
Sbjct: 172 VDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231
Query: 119 SGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF---- 174
SG V + RI S M + P+ +T +L+ K G L E + + I+R
Sbjct: 232 SGTWGV--SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 175 --------GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG 226
G+C LLD K V ++ F NA ++N LI Y
Sbjct: 290 VTYNSLINGLCIH----GLLDEAKKVLNVLVSKGFFP--NAV-----TYNTLINGYCKAK 338
Query: 227 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT 286
+ + ++ M V D T + + + G M+ GV PDM
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398
Query: 287 ALVD-LYSKFDVTKARKMFERLRNKDAVI----YNVMMTGYLKNDLPVEAINVFHEMIKM 341
L+D L + KA E L+ V+ YN+++ G K D +A +F +
Sbjct: 399 ILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALK 458
Query: 342 SVSPNVALFLNLISAVSDLRDIRLARSIH 370
VSP+V ++ ++ LR RL R H
Sbjct: 459 GVSPDVITYITMMIG---LRRKRLWREAH 484
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 146/353 (41%), Gaps = 26/353 (7%)
Query: 111 SIITAYAHSGGSCVYGAFRIASTMQDQRL----YPNRVTLVSLLHAAAKLGSLQEGRAIH 166
SI+T + G C F A ++ DQ + PN V +++ + + G + +
Sbjct: 148 SIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVL 207
Query: 167 GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLH 224
+ + G + + + ++H G ++A + M S V +++ LI Y
Sbjct: 208 KHMKKMGIRPDVVTYNSLITRLFHS-GTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266
Query: 225 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 284
GQ LEA + + +MI R V P+++T + I L K + ++ G P+ V
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 285 CTALVDLYSKFDVTKARKMFERLR----------NKDAVIYNVMMTGYLKNDLPVEAINV 334
L++ Y KA+++ + ++ + D YN + GY + A V
Sbjct: 327 YNTLINGY-----CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 335 FHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK 394
M+ V P++ F L+ + D I A + + + + + N II K
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 395 CGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 443
++ A +F + S D++++ +M+ G EA L+R +Q+E+
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/521 (20%), Positives = 213/521 (40%), Gaps = 65/521 (12%)
Query: 67 IKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYG 126
IKL D S+LI G++ +A + D + ++ ++IT A G C+ G
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV--EMGHKPTLITLNALVNGLCLNG 191
Query: 127 ----AFRIASTMQDQRLYPNRVTLVSLLHAAAKLG----SLQEGRAIHGYAIRRGFGVCD 178
A + M + PN VT +L K G +++ R + I+ D
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK-----LD 246
Query: 179 EIFETTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFR 236
+ + ++D K G + A +F +M + + LI + + G+ + +L R
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 237 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 296
MI RK+ PD++ + I + L + +H MI+ G+ PD V T+L+D + K +
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 297 -VTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
+ KA M + + +K + +N+++ GY K +L + + +F +M V + +
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY- 425
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
N +I + + G L+ A+ +F M SR
Sbjct: 426 ----------------------------------NTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 412 ----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
D+VS+ ++ G +G ++A+ +F +++ + +D ++ + +
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 468 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGA 523
++ C ++ N +I K G L+ A LF++M E + ++N ++ A
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 524 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 564
+ G+ + KL +K D T ++ S L
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 197/460 (42%), Gaps = 42/460 (9%)
Query: 191 KCGGVKMAAAVFGK---MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 247
+C + +A + GK + TV +++ LI G+ EA EL +M+ P L
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTV-TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 248 LTLANAILSCAELDYLC-HGKSIHGY-----MIRMGVEPDMVACTALVDLYSKFDVTKA- 300
+TL NA++ + LC +GK M+ G +P+ V ++ + K T
Sbjct: 178 ITL-NALV-----NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 301 ----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 356
RKM ER DAV Y++++ G K+ A N+F+EM ++ ++ LI
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 357 VSDLRDIRLARSIHGYVLRHQYITR-----VEIANQIIHTYAKCGYLQYARLVFNRMRSR 411
R G L I R V + +I + K G L+ A + M R
Sbjct: 292 FC-----YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 412 ----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 467
D V++TS+I G+ +D+A + L+ + + T L+ + +
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 468 KEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER----CLTSWNAMLG 522
E+ ++ R ++ N +LI + + GKL +A+ LFQ+M R + S+ +L
Sbjct: 407 LELFRKMSLRGVVADTVTYN-TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
+G + L++F ++ ++ D + I+ ++ V++ +F S+ + +
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVK 524
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 622
P YN +I L + G L+EA L + M S CT
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 19/295 (6%)
Query: 330 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD----IRLARSIHGYVLRHQYITRVEIA 385
+A+++F EM + P + F L S V+ + + L + + + H T
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT----L 110
Query: 386 NQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 441
+ +I+ +C L A ++ D V+++++I G G + EA+ L +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 442 ENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 500
+ +TL +L+ L G +S AV + + F E++ ++ K G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG-PVLKVMCKSGQTA 229
Query: 501 MARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 556
+A L ++M ER + ++ ++ G+ LFN M++ K D + +T+++
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 557 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
++G ++G ++ R MI+ I P V ++ +ID + G+L EA L K M
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 135/319 (42%), Gaps = 14/319 (4%)
Query: 54 GRLEFGKRVHVDSIKLNLNSDCFVGSSLIRLYSEYGKLEDAHRVFDEITNK----DLVAY 109
GR + G ++ D IK + D S+LI + + GKL +A + E+ + D V Y
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 110 TSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYA 169
TS+I + + A + M + PN T L++ K + +G +
Sbjct: 356 TSLIDGFCKENQ--LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 170 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA--TSTTVGSWNPLIAAYLHNGQ 227
RG V D + TL+ + + G +++A +F +M + + S+ L+ NG+
Sbjct: 414 SLRGV-VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 228 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 287
+A E+F ++ K+ D+ I + + + GV+PD+
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 288 LVD-LYSKFDVTKA----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 342
++ L K +++A RKM E + + YN+++ +L ++ + E+ +
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 343 VSPNVALFLNLISAVSDLR 361
S + + ++ +SD R
Sbjct: 593 FSVDASTVKMVVDMLSDGR 611
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 180/398 (45%), Gaps = 24/398 (6%)
Query: 232 FELFRQMIHRKVLPDLLTLANAILS-CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 290
E+FR+M+ V + +L + C + K I + ++ G++P+ +++
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK-GIKPEAYTYNTIIN 267
Query: 291 LYSKFDVTKARKMFERLRNKDAVIYN-----VMMTGYLKNDLPVEAINVFHEMIKMSVSP 345
Y K + ++ KD V+YN ++M +KN +A +F EM + +
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 346 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 405
+V ++ +LIS +++ A + + +I K G + A ++
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 406 NRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 461
N M+S+ + V + ++I GY G +DEA +++ +++++ + D T ++ ++L
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 462 GCLSAVKEVHCLTYRAFHG----KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT-- 515
K+ +R G +S N LI Y K G + A+ LF +M+ + +
Sbjct: 448 KRYDEAKQ---WLFRMMEGGVKLSTVSYTN-LIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 516 --SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 573
++N M+ AY G E KL +M+ + PD T+TS++ + V+E +++F
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 574 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
M + + V Y +I LS+AG+ EA+ L M
Sbjct: 564 EMGLK-GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 196/494 (39%), Gaps = 117/494 (23%)
Query: 12 LVASCRRRHYG---EVLRRYLD--LKNSKFSLDCSAITLCLKSCVALGR---LEFG-KRV 62
LVA+ +RR E+ RR +D +K + +SL LC + V + EF K +
Sbjct: 196 LVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGI 255
Query: 63 HVDSIKLNLNSDCFVGSS--------------------------LIRLYSEYGKLEDAHR 96
++ N + +V L+ L + GK+ DA +
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 97 VFDEITNK----DLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLYPNRVTLVSLLHA 152
+FDE+ + D+ YTS+I+ G + AF + + ++ L P+ T +L+
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGN--MKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 153 AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 212
K+G + G A E + +M K GV + VF
Sbjct: 374 VCKVGEM--GAA-----------------EILMNEMQSK--GVNITQVVF---------- 402
Query: 213 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY 272
N LI Y G EA ++ M + D+ T N I SC + L +
Sbjct: 403 ---NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT-CNTIASC--FNRLKRYDEAKQW 456
Query: 273 MIRM---GVEPDMVACTALVDLYSK-FDVTKARKMFERLRNK----DAVIYNVMMTGYLK 324
+ RM GV+ V+ T L+D+Y K +V +A+++F + +K +A+ YNVM+ Y K
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 325 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 384
EA + M + P+ + +L IHG +
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSL---------------IHGECIADN------- 554
Query: 385 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 444
++ + +++ G + ++ V++T MI+G G DEA L+ ++R+
Sbjct: 555 VDEAMRLFSEMGL---------KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Query: 445 RIDSVTLISLLQAL 458
ID+ +L+ ++
Sbjct: 606 TIDNKVYTALIGSM 619
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/518 (20%), Positives = 217/518 (41%), Gaps = 87/518 (16%)
Query: 81 LIRLYSEYGKLEDAHRVFDEITNKDLVAYTSIITAYAHSGGSCVYGAFRIASTMQDQRLY 140
+ R+Y + G E+ RVFD + K L SI D+R
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGL----SI-----------------------DER-- 190
Query: 141 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 200
+ + L AA K RR +C EIF ++D GVK+
Sbjct: 191 ----SCIVFLVAAKK---------------RRRIDLCLEIFR-RMVD-----SGVKI--- 222
Query: 201 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 260
TV S ++ G+ ++ +L ++ + + P+ T I + +
Sbjct: 223 ----------TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 261 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNK----DAVIY 315
+ + M + GV + V T L++L K ++ A K+F+ +R + D +Y
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 316 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL- 374
+++ + A +F E+ + +SP+ + LI V + ++ A + +
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 375 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHID 430
+ IT+V + N +I Y + G + A ++++ M + D+ + ++ + + D
Sbjct: 393 KGVNITQV-VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 431 EAI-ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNS 488
EA LFR+++ +++ +V+ +L+ + G + K + ++ + ++ N
Sbjct: 452 EAKQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY-NV 509
Query: 489 LITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGN 544
+I Y K GK+ AR L M + ++ +++ + N E ++LF+ M L
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 545 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE-YTI 581
+ + +T+T +++ S +G +E ++ M R+ YTI
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 215/509 (42%), Gaps = 62/509 (12%)
Query: 122 SCVYGAFRIASTMQDQRLYPNR-VTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI 180
SCV A ++ + L+ + +T ++ A G + + + +GF +++
Sbjct: 54 SCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL 113
Query: 181 FETTLLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQM 238
F +++ +Y + G + A +F ++ +V +N ++ L + + ++R M
Sbjct: 114 F-ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 172
Query: 239 IHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY------MIRMGVEPDMVACTALVDLY 292
P++ T N +L LC + G M G PD V+ T ++
Sbjct: 173 KRDGFEPNVFTY-NVLLKA-----LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 293 SKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 351
+ + K R++ ER +V YN ++ G K A + EM++ +SPNV +
Sbjct: 227 CEVGLVKEGRELAERFEPVVSV-YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 352 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM--- 408
LI+ + + I LA S +L+ + + ++ G A ++N+M
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 409 --RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 466
++V++ +++ G+ HG+I +A+ S+ + ++GC
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAV-------------------SVFSHMEEIGCSPN 386
Query: 467 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTS---WNAMLG 522
++ TY SLI +AK G L+ A Y++ +M T C + + M+
Sbjct: 387 IR-----TY-----------GSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 523 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
A H + E L M N P TF + + +G ++ ++FR M +++
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 583 PGEVHYNCIIDLLSRAGQLTEAYNLVKSM 611
P V YN ++D L++A ++ EAY L + +
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 201/501 (40%), Gaps = 70/501 (13%)
Query: 124 VYGAFRIASTMQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE- 182
V GA ++ M ++ P+ V+ +++ + ++G ++EGR + E FE
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA------------ERFEP 244
Query: 183 -----TTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELF 235
L++ K K A + +M S V S++ LI ++GQ AF
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 236 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLY-S 293
QM+ R P++ TL++ + C + MIR G++P++VA LV + S
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 294 KFDVTKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 349
++ KA +F + + + Y ++ G+ K A+ ++++M+ PNV +
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 350 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 409
+ N++ A+ + A S+ + + V N I G L +A VF +M
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 410 SR-----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL 464
+ ++V++ ++ G I+EA L R + + S T +LL G
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG-- 542
Query: 465 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAY 524
G L + ++ ++ M N ++ AY
Sbjct: 543 -------------LPGIALQLVGKMMVDGKSPDEITM----------------NMIILAY 573
Query: 525 AMHGNYAEVLKLFNHMKLGNIK--PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 582
G ++ + + G K PD +++T+++ S E+G+ + MI IV
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISA-GIV 632
Query: 583 PG----EVHYNC-IIDLLSRA 598
P V NC I+D + RA
Sbjct: 633 PSIATWSVLINCFILDDIVRA 653