Miyakogusa Predicted Gene
- Lj0g3v0048509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0048509.1 tr|G7KQ86|G7KQ86_MEDTR CCP OS=Medicago truncatula
GN=MTR_6g069840 PE=4 SV=1,27.19,3e-18,seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Tetratricopeptide-like hel,CUFF.2244.1
(540 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 400 e-112
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 395 e-110
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 385 e-107
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-103
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 6e-93
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 6e-93
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 1e-90
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 2e-90
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 5e-88
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 315 6e-86
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 8e-84
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 2e-80
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 4e-79
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 1e-78
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 282 3e-76
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 6e-75
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 6e-66
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 3e-64
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 6e-63
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 8e-63
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 8e-62
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 234 9e-62
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 229 4e-60
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 228 8e-60
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 2e-57
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 2e-56
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 7e-52
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 197 2e-50
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 4e-50
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 193 3e-49
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 192 4e-49
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 190 2e-48
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 190 2e-48
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 3e-48
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 188 9e-48
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 5e-47
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 183 2e-46
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 8e-44
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 165 9e-41
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 162 6e-40
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 9e-39
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 157 2e-38
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 3e-38
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 3e-38
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 156 4e-38
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 1e-37
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 6e-35
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 6e-35
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 145 7e-35
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 141 1e-33
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 140 3e-33
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 140 3e-33
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 4e-31
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 129 6e-30
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 9e-30
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 127 2e-29
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 4e-29
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 125 5e-29
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 125 1e-28
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 122 5e-28
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 122 6e-28
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 121 1e-27
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 120 2e-27
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 4e-27
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 119 4e-27
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 116 4e-26
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 115 7e-26
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 115 7e-26
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 113 4e-25
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 112 7e-25
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 8e-24
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 106 4e-23
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 5e-23
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 106 5e-23
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 105 6e-23
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 102 7e-22
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 100 4e-21
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 99 7e-21
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 98 1e-20
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 97 2e-20
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 93 4e-19
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 93 5e-19
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 92 6e-19
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 91 3e-18
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 90 5e-18
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 89 6e-18
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 89 8e-18
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 88 2e-17
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 87 3e-17
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 86 4e-17
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 86 6e-17
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 86 9e-17
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 85 1e-16
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 85 1e-16
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 84 2e-16
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 83 5e-16
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 82 9e-16
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 82 1e-15
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 79 7e-15
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 77 2e-14
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 77 4e-14
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 75 1e-13
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 62 1e-09
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 61 2e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 7e-09
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 7e-09
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 7e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 58 1e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/536 (38%), Positives = 314/536 (58%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
DD + F M+ R P +I+F+++ +++ KTK Y ++L +QME+ GI N TL+I
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+INC C + AFS + I+K GY P+TITF+TLI GLCL G++ AL+ D ++ G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 154 FQLDQVTYATLINGLC-----------------------------------KMGQTEAAL 178
+ D +T TL+NGLC K GQT A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
ELLR++E R IK V Y+ IID LCK + +AF+L++EM KGI+ N++TY+ LI GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ LL +M+ + I+P+VVT+++L+D+ KEGK+REA+ + MI +G+ PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
+TY+SL+DG+C N ++KA + + M +G PN++++NI+I G CK +D+ L L +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ + VTY++LI G C+ GK++ A EL EM R P +I+TY LD LC
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
+K + + +KI ++ D+ YNI++ G+C ++ DA ++F L KG TYN
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI GLCK+G EA L KME++G D T+ +I A G+ K+ KL+ E+
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 251/464 (54%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + + +RM++M P +I N ++ L + + A+ L +M G PN VT
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++N C GQT A +L + +R D + ++ +I GLC HG L A +++ +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ +TY LI G C G+ + +LLR + R I P VV ++ +IDS K + A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+L+ EMI +GI+P+ +TY++LI GFC L +A ++D MV K DP++ T+NIL++
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K ++ + + M +GV D VTY++L+ G+C + ++N A+++F M R V PN+
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y I++ GLC ++AL + E+++ K+ + Y+ +I G+C KV +AW+L
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
+ ++G + TYN + LCK + + L +K+ + G PD TYNIL+ G
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+ ++ ++L + G++++ T +I+ L L L ++S
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 207/379 (54%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ ++ L + + K Q + L L +++E +GI + + +I+ C+ + + AF +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
+I G PN +T+S LI G C+ G++ +A+ L+D MV PD++T N LV+ L GK
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M++ G +P+ VTY +++ C + A ++ M R + + Y+I
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I GLCK +D A NL EM+ + I N +TY+ LI G C G+ + +LL +M R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+++T++ +D+ K + + L K++I +GI PD TY L+DG CK + A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ + KG + N T+N +ING CK D+ L L KM G + D +T+ T+I
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 519 FEKGENDKAEKLLREMIAR 537
E G+ + A++L +EM++R
Sbjct: 449 CELGKLNVAKELFQEMVSR 467
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 200/365 (54%)
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
+ + A++L R + PTV+ ++ + ++ K K L +M KGI+ N+ T S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+I FC +L A + +++ +P+ +T++ L++ L EG+V EA ++ M++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
G KPD++T ++L++G CL + +A + + M G PN +Y ++ +CK A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
+ LL +M+ I + V YS +IDGLCK G + NA+ L +EM ++G +IITYN +
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
C D G L++ +I + I P++ T+++L+D K G++++A+E+ +++ +G +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
TY ++I+G CKE D+A ++ M GC + TF +I+ + D +L R
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 533 EMIAR 537
+M R
Sbjct: 428 KMSLR 432
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 174/327 (53%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D+ + FN M IT II +N ++ + L R M I PN VT +
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI+ G+ A + ++ RG PDTIT+ +LI G C L +A Q D ++++
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + T+ LING CK + + LEL R++ RG+ V YNT+I C++ ++ A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM+++ + PN+VTY L+ G C G+ ++A+ + +++ ++ D+ YNI++
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ KV +A ++ + +GVKP V TY+ ++ G C +++A +F M G P+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEM 359
+YNI+I +++ L+EE+
Sbjct: 578 GWTYNILIRAHLGDGDATKSVKLIEEL 604
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 307/500 (61%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
DD ++ F M++ R P +++F++ +++ +TK ++ + +Q+E+ GI N TLNI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
INC C +T A+SVL ++K GY PDT TFNTLIKGL L GK+ A+ D ++ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
Q D VTY +++NG+C+ G T AL+LLR++E R +K V Y+TIIDSLC+ + A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L+ EM KGI +VVTY++L+ G C G+ LL +MV + I P+V+T+N+L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
KEGK++EA + MI +G+ P+++TY++LMDGYC+ N +++A ++ + M R +P++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
++ +I G C +K VD+ + + + ++ N VTYS L+ G C++GK+ A EL EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
G D++TY LD LC ++K + + + + + + Y +++G+CK G++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 514
+DA +F L KG N TY MI+GLCK+G EA L+ KME++G + T+ T+
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 515 ISALFEKGENDKAEKLLREM 534
I A G+ + KL+ EM
Sbjct: 550 IRAHLRDGDLTASAKLIEEM 569
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 221/415 (53%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + V +RM++ P ++ +N ++ + ++ S A+ L R+ME + + T +
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I+ C G +A S+ + +G +T+N+L++GLC GK + D++++
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ +T+ L++ K G+ + A EL + + RGI P ++ YNT++D C +S A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++ M+ SP++VT+++LI G+C+V ++ + + + + + + VTY+ILV
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+ GK++ A+ + M+ GV PDV+TY L+DG C ++ KA ++F + + + +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
Y +I G+CK V++A NL + + + PN +TY+ +I GLCK G +S A LL +
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
M G + TYN+ + A + + LI+++ G D + +++D L
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 191/350 (54%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P++V ++ ++ + K + D ++ GI+ N+ T + +I FC + A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L +++ +PD T+N L+ L EGKV EA ++ M++ G +PDVVTY+S+++G C
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
+ + A D+ M R V +V +Y+ +I LC+ +D A++L +EM+ + I + VT
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
Y+SL+ GLCK GK ++ LL +M R ++IT+N LD K + + L K++I
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+GI P++ TYN L+DG C R+ +A + + + + + T+ ++I G C D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ + + + G + + +T+ ++ + G+ AE+L +EM++ +L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP-ADIITYNSFLDALCKG 416
E D+ I V + + K +A L EM +R +P ++ ++ F A+ +
Sbjct: 43 ERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEM-IRSRPLPSLVDFSRFFSAIART 101
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+ + K++ GI ++ T NI+++ C+C + A V + K GY + T+
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
NT+I GL EG EA+ L+ +M +NGC D +T+ +I++ + G+ A LLR+M
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 537 RDL 539
R++
Sbjct: 222 RNV 224
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 315/536 (58%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DD V+ F M++ R P IIEF+K+L+++ K + ISL QM+ GI N T +I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 94 LINCHCYLGQTTSAFSVLANILK-----------------------------------RG 118
LINC C Q A +VL ++K G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y P+T+TFNTLI GL LH K A+ D ++A+G Q D VTY ++NGLCK G T+ A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL ++E ++P V++YNTIID LCK K + A +L+ EM KGI PNVVTYS+LI
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL +M+ + I+PDV T++ L+DA KEGK+ EA+ + M+K+ + P +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
VTYSSL++G+C+ + +++A+ +F M + P+V +YN +I G CK K V+E + + E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY+ LI GL + G A E+ EM G P +I+TYN+ LD LCK
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K + + + + ++P + TYNI+++G+CK G+++D ++F +L KG + YNT
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI+G C++G +EA L +M+++G + + + T+I A G+ + + +L++EM
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 217/378 (57%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ ++ L++ + KM + + + L +++ GI Y+ +I+ C+ + A + +
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G PN+VT S+L+ G+C ++ +A+ L+D+M + P+ VT+N L+ L K
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M+ +G +PD+VTY +++G C + + A ++ N M + + P V YN
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I GLCK K +D+ALNL +EM+ + I PN VTYSSLI LC G+ S+A LL +M R
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
D+ T+++ +DA K + + L +++ + I P + TY+ L++G C R+ +A+
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++F+ + K + TYNT+I G CK +E + + +M G + + +T+ +I L
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 519 FEKGENDKAEKLLREMIA 536
F+ G+ D A+++ +EM++
Sbjct: 442 FQAGDCDMAQEIFKEMVS 459
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 203/373 (54%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ D + N+M Q ++ P ++ +N ++ L K KH A++L ++ME GI PN VT +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+C C G+ + A +L+++++R +PD TF+ LI GKL A + +D+++ +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
VTY++LING C + + A ++ + + P VV YNT+I CK K V
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ EM +G+ N VTY+ LI G G A + EMV + P+++TYN L+D
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K GK+ +A + + + ++P + TY+ +++G C +V D+F ++ +GV P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YN MI G C+ +EA L +EM + +PN Y++LI + G + EL+
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 393 EMHVRGQPADIIT 405
EM G D T
Sbjct: 596 EMRSCGFAGDAST 608
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 201/375 (53%), Gaps = 1/375 (0%)
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
NGL ++ +A ++ R P+++ ++ ++ ++ K+ L +M GI
Sbjct: 55 NGLSELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
N TYS LI FC QL A+ +L +M+ +P++VT + L++ ++ EA +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
+ M G +P+ VT+++L+ G L N+ ++A + + M +G P++ +Y +++ GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
D A NLL +M+ K+ P + Y+++IDGLCK + +A L EM +G +++T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
Y+S + LC L+ +I++ I PD+ T++ L+D K G++ +A++++ ++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 525
K+ + + TY+++ING C DEA + M C D +T+ T+I + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 526 KAEKLLREMIARDLL 540
+ ++ REM R L+
Sbjct: 414 EGMEVFREMSQRGLV 428
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/536 (38%), Positives = 316/536 (58%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DD V F M+Q R P I+EFNK+L+++ K + ISL +M+ I+ + + NI
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPD------------------------------- 122
LINC C Q A +VL ++K GY PD
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 123 ----TITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
T+TFNTLI GL LH K A+ D ++A+G Q D TY T++NGLCK G + AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL+++E I+ VV+Y TIID+LC K V+ A +L++EM KGI PNVVTY++LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL +M+ + I+P+VVT++ L+DA KEGK+ EA+ + MIK+ + PD+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TYSSL++G+C+ + +++A+ +F M + PNV +YN +I G CK K V+E + L E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY++LI GL + G A ++ +M G P DIITY+ LD LCK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K + + + + ++PD+ TYNI+++G+CK G+++D ++F L KG N Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI+G C++GL +EA L +M+++G + + T+ T+I A G+ + +L++EM
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 209/385 (54%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D +S +M + +I ++ + ++ +L K+ + A++L +M+ GI PN VT N
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI C C G+ + A +L+++++R +P+ +TF+ LI GKL A + +D+++ +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D TY++LING C + + A + + + P VV YNT+I CK K V
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM +G+ N VTY+ LI G G A + +MV + PD++TY+IL+D
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K GK+ +A + + K ++PD+ TY+ +++G C +V D+F +++ +GV PN
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V Y MI G C+ + +EA L EM + +PN TY++LI + G + + EL+
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 393 EMHVRGQPADIITYNSFLDALCKGH 417
EM G D T + ++ L G
Sbjct: 595 EMRSCGFVGDASTISMVINMLHDGR 619
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 213/378 (56%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
V + L++ + KM + + + L R++ I + YN +I+ C+ + A + +
Sbjct: 81 VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G P++VT S+L+ G+C ++ +A+ L+D+M + P+ VT+N L+ L K
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M+ +G +PD+ TY ++++G C +++ A + M + + +V Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I LC K V++ALNL EMD + I PN VTY+SLI LC G+ S+A LL +M R
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+++T+++ +DA K + + L ++I + I PD+ TY+ L++G C R+ +A+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+F+ + K N TYNT+I G CK +E + L +M G + + +T+ T+I L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 519 FEKGENDKAEKLLREMIA 536
F+ G+ D A+K+ ++M++
Sbjct: 441 FQAGDCDMAQKIFKKMVS 458
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 192/350 (54%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P++V +N ++ ++ K+ L M IS ++ +Y+ LI FC QL A+ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L +M+ +PD+VT + L++ ++ EA ++ M +P+ VT+++L+ G L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
N+ ++A + + M RG P++ +Y ++ GLCK +D AL+LL++M+ KI + V
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
Y+++ID LC V++A L EM +G +++TYNS + LC L+ +I
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
++ I P++ T++ L+D K G++ +A++++ ++ K+ + + +TY+++ING C D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA + M C + +T+ T+I + ++ +L REM R L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 145/276 (52%), Gaps = 5/276 (1%)
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
++ N+L+D K+ +A ++ M++ P +V ++ L+ +N+ + +
Sbjct: 51 LSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
M ++ ++ SYNI+I C+ + AL +L +M P+ VT SSL++G C +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
+S A L+D+M V + +T+N+ + L + + +ALI +++ +G QPD+ TY
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
+++GLCK G I A + + + K + Y T+I+ LC ++AL L ++M++ G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 504 CIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ +T+ ++I L G A +LL +MI R +
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 316/536 (58%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VDD V F M++ R P I+EFNK+L+++ K + ISL QM+ GI+ + T +I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPD------------------------------- 122
INC C Q + A +VLA ++K GY PD
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 123 ----TITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
T TF TLI GL LH K A+ D ++ +G Q D VTY T++NGLCK G + AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL+++E I+ VV+YNTIID LCK K + A +L++EM KGI P+V TYS+LI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL +M+ + I+P+VVT++ L+DA KEGK+ EA+ + MIK+ + PD+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TYSSL++G+C+ + +++A+ +F M + PNV +Y+ +I G CK K V+E + L E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY++LI G + NA + +M G +I+TYN LD LCK
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
+ K + + + + ++PD+ TYNI+++G+CK G+++D E+F +L KG + N YNT
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI+G C++G +EA +L+ KM+++G + + T+ T+I A G+ + + +L++EM
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 208/373 (55%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D +S +M + +I ++ +N ++ L K KH A++L +M+ GI P+ T +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+C C G+ + A +L+++++R +P+ +TF+ LI GKL A + +D+++ +
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D TY++LING C + + A + + + P VV Y+T+I CK K V
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM +G+ N VTY+ LI+GF A + +MV + P+++TYNIL+D
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K GK+ +A + + + ++PD+ TY+ +++G C +V ++F ++ +GV+PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YN MI G C+ +EA +LL++M + +PN TY++LI + G + EL+
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 393 EMHVRGQPADIIT 405
EM G D T
Sbjct: 598 EMRSCGFAGDAST 610
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 213/378 (56%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
V + L++ + KM + E + L +++ GI + Y+ I+ C+ +S A + ++
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G P++VT S+L+ G+C ++ A+ L+D+MV PD T+ L+ L K
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M+++G +PD+VTY ++++G C +++ A + M + + +V YN
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I GLCK K +D+ALNL EMD + I P+ TYSSLI LC G+ S+A LL +M R
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+++T+++ +DA K + + L ++I + I PD+ TY+ L++G C R+ +A+
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+F+ + K N TY+T+I G CK +E + L +M G + + +T+ T+I
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 519 FEKGENDKAEKLLREMIA 536
F+ + D A+ + ++M++
Sbjct: 444 FQARDCDNAQMVFKQMVS 461
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 196/350 (56%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P++V +N ++ ++ K+ L +M GIS ++ TYS I FC QL A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L +M+ +PD+VT + L++ ++ +A ++ M++ G KPD T+++L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
N+ ++A + + M +RG P++ +Y ++ GLCK +D AL+LL++M+ KI + V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
Y+++IDGLCK + +A L EM +G D+ TY+S + LC L+ +I
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
++ I P++ T++ L+D K G++ +A++++ ++ K+ + + +TY+++ING C D
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA + M C + +T+ T+I + ++ +L REM R L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 178/330 (53%)
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
V A DL+ +M+ P++V ++ L+ + + + I L ++M I D+ TY+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
++ + ++ A +LA M+K G +PD+VT SSL++GYC ++ A + + M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
P+ ++ +I+GL EA+ L+++M P+ VTY ++++GLCK G + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
LL +M AD++ YN+ +D LCK H+D + L ++ +KGI+PD+ TY+ L+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
C GR DA + D+ ++ N N T++ +I+ KEG EA L +M D
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 509 ITFETIISALFEKGENDKAEKLLREMIARD 538
T+ ++I+ D+A+ + MI++D
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 185/356 (51%), Gaps = 14/356 (3%)
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
++G G PTV + + S C + + A Y E++ +S + +
Sbjct: 18 LQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDII--------------K 63
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+ A+ L +MV P +V +N L+ A+ K K ++ M G+ D+ TYS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
++ +C ++++ A V M + G P++ + + ++ G C K + +A+ L+++M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
P+ T+++LI GL K S A L+D+M RG D++TY + ++ LCK +D +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+L+KK+ I+ D+ YN ++DGLCK + DA +F ++ KG + +TY+++I+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
C G + +A L+S M + + +TF +I A ++G+ +AEKL EMI R +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 310/535 (57%), Gaps = 35/535 (6%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
DD V F M + R P +I+F+++ + + +TK Y + L +QME+ GI N TL+I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF--------H 146
INC C + + AFS + I+K GY PDT+TF+TLI GLCL G++ AL+ H
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 147 ---------------------------DDVLAQGFQLDQVTYATLINGLCKMGQTEAALE 179
D ++ GFQ ++VTY ++ +CK GQT A+E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 180 LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFC 239
LLR++E R IK V Y+ IID LCK + +AF+L++EM KG +++ Y+ LI GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
G+ LL +M+ + I PDVV ++ L+D KEGK+REA+ + MI++G+ PD V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
TY+SL+DG+C N+++KA + + M +G PN++++NI+I G CK ++D+ L L +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 419
++ + VTY++LI G C+ GK+ A EL EM R DI++Y LD LC
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
+K + + +KI ++ D+ YNI++ G+C ++ DA ++F L KG + TYN M
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
I GLCK+G EA L KME++G + T+ +I A +G+ K+ KL+ E+
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 250/465 (53%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
V + + +RM++M P +I N ++ L S A+ L +M TG PN VT
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++ C GQT A +L + +R D + ++ +I GLC G L A +++ +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF+ D + Y TLI G C G+ + +LLR + R I P VV ++ +ID K + A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EMI +GISP+ VTY++LI GFC QL +A +LD MV K P++ T+NIL++
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K + + + M +GV D VTY++L+ G+C + ++ A+++F M R V P+
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ SY I++ GLC ++AL + E+++ K+ + Y+ +I G+C KV +AW+L
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
+ ++G D+ TYN + LCK + + L +K+ + G P+ CTYNIL+ G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+ ++ +++ + G++++ T +++ L L L ++S
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 206/379 (54%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ ++ L + + + Q + L+L +++E +GI + + +I+ C+ + +S AF +
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
+I G P+ VT+S LI G C+ G++ +A+ L+D MV P ++T N LV+ L GK
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
V +A ++ M++ G +P+ VTY ++ C + A ++ M R + + Y+I
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I GLCK +D A NL EM+ + + + Y++LI G C G+ + +LL +M R
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
D++ +++ +D K + + L K++I +GI PD TY L+DG CK ++ A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+ + KG N T+N +ING CK L D+ L L KM G + D +T+ T+I
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 519 FEKGENDKAEKLLREMIAR 537
E G+ + A++L +EM++R
Sbjct: 433 CELGKLEVAKELFQEMVSR 451
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 6/265 (2%)
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
K +A ++ M + +P ++ +S L + + D+ M +G+ N+ + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 338 IMIYGLC---KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
IMI C K+ + A+ + ++ YE P+ VT+S+LI+GLC G+VS A EL+D M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYE---PDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
G +IT N+ ++ LC V + LI ++++ G QP+ TY +L +CK G+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 514
A E+ + + ++ L+ Y+ +I+GLCK+G D A L ++ME G D I + T+
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 515 ISALFEKGENDKAEKLLREMIARDL 539
I G D KLLR+MI R +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKI 313
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP-ADIITYNSFLDALCKGHHVDKGIAL 425
KV+Y + K +A +L EM R +P +I ++ + + D + L
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEM-TRSRPRPRLIDFSRLFSVVARTKQYDLVLDL 94
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
K++ KGI ++ T +I+++ C+C ++ A + K GY + T++T+INGLC
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154
Query: 486 EGLFDEALTLMSKMEDNGCIHDP--ITFETIISALFEKGENDKAEKLLREMI 535
EG EAL L+ +M + G H P IT +++ L G+ A L+ M+
Sbjct: 155 EGRVSEALELVDRMVEMG--HKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 315/536 (58%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DD V+ F M++ R P I+EF+K+L+++ K + ISL QM+ GI+ N T +I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 94 LINCHCYLGQTTSAFSVLANILK-----------------------------------RG 118
LINC C Q + A +VLA ++K G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y PD+ TFNTLI GL H + A+ D ++ +G Q D VTY ++NGLCK G + AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL+++E I+P VV+YNTIID+LC K V+ A +L++EM KGI PNVVTY++LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL +M+ + I+P+VVT++ L+DA KEGK+ EA+ + MIK+ + PD+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TYSSL++G+C+ + +++A+ +F M + PNV +YN +I G CK K VDE + L E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY++LI G + + NA + +M G DI+TY+ LD LC
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
V+ + + + + ++PD+ TYNI+++G+CK G+++D ++F L KG N TY T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
M++G C++GL +EA L +M++ G + D T+ T+I A G+ + +L+REM
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 204/363 (56%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D +S +M Q +I P ++ +N ++ +L K+ + A++L +M+ GI PN VT N
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI C C G+ + A +L+++++R +P+ +TF+ LI GKL A + +D+++ +
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D TY++LING C + + A + + + P VV YNT+I CK K V
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM +G+ N VTY+ LI+GF + A + +MV + PD++TY+IL+D
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L GKV A + + + ++PD+ TY+ +++G C +V D+F +++ +GV PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +Y M+ G C+ + +EA L EM E +P+ TY++LI + G + + EL+
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 393 EMH 395
EM
Sbjct: 596 EMR 598
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 222/403 (55%)
Query: 138 KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
KL A+ D++ V ++ L++ + KM + + + L +++ GI + Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 198 TIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK 257
+I+ C+ +S A + ++M+ G P++VT ++L+ GFC ++ A+ L+ +MV
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 258 NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
PD T+N L+ L + + EA ++ M+ +G +PD+VTY +++G C +++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 318 RDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
+ M + + P V YN +I LC K V++ALNL EMD + I PN VTY+SLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
LC G+ S+A LL +M R +++T+++ +DA K + + L ++I + I PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+ TY+ L++G C R+ +A+ +F+ + K N TYNT+I G CK DE + L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+M G + + +T+ T+I F+ E D A+ + ++M++ +L
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/519 (38%), Positives = 298/519 (57%), Gaps = 35/519 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+D + F M+Q R P I+FN++ +++ +TK Y + + ME+ GI + T+ I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTL------------------------ 129
+INC+C + AFSVL K GY PDTITF+TL
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 130 -----------IKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
I GLCL G++ AL D ++ GFQ D+VTY ++N LCK G + AL
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+L R++E R IK +VV Y+ +IDSLCK A L++EM KGI +VVTYS+LI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ +L EM+ +NI PDVVT++ L+D KEGK+ EAK + MI +G+ PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
+TY+SL+DG+C N +++A +F+ M +G P++ +Y+I+I CK K VD+ + L E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
+ + +IPN +TY++L+ G C++GK++ A EL EM RG P ++TY LD LC
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K + + +K+ + + YNI++ G+C ++ DA +F L KG + TYN
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
MI GLCK+G EA L KM+++GC D T+ +I A
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 252/464 (54%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + V+ +RM++M+ P ++ + ++ L S A+ L +M G P+ VT
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++N C G + A + + +R + ++ +I LC G AL +++ +G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D VTY++LI GLC G+ + ++LR + GR I P VV ++ +ID K + A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+LY+EMI +GI+P+ +TY++LI GFC L +A + D MV K +PD+VTY+IL+++
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K +V + + + +G+ P+ +TY++L+ G+C ++N A+++F M RGV P+V
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y I++ GLC +++AL + E+M ++ Y+ +I G+C KV +AW L
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
+ +G D++TYN + LCK + + L +K+ + G PD TYNIL+
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+ + E+ +++ G++ ++ T +I+ L L L ++S
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 220/432 (50%)
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ A + ++++ P I FN L + + L F + G + D T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
+IN C+ + A +L R G +P + ++T+++ C VS A L M+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
P++VT S LI G C+ G++ +A+ L+D MV PD VTY +++ L K G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
++ M ++ +K VV YS ++D C + A +FN M +G+ +V +Y+ +I G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
LC D+ +L EM IIP+ VT+S+LID K GK+ A EL +EM RG D
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
ITYNS +D CK + + + + ++ KG +PD+ TY+IL++ CK R+ D +F+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
++ KG N TYNT++ G C+ G + A L +M G +T+ ++ L + G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 523 ENDKAEKLLREM 534
E +KA ++ +M
Sbjct: 470 ELNKALEIFEKM 481
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 215/400 (53%)
Query: 138 KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
K++ A+ + ++ + + L + + + Q + L + +E GI+ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 198 TIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK 257
+I+ C+ K + AF + G P+ +T+S L+ GFC+ G++ +A+ L+D MV
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 258 NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
PD+VT + L++ L +G+V EA ++ M++ G +PD VTY +++ C A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 318 RDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
D+F M R + +V Y+I+I LCK D+AL+L EM+ + I + VTYSSLI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
LC GK + ++L EM R D++T+++ +D K + + L ++I +GI PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
TYN L+DG CK + +A ++F + KG + TY+ +IN CK D+ + L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
++ G I + IT+ T++ + G+ + A++L +EM++R
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 198/377 (52%), Gaps = 1/377 (0%)
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
L NG+ + +A I+ R + PT + +N + ++ + K M G
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
I ++ T + +I +C +L A +L +PD +T++ LV+ EG+V EA
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
++ M++ +PD+VT S+L++G CL V++A + + M G P+ +Y ++ L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
CK AL+L +M+ I + V YS +ID LCK G +A L +EM ++G AD+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
+TY+S + LC D G +++++I + I PD+ T++ L+D K G++ +A+E++ +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ +G + TYN++I+G CKE EA + M GC D +T+ +I++ +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 524 NDKAEKLLREMIARDLL 540
D +L RE+ ++ L+
Sbjct: 401 VDDGMRLFREISSKGLI 417
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/536 (38%), Positives = 307/536 (57%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DD + F M++ R P I+EFNK+L+++ K K + ISL +M+ I T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 94 LINCHCYLGQTTSAFSVLANILK-----------------------------------RG 118
LINC C Q + A ++L ++K G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y PDTITF TLI GL LH K A+ D ++ +G Q + VTY ++NGLCK G T+ AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL ++E I+ VV++NTIIDSLCK + V A +L+ EM KGI PNVVTYS+LI
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL +M+ K I+P++VT+N L+DA KEGK EA+ + MIK+ + PD+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TY+SL++G+C+ + ++KA+ +F M + P+V +YN +I G CK K V++ L E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M + ++ + VTY++LI GL G NA ++ +M G P DI+TY+ LD LC
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K + + + I+ D+ Y +++G+CK G++ D ++F L KG N TYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI+GLC + L EA L+ KM+++G + + T+ T+I A G+ + +L+REM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 206/363 (56%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ D ++ N+M +I ++ FN ++ SL K +H A++L ++ME GI PN VT +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+C C G+ + A +L++++++ +P+ +TFN LI GK A + +DD++ +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D TY +L+NG C + + A ++ + + P VV YNT+I CK K V
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM +G+ + VTY+ LI G G A + +MV + PD++TY+IL+D
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L GK+ +A + M K +K D+ Y+++++G C +V+ D+F +++ +GV PN
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YN MI GLC +++ EA LL++M + +PN TY++LI + G + + EL+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 393 EMH 395
EM
Sbjct: 600 EMR 602
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 213/378 (56%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
V + L++ + KM + + + L +++ I + YN +I+ C+ +S A L +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G P++VT S+L+ G+C ++ A+ L+D+MV PD +T+ L+ L K
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M+++G +P++VTY +++G C + + A ++ N M + +V +N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I LCK + VD+ALNL +EM+ + I PN VTYSSLI LC G+ S+A +LL +M +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+++T+N+ +DA K + L +I + I PD+ TYN L++G C R+ A+
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++F+ + K + TYNT+I G CK ++ L +M G + D +T+ T+I L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 519 FEKGENDKAEKLLREMIA 536
F G+ D A+K+ ++M++
Sbjct: 446 FHDGDCDNAQKVFKQMVS 463
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 203/377 (53%), Gaps = 1/377 (0%)
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
L NGL M +A ++ R + P++V +N ++ ++ K+K L +M
Sbjct: 57 LRNGLHDMKLDDAIGLFGGMVKSRPL-PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
I + TY+ LI FC Q+ A+ LL +M+ +P +VT + L++ ++ +A
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
++ M++ G +PD +T+++L+ G L N+ ++A + + M +RG PN+ +Y +++ GL
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
CK D ALNLL +M+ KI + V ++++ID LCK V +A L EM +G ++
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
+TY+S + LC L+ +I+K I P++ T+N L+D K G+ +A++++ D
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ K+ + + +TYN+++NG C D+A + M C D +T+ T+I +
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 524 NDKAEKLLREMIARDLL 540
+ +L REM R L+
Sbjct: 416 VEDGTELFREMSHRGLV 432
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/536 (36%), Positives = 315/536 (58%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ V F M++ R P I+EF+K+L+++ K K + IS +MEI G++ N T NI
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 94 LINCHCYLGQTTSAFSVLANILK-----------------------------------RG 118
+INC C Q + A ++L ++K G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y PDT+TF TL+ GL H K A+ + ++ +G Q D VTY +INGLCK G+ + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL ++E I+ VV+Y+T+IDSLCK + V A +L++EM KGI P+V TYS+LI
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL +M+ + I+P+VVT+N L+DA KEGK+ EA+ + MI++ + P++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
VTY+SL++G+C+ + +++A+ +F M + P+V +YN +I G CK K V + + L +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY++LI G + NA + +M G +I+TYN+ LD LCK
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K + + + + ++PD+ TYNI+ +G+CK G+++D ++F L KG + YNT
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI+G CK+GL +EA TL KM+++G + D T+ T+I A G+ + +L++EM
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 247/460 (53%), Gaps = 1/460 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ + V+ ++M++M P + F ++ L + S A++L +M + G P+ VT
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+IN C G+ A ++L + K D + ++T+I LC + + AL ++ +G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D TY++LI+ LC G+ A LL + R I P VV +N++ID+ K + A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ EMI + I PN+VTY++LI GFC+ +L +A + MV K+ PDVVTYN L++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K KV + + M ++G+ + VTY++L+ G+ ++ + A+ VF M GV PN+
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+YN ++ GLCK +++A+ + E + K+ P+ TY+ + +G+CK GKV + W+L
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
+ ++G D+I YN+ + CK ++ L K+ + G PD TYN L+ + G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 493
+ E+ +++ + + TY ++ + +G D+
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 609
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 226/408 (55%)
Query: 129 LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG 188
L + LH KL A+ +++ V ++ L++ + KM + + + ++E G
Sbjct: 36 LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
+ + YN +I+ LC+ +S A + +M+ G P++VT ++L+ GFC ++ +A+
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
L+D+MV PD VT+ LV L + K EA ++ M+ +G +PD+VTY ++++G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C E + A ++ N M + + +V Y+ +I LCK + VD+ALNL EMD + I P+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
TYSSLI LC G+ S+A LL +M R +++T+NS +DA K + + L +
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
+I + I P++ TYN L++G C R+ +AQ++F + K + TYNT+ING CK
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+ + L M G + + +T+ T+I F+ + D A+ + ++M++
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 190/350 (54%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P++V ++ ++ ++ K+K +M G+S N+ TY+ +I C QL A+ +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L +M+ P +VT N L++ ++ EA ++ M++ G +PD VT+++L+ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
N+ ++A + M +G P++ +Y +I GLCK D ALNLL +M+ KI + V
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
YS++ID LCK V +A L EM +G D+ TY+S + LC L+ ++
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
++ I P++ T+N L+D K G++ +A+++F ++ ++ + N TYN++ING C D
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA + + M C+ D +T+ T+I+ + + +L R+M R L+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 196/358 (54%), Gaps = 4/358 (1%)
Query: 187 RGIKPTVVMYNTIIDSLCKVKLV----SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVG 242
RGI + + Y+ + L + L+ A DL+ EM+ P++V +S L+ +
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+ I ++M + + ++ TYNI+++ L + ++ A +L M+K G P +VT +
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
SL++G+C N +++A + + M G P+ ++ +++GL + EA+ L+E M +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
P+ VTY ++I+GLCK G+ A LL++M AD++ Y++ +D+LCK HVD
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
+ L ++ +KGI+PD+ TY+ L+ LC GR DA + D+ ++ N N T+N++I+
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
KEG EA L +M + +T+ ++I+ D+A+++ M+++D L
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 180/346 (52%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+VDD ++ F M I P + ++ +++ L +S A L M I PN VT N
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ G+ A + +++R P+ +T+N+LI G C+H +L A Q ++++
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D VTY TLING CK + +EL R + RG+ V Y T+I + +A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ +M++ G+ PN++TY+ L+ G C G+L++A+ + + + ++PD+ TYNI+ +
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ K GKV + ++ + +GVKPDV+ Y++++ G+C +A +F M G P+
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
+YN +I + + L++EM + + TY + D L
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/526 (38%), Positives = 302/526 (57%), Gaps = 35/526 (6%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M++ R P I EFNK+L+++ K K + ISL +M+ GI+ N T NILINC C Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 104 TTSAFSVLANILK-----------------------------------RGYHPDTITFNT 128
+ A ++L ++K GY PDTITF T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 129 LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG 188
LI GL LH K A+ D ++ +G Q + VTY ++NGLCK G + A LL ++E
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
I+ VV++NTIIDSLCK + V A +L+ EM KGI PNVVTYS+LI C G+ A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
LL +M+ K I+P++VT+N L+DA KEGK EA+ + MIK+ + PD+ TY+SL++G+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C+ + ++KA+ +F M + P++ +YN +I G CK K V++ L EM + ++ +
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
VTY++LI GL G NA ++ +M G P DI+TY+ LD LC ++K + +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
+ I+ D+ Y +++G+CK G++ D ++F L KG N TYNTMI+GLC + L
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
EA L+ KM+++G + D T+ T+I A G+ + +L+REM
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 205/363 (56%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D + N+M +I ++ FN ++ SL K +H A++L ++ME GI PN VT +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+C C G+ + A +L++++++ +P+ +TFN LI GK A + HDD++ +
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D TY +LING C + + A ++ + + P + YNT+I CK K V
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM +G+ + VTY+ LI G G A + +MV + PD++TY+IL+D
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L GK+ +A + M K +K D+ Y+++++G C +V+ D+F +++ +GV PN
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YN MI GLC +++ EA LL++M + +P+ TY++LI + G + + EL+
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 393 EMH 395
EM
Sbjct: 525 EMR 527
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 214/376 (56%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ L++ + KM + + + L +++ GI + YN +I+ C+ +S A L +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
G P++VT S+L+ G+C ++ A+ L+D+MV PD +T+ L+ L K
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA ++ M+++G +P++VTY +++G C +++ A ++ N M + +V +N +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
LCK + VD+ALNL +EM+ + I PN VTYSSLI LC G+ S+A +LL +M +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+++T+N+ +DA K + L +I + I PD+ TYN L++G C R+ A+++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
F+ + K + TYNT+I G CK ++ L +M G + D +T+ T+I LF
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 521 KGENDKAEKLLREMIA 536
G+ D A+K+ ++M++
Sbjct: 373 DGDCDNAQKVFKQMVS 388
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 192/350 (54%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P++ +N ++ ++ K+K L +M GIS N+ TY+ LI FC Q+ A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L +M+ +P +VT + L++ ++ +A ++ M++ G +PD +T+++L+ G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
N+ ++A + + M +RG PN+ +Y +++ GLCK +D A NLL +M+ KI + V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
++++ID LCK V +A L EM +G +++TY+S + LC L+ +I
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+K I P++ T+N L+D K G+ +A+++ D+ K+ + + +TYN++ING C D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+A + M C D T+ T+I + + +L REM R L+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 89/172 (51%)
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
+P+ ++ L+ + K K L ++M G ++ TYN ++ C+ + +A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
L+ K++ G +P + T + LL+G C RI DA + + + GY + T+ T+I+GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
EA+ L+ +M GC + +T+ +++ L ++G+ D A LL +M A
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/536 (36%), Positives = 306/536 (57%), Gaps = 35/536 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
DD V F M+Q R P +I+FN++ +++ KTK Y ++L +QME GI + TL+I
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDT------------------------------ 123
+INC C + + AFS + I+K GY PDT
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 124 -----ITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
IT NTL+ GLCL+GK+ A+ D ++ GFQ ++VTY ++N +CK GQT A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
ELLR++E R IK V Y+ IID LCK + +AF+L++EM KG +++TY+ LI GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ LL +M+ + I P+VVT+++L+D+ KEGK+REA +L M+++G+ P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
+TY+SL+DG+C N + +A + + M +G P++ ++NI+I G CK +D+ L L E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M +I N VTY++L+ G C++GK+ A +L EM R DI++Y LD LC
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K + + KI ++ D+ Y I++ G+C ++ DA ++F L KG L+ YN
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI+ LC++ +A L KM + G D +T+ +I A + A +L+ EM
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 247/464 (53%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + + +RM++M P +I N ++ L S A+ L +M TG PN VT
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++N C GQT A +L + +R D + ++ +I GLC G L A +++ +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
F+ D +TY TLI G C G+ + +LLR + R I P VV ++ +IDS K + A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L EM+ +GI+PN +TY++LI GFC +L++AI ++D M+ K DPD++T+NIL++
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K ++ + + M +GV + VTY++L+ G+C ++ A+ +F M R V P++
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
SY I++ GLC +++AL + +++ K+ + Y +I G+C KV +AW+L
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
+ ++G D YN + LC+ + K L +K+ ++G PD TYNIL+
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
A E+ +++ G+ + T +IN L L L ++S
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 212/379 (55%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ + L + + K Q E L L +++E +GI ++ + +I+ C+ + +S+AF +
Sbjct: 89 IDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK 148
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
++ G P+ V ++ L+ G C+ ++ +A+ L+D MV P ++T N LV+ L GK
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
V +A ++ M++ G +P+ VTY +++ C + A ++ M R + + Y+I
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I GLCK +D A NL EM+ + + +TY++LI G C G+ + +LL +M R
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+++T++ +D+ K + + L+K+++ +GI P+ TYN L+DG CK R+++A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ + KG + + T+N +ING CK D+ L L +M G I + +T+ T++
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 519 FEKGENDKAEKLLREMIAR 537
+ G+ + A+KL +EM++R
Sbjct: 449 CQSGKLEVAKKLFQEMVSR 467
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 209/369 (56%), Gaps = 2/369 (0%)
Query: 173 QTEAALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
+ + A++L R I+ R + PTV+ +N + ++ K K L +M +KGI+ ++ T
Sbjct: 68 KADDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
S +I FC +L A + +++ +PD V +N L++ L E +V EA ++ M++
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
G KP ++T ++L++G CL +V+ A + + M G PN +Y ++ +CK
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A+ LL +M+ I + V YS +IDGLCK G + NA+ L +EM ++G ADIITYN+ +
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
C D G L++ +I + I P++ T+++L+D K G++++A ++ +++ ++G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
N TYN++I+G CKE +EA+ ++ M GC D +TF +I+ + D +L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 532 REMIARDLL 540
REM R ++
Sbjct: 427 REMSLRGVI 435
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 181/356 (50%), Gaps = 1/356 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D+ + FN M II +N ++ + L R M I+PN VT +
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI+ G+ A +L +++RG P+TIT+N+LI G C +L A+Q D ++++
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D +T+ LING CK + + LEL R + RG+ V YNT++ C+ + A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L+ EM+++ + P++V+Y L+ G C G+L++A+ + ++ ++ D+ Y I++
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ KV +A ++ + +GVK D Y+ ++ C + ++KA +F M G P+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
+YNI+I A L+EEM P V+ ++ + +G++ ++
Sbjct: 578 ELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELDKSF 632
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/536 (37%), Positives = 305/536 (56%), Gaps = 38/536 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VDD V F M++ R P I+EFNK+L+++ K + ISL QM+ GI+ + T +I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPD------------------------------- 122
INC C Q + A +VLA ++K GY PD
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 123 ----TITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
T TF TLI GL LH K A+ D ++ +G Q D VTY T++NGLCK G + AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL ++E IK VV++NTIIDSLCK + V A DL++EM KGI PNVVTY++LI
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL M+ K I+P+VVT+N L+DA KEGK+ EA+ + MI++ + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
+TY+ L++G+C+ N +++A+ +F M + PN+Q+YN +I G CK K V++ + L E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY+++I G + G +A + +M P DI+TY+ L LC
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
+D + + K + ++ ++ YN +++G+CK G++ +A ++F L K + TYNT
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNT 540
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
MI+GLC + L EA L KM+++G + + T+ T+I A + + +L++EM
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 217/378 (57%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
V + L++ + KM + E + L +++ GI + Y+ I+ C+ +S A + ++
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G P++VT S+L+ G+C ++ A+ L+D+MV PD T+ L+ L K
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M+++G +PD+VTY ++++G C +++ A ++ N M + NV +N
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I LCK + V+ A++L EM+ + I PN VTY+SLI+ LC G+ S+A LL M +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+++T+N+ +DA K + + L +++I + I PD TYN+L++G C R+ +A+
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++F+ + K N TYNT+ING CK ++ + L +M G + + +T+ TII
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 519 FEKGENDKAEKLLREMIA 536
F+ G+ D A+ + ++M++
Sbjct: 444 FQAGDCDSAQMVFKQMVS 461
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 205/373 (54%), Gaps = 3/373 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D ++ N+M RI ++ FN ++ SL K +H A+ L +ME GI PN VT N
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LINC C G+ + A +L+N+L++ +P+ +TFN LI GKL A + H++++ +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D +TY LING C + + A ++ + + + P + YNT+I+ CK K V
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM +G+ N VTY+ +I GF G A + +MV + D++TY+IL+
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L GK+ A + + K ++ ++ Y+++++G C +V +A D+F +++ + P+
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPD 534
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YN MI GLC +++ EA +L +M + +PN TY++LI + + + EL+
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 393 EMHVRGQPADIIT 405
EM G D T
Sbjct: 595 EMRSSGFVGDAST 607
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 194/350 (55%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P++V +N ++ ++ K+ L +M GIS ++ TYS I FC QL A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L +M+ +PD+VT + L++ ++ +A ++ M++ G KPD T+++L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
N+ ++A + + M +RG P++ +Y ++ GLCK +D ALNLL +M+ +I N V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
++++ID LCK V A +L EM +G +++TYNS ++ LC L+ ++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+K I P++ T+N L+D K G++ +A+++ +++ ++ + + TYN +ING C D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA + M C+ + T+ T+I+ + + +L REM R L+
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 183/332 (55%)
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
V A DL+ +M+ P++V ++ L+ + + + I L ++M I D+ TY+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
++ + ++ A +LA M+K G +PD+VT SSL++GYC ++ A + + M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
P+ ++ +I+GL EA+ L+++M P+ VTY ++++GLCK G + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
LL++M A+++ +N+ +D+LCK HV+ + L ++ KGI+P++ TYN L++ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
C GR DA + ++ +K N N T+N +I+ KEG EA L +M D
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 509 ITFETIISALFEKGENDKAEKLLREMIARDLL 540
IT+ +I+ D+A+++ + M+++D L
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 183/356 (51%), Gaps = 14/356 (3%)
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
++G G PTV + + S C + + A Y E++ +S + +
Sbjct: 18 LQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDII--------------K 63
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+ A+ L +MV P +V +N L+ A+ K K ++ M G+ D+ TYS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
++ +C ++++ A V M + G P++ + + ++ G C K + +A+ L+++M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
P+ T+++LI GL K S A L+D+M RG D++TY + ++ LCK +D +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
L+ K+ I+ ++ +N ++D LCK ++ A ++F ++ KG N TYN++IN L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
C G + +A L+S M + + +TF +I A F++G+ +AEKL EMI R +
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/512 (37%), Positives = 296/512 (57%), Gaps = 35/512 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DD + F M++ R P I EFNK+L+++ K K + ISL +M+ GI+ N T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 94 LINCHCYLGQTTSAFSVLANILK-----------------------------------RG 118
LINC C Q + A ++L ++K G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y PDTITF TLI GL LH K A+ D ++ +G Q + VTY ++NGLCK G + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL ++E I+ VV+Y+T+IDSLCK + A +L++EM KG+ PNV+TYS+LI
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C + A LL +M+ + I+P+VVT+N L+DA KEGK+ EA+ + MIK+ + PD+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TYSSL++G+C+ + +++A+ +F M + PNV +YN +I G CK K +DE + L E
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY++LI G + NA + +M G +I+TYN+ LD LCK
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K + + + + ++P + TYNI+++G+CK G+++D ++F L KG + YNT
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
MI+G C++GL +EA L KM ++G + D T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 212/376 (56%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ L++ + KM + + + L +++ GI + YN +I+ C+ +S A L +M+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
G P++VT S+L+ G+C ++ A+ L+D+MV PD +T+ L+ L K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA ++ M+++G +P++VTY +++G C +++ A ++ N M + NV Y+ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
LCK + D+ALNL EM+ + + PN +TYSSLI LC + S+A LL +M R
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+++T+N+ +DA K + + L ++I + I PD+ TY+ L++G C R+ +A+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
F+ + K N TYNT+ING CK DE + L +M G + + +T+ T+I F+
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 521 KGENDKAEKLLREMIA 536
+ D A+ + ++M++
Sbjct: 448 ARDCDNAQMVFKQMVS 463
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 188/338 (55%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D + N+M +I ++ ++ V+ SL K +H A++L +ME G+ PN +T +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+C C + + A +L+++++R +P+ +TFN LI GKL A + +D+++ +
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D TY++LING C + + A + + + P VV YNT+I+ CK K +
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ EM +G+ N VTY+ LI+GF A + +MV + P+++TYN L+D
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K GK+ +A + + + ++P + TY+ +++G C +V D+F +++ +GV P+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
V YN MI G C+ + +EA L +M + +P+ T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 207/377 (54%), Gaps = 1/377 (0%)
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
L NGL M +A ++ R + P++ +N ++ ++ K+K L +M G
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
IS N+ TY+ LI FC Q+ A+ LL +M+ +P +VT + L++ ++ +A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
++ M++ G +PD +T+++L+ G L N+ ++A + + M +RG PN+ +Y +++ GL
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
CK +D A NLL +M+ KI N V YS++ID LCK +A L EM +G ++
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
ITY+S + LC L+ +I++ I P++ T+N L+D K G++ +A++++ +
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ K+ + + +TY+++ING C DEA + M C + +T+ T+I+ +
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 524 NDKAEKLLREMIARDLL 540
D+ +L REM R L+
Sbjct: 416 IDEGVELFREMSQRGLV 432
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 295/552 (53%), Gaps = 54/552 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++DD + FF+ M++ R ++ NKV+ V+ AISL R+MEI I N + N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDT----------------------------- 123
ILI C C + + + S + K G+ PD
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 124 ---------------------ITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
ITFNTLI GLCL G++ A + ++ +G +D VTY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
T++NG+CKMG T++AL LL ++E IKP VV+Y+ IID LCK S A L+SEM+ K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
GI+PNV TY+ +I GFC G+ A LL +M+ + I+PDV+T+N L+ A KEGK+ EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ + M+ + + PD VTY+S++ G+C N + A+ +F+ MA +P+V ++N +I
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
C+ K VDE + LL E+ ++ N TY++LI G C+ ++ A +L EM G D
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
IT N L C+ +++ + L + I I D YNI++ G+CK ++ +A ++F
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
L G + TYN MI+G C + +A L KM+DNG D T+ T+I + G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 523 ENDKAEKLLREM 534
E DK+ +L+ EM
Sbjct: 622 EIDKSIELISEM 633
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 211/413 (51%), Gaps = 19/413 (4%)
Query: 139 LHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNT 198
L A+ F D ++ V +I +M + + A+ L R++E R I + +N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA----------- 247
+I C +S + + ++ G P+VVT++ L++G C+ ++ +A
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 248 ----IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+ L D+MV + P V+T+N L++ L EG+V EA ++ M+ +G+ DVVTY +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
+++G C + + A ++ + M + P+V Y+ +I LCK +A L EM +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I PN TY+ +IDG C G+ S+A LL +M R D++T+N+ + A K + +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
L +++ + I PD TYN ++ G CK R DA+ +F DL + + T+NT+I+
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVY 442
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
C+ DE + L+ ++ G + + T+ T+I E + A+ L +EMI+
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 179/350 (51%), Gaps = 17/350 (4%)
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
K + A D + M+ V + +I F + + AI L +M ++ I ++ ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF----- 321
NIL+ K+ + + + K G +PDVVT+++L+ G CL + +++A +F
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 322 ----------NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
+ M G+TP V ++N +I GLC V EA L+ +M + + + VTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKII 430
++++G+CK G +A LL +M D++ Y++ +D LCK GHH D L +++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY-LFSEML 323
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+KGI P++ TYN ++DG C GR DAQ + +D+ ++ N + T+N +I+ KEG
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA L +M D +T+ ++I + D A+ + M + D++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 123/251 (49%), Gaps = 15/251 (5%)
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L G ++ A D F+ M R N +I ++ D A++L +M+ +
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-------- 415
I N +++ LI C K+S + ++ G D++T+N+ L LC
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 416 ---GHHVDKG----IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
G+ V+ G +AL ++++ G+ P + T+N L++GLC GR+ +A + + KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
+++ TY T++NG+CK G AL L+SKME+ D + + II L + G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 529 KLLREMIARDL 539
L EM+ + +
Sbjct: 317 YLFSEMLEKGI 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M + +P ++ FN ++ + K + L R++ G+ N T N LI+ C +
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 104 TTSAFSVLANILKRGYHPDTIT-----------------------------------FNT 128
+A + ++ G PDTIT +N
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 129 LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG 188
+I G+C K+ A + G + D TY +I+G C A L +++ G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
+P YNT+I K + + +L SEM + G S + T
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ F M+ + P I N +L + + A+ L ++++ I + V N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+I+ C + A+ + ++ G PD T+N +I G C + A +
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
G + D TY TLI G K G+ + ++EL+ + G + +C+V
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRV 655
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ + F + +I + +N ++ + K A L + I G+ P+ T N+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I+ C + A + + G+ PD T+NTLI+G G++ ++++ ++ + G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLR 182
F D T +C++ E LR
Sbjct: 638 FSGDAFTIKMAEEIICRVSDEEIIENYLR 666
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 295/552 (53%), Gaps = 54/552 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++DD + FF+ M++ R ++ NKV+ V+ AISL R+MEI I N + N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDT----------------------------- 123
ILI C C + + + S + K G+ PD
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 124 ---------------------ITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
ITFNTLI GLCL G++ A + ++ +G +D VTY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
T++NG+CKMG T++AL LL ++E IKP VV+Y+ IID LCK S A L+SEM+ K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
GI+PNV TY+ +I GFC G+ A LL +M+ + I+PDV+T+N L+ A KEGK+ EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ + M+ + + PD VTY+S++ G+C N + A+ +F+ MA +P+V ++N +I
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
C+ K VDE + LL E+ ++ N TY++LI G C+ ++ A +L EM G D
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
IT N L C+ +++ + L + I I D YNI++ G+CK ++ +A ++F
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
L G + TYN MI+G C + +A L KM+DNG D T+ T+I + G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 523 ENDKAEKLLREM 534
E DK+ +L+ EM
Sbjct: 622 EIDKSIELISEM 633
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 210/414 (50%), Gaps = 19/414 (4%)
Query: 139 LHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNT 198
L A+ F D ++ V +I +M + + A+ L R++E R I + +N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA----------- 247
+I C +S + + ++ G P+VVT++ L++G C+ ++ +A
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 248 ----IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+ L D+MV + P V+T+N L++ L EG+V EA ++ M+ +G+ DVVTY +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
+++G C + + A ++ + M + P+V Y+ +I LCK +A L EM +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I PN TY+ +IDG C G+ S+A LL +M R D++T+N+ + A K + +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
L +++ + I PD TYN ++ G CK R DA+ +F DL + T+NT+I+
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMASP---DVVTFNTIIDVY 442
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
C+ DE + L+ ++ G + + T+ T+I E + A+ L +EMI+
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 179/350 (51%), Gaps = 17/350 (4%)
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
K + A D + M+ V + +I F + + AI L +M ++ I ++ ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF----- 321
NIL+ K+ + + + K G +PDVVT+++L+ G CL + +++A +F
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 322 ----------NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
+ M G+TP V ++N +I GLC V EA L+ +M + + + VTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKII 430
++++G+CK G +A LL +M D++ Y++ +D LCK GHH D L +++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY-LFSEML 323
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+KGI P++ TYN ++DG C GR DAQ + +D+ ++ N + T+N +I+ KEG
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA L +M D +T+ ++I + D A+ + M + D++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L G ++ A D F+ M R N +I ++ D A++L +M+ +
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-------- 415
I N +++ LI C K+S + ++ G D++T+N+ L LC
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 416 ---GHHVDKG----IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
G+ V+ G +AL ++++ G+ P + T+N L++GLC GR+ +A + + KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
+++ TY T++NG+CK G AL L+SKME+ D + + II L + G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 529 KLLREMIAR 537
L EM+ +
Sbjct: 317 YLFSEMLEK 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 85/223 (38%), Gaps = 35/223 (15%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
M + +P ++ FN ++ + K + L R++ G+ N T N LI+ C +
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 103 QTTSAFSVLANILKRGYHPDTIT-----------------------------------FN 127
+A + ++ G PDTIT +N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 128 TLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGR 187
+I G+C K+ A + G + D TY +I+G C A L +++
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G +P YNT+I K + + +L SEM + G S + T
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 77/185 (41%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ F M+ + P I N +L + + A+ L ++++ I + V N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+I+ C + A+ + ++ G PD T+N +I G C + A +
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D TY TLI G K G+ + ++EL+ + G + D + +L
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSF 661
Query: 213 FDLYS 217
D+ S
Sbjct: 662 SDMLS 666
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 298/532 (56%), Gaps = 41/532 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGIT-------- 85
+DD + F M++ R P I+EF+K+L+++ K + ISL QM+ GI+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 86 ---------------------------PNFVTLNILINCHCYLGQTTSAFSVLANILKRG 118
P+ VTLN L+N C+ + + A +++ +++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y PDT+TF TL+ GL H K A+ + ++ +G Q D VTY +INGLCK G+ + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL ++E I+ VV+YNTIID LCK K + AFDL+++M KGI P+V TY+ LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK-QGVKPD 297
C G+ A LL +M+ KNI+PD+V +N L+DA KEGK+ EA+ + M+K + PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
VV Y++L+ G+C V + +VF M++RG+ N +Y +I+G + + D A + +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
+M + + P+ +TY+ L+DGLC G V A + + M R DI+TY + ++ALCK
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
V+ G L + KG++P++ TY ++ G C+ G ++A +F ++ + G N+ TYN
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 478 TMINGLCKEGLFDEALT--LMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
T+I ++G DEA + L+ +M G D TF +++ + G DK+
Sbjct: 536 TLIRARLRDG--DEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKS 584
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 208/382 (54%), Gaps = 1/382 (0%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
V ++ L++ + KM + + + L +++ GI + Y+ I+ C+ +S A + +
Sbjct: 76 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGK 135
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G P++VT ++L+ GFC ++ +A+ L+D+MV PD VT+ LV L + K
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M+ +G +PD+VTY ++++G C E + A ++ N M + + +V YN
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I GLCK K +D+A +L +M+ + I P+ TY+ LI LC G+ S+A LL +M +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKII-DKGIQPDMCTYNILLDGLCKCGRIKDA 457
D++ +N+ +DA K + + L +++ K PD+ YN L+ G CK R+++
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
EVF+++ ++G N TY T+I+G + D A + +M +G D +T+ ++
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 518 LFEKGENDKAEKLLREMIARDL 539
L G + A + M RD+
Sbjct: 436 LCNNGNVETALVVFEYMQKRDM 457
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 175/330 (53%), Gaps = 1/330 (0%)
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A L+ +M+ P++V +S L+ + + I L ++M I ++ TY+I ++
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ ++ A +L M+K G P +VT +SL++G+C N +++A + + M G P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+ ++ +++GL + EA+ L+E M + P+ VTY ++I+GLCK G+ A LL
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
++M AD++ YN+ +D LCK H+D L K+ KGI+PD+ TYN L+ LC
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-EDNGCIHDPIT 510
GR DA + D+ +K N + +N +I+ KEG EA L +M + C D +
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 511 FETIISALFEKGENDKAEKLLREMIARDLL 540
+ T+I + ++ ++ REM R L+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 159/293 (54%)
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+L AIGL +MV P +V ++ L+ A+ K K ++ M G+ ++ TYS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
++ +C ++++ A + M + G P++ + N ++ G C + EA+ L+++M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
P+ VT+++L+ GL + K S A L++ M V+G D++TY + ++ LCK D
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
+ L+ K+ I+ D+ YN ++DGLCK + DA ++F + KG + +TYN +I+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
LC G + +A L+S M + D + F +I A ++G+ +AEKL EM+
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 147/308 (47%), Gaps = 1/308 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++DD FN+M I P + +N +++ L +S A L M I P+ V N
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGY-HPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
LI+ G+ A + ++K + PD + +NTLIKG C + ++ ++ ++
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+G + VTY TLI+G + + A + +++ G+ P ++ YN ++D LC V
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A ++ M + + ++VTY+ +I C G+++ L + LK + P+VVTY ++
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
++G EA + M + G P+ TY++L+ + + ++ M G
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 332 NVQSYNIM 339
+ ++ ++
Sbjct: 565 DASTFGLV 572
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 137/262 (52%)
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
K+ +A + M+K P +V +S L+ +N+ + + M G++ N+ +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
I I C+ + AL +L +M P+ VT +SL++G C ++S A L+D+M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
G D +T+ + + L + + + +AL+++++ KG QPD+ TY +++GLCK G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
+ + K + YNT+I+GLCK D+A L +KME G D T+ +IS
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 518 LFEKGENDKAEKLLREMIARDL 539
L G A +LL +M+ +++
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNI 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 78/185 (42%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ D+ F +M+ + P I+ +N +L L + TA+ + M+ + + VT
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I C G+ + + ++ +G P+ +T+ T++ G C G A ++
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + TY TLI + G A+ EL++ + G + + + L +L
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSF 585
Query: 213 FDLYS 217
D+ S
Sbjct: 586 LDMLS 590
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 266/457 (58%), Gaps = 35/457 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DD + F M Q R P IIEF+K+L+++ K + IS +MEI GI+ N T NI
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 94 LINCHCY----------------LG-------------------QTTSAFSVLANILKRG 118
LINC C LG + + A +++ +++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y PDT+TF TLI GL LH K A+ D ++ +G Q D VTY ++NGLCK G T+ AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL ++E I+ VV+Y+T+IDSLCK + A +L++EM KG+ PNV+TYS+LI
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+ A LL +M+ + I+P++VT++ L+DA K+GK+ +A+ + MIK+ + P++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TYSSL++G+C+++ + +A+ + M R+ PNV +YN +I G CK K VD+ + L E
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M ++ N VTY++LI G + NA + +M G +I+TYN LD LCK
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
+ K + + + + ++PD+ TYNI+++G+CK G+ K
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 216/378 (57%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ ++ L++ + KM + + + ++E GI + YN +I+ C+ +S A L +
Sbjct: 79 IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGK 138
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G P++VT ++L+ GFC ++ A+ L+D+MV PD VT+ L+ L K
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
EA ++ M+++G +PD+VTY ++++G C + + A ++ N M + NV Y+
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I LCK + D+ALNL EM+ + + PN +TYSSLI LC G+ S+A LL +M R
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+++T+++ +DA K + K L +++I + I P++ TY+ L++G C R+ +A+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ + + +K N TYNT+ING CK D+ + L +M G + + +T+ T+I
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 519 FEKGENDKAEKLLREMIA 536
F+ + D A+ + ++M++
Sbjct: 439 FQARDCDNAQMVFKQMVS 456
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 218/423 (51%), Gaps = 4/423 (0%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P I F+ L+ + K + F + + G + TY LIN C+ + AL L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
L ++ G +P +V N++++ C +S A L +M+ G P+ VT++ LI+G +
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
+ +A+ L+D MV + PD+VTY +V+ L K G A N+L M ++ +VV
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
YS+++D C + A ++F M +GV PNV +Y+ +I LC +A LL +M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
KI PN VT+S+LID K GK+ A +L +EM R +I TY+S ++ C +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ +++ +I K P++ TYN L++G CK R+ E+F+++ ++G N TY T+I
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA----EKLLREMIA 536
+G + D A + +M G + +T+ ++ L + G+ KA E L R +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 537 RDL 539
D+
Sbjct: 496 PDI 498
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 196/350 (56%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P+++ ++ ++ ++ K+ +M GIS N+ TY+ LI FC +L A+ L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L +M+ +PD+VT N L++ ++ +A ++ M++ G KPD VT+++L+ G L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
N+ ++A + + M +RG P++ +Y ++ GLCK D ALNLL +M+ KI N V
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
YS++ID LCK +A L EM +G ++ITY+S + LC L+ +I
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
++ I P++ T++ L+D K G++ A+++++++ K+ + N +TY+++ING C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA ++ M C+ + +T+ T+I+ + DK +L REM R L+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 164/280 (58%), Gaps = 6/280 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ D ++ N+M +I ++ ++ V+ SL K +H A++L +ME G+ PN +T +
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+C C G+ + A +L+++++R +P+ +TF+ LI GKL +A + +++++ +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 153 GFQLDQVTYATLINGLC---KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
+ TY++LING C ++G+ + LEL+ R + P VV YNT+I+ CK K V
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR---KDCLPNVVTYNTLINGFCKAKRV 409
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
+L+ EM +G+ N VTY+ LI+GF A + +MV + P+++TYNIL
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC 309
+D L K GK+ +A + + + ++PD+ TY+ +++G C
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%)
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+A + VM + P ++ +S L+ +N+ + M G++ N+ +YNI+I
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
C+ + AL LL +M P+ VT +SL++G C ++S+A L+D+M G
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
D +T+ + + L + + +ALI +++ +G QPD+ TY +++GLCK G A +
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
+ N Y+T+I+ LCK D+AL L ++ME+ G + IT+ ++IS L
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 521 KGENDKAEKLLREMIARDL 539
G A +LL +MI R +
Sbjct: 301 YGRWSDASRLLSDMIERKI 319
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%)
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
E++ A +F MA+ P++ ++ ++ + K+ D ++ E+M+ I N TY+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
LI+ C+ ++S A LL +M G DI+T NS L+ C G+ + +AL+ ++++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
G +PD T+ L+ GL + +A + + ++G + TY ++NGLCK G D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
L L++KME + + + T+I +L + D A L EM
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 323 AMARRGVTPNVQSYN---IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+ RR SY+ ++ GL I++ D+A+ L M + P+ + +S L+ +
Sbjct: 31 SFCRRRAFSGKTSYDYREVLRTGLSDIEL-DDAIGLFGVMAQSRPFPSIIEFSKLLSAIA 89
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
K K ++M + G ++ TYN ++ C+ + +AL+ K++ G +PD+
Sbjct: 90 KMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
T N LL+G C RI DA + + + GY + T+ T+I+GL EA+ L+ +M
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
GC D +T+ +++ L ++G+ D A LL +M A
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 263/469 (56%), Gaps = 35/469 (7%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+D + F RM+ R P II+F ++L+ + K Y ISL QM+I GI P T NI+
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++C +CL + RA F ++ GF
Sbjct: 125 MHC-----------------------------------VCLSSQPCRASCFLGKMMKLGF 149
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D VT+ +L+NG C + E A+ L +I G G KP VV Y T+I LCK + ++HA +
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L+++M G PNVVTY+AL+ G C +G+ A LL +M+ + I+P+V+T+ L+DA
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
K GK+ EAK + VMI+ V PDV TY SL++G C+ +++AR +F M R G PN
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
Y +I+G CK K V++ + + EM + ++ N +TY+ LI G C G+ A E+ ++M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
R P DI TYN LD LC V+K + + + + + + ++ TY I++ G+CK G++
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
+DA ++F LF KG N TY TMI+G C+ GL EA +L KM+++G
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 187/338 (55%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D ++ F+++L M P ++ + ++ L K +H + A+ L QM G PN VT N
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ C +G+ A +L +++KR P+ ITF LI GKL A + ++ ++
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D TY +LINGLC G + A ++ +E G P V+Y T+I CK K V
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++ EM KG+ N +TY+ LI G+C+VG+ A + ++M + PD+ TYN+L+D L
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
GKV +A + M K+ + ++VTY+ ++ G C + +V A D+F ++ +G+ PNV
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
+Y MI G C+ ++ EA +L ++M + +PN+ Y
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 225/448 (50%), Gaps = 20/448 (4%)
Query: 107 AFSVLANILKRGYH--------------------PDTITFNTLIKGLCLHGKLHRALQFH 146
AFS IL+ G H P I F L+ + + +
Sbjct: 47 AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
+ + G T +++ +C Q A L ++ G +P +V + ++++ C
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
+ A L+ +++ G PNVVTY+ LI C L A+ L ++M P+VVTY
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
N LV L + G+ +A +L M+K+ ++P+V+T+++L+D + V ++ +A++++N M +
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
V P+V +Y +I GLC ++DEA + M+ PN+V Y++LI G CK+ +V +
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
++ EM +G A+ ITY + C D + ++ + PD+ TYN+LLD
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 447 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
GLC G+++ A +F+ + K+ ++N TY +I G+CK G ++A L + G
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 507 DPITFETIISALFEKGENDKAEKLLREM 534
+ IT+ T+IS +G +A+ L ++M
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 204/423 (48%), Gaps = 11/423 (2%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY---------ATLINGLCKMGQTEA 176
F +++KG LH HR LQ + A L + L NGL + Q
Sbjct: 9 FASIVKGFHLHSHRHR-LQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNL-QFND 66
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
AL+L R+ P+++ + ++ + K+ L+ +M GI P + T + +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
C+ Q +A L +M+ +PD+VT+ L++ ++ +A + ++ G KP
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+VVTY++L+ C +N A ++FN M G PNV +YN ++ GLC+I +A LL
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+M +I PN +T+++LID K GK+ A EL + M D+ TY S ++ LC
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+D+ + + G P+ Y L+ G CK R++D ++F ++ +KG N TY
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+I G C G D A + ++M D T+ ++ L G+ +KA + M
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 537 RDL 539
R++
Sbjct: 427 REM 429
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 263/479 (54%), Gaps = 35/479 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D + F+ M++ R P I++FN++L+++VK K Y ISL ++ME+ GI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGI--------- 116
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
D TFN +I C ++ AL +L G
Sbjct: 117 --------------------------RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
++ D+VT +L+NG C+ + A+ L+ ++ G KP +V YN IIDSLCK K V+ AF
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
D + E+ KGI PNVVTY+AL+ G C + A LL +M+ K I P+V+TY+ L+DA
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K GKV EAK + M++ + PD+VTYSSL++G CL + +++A +F+ M +G +V
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
SYN +I G CK K V++ + L EM ++ N VTY++LI G + G V A E +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M G DI TYN L LC ++K + + + + + + D+ TY ++ G+CK G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+++A +F L KG + TY TM++GLC +GL E L +KM+ G + + T
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 230/434 (52%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
A + ++++K P + FN L+ + K + + G + D T+ +IN
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
C Q AL +L ++ G +P V ++++ C+ VS A L +M+ G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
++V Y+A+I C ++ A E+ K I P+VVTY LV+ L + +A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
+ MIK+ + P+V+TYS+L+D + +V +A+++F M R + P++ +Y+ +I GLC
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
+DEA + + M + + + V+Y++LI+G CK +V + +L EM RG ++ +TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
N+ + + VDK ++ GI PD+ TYNILL GLC G ++ A +F+D+ K
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
+ +L+ TY T+I G+CK G +EA +L + G D +T+ T++S L KG +
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 527 AEKLLREMIARDLL 540
E L +M L+
Sbjct: 489 VEALYTKMKQEGLM 502
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 196/361 (54%), Gaps = 8/361 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V D VS ++M+++ P I+ +N ++ SL KTK + A +++E GI PN VT
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+N C + + A +L++++K+ P+ IT++ L+ +GK+ A + ++++
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D VTY++LINGLC + + A ++ + +G VV YNT+I+ CK K V
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ EM +G+ N VTY+ LI GF G + +A +M I PD+ TYNIL+ L
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
G++ +A + M K+ + D+VTY++++ G C +V +A +F +++ +G+ P++
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y M+ GLC ++ E L +M E ++ N T S G ++ + EL+ +
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKK 522
Query: 394 M 394
M
Sbjct: 523 M 523
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 189/326 (57%)
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
++ A DL+S+M+ P++V ++ L+ + + I L +M + I D+ T+NI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
+++ +V A ++L M+K G +PD VT SL++G+C N V+ A + + M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
P++ +YN +I LCK K V++A + +E++ + I PN VTY++L++GLC + + S+A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
LL +M + ++ITY++ LDA K V + L ++++ I PD+ TY+ L++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
C RI +A ++F + KG + +YNT+ING CK ++ + L +M G + +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 509 ITFETIISALFEKGENDKAEKLLREM 534
+T+ T+I F+ G+ DKA++ +M
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 162/298 (54%)
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+L AI L +MV P +V +N L+ A+ K K ++ M G++ D+ T++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
+++ +C +V+ A + M + G P+ + ++ G C+ V +A++L+++M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
P+ V Y+++ID LCKT +V++A++ E+ +G +++TY + ++ LC
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
L+ +I K I P++ TY+ LLD K G++ +A+E+F+++ + + + TY+++ING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
LC DEA + M GC+ D +++ T+I+ + + KL REM R L+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 10/176 (5%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+VD FF++M I+P I +N +L L A+ + M+ + + VT
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I C G+ A+S+ ++ +G PD +T+ T++ GLC G LH + + +
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
G + T + G + EL++++ G P+++ I +CK L
Sbjct: 500 GLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPSLL--KDIKSGVCKKAL 545
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 260/470 (55%), Gaps = 35/470 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DD++ F M+Q R P I +F+++L+++ K K Y I L QM++ GI N T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+NC C Q L AL F ++ G
Sbjct: 122 LLNCFCRCSQ-----------------------------------LSLALSFLGKMIKLG 146
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ VT+ +L+NG C+ + AL + ++ G G KP VV+YNTIID LCK K V +A
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
DL + M GI P+VVTY++LI G C G+ A ++ M + I PDV T+N L+DA
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
KEG+V EA+ MI++ + PD+VTYS L+ G C+ + +++A ++F M +G P+V
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y+I+I G CK K V+ + L EM ++ N VTY+ LI G C+ GK++ A E+
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M G +IITYN L LC ++K + ++ + G+ D+ TYNI++ G+CK G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
+ DA +++ L +G + WTY TM+ GL K+GL EA L KM+++G
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 221/414 (53%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P F+ L+ + K + + + G + T L+N C+ Q AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
L ++ G +P++V + ++++ C+ V A ++ +M+ G PNVV Y+ +I G C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
Q+ A+ LL+ M I PDVVTYN L+ L G+ +A M++ M K+ + PDV T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
+++L+D V++A + + M RR + P++ +Y+++IYGLC +DEA + M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ P+ VTYS LI+G CK+ KV + +L EM RG + +TY + C+ ++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ ++++ G+ P++ TYN+LL GLC G+I+ A + D+ K G + + TYN +I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
G+CK G +A + + G + D T+ T++ L++KG +A+ L R+M
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 189/335 (56%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V D + F++M+ M P ++ +N ++ L K+K A+ L +ME GI P+ VT N
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ C G+ + A +++ + KR +PD TFN LI G++ A +F+++++ +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D VTY+ LI GLC + + A E+ + +G P VV Y+ +I+ CK K V H
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ EM +G+ N VTY+ LI G+C G+L A + MV + P+++TYN+L+ L
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
GK+ +A +LA M K G+ D+VTY+ ++ G C EV A D++ ++ +G+ P++
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
+Y M+ GL K + EA L +M + I+PN+
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 180/324 (55%)
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+ DL+ M+ P++ +S L+ + + I L ++M + I ++ T NIL++
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ ++ A + L MIK G +P +VT+ SL++G+C + V A +F+ M G P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV YN +I GLCK K VD AL+LL M+ + I P+ VTY+SLI GLC +G+ S+A ++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
M R D+ T+N+ +DA K V + +++I + + PD+ TY++L+ GLC
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
R+ +A+E+F + KG + TY+ +ING CK + + L +M G + + +T+
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 512 ETIISALFEKGENDKAEKLLREMI 535
+I G+ + AE++ R M+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMV 388
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 152/298 (51%)
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+L ++ L MV P + ++ L+ A+ K K + M G+ ++ T +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
L++ +C ++++ A M + G P++ ++ ++ G C+ V +AL + ++M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
PN V Y+++IDGLCK+ +V NA +LL+ M G D++TYNS + LC
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
++ + + I PD+ T+N L+D K GR+ +A+E ++++ ++ + + TY+ +I G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
LC DEA + M GC D +T+ +I+ + + + KL EM R ++
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
+RR + N Y M+ + +D++L+L M + +P+ +S L+ + K
Sbjct: 37 CFSRRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMK 95
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
K L ++M + G P ++ T N L+ C+ + ++ + K+I G +P + T+
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFG 155
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 502
LL+G C+ R+ DA +F + GY N YNT+I+GLCK D AL L+++ME +
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
G D +T+ ++IS L G A +++ M R++
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 315 bits (806), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 276/500 (55%), Gaps = 16/500 (3%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
F+NRML + +++ N + LV+ H +M + GI P+ T N+LI C
Sbjct: 156 FYNRMLNL-----LVDGNSL--KLVEISH--------AKMSVWGIKPDVSTFNVLIKALC 200
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
Q A +L ++ G PD TF T+++G G L AL+ + ++ G V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGR-GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ +++G CK G+ E AL ++ + + G P +NT+++ LCK V HA ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ +G P+V TY+++I G C +G++K+A+ +LD+M+ ++ P+ VTYN L+ L KE +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
V EA + V+ +G+ PDV T++SL+ G CL A ++F M +G P+ +YN+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I LC +DEALN+L++M+ + +TY++LIDG CK K A E+ DEM V G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+ +TYN+ +D LCK V+ L+ ++I +G +PD TYN LL C+ G IK A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ Q + G + TY T+I+GLCK G + A L+ ++ G P + +I L
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 519 FEKGENDKAEKLLREMIARD 538
F K + +A L REM+ ++
Sbjct: 621 FRKRKTTEAINLFREMLEQN 640
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 245/459 (53%), Gaps = 38/459 (8%)
Query: 49 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAF 108
+ P F V+ ++ A+ + QM G + + V++N++++ C G+ A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 109 SVLANILKR-GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLING 167
+ + + + G+ PD TFNTL+ GLC G + A++ D +L +G+ D TY ++I+G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
LCK+G+ + A+E+L ++ R P V YNT+I +LCK V A +L + +KGI P+
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
V T+++LI G C+ + A+ L +EM K +PD TYN+L+D+L +GK+ EA NML
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M G V+TY++L+DG+C N+ +A ++F+ M GV+ N +YN +I GLCK +
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 348 MVDEALNLLEEMDYEKIIPNK-----------------------------------VTYS 372
V++A L+++M E P+K VTY
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+LI GLCK G+V A +LL + ++G YN + L + + I L ++++++
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 433 G-IQPDMCTYNILLDGLCK-CGRIKDAQEVFQDLFKKGY 469
PD +Y I+ GLC G I++A + +L +KG+
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 186/350 (53%), Gaps = 13/350 (3%)
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK 257
++DSL S A L++ K SP Y ++ G +L++M
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 258 NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYSS----LMDGYCL-V 311
+ T+ IL+++ + E +++ MI + G+KPD Y+ L+DG L +
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 312 NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
E++ A+ M+ G+ P+V ++N++I LC+ + A+ +LE+M ++P++ T+
Sbjct: 173 VEISHAK-----MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
++++ G + G + A + ++M G ++ N + CK V+ + I+++ +
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 432 K-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+ G PD T+N L++GLCK G +K A E+ + ++GY+ + +TYN++I+GLCK G
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA+ ++ +M C + +T+ T+IS L ++ + ++A +L R + ++ +L
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 276/483 (57%), Gaps = 5/483 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F ML +I P + F V+ + +A+SL R M G PN V LI+
Sbjct: 205 FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSK 264
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+ A +L + G PD TFN +I GLC +++ A + + +L +GF D +T
Sbjct: 265 CNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y L+NGLCK+G+ +AA +L RI KP +V++NT+I + A + S+M+
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 221 AK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
GI P+V TY++LIYG+ G + A+ +L +M K P+V +Y ILVD K GK+
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
EA N+L M G+KP+ V ++ L+ +C + + +A ++F M R+G P+V ++N +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I GLC++ + AL LL +M E ++ N VTY++LI+ + G++ A +L++EM +G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
P D ITYNS + LC+ VDK +L +K++ G P + NIL++GLC+ G +++A E
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+++ +G + T+N++INGLC+ G ++ LT+ K++ G D +TF T++S L
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 520 EKG 522
+ G
Sbjct: 681 KGG 683
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 267/501 (53%), Gaps = 9/501 (1%)
Query: 44 MLQMR----ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
ML+MR P +N VL LV + A ++ M I P T +++ C
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
+ + SA S+L ++ K G P+++ + TLI L +++ ALQ +++ G D
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
T+ +I GLCK + A +++ R+ RG P + Y +++ LCK+ V A DL+ +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILVDALGKEGK 278
P +V ++ LI+GF G+L A +L +MV I PDV TYN L+ KEG
Sbjct: 349 P----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
V A +L M +G KP+V +Y+ L+DG+C + ++++A +V N M+ G+ PN +N
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I CK + EA+ + EM + P+ T++SLI GLC+ ++ +A LL +M G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
A+ +TYN+ ++A + + + L+ +++ +G D TYN L+ GLC+ G + A+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+F+ + + G+ +N + N +INGLC+ G+ +EA+ +M G D +TF ++I+ L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 519 FEKGENDKAEKLLREMIARDL 539
G + + R++ A +
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGI 665
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 245/459 (53%), Gaps = 5/459 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + M M P FN V+ L K + A + +M I G P+ +T
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ-FHDDVLAQ 152
L+N C +G+ +A + I K P+ + FNTLI G HG+L A D V +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D TY +LI G K G ALE+L + +G KP V Y ++D CK+ + A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ +EM A G+ PN V ++ LI FC ++ +A+ + EM K PDV T+N L+
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L + +++ A +L MI +GV + VTY++L++ + E+ +AR + N M +G +
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+YN +I GLC+ VD+A +L E+M + P+ ++ + LI+GLC++G V A E
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM +RG DI+T+NS ++ LC+ ++ G+ + +K+ +GI PD T+N L+ LCK G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 491
+ DA + + + G+ N+ T++ ++ + + D
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 209/429 (48%), Gaps = 10/429 (2%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ GY + LI L +G+ + + +G + + +++ K G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 176 AALELLRRIEGRGI---KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
L+ +E R + +PT YN +++ L A +++ +M+++ I P + T+
Sbjct: 164 QTTRLM--LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 221
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
++ FC V ++ A+ LL +M P+ V Y L+ +L K +V EA +L M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
G PD T++ ++ G C + +N+A + N M RG P+ +Y ++ GLCKI VD A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR-GQPADIITYNSFLD 411
+L Y P V +++LI G G++ +A +L +M G D+ TYNS +
Sbjct: 342 KDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
K V + ++ + +KG +P++ +Y IL+DG CK G+I +A V ++ G
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
N +N +I+ CKE EA+ + +M GC D TF ++IS L E E A LL
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 532 REMIARDLL 540
R+MI+ ++
Sbjct: 518 RDMISEGVV 526
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 274/503 (54%), Gaps = 38/503 (7%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ + F M++ R P II+F K+L + K K + I+L ++I G++ + T N+L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+NC C + + A F ++ GF
Sbjct: 114 MNC-----------------------------------FCQSSQPYLASSFLGKMMKLGF 138
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D VT+ +LING C + E A+ ++ ++ GIKP VVMY TIIDSLCK V++A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L+ +M GI P+VV Y++L+ G C G+ + A LL M + I PDV+T+N L+DA
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
KEGK +A+ + MI+ + P++ TY+SL++G+C+ V++AR +F M +G P+V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+Y +I G CK K VD+A+ + EM + + N +TY++LI G + GK + A E+ M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK---GIQPDMCTYNILLDGLCKC 451
RG P +I TYN L LC V K + + + + + G+ P++ TYN+LL GLC
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G+++ A VF+D+ K+ ++ TY +I G+CK G A+ L + G + +T+
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 512 ETIISALFEKGENDKAEKLLREM 534
T+IS LF +G +A L R+M
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKM 521
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 200/368 (54%), Gaps = 3/368 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ +S N+M++M I P ++ + ++ SL K H + A+SL QME GI P+ V
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+N C G+ A S+L + KR PD ITFN LI GK A + +++++
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ TY +LING C G + A ++ +E +G P VV Y ++I+ CK K V A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++ EM KG++ N +TY+ LI GF VG+ A + MV + + P++ TYN+L+ L
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 274 GKEGKVREAKNMLAVMIKQ---GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
GKV++A + M K+ GV P++ TY+ L+ G C ++ KA VF M +R +
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+ +Y I+I G+CK V A+NL + + + PN VTY+++I GL + G A L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 391 LDEMHVRG 398
+M G
Sbjct: 518 FRKMKEDG 525
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 204/416 (49%), Gaps = 18/416 (4%)
Query: 141 RALQFHDDVLAQGFQLDQVTYATLI-----------------NGLCKMGQTEAALELLRR 183
R Q H + L +G ++++ L+ NGL + EA
Sbjct: 4 RFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHM 63
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
+E R + P+++ + +++ + K+K +L + G+S ++ T + L+ FC Q
Sbjct: 64 VESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQ 122
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
A L +M+ +PD+VT+ L++ ++ EA +M+ M++ G+KPDVV Y++
Sbjct: 123 PYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTT 182
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
++D C VN A +F+ M G+ P+V Y ++ GLC +A +LL M K
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I P+ +T+++LID K GK +A EL +EM +I TY S ++ C VD+
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+ + KG PD+ Y L++G CKC ++ DA ++F ++ +KG N TY T+I G
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ G + A + S M G + T+ ++ L G+ KA + +M R++
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 263/471 (55%), Gaps = 38/471 (8%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+++ + F +M+Q R P I++F+KVL+ + K+K+Y ISL ME+ GI + + N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+INC LC + AL ++
Sbjct: 109 IVINC-----------------------------------LCRCSRFVIALSVVGKMMKF 133
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G++ D VT ++LING C+ + A++L+ ++E G +P VV+YNTIID CK+ LV+ A
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ M G+ + VTY++L+ G C G+ A L+ +MV+++I P+V+T+ ++D
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
KEGK EA + M ++ V PDV TY+SL++G C+ V++A+ + + M +G P+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YN +I G CK K VDE L EM ++ + +TY+++I G + G+ A E+
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M R +I TY+ L LC V+K + L + + I+ D+ TYNI++ G+CK G
Sbjct: 374 RMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
++DA ++F+ L KG + +Y TMI+G C++ +D++ L KM+++G
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 222/420 (52%), Gaps = 3/420 (0%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P + F+ ++ + + + G D +Y +IN LC+ + AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
+ ++ G +P VV +++I+ C+ V A DL S+M G P+VV Y+ +I G C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
+G + A+ L D M + D VTYN LV L G+ +A ++ M+ + + P+V+T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
+++++D + + ++A ++ M RR V P+V +YN +I GLC VDEA +L+ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ +P+ VTY++LI+G CK+ +V +L EM RG D ITYN+ + + D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ ++ + P++ TY+ILL GLC R++ A +F+++ K L+ TYN +I
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+G+CK G ++A L + G D +++ T+IS K + DK++ L R+M LL
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 183/324 (56%)
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
DL+ +MI P++V +S ++ I L M + I D+ +YNI+++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+ + A +++ M+K G +PDVVT SSL++G+C N V A D+ + M G P+V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
YN +I G CKI +V++A+ L + M+ + + + VTY+SL+ GLC +G+ S+A L+ +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M +R ++IT+ + +D K + + L +++ + + PD+ TYN L++GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
+ +A+++ + KG + TYNT+ING CK DE L +M G + D IT+ T
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 514 IISALFEKGENDKAEKLLREMIAR 537
II F+ G D A+++ M +R
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 172/327 (52%), Gaps = 6/327 (1%)
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQ-----LKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++ KG +P +V + + +G + L++ I L +M+ P +V ++ ++ +
Sbjct: 21 LLQKG-NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKI 79
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K ++ M G+ D+ +Y+ +++ C + A V M + G P+V
Sbjct: 80 AKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDV 139
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+ + +I G C+ V +A++L+ +M+ P+ V Y+++IDG CK G V++A EL D
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M G AD +TYNS + LC L++ ++ + I P++ T+ ++D K G+
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
+A ++++++ ++ + + +TYN++INGLC G DEA ++ M GC+ D +T+ T
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 514 IISALFEKGENDKAEKLLREMIARDLL 540
+I+ + D+ KL REM R L+
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLV 346
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 264/469 (56%), Gaps = 35/469 (7%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
DD S F MLQ R P I++F +VLT + K + I L +ME GI+ + + IL
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+C C + + A ++L ++K G+ P +T
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTL---------------------------- 152
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+L+NG C+ + + A+ L+ ++G G P VV+YNT+I+ LCK + +++A +
Sbjct: 153 -------GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
++ M KGI + VTY+ LI G G+ A LL +MV + IDP+V+ + L+D
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
KEG + EA+N+ MI++ V P+V TY+SL++G+C+ + A+ +F+ M +G P+V
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+YN +I G CK K V++ + L EM Y+ ++ + TY++LI G C+ GK++ A ++ + M
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
G DI+TYN LD LC ++K + +++ + + D+ TYNI++ GLC+ ++
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
K+A +F+ L +KG + Y TMI+GLC++GL EA L +M+++G
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 219/428 (51%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
AFS+ +L+ P + F ++ + K + + + G D ++ LI+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
C+ + AL LL ++ G +P++V ++++ C+ A L M G P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
NVV Y+ +I G C L A+ + M K I D VTYN L+ L G+ +A +L
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M+K+ + P+V+ +++L+D + + +AR+++ M RR V PNV +YN +I G C
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
+ +A + + M + P+ VTY++LI G CK+ +V + +L EM +G D TY
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
N+ + C+ ++ + +++D G+ PD+ TYNILLD LC G+I+ A + +DL K
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
+++ TYN +I GLC+ EA L + G D I + T+IS L KG +
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 527 AEKLLREM 534
A+KL R M
Sbjct: 483 ADKLCRRM 490
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 174/336 (51%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ VS + M P ++ +N V+ L K + + A+ + ME GI + VT N LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ G+ T A +L +++KR P+ I F LI G L A + +++ +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ TY +LING C G A + + +G P VV YNT+I CK K V L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ EM +G+ + TY+ LI+G+C G+L A + + MV + PD+VTYNIL+D L
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
GK+ +A M+ + K + D++TY+ ++ G C +++ +A +F ++ R+GV P+ +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
Y MI GLC+ + EA L M + +P++ Y
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 174/324 (53%)
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
AF L+ EM+ P++V ++ ++ + + I L +M I D+ ++ IL+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ ++ A +L M+K G +P +VT SL++G+C N +A + ++M G P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV YN +I GLCK + ++ AL + M+ + I + VTY++LI GL +G+ ++A LL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+M R ++I + + +D K ++ + L K++I + + P++ TYN L++G C
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G + DA+ +F + KG + TYNT+I G CK ++ + L +M G + D T+
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 512 ETIISALFEKGENDKAEKLLREMI 535
T+I + G+ + A+K+ M+
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMV 386
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 162/305 (53%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++++ + F M + I + +N +++ L + ++ A L R M I PN +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ G A ++ +++R P+ T+N+LI G C+HG L A D ++++
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D VTY TLI G CK + E ++L + +G+ YNT+I C+ ++ A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ M+ G+SP++VTY+ L+ C G++++A+ +++++ +D D++TYNI++
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L + K++EA + + ++GVKPD + Y +++ G C +A + M G P+
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 333 VQSYN 337
+ Y+
Sbjct: 499 ERIYD 503
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 148/298 (49%)
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+ A L EM+ P +V + ++ + K K + M G+ D+ +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
L+ +C + ++ A + M + G P++ + ++ G C+ EA++L++ MD
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
+PN V Y+++I+GLCK ++NA E+ M +G AD +TYN+ + L
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
L++ ++ + I P++ + L+D K G + +A+ +++++ ++ N +TYN++ING
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
C G +A + M GC D +T+ T+I+ + + KL EM + L+
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 266/487 (54%), Gaps = 3/487 (0%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
+E N L +V+T M G P+ + LI C LG+T A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ G PD IT+N +I G C G+++ AL D + D VTY T++ LC G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
+ A+E+L R+ R P V+ Y +I++ C+ V HA L EM +G +P+VVTY+
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
L+ G C G+L +AI L++M P+V+T+NI++ ++ G+ +A+ +LA M+++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
P VVT++ L++ C + +A D+ M + G PN SYN +++G CK K +D A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
LE M P+ VTY++++ LCK GKV +A E+L+++ +G +ITYN+ +D L
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
K K I L+ ++ K ++PD TY+ L+ GL + G++ +A + F + + G N
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
T+N+++ GLCK D A+ + M + GC + ++ +I L +G +A +LL E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 534 MIARDLL 540
+ + L+
Sbjct: 580 LCNKGLM 586
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 253/470 (53%), Gaps = 3/470 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ F M+ P II ++ + A + +E +G P+ +T N+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I+ +C G+ +A SVL + PD +T+NT+++ LC GKL +A++ D +L +
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D +TY LI C+ A++LL + RG P VV YN +++ +CK + A
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++M + G PNV+T++ ++ C G+ A LL +M+ K P VVT+NIL++ L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
++G + A ++L M + G +P+ ++Y+ L+ G+C ++++A + M RG P++
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+YN M+ LCK V++A+ +L ++ + P +TY+++IDGL K GK A +LLDE
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M + D ITY+S + L + VD+ I + GI+P+ T+N ++ GLCK +
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
A + + +G N +Y +I GL EG+ EAL L++++ + G
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 232/412 (56%), Gaps = 3/412 (0%)
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
+ + N ++ + G+L +F ++++ G D + TLI G C++G+T A ++L
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
+EG G P V+ YN +I CK +++A + M +SP+VVTY+ ++ C
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDS 217
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
G+LKQA+ +LD M+ ++ PDV+TY IL++A ++ V A +L M +G PDVVTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+ L++G C +++A N M G PNV ++NI++ +C +A LL +M
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+ P+ VT++ LI+ LC+ G + A ++L++M G + ++YN L CK +D+
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
I +++++ +G PD+ TYN +L LCK G+++DA E+ L KG + TYNT+I+
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
GL K G +A+ L+ +M D IT+ +++ L +G+ D+A K E
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 220/394 (55%), Gaps = 3/394 (0%)
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
H + F L+ V + + + G+ E + L + G P ++ T+I C+
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
+ A + + G P+V+TY+ +I G+C G++ A+ +LD M ++ PDVVT
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
YN ++ +L GK+++A +L M+++ PDV+TY+ L++ C + V A + + M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
RG TP+V +YN+++ G+CK +DEA+ L +M PN +T++ ++ +C TG+
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
+A +LL +M +G ++T+N ++ LC+ + + I +++K+ G QP+ +YN LL
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
G CK ++ A E + + +G + TYNTM+ LCK+G ++A+ +++++ GC
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMIARDL 539
IT+ T+I L + G+ KA KLL EM A+DL
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 158/296 (53%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ + F N M P +I N +L S+ T + A L M G +P+ VT NI
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN C G A +L + + G P+++++N L+ G C K+ RA+++ + ++++G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D VTY T++ LCK G+ E A+E+L ++ +G P ++ YNT+ID L K A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L EM AK + P+ +TYS+L+ G G++ +AI E I P+ VT+N ++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
K + A + L MI +G KP+ +Y+ L++G +A ++ N + +G+
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 250/434 (57%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+D + F M+ + P I++F ++LT+ + Y T I S++ME+ GI+ + + IL
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+C C + + A SVL ++K GY P +TF +L+ G CL ++ A ++ G+
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ + V Y TLI+GLCK G+ ALELL +E +G+ VV YNT++ LC S A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
+ +M+ + I+P+VVT++ALI F G L +A L EM+ ++DP+ VTYN +++ L
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
G++ +AK +M +G P+VVTY++L+ G+C V++ +F M+ G ++
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+YN +I+G C++ + AL++ M ++ P+ +T+ L+ GLC G++ +A D+M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
+ I+ YN + LCK V+K L ++ +G++PD TY I++ GLCK G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 455 KDAQEVFQDLFKKG 468
++A E+ + + ++G
Sbjct: 473 READELIRRMKEEG 486
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 217/428 (50%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
AF++ ++ P + F L+ + + F + G D ++ LI+
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
C+ + AL +L ++ G +P++V + +++ C V + AF L M+ G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
NVV Y+ LI G C G+L A+ LL+EM K + DVVTYN L+ L G+ +A ML
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M+K+ + PDVVT+++L+D + +++A++++ M + V PN +YN +I GLC
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
+ +A + M + PN VTY++LI G CK V +L M G ADI TY
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
N+ + C+ + + + ++ + + PD+ T+ ILL GLC G I+ A F D+ +
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
+ YN MI+GLCK ++A L ++ G D T+ +I L + G +
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474
Query: 527 AEKLLREM 534
A++L+R M
Sbjct: 475 ADELIRRM 482
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 181/326 (55%)
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
AF L+ EM+ P++V ++ L+ + + + I +M L I D+ ++ IL+
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ ++ A ++L M+K G +P +VT+ SL+ G+CLVN + A + M + G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV YN +I GLCK ++ AL LL EM+ + + + VTY++L+ GLC +G+ S+A +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+M R D++T+ + +D K ++D+ L K++I + P+ TYN +++GLC
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
GR+ DA++ F + KG N TYNT+I+G CK + DE + L +M G D T+
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 512 ETIISALFEKGENDKAEKLLREMIAR 537
T+I + G+ A + M++R
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 174/332 (52%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ D S M++ P ++ +N ++ L K + A+ L +ME G+ + VT N
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ CY G+ + A +L +++KR +PD +TF LI G L A + + +++
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ VTY ++INGLC G+ A + + +G P VV YNT+I CK ++V
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ M +G + ++ TY+ LI+G+C VG+L+ A+ + MV + + PD++T+ IL+ L
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
G++ A M + +V Y+ ++ G C ++V KA ++F + GV P+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
++Y IMI GLCK EA L+ M E II
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 15 NPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAIS 74
NP+ N+D+ + M+Q + P + +N ++ L A
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 75 LSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLC 134
M G PN VT N LI+ C + + G++ D T+NTLI G C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 135 LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVV 194
GKL AL ++++ D +T+ L++GLC G+ E+AL + +V
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
YN +I LCK V A++L+ + +G+ P+ TY+ +I G C G ++A L+ M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 97/190 (51%)
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
++A L EM + + +P+ V ++ L+ + +M + G D+ ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+ C+ + ++++ K++ G +P + T+ LL G C RI DA + + K GY
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
N YNT+I+GLCK G + AL L+++ME G D +T+ T+++ L G A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 530 LLREMIARDL 539
+LR+M+ R +
Sbjct: 233 MLRDMMKRSI 242
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 272/506 (53%), Gaps = 2/506 (0%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
VS M + + P + +N V+ + K A+ L+ +M+ +G + + VT ILI+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
C G+ A L + G D + + +LI+G C G+L R D+VL +G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
+TY TLI G CK+GQ + A E+ + RG++P V Y +ID LC V A L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+ MI K PN VTY+ +I C G + A+ +++ M + PD +TYNIL+ L +
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 277 GKVREAKNMLAVMIKQG--VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
G + EA +L +M+K PDV++Y++L+ G C N +++A D+++ + + +
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+ NI++ K V++A+ L +++ KI+ N TY+++IDG CKTG ++ A LL +M
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
V + YN L +LCK +D+ L +++ PD+ ++NI++DG K G I
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 514
K A+ + + + G + + +TY+ +IN K G DEA++ KM D+G D +++
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 515 ISALFEKGENDKAEKLLREMIARDLL 540
+ +GE DK +L+++++ +D++
Sbjct: 641 LKYCISQGETDKLTELVKKLVDKDIV 666
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 262/480 (54%), Gaps = 2/480 (0%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N ++ LV+++++ A S R+M T NFV+L+ L+ C+ + +T AF VLA +LK
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
RG+ + N L+KGLC + + +A+ ++ D +Y T+I G C+ + E
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
ALEL ++G G ++V + +ID+ CK + A EM G+ ++V Y++LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
GFC G+L + L DE++ + P +TYN L+ K G+++EA + MI++GV+P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+V TY+ L+DG C V + +A + N M + PN +YNI+I LCK +V +A+ ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ--PADIITYNSFLDALC 414
E M + P+ +TY+ L+ GLC G + A +LL M D+I+YN+ + LC
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
K + + + + + +++K D T NILL+ K G + A E+++ + N+
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
TY MI+G CK G+ + A L+ KM + + ++S+L ++G D+A +L EM
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 200/394 (50%), Gaps = 17/394 (4%)
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH---- 211
L+ Y+ L+N +TE L L +K V ++ +DS + +
Sbjct: 24 LNPRVYSKLVNAF---SETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMA 80
Query: 212 ----------AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP 261
AF Y +M+ N V+ S L+ + + + A G+L M+ +
Sbjct: 81 KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
+V +NIL+ L + + +A ++L M + + PDV +Y++++ G+C E+ KA ++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
N M G + ++ ++ I+I CK +DEA+ L+EM + + + V Y+SLI G C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G++ L DE+ RG ITYN+ + CK + + + + +I++G++P++ TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
L+DGLC G+ K+A ++ + +K N TYN +IN LCK+GL +A+ ++ M+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
D IT+ ++ L KG+ D+A KLL M+
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 133/250 (53%)
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
M++ + V+ S L++ Y + + A V M +RG NV ++NI++ GLC+
Sbjct: 98 MLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE 157
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
+A++LL EM ++P+ +Y+++I G C+ ++ A EL +EM G ++T+
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
+DA CK +D+ + +K++ G++ D+ Y L+ G C CG + + +F ++ ++G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
+ TYNT+I G CK G EA + M + G + T+ +I L G+ +A
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 529 KLLREMIARD 538
+LL MI +D
Sbjct: 338 QLLNLMIEKD 347
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V+ + + ++ +I + ++ KT + A L +M ++ + P+ N
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L++ C G A+ + + + PD ++FN +I G G + A +
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D TY+ LIN K+G + A+ ++ G +P I DS+ K +
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA----HICDSVLKYCISQGE 649
Query: 213 FDLYSEMIAKGISPNVV 229
D +E++ K + ++V
Sbjct: 650 TDKLTELVKKLVDKDIV 666
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D F M + P ++ FN ++ +K +A SL M G++P+ T +
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYS 603
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN LG A S ++ G+ PD ++++K G+ + + ++ +
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
LD+ T+++ +C + A ++L +R+
Sbjct: 664 DIVLDKELTCTVMDYMC---NSSANMDLAKRL 692
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 278/523 (53%), Gaps = 16/523 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPNFVTLN 92
+D +S + P ++ +N VL + +++K + S A ++ ++M + ++PN T N
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI C+ G A ++ + +G P+ +T+NTLI G C K+ + + +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + + ++Y +INGLC+ G+ + +L + RG V YNT+I CK A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++EM+ G++P+V+TY++LI+ C G + +A+ LD+M ++ + P+ TY LVD
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
++G + EA +L M G P VVTY++L++G+C+ ++ A V M +G++P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V SY+ ++ G C+ VDEAL + EM + I P+ +TYSSLI G C+ + A +L +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM G P D TY + ++A C ++K + L ++++KG+ PD+ TY++L++GL K
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMIN---------------GLCKEGLFDEALTLMS 497
R ++A+ + LF + ++ TY+T+I G C +G+ EA +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
M D + +I G+ KA L +EM+ L
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/491 (30%), Positives = 259/491 (52%), Gaps = 20/491 (4%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+D ++ F++M P ++ +N ++ K + L R M + G+ PN ++ N
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++IN C G+ VL + +RGY D +T+NTLIKG C G H+AL H ++L
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G +TY +LI+ +CK G A+E L ++ RG+ P Y T++D + ++ A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ + EM G SP+VVTY+ALI G C+ G+++ AI +L++M K + PDVV+Y+ ++
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ V EA + M+++G+KPD +TYSSL+ G+C +A D++ M R G+ P+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+Y +I C +++AL L EM + ++P+ VTYS LI+GL K + A LL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
++ +TY++ ++ C ++LIK G C G
Sbjct: 580 KLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIK-------------------GFCMKG 619
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+ +A +VF+ + K + + YN MI+G C+ G +A TL +M +G + +T
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 513 TIISALFEKGE 523
++ AL ++G+
Sbjct: 680 ALVKALHKEGK 690
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 253/446 (56%), Gaps = 9/446 (2%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
++++ + L A S++ G+ P +++N ++ + R + F ++V
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI---RSKRNISFAENVF 193
Query: 151 AQGFQLDQV-----TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
+ + QV TY LI G C G + AL L ++E +G P VV YNT+ID CK
Sbjct: 194 KEMLE-SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
++ + F L M KG+ PN+++Y+ +I G C G++K+ +L EM + D VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
YN L+ KEG +A M A M++ G+ P V+TY+SL+ C +N+A + + M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
RG+ PN ++Y ++ G + ++EA +L EM+ P+ VTY++LI+G C TGK+
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
+A +L++M +G D+++Y++ L C+ + VD+ + + +++++KGI+PD TY+ L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
G C+ R K+A ++++++ + G + +TY +IN C EG ++AL L ++M + G +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 506 HDPITFETIISALFEKGENDKAEKLL 531
D +T+ +I+ L ++ +A++LL
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 194/380 (51%), Gaps = 36/380 (9%)
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA------------------ 233
T +++ ++ S ++ L+ A + A G P V++Y+A
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 234 ------------------LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
LI GFC G + A+ L D+M K P+VVTYN L+D K
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
K+ + +L M +G++P++++Y+ +++G C + + V M RRG + + +
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
YN +I G CK +AL + EM + P+ +TY+SLI +CK G ++ A E LD+M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
VRG + TY + +D + ++++ +++++ D G P + TYN L++G C G+++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
DA V +D+ +KG + + +Y+T+++G C+ DEAL + +M + G D IT+ ++I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 516 SALFEKGENDKAEKLLREMI 535
E+ +A L EM+
Sbjct: 493 QGFCEQRRTKEACDLYEEML 512
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 50/317 (15%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D ++ M + ++P ++ ++ VL+ ++ A+ + R+M GI P+ +T +
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI C +T A + +L+ G PD T+ LI C+ G L +ALQ H++++ +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS----------- 202
D VTY+ LINGL K +T A LL ++ P+ V Y+T+I++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 203 ----LCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
C +++ A ++ M+ K P+ Y+ +I+G C G +++A L EMV
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 259 IDPDVVTYNILVDALGKEGKVRE-------------------AK---------------- 283
VT LV AL KEGKV E AK
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 284 NMLAVMIKQGVKPDVVT 300
++LA M K G P+ ++
Sbjct: 731 DVLAEMAKDGFLPNGIS 747
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 261/501 (52%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + V+ F RM P + +N +++ LV + ++ A + +M GITP+ + I
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+ C + +A +L N+ +G + + + T++ G + +LA G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
L T+ L+ LCK G + +LL ++ RG+ P + YN I LC+ + A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ +I +G P+V+TY+ LIYG C + ++A L +MV + ++PD TYN L+
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K G V+ A+ ++ + G PD TY SL+DG C E N+A +FN +G+ PNV
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
YN +I GL M+ EA L EM + +IP T++ L++GLCK G VS+A L+
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M +G DI T+N + ++ + ++ ++D G+ PD+ TYN LL+GLCK +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
+D E ++ + +KG N +T+N ++ LC+ DEAL L+ +M++ D +TF T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 514 IISALFEKGENDKAEKLLREM 534
+I + G+ D A L R+M
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKM 592
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 263/509 (51%), Gaps = 10/509 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V + +++++ + P + +N + L + A+ + + G P+ +T N
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI C + A L ++ G PD+ T+NTLI G C G + A + D +
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF DQ TY +LI+GLC G+T AL L G+GIKP V++YNT+I L ++ A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L +EM KG+ P V T++ L+ G C +G + A GL+ M+ K PD+ T+NIL+
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ K+ A +L VM+ GV PDV TY+SL++G C ++ + + M +G PN
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ ++NI++ LC+ + +DEAL LLEEM + + P+ VT+ +LIDG CK G + A+ L
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 393 EMHVRGQ-PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+M + + TYN + A + +V L ++++D+ + PD TY +++DG CK
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G + + ++ + G+ + T +IN LC E EA ++ +M G + P
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV--PEAV 708
Query: 512 ETIISALFEKGENDKAEKLLREMIARDLL 540
TI DK E +++ DLL
Sbjct: 709 NTICDV-------DKKEVAAPKLVLEDLL 730
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 234/468 (50%), Gaps = 35/468 (7%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
G+ A +V + P ++N ++ L G +A + + + +G D ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
+ CK + AAL LL + +G + VV Y T++ + + ++L+ +M+A
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
G+S + T++ L+ C G +K+ LLD+++ + + P++ TYN+ + L + G++
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 282 AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
A M+ +I+QG KPDV+TY++L+ G C ++ +A M G+ P+ +YN +I
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
G CK MV A ++ + + +P++ TY SLIDGLC G+ + A L +E +G
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
++I YN+ + L + + L ++ +KG+ P++ T+NIL++GLCK G + DA +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 462 QDLFKKGY-----------------------------NLNN------WTYNTMINGLCKE 486
+ + KGY L+N +TYN+++NGLCK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
F++ + M + GC + TF ++ +L + D+A LL EM
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 1/421 (0%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ-GFQLDQVTYATLINGLCKMGQTEA 176
G+ T+ ++I+ L +GK + D+ G + + Y + + G+ +
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
A+ + R++ +PTV YN I+ L A +Y M +GI+P+V +++ +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
FC + A+ LL+ M + + +VV Y +V +E E + M+ GV
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+ T++ L+ C +V + + + + +RGV PN+ +YN+ I GLC+ +D A+ ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+ + P+ +TY++LI GLCK K A L +M G D TYN+ + CKG
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
V ++ + G PD TY L+DGLC G A +F + KG N Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
NT+I GL +G+ EA L ++M + G I + TF +++ L + G A+ L++ MI+
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 537 R 537
+
Sbjct: 455 K 455
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 177/372 (47%), Gaps = 20/372 (5%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
++ FN L I P +I +N ++ L A L+ +M G+ P T NIL+N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
C +G + A ++ ++ +GY PD TFN LI G K+ AL+ D +L G
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D TY +L+NGLCK + E +E + + +G P + +N +++SLC+ + + A L
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDALGK 275
EM K ++P+ VT+ LI GFC G L A L +M + TYNI++ A +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+ V A+ + M+ + + PD TY ++DG+C VN M G P++ +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 336 YNIMIYGLC----------------KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+I LC + +V EA+N + ++D +++ K+ L+ C
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSC 734
Query: 380 KTGKVSNAWELL 391
T A+ELL
Sbjct: 735 IT---YYAYELL 743
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 202/402 (50%), Gaps = 2/402 (0%)
Query: 141 RALQFHDDVLAQ-GFQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNT 198
+AL+ + + + GF+ TY ++I L G+ EA E+L + E G +Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
+ + + V A +++ M P V +Y+A++ G QA + M +
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
I PDV ++ I + + K + A +L M QG + +VV Y +++ G+ N +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
++F M GV+ + ++N ++ LCK V E LL+++ ++PN TY+ I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
C+ G++ A ++ + +G D+ITYN+ + LCK + + K++++G++PD
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TYN L+ G CK G ++ A+ + D G+ + +TY ++I+GLC EG + AL L ++
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
G + I + T+I L +G +A +L EM + L+
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 262/505 (51%), Gaps = 1/505 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ + F++M + R+ P N +L K + M G P T NI
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I+C C G +A + + RG PDT+T+N++I G G+L + F +++
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D +TY LIN CK G+ LE R ++G G+KP VV Y+T++D+ CK ++ A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
Y +M G+ PN TY++LI C +G L A L +EM+ ++ +VVTY L+D L
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+++EA+ + M GV P++ +Y++L+ G+ +++A ++ N + RG+ P++
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
Y I+GLC ++ ++ A ++ EM I N + Y++L+D K+G + LLDE
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII-DKGIQPDMCTYNILLDGLCKCG 452
M ++T+ +D LCK V K + +I D G+Q + + ++DGLCK
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+++ A +F+ + +KG + Y ++++G K+G EAL L KM + G D + +
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 513 TIISALFEKGENDKAEKLLREMIAR 537
+++ L + KA L EMI
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGE 712
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 242/473 (51%), Gaps = 1/473 (0%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P F+ + + L+ AI +M+ + P + N L++ LG+T
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+++ G P T+N +I +C G + A +++ +G D VTY ++I+G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
+G+ + + ++ +P V+ YN +I+ CK + + Y EM G+ PNVV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
YS L+ FC G ++QAI +M + P+ TY L+DA K G + +A + M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ GV+ +VVTY++L+DG C + +A ++F M GV PN+ SYN +I+G K K +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
AL LL E+ I P+ + Y + I GLC K+ A +++EM G A+ + Y + +
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK-GY 469
DA K + +G+ L+ ++ + I+ + T+ +L+DGLCK + A + F + G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
N + MI+GLCK+ + A TL +M G + D + +++ F++G
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 210/405 (51%), Gaps = 1/405 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+DDTV FF M M P +I +N ++ K + R+M+ G+ PN V+ +
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ C G A ++ + G P+ T+ +LI C G L A + +++L G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ + VTY LI+GLC + + A EL +++ G+ P + YN +I K K + A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+L +E+ +GI P+++ Y I+G C + +++ A +++EM I + + Y L+DA
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR-GVTPN 332
K G E ++L M + ++ VVT+ L+DG C V+KA D FN ++ G+ N
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ MI GLCK V+ A L E+M + ++P++ Y+SL+DG K G V A L D
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
+M G D++ Y S + L + + K + ++++I +GI PD
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 232/466 (49%), Gaps = 1/466 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V+ F M + P + +N ++ K + +M+ P+ +T N
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LINC C G+ + G P+ ++++TL+ C G + +A++F+ D+
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G ++ TY +LI+ CK+G A L + G++ VV Y +ID LC + + A
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ +M G+ PN+ +Y+ALI+GF + +A+ LL+E+ + I PD++ Y +
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K+ AK ++ M + G+K + + Y++LMD Y + + + M +
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYE-KIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
V ++ ++I GLCK K+V +A++ + + + N ++++IDGLCK +V A L
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
++M +G D Y S +D K +V + +AL K+ + G++ D+ Y L+ GL C
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+++ A+ +++ +G + + +++ + G DEA+ L S
Sbjct: 697 NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 319 DVFNAM--ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID 376
DVF+ + R P ++ + L + M++EA+ +M ++ P + + L+
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
K GK + +M G + TYN +D +CK V+ L +++ +G+ P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
D TYN ++DG K GR+ D F+++ + TYN +IN CK G L
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355
Query: 497 SKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+M+ NG + +++ T++ A ++G +A K +M
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK---------------IIPN 367
+M R G +V+SY I+ + L +M +A ++L+EM K +P
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
+ +L L G + A + +M + N L K D K
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+I G +P + TYNI++D +CK G ++ A+ +F+++ +G + TYN+MI+G K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
D+ + +M+D C D IT+ +I+ + G+ + REM
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 271/495 (54%), Gaps = 1/495 (0%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKH-YSTAISLSRQMEITGITPNFVTLNILINCHC 99
F +ML + + N LT L K + +TAI + R+ G+ N + NI+I+ C
Sbjct: 198 FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVC 257
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
LG+ A +L + +GY PD I+++T++ G C G+L + + + + +G + +
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y ++I LC++ + A E + +GI P V+Y T+ID CK + A + EM
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
++ I+P+V+TY+A+I GFC +G + +A L EM K ++PD VT+ L++ K G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
++A + MI+ G P+VVTY++L+DG C +++ A ++ + M + G+ PN+ +YN +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
+ GLCK ++EA+ L+ E + + + VTY++L+D CK+G++ A E+L EM +G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
I+T+N ++ C ++ G L+ ++ KGI P+ T+N L+ C +K A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+++D+ +G + TY ++ G CK EA L +M+ G T+ +I
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 520 EKGENDKAEKLLREM 534
++ + +A ++ +M
Sbjct: 678 KRKKFLEAREVFDQM 692
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 245/472 (51%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F ++ + + +N V+ + + A L ME+ G TP+ ++ + ++N +C
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ + ++ + ++G P++ + ++I LC KL A + +++ QG D V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y TLI+G CK G AA + + R I P V+ Y II C++ + A L+ EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
KG+ P+ VT++ LI G+C G +K A + + M+ P+VVTY L+D L KEG +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A +L M K G++P++ TY+S+++G C + +A + G+ + +Y ++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
CK +D+A +L+EM + + P VT++ L++G C G + + +LL+ M +G
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ T+NS + C +++ A+ K + +G+ PD TY L+ G CK +K+A +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
FQ++ KG++++ TY+ +I G K F EA + +M G D F+
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 205/391 (52%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+ M++ I P + + ++ K A +M ITP+ +T +I+ C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+G A + + +G PD++TF LI G C G + A + H+ ++ G + VT
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y TLI+GLCK G ++A ELL + G++P + YN+I++ LCK + A L E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
A G++ + VTY+ L+ +C G++ +A +L EM+ K + P +VT+N+L++ G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+ + +L M+ +G+ P+ T++SL+ YC+ N + A ++ M RGV P+ ++Y ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G CK + + EA L +EM + + TYS LI G K K A E+ D+M G
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIID 431
AD ++ F D KG D + I +II+
Sbjct: 699 ADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 225/426 (52%), Gaps = 5/426 (1%)
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT---YATLINGLCKMGQ 173
+ + D F+ + L G L A + + +L G L + Y T ++ C +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--K 226
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
T A+ + R G+ V YN +I +C++ + A L M KG +P+V++YS
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
++ G+C G+L + L++ M K + P+ Y ++ L + K+ EA+ + MI+QG
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+ PD V Y++L+DG+C ++ A F M R +TP+V +Y +I G C+I + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
L EM + + P+ VT++ LI+G CK G + +A+ + + M G +++TY + +D L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
CK +D L+ ++ G+QP++ TYN +++GLCK G I++A ++ + G N +
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
TY T+++ CK G D+A ++ +M G +TF +++ G + EKLL
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 534 MIARDL 539
M+A+ +
Sbjct: 587 MLAKGI 592
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 182/355 (51%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
FF M ITP ++ + +++ + A L +M G+ P+ VT LIN +C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G AF V ++++ G P+ +T+ TLI GLC G L A + ++ G Q +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY +++NGLCK G E A++L+ E G+ V Y T++D+ CK + A ++ EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ KG+ P +VT++ L+ GFC+ G L+ LL+ M+ K I P+ T+N LV +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ A + M +GV PD TY +L+ G+C + +A +F M +G + +V +Y+++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
I G K K EA + ++M E + +K + D K + + +DE+
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++ D N M+Q +P ++ + ++ L K +A L +M G+ PN T N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++N C G A ++ G + DT+T+ TL+ C G++ +A + ++L +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G Q VT+ L+NG C G E +LL + +GI P +N+++ C + A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+Y +M ++G+ P+ TY L+ G C +K+A L EM K V TY++L+
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
K K EA+ + M ++G+ D + D
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D ML + P I+ FN ++ L M GI PN T N
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ +C +A ++ ++ RG PD T+ L+KG C + A ++ +G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
F + TY+ LI G K + A E+ ++ G+ +++ D+ K K
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Query: 214 DLYSEMI 220
D E+I
Sbjct: 722 DPIDEII 728
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG-HHVDKGIALIKKIIDKGIQPDMCT 440
G + A + ++M G + + N +L L K + I + ++ + G+ ++ +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
YNI++ +C+ GRIK+A + + KGY + +Y+T++NG C+ G D+ L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
G + + +II L + +AE+ EMI + +L
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 271/495 (54%), Gaps = 1/495 (0%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKH-YSTAISLSRQMEITGITPNFVTLNILINCHC 99
F +ML + + N LT L K + +TAI + R+ G+ N + NI+I+ C
Sbjct: 198 FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVC 257
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
LG+ A +L + +GY PD I+++T++ G C G+L + + + + +G + +
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 317
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y ++I LC++ + A E + +GI P V+Y T+ID CK + A + EM
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
++ I+P+V+TY+A+I GFC +G + +A L EM K ++PD VT+ L++ K G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
++A + MI+ G P+VVTY++L+DG C +++ A ++ + M + G+ PN+ +YN +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
+ GLCK ++EA+ L+ E + + + VTY++L+D CK+G++ A E+L EM +G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
I+T+N ++ C ++ G L+ ++ KGI P+ T+N L+ C +K A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+++D+ +G + TY ++ G CK EA L +M+ G T+ +I
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 520 EKGENDKAEKLLREM 534
++ + +A ++ +M
Sbjct: 678 KRKKFLEAREVFDQM 692
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 245/472 (51%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F ++ + + +N V+ + + A L ME+ G TP+ ++ + ++N +C
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ + ++ + ++G P++ + ++I LC KL A + +++ QG D V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y TLI+G CK G AA + + R I P V+ Y II C++ + A L+ EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
KG+ P+ VT++ LI G+C G +K A + + M+ P+VVTY L+D L KEG +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A +L M K G++P++ TY+S+++G C + +A + G+ + +Y ++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
CK +D+A +L+EM + + P VT++ L++G C G + + +LL+ M +G
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ T+NS + C +++ A+ K + +G+ PD TY L+ G CK +K+A +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
FQ++ KG++++ TY+ +I G K F EA + +M G D F+
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 205/391 (52%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+ M++ I P + + ++ K A +M ITP+ +T +I+ C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+G A + + +G PD++TF LI G C G + A + H+ ++ G + VT
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y TLI+GLCK G ++A ELL + G++P + YN+I++ LCK + A L E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
A G++ + VTY+ L+ +C G++ +A +L EM+ K + P +VT+N+L++ G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+ + +L M+ +G+ P+ T++SL+ YC+ N + A ++ M RGV P+ ++Y ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G CK + + EA L +EM + + TYS LI G K K A E+ D+M G
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIID 431
AD ++ F D KG D + I +II+
Sbjct: 699 ADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 225/426 (52%), Gaps = 5/426 (1%)
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT---YATLINGLCKMGQ 173
+ + D F+ + L G L A + + +L G L + Y T ++ C +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--K 226
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
T A+ + R G+ V YN +I +C++ + A L M KG +P+V++YS
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
++ G+C G+L + L++ M K + P+ Y ++ L + K+ EA+ + MI+QG
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+ PD V Y++L+DG+C ++ A F M R +TP+V +Y +I G C+I + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
L EM + + P+ VT++ LI+G CK G + +A+ + + M G +++TY + +D L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
CK +D L+ ++ G+QP++ TYN +++GLCK G I++A ++ + G N +
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
TY T+++ CK G D+A ++ +M G +TF +++ G + EKLL
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 534 MIARDL 539
M+A+ +
Sbjct: 587 MLAKGI 592
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 182/355 (51%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
FF M ITP ++ + +++ + A L +M G+ P+ VT LIN +C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G AF V ++++ G P+ +T+ TLI GLC G L A + ++ G Q +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY +++NGLCK G E A++L+ E G+ V Y T++D+ CK + A ++ EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ KG+ P +VT++ L+ GFC+ G L+ LL+ M+ K I P+ T+N LV +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ A + M +GV PD TY +L+ G+C + +A +F M +G + +V +Y+++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
I G K K EA + ++M E + +K + D K + + +DE+
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++ D N M+Q +P ++ + ++ L K +A L +M G+ PN T N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++N C G A ++ G + DT+T+ TL+ C G++ +A + ++L +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G Q VT+ L+NG C G E +LL + +GI P +N+++ C + A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+Y +M ++G+ P+ TY L+ G C +K+A L EM K V TY++L+
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
K K EA+ + M ++G+ D + D
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D ML + P I+ FN ++ L M GI PN T N
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ +C +A ++ ++ RG PD T+ L+KG C + A ++ +G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
F + TY+ LI G K + A E+ ++ G+ +++ D+ K K
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Query: 214 DLYSEMI 220
D E+I
Sbjct: 722 DPIDEII 728
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG-HHVDKGIALIKKIIDKGIQPDMCT 440
G + A + ++M G + + N +L L K + I + ++ + G+ ++ +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
YNI++ +C+ GRIK+A + + KGY + +Y+T++NG C+ G D+ L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
G + + +II L + +AE+ EMI + +L
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 161/505 (31%), Positives = 263/505 (52%), Gaps = 9/505 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD+ + ML+ ++ P I +NK++ K + A ++ G+ P+F T
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL----QFHDDV 149
LI +C SAF V + +G + + + LI GLC+ ++ A+ + DD
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
+ TY LI LC + AL L++ +E GIKP + Y +IDSLC
Sbjct: 319 CFPTVR----TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
A +L +M+ KG+ PNV+TY+ALI G+C G ++ A+ +++ M + + P+ TYN L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ K V +A +L M+++ V PDVVTY+SL+DG C + A + + M RG+
Sbjct: 435 IKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
P+ +Y MI LCK K V+EA +L + ++ + + PN V Y++LIDG CK GKV A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
+L++M + + +T+N+ + LC + + L +K++ G+QP + T IL+ L
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 509
K G A FQ + G + TY T I C+EG +A +M+KM +NG D
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 510 TFETIISALFEKGENDKAEKLLREM 534
T+ ++I + G+ + A +L+ M
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 241/446 (54%), Gaps = 3/446 (0%)
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
N L+N G V +L+ P+ T+N ++ G C G + A Q+ ++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G D TY +LI G C+ ++A ++ + +G + V Y +I LC + +
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A DL+ +M P V TY+ LI C + +A+ L+ EM I P++ TY +L+D
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+L + K +A+ +L M+++G+ P+V+TY++L++GYC + A DV M R ++P
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
N ++YN +I G CK V +A+ +L +M K++P+ VTY+SLIDG C++G +A+ LL
Sbjct: 427 NTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
M+ RG D TY S +D+LCK V++ L + KG+ P++ Y L+DG CK
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G++ +A + + + K N+ T+N +I+GLC +G EA L KM G + ++
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG-LQPTVST 604
Query: 512 ETI-ISALFEKGENDKAEKLLREMIA 536
+TI I L + G+ D A ++M++
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLS 630
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 228/410 (55%), Gaps = 1/410 (0%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
+NTL+ L G + Q + ++L + TY ++NG CK+G E A + + +I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
G+ P Y ++I C+ K + AF +++EM KG N V Y+ LI+G C+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+A+ L +M P V TY +L+ +L + EA N++ M + G+KP++ TY+ L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
D C + KAR++ M +G+ PNV +YN +I G CK M+++A++++E M+ K+
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
PN TY+ LI G CK+ V A +L++M R D++TYNS +D C+ + D L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+ + D+G+ PD TY ++D LCK R+++A ++F L +KG N N Y +I+G CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
G DEA ++ KM C+ + +TF +I L G+ +A L +M+
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/533 (29%), Positives = 253/533 (47%), Gaps = 57/533 (10%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ML+ + P +I +N ++ K A+ + ME ++PN T N LI +C
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
A VL +L+R PD +T+N+LI G C G A + + +G DQ
Sbjct: 440 K-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY ++I+ LCK + E A +L +E +G+ P VVMY +ID CK V A + +M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV------------------LKNID- 260
++K PN +T++ALI+G C G+LK+A L ++MV LK+ D
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 261 ----------------PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
PD TY + +EG++ +A++M+A M + GV PD+ TYSSL
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM---------------- 348
+ GY + + N A DV M G P+ ++ +I L ++K
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 349 --VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG--QPADII 404
D + LLE+M + PN +Y LI G+C+ G + A ++ D M P++++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 405 TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
+N+ L CK ++ ++ +I G P + + +L+ GL K G + VFQ+L
Sbjct: 799 -FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 465 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
+ GY + + +I+G+ K+GL + L + ME NGC T+ +I
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 264/519 (50%), Gaps = 20/519 (3%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ ++ M + I P I + ++ SL + A L QM G+ PN +T N LI
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
N +C G A V+ + R P+T T+N LIKG C +H+A+ + +L +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVL 459
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D VTY +LI+G C+ G ++A LL + RG+ P Y ++IDSLCK K V A DL
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ + KG++PNVV Y+ALI G+C G++ +A +L++M+ KN P+ +T+N L+ L
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+GK++EA + M+K G++P V T + L+ + + A F M G P+ +
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
Y I C+ + +A +++ +M + P+ TYSSLI G G+ + A+++L M
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 396 VRGQPADIITYNSFLD------------------ALCKGHHVDKGIALIKKIIDKGIQPD 437
G T+ S + A+ D + L++K+++ + P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFK-KGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
+Y L+ G+C+ G ++ A++VF + + +G + + +N +++ CK +EA ++
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 497 SKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
M G + + + +I L++KGE ++ + + ++
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 197/380 (51%), Gaps = 1/380 (0%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y TL+N L + G + ++ + + P + YN +++ CK+ V A S+++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
G+ P+ TY++LI G+C L A + +EM LK + V Y L+ L ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA ++ M P V TY+ L+ C ++A ++ M G+ PN+ +Y ++I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
LC ++A LL +M + ++PN +TY++LI+G CK G + +A ++++ M R
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ TYN + CK + V K + ++ K++++ + PD+ TYN L+DG C+ G A +
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
+ +G + WTY +MI+ LCK +EA L +E G + + + +I +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 521 KGENDKAEKLLREMIARDLL 540
G+ D+A +L +M++++ L
Sbjct: 545 AGKVDEAHLMLEKMLSKNCL 564
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 18/399 (4%)
Query: 15 NPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAIS 74
NPN VD+ +ML P + FN ++ L A
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 75 LSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLC 134
L +M G+ P T ILI+ G A+S +L G PD T+ T I+ C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 135 LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVV 194
G+L A + G D TY++LI G +GQT A ++L+R+ G +P+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
+ ++I L ++K KG P + S ++ + + LL++M
Sbjct: 709 TFLSLIKHLLEMKYGKQ----------KGSEPELCAMSNMM-------EFDTVVELLEKM 751
Query: 255 VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK-QGVKPDVVTYSSLMDGYCLVNE 313
V ++ P+ +Y L+ + + G +R A+ + M + +G+ P + +++L+ C + +
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
N+A V + M G P ++S ++I GL K + ++ + + +++ +
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
+IDG+ K G V +EL + M G TY+ ++
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 257/522 (49%), Gaps = 22/522 (4%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ + F NRM P ++ ++ +L + K + M + G P+ N L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGK------LHRALQFHDD 148
++ +C G + A+ +L ++K G+ P + +N LI +C L A + + +
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 149 VLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
+LA G L+++ ++ LC G+ E A ++R + G+G P Y+ +++ LC
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
+ AF L+ EM G+ +V TY+ ++ FC G ++QA +EM P+VVTY
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA--- 325
L+ A K KV A + M+ +G P++VTYS+L+DG+C +V KA +F M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 326 -------------RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
PNV +Y ++ G CK V+EA LL+ M E PN++ Y
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+LIDGLCK GK+ A E+ EM G PA + TY+S +D K D ++ K+++
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
P++ Y ++DGLCK G+ +A ++ Q + +KG N TY MI+G G +
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
L L+ +M G + +T+ +I + G D A LL EM
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 259/549 (47%), Gaps = 60/549 (10%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
R+ R P +N ++ + +K +A + R+M + + + TL C +G
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ A +++ + PDT+ + LI GLC A+ F + + A + VTY+
Sbjct: 285 KWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 341
Query: 163 TLING-----------------------------------LCKMGQTEAALELLRRIEGR 187
TL+ G C G A +LL+++
Sbjct: 342 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 188 GIKPTVVMYNTIIDSLCKVK------LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
G P V+YN +I S+C K L+ A YSEM+A G+ N + S+ C
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 461
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
G+ ++A ++ EM+ + PD TY+ +++ L K+ A + M + G+ DV TY
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+ ++D +C + +AR FN M G TPNV +Y +I+ K K V A L E M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM----------------HVRGQPADIIT 405
E +PN VTYS+LIDG CK G+V A ++ + M + +++T
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
Y + LD CK H V++ L+ + +G +P+ Y+ L+DGLCK G++ +AQEV ++
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 525
+ G+ +TY+++I+ K D A ++SKM +N C + + + +I L + G+ D
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 526 KAEKLLREM 534
+A KL++ M
Sbjct: 762 EAYKLMQMM 770
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 247/540 (45%), Gaps = 86/540 (15%)
Query: 78 QMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHG 137
+M G+ N + ++ C C G+ AFSV+ ++ +G+ PDT T++ ++ LC
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 138 KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
K+ A +++ G D TY +++ CK G E A + + G P VV Y
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 198 TIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD----- 252
+I + K K VS+A +L+ M+++G PN+VTYSALI G C GQ+++A + +
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 253 ------EMVLKNID-----PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
+M K D P+VVTY L+D K +V EA+ +L M +G +P+ + Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGV-------------------------------- 329
+L+DG C V ++++A++V M+ G
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 330 ---TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
PNV Y MI GLCK+ DEA L++ M+ + PN VTY+++IDG GK+
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVD-------------------------- 420
ELL+ M +G + +TY +D CK +D
Sbjct: 798 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857
Query: 421 -------KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
+ + L+ +I P + Y +L+D L K R++ A + +++ L +
Sbjct: 858 GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917
Query: 474 W--TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
+ TYN++I LC + A L S+M G I + +F ++I LF + +A LL
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 215/444 (48%), Gaps = 24/444 (5%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++ +FN M ++ TP ++ + ++ + +K K S A L M G PN VT +
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 94 LINCHCYLGQTTSAFSVLANIL----------------KRGYHPDTITFNTLIKGLCLHG 137
LI+ HC GQ A + + P+ +T+ L+ G C
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 138 KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
++ A + D + +G + +Q+ Y LI+GLCK+G+ + A E+ + G T+ Y+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 198 TIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK 257
++ID KVK A + S+M+ +PNVV Y+ +I G C VG+ +A L+ M K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 258 NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
P+VVTY ++D G GK+ +L M +GV P+ VTY L+D C ++ A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 318 RDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
++ M + + Y +I G K + E+L LL+E+ + P Y LID
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADII----TYNSFLDALCKGHHVDKGIALIKKIIDKG 433
L K ++ A LL+E V A ++ TYNS +++LC + V+ L ++ KG
Sbjct: 892 LIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Query: 434 IQPDMCTYNILLDGLCKCGRIKDA 457
+ P+M ++ L+ GL + +I +A
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEA 973
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 224/520 (43%), Gaps = 54/520 (10%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+ S M+ P ++KVL L A L +M+ G+ + T I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ C G A + + G P+ +T+ LI K+ A + + +L++G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGR----------------GIKPTVVMYNT 198
+ VTY+ LI+G CK GQ E A ++ R+ G +P VV Y
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
++D CK V A L M +G PN + Y ALI G C VG+L +A + EM
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
+ TY+ L+D K + A +L+ M++ P+VV Y+ ++DG C V + ++A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
+ M +G PNV +Y MI G I ++ L LLE M + + PN VTY LID
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNS------------------------------ 408
CK G + A LL+EM P Y
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 409 ---FLDALCKGHHVDKGIALIKKI--IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
+D L K ++ + L++++ + TYN L++ LC +++ A ++F +
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM---SKME 500
+ KKG ++ ++I GL + EAL L+ S ME
Sbjct: 945 MTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME 984
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 222/501 (44%), Gaps = 60/501 (11%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
LN+L+ HC G + A L + + P T+N LI+ +L A H ++
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
++D T LCK+G+ AL L +E P V Y +I LC+ L
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFE 319
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A D + M A PNVVTYS L+ G QL + +L+ M+++ P +N LV
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC--------------------- 309
A G A +L M+K G P V Y+ L+ C
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 310 -----LVNEVN---------------KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
++N++N KA V M +G P+ +Y+ ++ LC +
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
+ A L EEM ++ + TY+ ++D CK G + A + +EM G +++TY +
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ------- 462
+ A K V L + ++ +G P++ TY+ L+DG CK G+++ A ++F+
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 463 ----DLFKKGYNLNNW-----TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
D++ K Y+ N+ TY +++G CK +EA L+ M GC + I ++
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 514 IISALFEKGENDKAEKLLREM 534
+I L + G+ D+A+++ EM
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEM 700
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 4/333 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + M P I ++ ++ L K A + +M G T +
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ + + + A VL+ +L+ P+ + + +I GLC GK A + + +G
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
Q + VTY +I+G +G+ E LELL R+ +G+ P V Y +ID CK + A
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+L EM + Y +I GF + +++GLLDE+ + P + Y +L+D L
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 274 GKEGKVREAKNML--AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
K ++ A +L + TY+SL++ CL N+V A +F+ M ++GV P
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+QS+ +I GL + + EAL LL+ + + +I
Sbjct: 953 EMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 146/383 (38%), Gaps = 79/383 (20%)
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
L+ C G A+ L + P TYN L+ A K ++ A + M
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
++ D T C +V K R+ + P+ Y +I GLC+ + +EA+
Sbjct: 266 LRMDGFTLRCFAYSLC---KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 354 NLLEEMDYEKIIPNKVTYS-----------------------------------SLIDGL 378
+ L M +PN VTYS SL+
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYN------------------------------- 407
C +G S A++LL +M G + YN
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 408 ----------SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
SF LC +K ++I+++I +G PD TY+ +L+ LC +++ A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
+F+++ + G + +TY M++ CK GL ++A ++M + GC + +T+ +I A
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 518 LFEKGENDKAEKLLREMIARDLL 540
+ + A +L M++ L
Sbjct: 563 YLKAKKVSYANELFETMLSEGCL 585
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 9/280 (3%)
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
N+LV + G A L + +P TY+ L+ + + ++ A + M+
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
+ + + Y LCK+ EAL L+E E +P+ V Y+ LI GLC+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 320
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
A + L+ M +++TY++ L + + ++ ++ +G P +N L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 447 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE------GLFDEALTLMSKME 500
C G A ++ + + K G+ YN +I +C + L D A S+M
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
G + + I + L G+ +KA ++REMI + +
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 243/433 (56%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+D ++ F M + P I++F+++L ++ K Y ISL R +E+ GI+ + + L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+C C + + A S L ++K G+ P +TF +L+ G C + + A+ D ++ G+
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ + V Y T+I+ LC+ GQ AL++L+ ++ GI+P VV YN++I L +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
+ S+M+ GISP+V+T+SALI + GQL +A +EM+ ++++P++VTYN L++ L
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
G + EAK +L V++ +G P+ VTY++L++GYC V+ + M+R GV +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+YN + G C+ A +L M + P+ T++ L+DGLC GK+ A L+++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
IITYN + LCK V+ L + KG+ PD+ TY ++ GL +
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 455 KDAQEVFQDLFKK 467
++A E+++ + K+
Sbjct: 481 REAHELYRKMQKE 493
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 215/418 (51%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P + F+ L+ + K + + G D ++ TLI+ C+ + AL
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
L ++ G +P++V + ++++ C V A L +++ G PNVV Y+ +I C
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
GQ+ A+ +L M I PDVVTYN L+ L G + +L+ M++ G+ PDV+T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
+S+L+D Y ++ +A+ +N M +R V PN+ +YN +I GLC ++DEA +L +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ PN VTY++LI+G CK +V + ++L M G D TYN+ C+
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
++ +++ G+ PDM T+NILLDGLC G+I A +DL K + TYN +I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
GLCK ++A L + G D IT+ T++ L K +A +L R+M D
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 172/325 (52%)
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A L+ +M P++V +S L+ + + + I L + + I D+ ++ L+D
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ ++ A + L M+K G +P +VT+ SL++G+C VN +A + + + G P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV YN +I LC+ V+ AL++L+ M I P+ VTY+SLI L +G + +L
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+M G D+IT+++ +D K + + ++I + + P++ TYN L++GLC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G + +A++V L KG+ N TYNT+ING CK D+ + ++ M +G D T+
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 512 ETIISALFEKGENDKAEKLLREMIA 536
T+ + G+ AEK+L M++
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVS 387
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 159/300 (53%), Gaps = 1/300 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
V+ + M +M I P ++ +N ++T L + + + + M GI+P+ +T +
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ + GQ A +++R +P+ +T+N+LI GLC+HG L A + + ++++
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF + VTY TLING CK + + +++L + G+ YNT+ C+ S A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ M++ G+ P++ T++ L+ G C G++ +A+ L+++ ++TYNI++
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR-GVTP 331
L K KV +A + + +GV PDV+TY ++M G +A +++ M + G+ P
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 159/299 (53%), Gaps = 7/299 (2%)
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+ A+ L +M + P +V ++ L+ A+ K K ++ + G+ D+ +++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE---M 359
+L+D +C ++ A M + G P++ ++ ++ G C + EA++L+++ +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 419
YE PN V Y+++ID LC+ G+V+ A ++L M G D++TYNS + L
Sbjct: 179 GYE---PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
++ ++ GI PD+ T++ L+D K G++ +A++ + ++ ++ N N TYN++
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
INGLC GL DEA +++ + G + +T+ T+I+ + D K+L M +RD
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM-SRD 353
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 117/227 (51%)
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
+ N A +F MA P++ ++ ++ + K+ + ++L ++ I + +++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+LID C+ ++S A L +M G I+T+ S ++ C + + ++L+ +I+
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
G +P++ YN ++D LC+ G++ A +V + + K G + TYN++I L G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
++S M G D ITF +I ++G+ +A+K EMI R +
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 248/486 (51%), Gaps = 19/486 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD SFF +L+ + P + N ++ L + A+ L+ M G+ P+ VT NI
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L LG + A+ V+ ++L +G PD IT+ L+ G C G + L D+L++G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 154 FQLDQVT-YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
F+L+ + + +++GLCK G+ + AL L +++ G+ P +V Y+ +I LCK+ A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
LY EM K I PN T+ AL+ G C G L +A LLD ++ D+V YNI++D
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G + EA + V+I+ G+ P V T++SL+ GYC + +AR + + + G+ P+
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 333 VQSYNIMI--YGLC-KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
V SY ++ Y C K +DE L EM E I P VTYS + GLC+ K N
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 390 LLDE------------MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
+L E M G P D ITYN+ + LC+ H+ ++ + + +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
TYNIL+D LC G I+ A L ++ +L+ + Y T+I C +G + A+ L
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 498 KMEDNG 503
++ G
Sbjct: 715 QLLHRG 720
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 267/517 (51%), Gaps = 13/517 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D V F I P ++ FN +++ K A S + G+ P+ + NI
Sbjct: 203 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN C +G A + +++ K G PD++T+N L KG L G + A + D+L +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIK-PTVVMYNTIIDSLCKVKLVSHA 212
D +TY L+ G C++G + L LL+ + RG + +++ + ++ LCK + A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L+++M A G+SP++V YS +I+G C +G+ A+ L DEM K I P+ T+ L+
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L ++G + EA+++L +I G D+V Y+ ++DGY + +A ++F + G+TP+
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V ++N +IYG CK + + EA +L+ + + P+ V+Y++L+D G + EL
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 393 EMHVRGQPADIITYNSFLDALCKG-HHVDKGIALIKKIIDK-----------GIQPDMCT 440
EM G P +TY+ LC+G H + L ++I +K GI PD T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
YN ++ LC+ + A + + + + ++ TYN +I+ LC G +A + + ++
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
+ + T+I A KG+ + A KL +++ R
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 221/466 (47%), Gaps = 83/466 (17%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
++ TY+T+++GLC+ + E A+ LR E + I P+VV +N+I+ CK+ V A +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
++ G+ P+V +++ LI G C+VG + +A+ L +M ++PD VTYNIL
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTY----------------------------------- 301
G + A ++ M+ +G+ PDV+TY
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 302 -SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
S ++ G C +++A +FN M G++P++ +Y+I+I+GLCK+ D AL L +EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
++I+PN T+ +L+ GLC+ G + A LLD + G+ DI+ YN +D K ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCK------------------------------ 450
+ + L K +I+ GI P + T+N L+ G CK
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 451 -----CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC------------KEGLFDEAL 493
CG K E+ +++ +G N TY+ + GLC +E +F++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 494 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ ME G D IT+ TII L A L M +R+L
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 154/296 (52%), Gaps = 16/296 (5%)
Query: 250 LLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC 309
+L +M +N++ +YN ++ RE M V K+ + TYS+++DG C
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDVY-KEIKDKNEHTYSTVVDGLC 198
Query: 310 LVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV 369
++ A + + P+V S+N ++ G CK+ VD A + + ++P+
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 370 TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH----VDKGIAL 425
+++ LI+GLC G ++ A EL +M+ G D +TYN L KG H + +
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN----ILAKGFHLLGMISGAWEV 314
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT-YNTMINGLC 484
I+ ++DKG+ PD+ TY ILL G C+ G I + +D+ +G+ LN+ + M++GLC
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
K G DEAL+L ++M+ +G D + + +I L + G+ D A L EM + +L
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 12/328 (3%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D + ++ M RI P +L L + A SL + +G T + V NI+
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIV 474
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+ + G A + +++ G P TFN+LI G C + A + D + G
Sbjct: 475 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL 534
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK--------- 205
V+Y TL++ G T++ EL R ++ GI PT V Y+ I LC+
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 206 ---VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD 262
++ +M ++GI P+ +TY+ +I C V L A L+ M +N+D
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
TYNIL+D+L G +R+A + + + +Q V Y++L+ +C+ + A +F+
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ RG +++ Y+ +I LC+ +++
Sbjct: 715 QLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 110/204 (53%), Gaps = 7/204 (3%)
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
++++++ +++MVD++L +L++M + + + +Y+S++ +T K+ W++ E+
Sbjct: 127 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIK 183
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
+ + TY++ +D LC+ ++ + ++ K I P + ++N ++ G CK G +
Sbjct: 184 DKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 239
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
A+ F + K G + +++N +INGLC G EAL L S M +G D +T+ +
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 299
Query: 516 SALFEKGENDKAEKLLREMIARDL 539
G A +++R+M+ + L
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGL 323
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 248/486 (51%), Gaps = 19/486 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD SFF +L+ + P + N ++ L + A+ L+ M G+ P+ VT NI
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L LG + A+ V+ ++L +G PD IT+ L+ G C G + L D+L++G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 154 FQLDQVT-YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
F+L+ + + +++GLCK G+ + AL L +++ G+ P +V Y+ +I LCK+ A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
LY EM K I PN T+ AL+ G C G L +A LLD ++ D+V YNI++D
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G + EA + V+I+ G+ P V T++SL+ GYC + +AR + + + G+ P+
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 333 VQSYNIMI--YGLC-KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
V SY ++ Y C K +DE L EM E I P VTYS + GLC+ K N
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 390 LLDE------------MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
+L E M G P D ITYN+ + LC+ H+ ++ + + +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
TYNIL+D LC G I+ A L ++ +L+ + Y T+I C +G + A+ L
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 498 KMEDNG 503
++ G
Sbjct: 715 QLLHRG 720
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 267/517 (51%), Gaps = 13/517 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D V F I P ++ FN +++ K A S + G+ P+ + NI
Sbjct: 203 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN C +G A + +++ K G PD++T+N L KG L G + A + D+L +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIK-PTVVMYNTIIDSLCKVKLVSHA 212
D +TY L+ G C++G + L LL+ + RG + +++ + ++ LCK + A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L+++M A G+SP++V YS +I+G C +G+ A+ L DEM K I P+ T+ L+
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L ++G + EA+++L +I G D+V Y+ ++DGY + +A ++F + G+TP+
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V ++N +IYG CK + + EA +L+ + + P+ V+Y++L+D G + EL
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 393 EMHVRGQPADIITYNSFLDALCKG-HHVDKGIALIKKIIDK-----------GIQPDMCT 440
EM G P +TY+ LC+G H + L ++I +K GI PD T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
YN ++ LC+ + A + + + + ++ TYN +I+ LC G +A + + ++
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
+ + T+I A KG+ + A KL +++ R
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 221/466 (47%), Gaps = 83/466 (17%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
++ TY+T+++GLC+ + E A+ LR E + I P+VV +N+I+ CK+ V A +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
++ G+ P+V +++ LI G C+VG + +A+ L +M ++PD VTYNIL
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTY----------------------------------- 301
G + A ++ M+ +G+ PDV+TY
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 302 -SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
S ++ G C +++A +FN M G++P++ +Y+I+I+GLCK+ D AL L +EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
++I+PN T+ +L+ GLC+ G + A LLD + G+ DI+ YN +D K ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCK------------------------------ 450
+ + L K +I+ GI P + T+N L+ G CK
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 451 -----CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC------------KEGLFDEAL 493
CG K E+ +++ +G N TY+ + GLC +E +F++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 494 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ ME G D IT+ TII L A L M +R+L
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 156/299 (52%), Gaps = 16/299 (5%)
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
++ +L +M +N++ +YN ++ RE M V K+ + TYS+++D
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDVY-KEIKDKNEHTYSTVVD 195
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
G C ++ A + + P+V S+N ++ G CK+ VD A + + ++P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH----VDKG 422
+ +++ LI+GLC G ++ A EL +M+ G D +TYN L KG H +
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN----ILAKGFHLLGMISGA 311
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT-YNTMIN 481
+I+ ++DKG+ PD+ TY ILL G C+ G I + +D+ +G+ LN+ + M++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
GLCK G DEAL+L ++M+ +G D + + +I L + G+ D A L EM + +L
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 161/364 (44%), Gaps = 47/364 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPN------ 87
+D+ +S FN+M ++P ++ ++ V+ L K + A+ L +M I PN
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 88 -----------------------------FVTLNILINCHCYLGQTTSAFSVLANILKRG 118
V NI+I+ + G A + +++ G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
P TFN+LI G C + A + D + G V+Y TL++ G T++
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCK------------VKLVSHAFDLYSEMIAKGISP 226
EL R ++ GI PT V Y+ I LC+ ++ +M ++GI P
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ +TY+ +I C V L A L+ M +N+D TYNIL+D+L G +R+A + +
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
+ +Q V Y++L+ +C+ + A +F+ + RG +++ Y+ +I LC+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Query: 347 KMVD 350
+++
Sbjct: 739 HLMN 742
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 110/204 (53%), Gaps = 7/204 (3%)
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
++++++ +++MVD++L +L++M + + + +Y+S++ +T K+ W++ E+
Sbjct: 127 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIK 183
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
+ + TY++ +D LC+ ++ + ++ K I P + ++N ++ G CK G +
Sbjct: 184 DKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 239
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
A+ F + K G + +++N +INGLC G EAL L S M +G D +T+ +
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 299
Query: 516 SALFEKGENDKAEKLLREMIARDL 539
G A +++R+M+ + L
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGL 323
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/561 (31%), Positives = 266/561 (47%), Gaps = 75/561 (13%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
+ FN M+ + I P + + V+ SL + K S A + ME TG N V N+LI+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
C + A + ++ + PD +T+ TL+ GLC + L+ D++L F
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
+ ++L+ GL K G+ E AL L++R+ G+ P + +YN +IDSLCK + A L+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
M G+ PN VTYS LI FC G+L A+ L EMV + V YN L++ K
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA------------------- 317
G + A+ +A MI + ++P VVTY+SLM GYC ++NKA
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 318 -------------RD---VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
RD +FN MA V PN +YN+MI G C+ + +A L+EM
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH-------------------------- 395
+ I+P+ +Y LI GLC TG+ S A +D +H
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 396 ---------VRGQPADIITYNSFLDALCKGHHVDKGI--ALIKKIIDKGIQPDMCTYNIL 444
RG D++ Y +D K H D+ + L+K++ D+G++PD Y +
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLK--HKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
+D K G K+A ++ + +G N TY +INGLCK G +EA L SKM+
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 505 IHDPITFETIISALFEKGEND 525
+ + +T+ + L KGE D
Sbjct: 749 VPNQVTYGCFLDIL-TKGEVD 768
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 261/502 (51%), Gaps = 2/502 (0%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
F+RM ++ + P + ++ ++ + TA+S +M TG+ + N LIN HC
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G ++A +A ++ + P +T+ +L+ G C GK+++AL+ + ++ +G
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
T+ TL++GL + G A++L + +KP V YN +I+ C+ +S AF+ EM
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
KGI P+ +Y LI+G C+ GQ +A +D + N + + + Y L+ +EGK+
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
EA ++ M+++GV D+V Y L+DG + + M RG+ P+ Y M
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I K EA + + M E +PN+VTY+++I+GLCK G V+ A L +M
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 400 PADIITYNSFLDALCKGH-HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+ +TY FLD L KG + K + L I+ KG+ + TYN+L+ G C+ GRI++A
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
E+ + G + + TY TMIN LC+ +A+ L + M + G D + + T+I
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 519 FEKGENDKAEKLLREMIARDLL 540
GE KA +L EM+ + L+
Sbjct: 868 CVAGEMGKATELRNEMLRQGLI 889
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/570 (28%), Positives = 274/570 (48%), Gaps = 71/570 (12%)
Query: 36 DTVSFFNRML-QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D V F M+ ++ + P + + +L LVK +H+ A+ L M GI P+ +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I C L + A ++A++ G + + +N LI GLC K+ A+ D+ +
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 155 QLDQVTYATLINGLCKM-----------------------------------GQTEAALE 179
+ D VTY TL+ GLCK+ G+ E AL
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 180 LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFC 239
L++R+ G+ P + +YN +IDSLCK + A L+ M G+ PN VTYS LI FC
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
G+L A+ L EMV + V YN L++ K G + A+ +A MI + ++P VV
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
TY+SLM GYC ++NKA +++ M +G+ P++ ++ ++ GL + ++ +A+ L EM
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI---------------- 403
+ PN+VTY+ +I+G C+ G +S A+E L EM +G D
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 404 -------------------ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
I Y L C+ +++ +++ ++++ +G+ D+ Y +L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
+DG K K + +++ +G ++ Y +MI+ K G F EA + M + GC
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREM 534
+ + +T+ +I+ L + G ++AE L +M
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 202/381 (53%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
T + L++GL K A+EL + GI+P V +Y +I SLC++K +S A ++ + M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
A G N+V Y+ LI G C ++ +A+G+ ++ K++ PDVVTY LV L K +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
M+ M+ P SSL++G ++ +A ++ + GV+PN+ YN +
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I LCK + EA L + M + PN VTYS LID C+ GK+ A L EM G
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
+ YNS ++ CK + + ++I+K ++P + TY L+ G C G+I A
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
++ ++ KG + +T+ T+++GL + GL +A+ L ++M + + +T+ +I
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 520 EKGENDKAEKLLREMIARDLL 540
E+G+ KA + L+EM + ++
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIV 574
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 70/407 (17%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++ + ++ M I P I F +L+ L + A+ L +M + PN VT N+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I +C G + AF L + ++G PDT ++ LI GLCL G+ A F D +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 154 FQLDQVTYATLINGLCKMGQTEAALE---------------------------------- 179
+L+++ Y L++G C+ G+ E AL
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 180 -LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
LL+ + RG+KP V+Y ++ID+ K AF ++ MI +G PN VTY+A+I G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 239 CIVGQLKQAIGLLDEM-----------------------------------VLKNIDPDV 263
C G + +A L +M +LK + +
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
TYN+L+ ++G++ EA ++ MI GV PD +TY+++++ C N+V KA +++N+
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
M +G+ P+ +YN +I+G C + +A L EM + +IPN T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 206/409 (50%), Gaps = 20/409 (4%)
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL- 208
L +GF ++ LI+ L K A LL+ + R +KP+ V +N + K KL
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCYEKCKLS 154
Query: 209 VSHAFDL-----------------YSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGL 250
S +FDL + MI K + P V T SAL++G A+ L
Sbjct: 155 SSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMEL 214
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
++MV I PDV Y ++ +L + + AK M+A M G ++V Y+ L+DG C
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
+V +A + +A + + P+V +Y ++YGLCK++ + L +++EM + P++
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
SSL++GL K GK+ A L+ + G ++ YN+ +D+LCKG + L ++
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
G++P+ TY+IL+D C+ G++ A ++ G L+ + YN++ING CK G
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
A M++M + +T+ +++ KG+ +KA +L EM + +
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 268/519 (51%), Gaps = 38/519 (7%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
++ +L SL K A R+ME G + ++N C G T +A ++ IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL--DQVTYATLINGLCKMGQ 173
K G+ D+ +L+ G C L AL+ DV+++ + V+Y+ LI+GLC++G+
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
E A L ++ +G +P+ Y +I +LC L+ AF+L+ EMI +G PNV TY+
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI G C G++++A G+ +MV I P V+TYN L++ K+G+V A +L VM K+
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
KP+V T++ LM+G C V + KA + M G++P++ SYN++I GLC+ ++ A
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
LL M+ I P+ +T++++I+ CK GK A L M +G D +T + +D +
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 414 C-----------------------------------KGHHVDKGIALIKKIIDKGIQPDM 438
C KG V + +A++ KI G+ P +
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TY L+DGL + G I + + + + G N + Y +INGLC+ G +EA L+S
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
M+D+G + +T+ ++ G+ D+A + +R M+ R
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 269/524 (51%), Gaps = 19/524 (3%)
Query: 33 NVDDTVSFFNRML-QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTL 91
N+ D + F+ M ++ P + ++ ++ L + A L QM G P+ T
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
+LI C G AF++ ++ RG P+ T+ LI GLC GK+ A ++
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+TY LING CK G+ A ELL +E R KP V +N +++ LC+V
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A L M+ G+SP++V+Y+ LI G C G + A LL M +I+PD +T+ +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
A K+GK A L +M+++G+ D VT ++L+DG C V + A + + + +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
S N+++ L K V E L +L +++ ++P+ VTY++L+DGL ++G ++ ++ +L
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+ M + G ++ Y ++ LC+ V++ L+ + D G+ P+ TY +++ G
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMING--LCKEGLFDEALTLMS----KMEDNGCI 505
G++ A E + + ++GY LN+ Y++++ G L ++G+ + + +S + D CI
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI 724
Query: 506 HDPITFET------------IISALFEKGENDKAEKLLREMIAR 537
++ I+ +++ L ++G D++ L++ ++ R
Sbjct: 725 NELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 248/456 (54%), Gaps = 2/456 (0%)
Query: 85 TPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ 144
PN V+ +ILI+ C +G+ AF + + ++G P T T+ LIK LC G + +A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 145 FHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
D+++ +G + + TY LI+GLC+ G+ E A + R++ I P+V+ YN +I+ C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
K V AF+L + M + PNV T++ L+ G C VG+ +A+ LL M+ + PD+V
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+YN+L+D L +EG + A +L+ M ++PD +T++++++ +C + + A M
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
R+G++ + + +I G+CK+ +AL +LE + +I+ + + ++D L K KV
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
+L +++ G ++TY + +D L + + +++ + G P++ Y I+
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
++GLC+ GR+++A+++ + G + N+ TY M+ G G D AL + M + G
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Query: 505 IHDPITFETIISA--LFEKGENDKAEKLLREMIARD 538
+ + +++ L +KG ++ E + ++ R+
Sbjct: 683 ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRE 718
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 258/527 (48%), Gaps = 27/527 (5%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + F+ M+ P + + ++ L + A + R+M I P+ +T N
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN +C G+ AF +L + KR P+ TFN L++GLC GK ++A+ +L G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D V+Y LI+GLC+ G A +LL + I+P + + II++ CK A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
M+ KGIS + VT + LI G C VG+ + A+ +L+ +V I + N+++D L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K KV+E ML + K G+ P VVTY++L+DG ++ + + M G PNV
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
Y I+I GLC+ V+EA LL M + PN VTY+ ++ G GK+ A E +
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 394 MHVRGQPADIITYNSFLDALC---KG-------------------HHVDKGIALIKKIID 431
M RG + Y+S L KG +++ I++++++
Sbjct: 677 MVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL-- 734
Query: 432 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 491
G +C + L+ LCK GR ++ ++ Q++ ++G L + ++ C + +
Sbjct: 735 GGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTK 791
Query: 492 ALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
+ L++ + +G + +F +I L ++G+ ++A +L+ E++ +
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSN 838
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 227/490 (46%), Gaps = 110/490 (22%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK------- 205
GF+L+ Y++L+ L K+ A RR+E G ++ Y TI+++LCK
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 206 -----------VKLVSH--------------------AFDLYSEMIAKGISPNVVTYSAL 234
L SH FD+ S+ + +PN V+YS L
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVT--CAPNSVSYSIL 272
Query: 235 IYGFCIVGQLKQAIG-----------------------------------LLDEMVLKNI 259
I+G C VG+L++A G L DEM+ +
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
P+V TY +L+D L ++GK+ EA + M+K + P V+TY++L++GYC V A +
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+ M +R PNV+++N ++ GLC++ +A++LL+ M + P+ V+Y+ LIDGLC
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
+ G ++ A++LL M+ D +T+ + ++A CK D A + ++ KGI D
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 440 TYNILLDGLCKCGRIKDAQEVFQ------------------DLFKKGYNLNNW------- 474
T L+DG+CK G+ +DA + + D+ KG +
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 475 ----------TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 524
TY T+++GL + G + ++ M+ +GC+ + + II+ L + G
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 525 DKAEKLLREM 534
++AEKLL M
Sbjct: 633 EEAEKLLSAM 642
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 173/335 (51%), Gaps = 13/335 (3%)
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD-----VVT 265
+ FD E+ G N YS+L+ K +G L + + ++ D ++
Sbjct: 145 YCFDELREVF--GFRLNYPCYSSLLMSLA-----KLDLGFLAYVTYRRMEADGFVVGMID 197
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
Y +V+AL K G A+ ++ ++K G D +SL+ G+C + A VF+ M+
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 326 RR-GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
+ PN SY+I+I+GLC++ ++EA L ++M + P+ TY+ LI LC G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
A+ L DEM RG ++ TY +D LC+ +++ + +K++ I P + TYN L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
++G CK GR+ A E+ + K+ N T+N ++ GLC+ G +A+ L+ +M DNG
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
D +++ +I L +G + A KLL M D+
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 191/456 (41%), Gaps = 92/456 (20%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
V RML ++P I+ +N ++ L + H +TA L M I P+ +T +IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHD--------- 147
C G+ A + L +L++G D +T TLI G+C GK AL +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 148 ---------DVLAQGFQLDQ-----------------VTYATLINGLCKMGQTEAALELL 181
D+L++G ++ + VTY TL++GL + G + +L
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
++ G P V Y II+ LC+ V A L S M G+SPN VTY+ ++ G+
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 242 GQLKQAIGLLDEMV-------------------------------------LKNIDPDVV 264
G+L +A+ + MV L+ DP+ +
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI 724
Query: 265 TYNI----------------LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
I LV L KEG+ E+ +++ ++++GV + +M+ Y
Sbjct: 725 NELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESY 783
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C + K ++ + + G P+ +S+ ++I GL K + A L+ E+ + K
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEK 843
Query: 369 ---VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
+TY + +TG S +L+D++H R +P
Sbjct: 844 SGVLTYVECLMEGDETGDCSEVIDLVDQLHCRERPT 879
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/504 (31%), Positives = 254/504 (50%), Gaps = 35/504 (6%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
++ + R M + G P+ T N ++ G+ S +S L +LKR PD TFN LI
Sbjct: 182 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 241
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
LC G ++ + G+ VTY T+++ CK G+ +AA+ELL ++ +G+
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
V YN +I LC+ ++ + L +M + I PN VTY+ LI GF G++ A LL
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 252 DEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLV 311
+EM+ + P+ VT+N L+D EG +EA M +M +G+ P V+Y L+DG C
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421
Query: 312 NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
E + AR + M R GV +Y MI GLCK +DEA+ LL EM + I P+ VTY
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
S+LI+G CK G+ A E++ ++ G + I Y++ + C+ + + I + + +I
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 432 KGIQPDMCTYNILLDGLCKCGRIKDAQE-------------------------------- 459
+G D T+N+L+ LCK G++ +A+E
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 460 ---VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
VF ++ K G++ +TY +++ GLCK G EA + + D + + T+++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 517 ALFEKGENDKAEKLLREMIARDLL 540
A+ + G KA L EM+ R +L
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSIL 685
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 255/494 (51%), Gaps = 2/494 (0%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
+M + P I+ +N VL K + AI L M+ G+ + T N+LI+ C
Sbjct: 258 KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN 317
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ + +L ++ KR HP+ +T+NTLI G GK+ A Q +++L+ G + VT+
Sbjct: 318 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 377
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
LI+G G + AL++ +E +G+ P+ V Y ++D LCK A Y M
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 437
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G+ +TY+ +I G C G L +A+ LL+EM IDPD+VTY+ L++ K G+ + A
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
K ++ + + G+ P+ + YS+L+ C + + +A ++ AM G T + ++N+++
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
LCK V EA + M + I+PN V++ LI+G +G+ A+ + DEM G
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
TY S L LCKG H+ + +K + D YN LL +CK G + A +F
Sbjct: 618 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 677
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG-CIHDPITFETIISALFEK 521
++ ++ +++TY ++I+GLC++G A+ + E G + + + + + +F+
Sbjct: 678 EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737
Query: 522 GENDKAEKLLREMI 535
G+ KA RE +
Sbjct: 738 GQW-KAGIYFREQM 750
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 258/539 (47%), Gaps = 35/539 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ D++ F M P + N +L S+VK+ + S ++M I P+ T NI
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN C G + ++ + K GY P +T+NT++ C G+ A++ D + ++G
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D TY LI+ LC+ + LLR + R I P V YNT+I+ V A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL---- 269
L +EM++ G+SPN VT++ALI G G K+A+ + M K + P V+Y +L
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 270 -------------------------------VDALGKEGKVREAKNMLAVMIKQGVKPDV 298
+D L K G + EA +L M K G+ PD+
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
VTYS+L++G+C V A+++ + R G++PN Y+ +IY C++ + EA+ + E
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M E + T++ L+ LCK GKV+ A E + M G + ++++ ++
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
K ++ ++ G P TY LL GLCK G +++A++ + L ++ YNT
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
++ +CK G +A++L +M + D T+ ++IS L KG+ A +E AR
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 242/488 (49%), Gaps = 16/488 (3%)
Query: 63 LVKTKHYSTAISLSRQMEITGITPNFV----------------TLNILINCHCYLGQTTS 106
LV+ + Y A + +++ + +FV +ILI + G
Sbjct: 122 LVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQD 181
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
+ + + G++P T N ++ + G+ F ++L + D T+ LIN
Sbjct: 182 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 241
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
LC G E + L++++E G PT+V YNT++ CK A +L M +KG+
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+V TY+ LI+ C ++ + LL +M + I P+ VTYN L++ EGKV A +L
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M+ G+ P+ VT+++L+DG+ +A +F M +G+TP+ SY +++ GLCK
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
D A M + ++TY+ +IDGLCK G + A LL+EM G DI+TY
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
++ ++ CK ++ +I G+ P+ Y+ L+ C+ G +K+A +++ +
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
+G+ +++T+N ++ LCK G EA M M +G + + ++F+ +I+ GE K
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 527 AEKLLREM 534
A + EM
Sbjct: 602 AFSVFDEM 609
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 244/499 (48%), Gaps = 1/499 (0%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
N ML ++P + FN ++ + ++ A+ + ME G+TP+ V+ +L++ C
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
+ A + + G IT+ +I GLC +G L A+ +++ G D V
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY+ LING CK+G+ + A E++ RI G+ P ++Y+T+I + C++ + A +Y M
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
I +G + + T++ L+ C G++ +A + M I P+ V+++ L++ G G+
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+A ++ M K G P TY SL+ G C + +A ++ + YN +
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
+ +CK + +A++L EM I+P+ TY+SLI GLC+ GK A E RG
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719
Query: 400 P-ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+ + Y F+D + K GI +++ + G PD+ T N ++DG + G+I+
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ ++ + N TYN +++G K + L + NG + D +T +++ +
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 519 FEKGENDKAEKLLREMIAR 537
E + K+L+ I R
Sbjct: 840 CESNMLEIGLKILKAFICR 858
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 224/439 (51%), Gaps = 1/439 (0%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
G+++ F L R + + ++ LI+ G + +L+ + GF T
Sbjct: 143 GKSSFVFGALMTTY-RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 201
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
++ + K G+ + L+ + R I P V +N +I+ LC + L +M
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 261
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
G +P +VTY+ +++ +C G+ K AI LLD M K +D DV TYN+L+ L + ++ +
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 282 AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
+L M K+ + P+ VTY++L++G+ +V A + N M G++PN ++N +I
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
G EAL + M+ + + P++V+Y L+DGLCK + A M G
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
ITY +D LCK +D+ + L+ ++ GI PD+ TY+ L++G CK GR K A+E+
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
+++ G + N Y+T+I C+ G EA+ + M G D TF ++++L +
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Query: 522 GENDKAEKLLREMIARDLL 540
G+ +AE+ +R M + +L
Sbjct: 562 GKVAEAEEFMRCMTSDGIL 580
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 249/543 (45%), Gaps = 36/543 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ V N M + I P I+ ++ ++ K + TA + ++ G++PN + +
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF-------- 145
LI C +G A + ++ G+ D TFN L+ LC GK+ A +F
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 146 ---------------------------HDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
D++ G TY +L+ GLCK G A
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+ L+ + VMYNT++ ++CK ++ A L+ EM+ + I P+ TY++LI G
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 239 CIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
C G+ AI E + N+ P+ V Y VD + K G+ + M G PD
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
+VT ++++DGY + ++ K D+ M + PN+ +YNI+++G K K V + L
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
+ I+P+K+T SL+ G+C++ + ++L RG D T+N + C
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
++ L+K + GI D T + ++ L + R ++++ V ++ K+G + + Y
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
+INGLC+ G A + +M + + ++ AL + G+ D+A LLR M+
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 538 DLL 540
L+
Sbjct: 999 KLV 1001
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 232/483 (48%), Gaps = 1/483 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ + + + M+ T FN ++TSL K + A R M GI PN V+ +
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN + G+ AFSV + K G+HP T+ +L+KGLC G L A +F + A
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+D V Y TL+ +CK G A+ L + R I P Y ++I LC+ A
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 214 DLYSEMIAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
E A+G + PN V Y+ + G GQ K I ++M PD+VT N ++D
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ GK+ + ++L M Q P++ TY+ L+ GY +V+ + ++ ++ G+ P+
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ + ++ G+C+ M++ L +L+ + ++ T++ LI C G+++ A++L+
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M G D T ++ + L + H + ++ ++ +GI P+ Y L++GLC+ G
Sbjct: 889 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
IK A V +++ N + M+ L K G DEA L+ M + +F
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 513 TII 515
T++
Sbjct: 1009 TLM 1011
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 232/505 (45%), Gaps = 1/505 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N + + F M +TP + + +L L K + A +M+ G+ +T
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I+ C G A +L + K G PD +T++ LI G C G+ A + +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + + Y+TLI C+MG + A+ + + G +N ++ SLCK V+ A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ M + GI PN V++ LI G+ G+ +A + DEM P TY L+
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K G +REA+ L + D V Y++L+ C + KA +F M +R + P+
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Query: 333 VQSYNIMIYGLC-KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+Y +I GLC K K V L E ++PNKV Y+ +DG+ K G+
Sbjct: 688 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
++M G DI+T N+ +D + ++K L+ ++ ++ P++ TYNILL G K
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
+ + +++ + G + T ++++ G+C+ + + L ++ G D TF
Sbjct: 808 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867
Query: 512 ETIISALFEKGENDKAEKLLREMIA 536
+IS GE + A L++ M +
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTS 892
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 209/416 (50%), Gaps = 21/416 (5%)
Query: 135 LHGKLHRALQFHDDVLAQ-GFQLDQVTYATLING--LCKMGQTEAALELLRRIEGRGIKP 191
+HGKL AL+F V+ Q G + D + I L + + A +L+ + K
Sbjct: 88 VHGKL--ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKS 145
Query: 192 TVV----------------MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
+ V +Y+ +I + ++ + +++ M G +P+V T +A++
Sbjct: 146 SFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 205
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G+ L EM+ + I PDV T+NIL++ L EG ++ ++ M K G
Sbjct: 206 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 265
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
P +VTY++++ YC A ++ + M +GV +V +YN++I+ LC+ + + L
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
L +M I PN+VTY++LI+G GKV A +LL+EM G + +T+N+ +D
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+ + + + + KG+ P +Y +LLDGLCK A+ + + + G + T
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
Y MI+GLCK G DEA+ L+++M +G D +T+ +I+ + G A++++
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + +N +L K K ST+ L R + + GI P+ +T + L+ C +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
L + RG D TFN LI C +G+++ A + + G LD+ T +++ L +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
+ + + +L + +GI P Y +I+ LC+V + AF + EMIA I P V
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
SA++ G+ +A LL M+ + P + ++ L+ K G V EA + VM
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 1031
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
G+K D+V+Y+ L+ G C ++ A +++ M G N +Y +I GL
Sbjct: 1032 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMD----------------YEKIIPNKVTYSSLID 376
VQ I + L + +M D A ++L+E+ Y N Y LI
Sbjct: 112 VQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIR 171
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
+ G + ++ E+ M + G + T N+ L ++ K + +K+++ + I P
Sbjct: 172 VYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICP 231
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
D+ T+NIL++ LC G + + + Q + K GY TYNT+++ CK+G F A+ L+
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 497 SKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
M+ G D T+ +I L K LLR+M R
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 332
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
+ M + I+P ++ ++ L + TA + +M I P V + ++
Sbjct: 922 LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 981
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ A +L +LK P +F TL+ C +G + AL+ + G +LD V+
Sbjct: 982 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1041
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS-LCKVKLVSHAFDLYSEM 219
Y LI GLC G A EL ++G G Y +I L + S A + ++
Sbjct: 1042 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1101
Query: 220 IAKGI 224
+A+G
Sbjct: 1102 LARGF 1106
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 201/316 (63%), Gaps = 4/316 (1%)
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+++ G PD +TF TL+ GLC G++ +AL D ++ +G Q Y T+INGLCKMG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
TE+AL LL ++E IK VV+YN IID LCK HA +L++EM KGI P+V+TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
+I FC G+ A LL +M+ + I+PDVVT++ L++AL KEGKV EA+ + M+++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+ P +TY+S++DG+C + +N A+ + ++MA + +P+V +++ +I G CK K VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
+ EM I+ N VTY++LI G C+ G + A +LL+ M G + IT+ S L +L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 414 CKGHHVDKGIALIKKI 429
C + K A+++ +
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 184/322 (57%), Gaps = 5/322 (1%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D VT+ TL+NGLC G+ AL L+ R+ G +P Y TII+ LCK+ A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L S+M I +VV Y+A+I C G A L EM K I PDV+TY+ ++D+
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ G+ +A+ +L MI++ + PDVVT+S+L++ +V++A +++ M RRG+ P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+YN MI G CK +++A +L+ M + P+ VT+S+LI+G CK +V N E+
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EMH RG A+ +TY + + C+ +D L+ +I G+ P+ T+ +L LC
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 453 RIKDAQEVFQDLFK-KGYNLNN 473
++ A + +DL K +G++L +
Sbjct: 301 ELRKAFAILEDLQKSEGHHLED 322
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 178/316 (56%), Gaps = 4/316 (1%)
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G P+VVT++ L+ G C G++ QA+ L+D MV + P Y +++ L K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
A N+L+ M + +K VV Y++++D C A+++F M +G+ P+V +Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
MI C+ +A LL +M +I P+ VT+S+LI+ L K GKVS A E+ +M RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
ITYNS +D CK ++ ++ + K PD+ T++ L++G CK R+ +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
E+F ++ ++G N TY T+I+G C+ G D A L++ M +G + ITF++++++L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 519 FEKGENDKAEKLLREM 534
K E KA +L ++
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 163/313 (52%), Gaps = 4/313 (1%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
G +P VV + T+++ LC V A L M+ +G P Y +I G C +G + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+ LL +M +I VV YN ++D L K+G A+N+ M +G+ PDV+TYS ++D
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
+C A + M R + P+V +++ +I L K V EA + +M I P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
+TY+S+IDG CK ++++A +LD M + D++T+++ ++ CK VD G+ +
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
++ +GI + TY L+ G C+ G + AQ++ + G N T+ +M+ LC +
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 488 LFDEALTLMSKME 500
+A ++ ++
Sbjct: 301 ELRKAFAILEDLQ 313
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 168/316 (53%), Gaps = 4/316 (1%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M++ P ++ F ++ L A++L +M G P +IN C +G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
T SA ++L+ + + + +N +I LC G A ++ +G D +TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
+I+ C+ G+ A +LLR + R I P VV ++ +I++L K VS A ++Y +M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
I P +TY+++I GFC +L A +LD M K+ PDVVT++ L++ K +V
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
+ M ++G+ + VTY++L+ G+C V +++ A+D+ N M GV PN ++ M+ L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 344 CKIKMVDEALNLLEEM 359
C K + +A +LE++
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 143/252 (56%), Gaps = 4/252 (1%)
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
M++ G +PDVVT+++LM+G C V +A + + M G P Y +I GLCK+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
+ ALNLL +M+ I + V Y+++ID LCK G +A L EMH +G D+ITY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
+D+ C+ L++ +I++ I PD+ T++ L++ L K G++ +A+E++ D+ ++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
TYN+MI+G CK+ ++A ++ M C D +TF T+I+ + D
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 529 KLLREMIARDLL 540
++ EM R ++
Sbjct: 237 EIFCEMHRRGIV 248
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 156/283 (55%), Gaps = 4/283 (1%)
Query: 254 MVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNE 313
MV PDVVT+ L++ L EG+V +A ++ M+++G +P Y ++++G C + +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
A ++ + M + +V YN +I LCK A NL EM + I P+ +TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
+ID C++G+ ++A +LL +M R D++T+++ ++AL K V + + ++ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 493
I P TYN ++DG CK R+ DA+ + + K + + T++T+ING CK D +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 494 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+ +M G + + +T+ T+I + G+ D A+ LL MI+
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 141/250 (56%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ + ++ ++M + I ++ +N ++ L K H+ A +L +M GI P+ +T +
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I+ C G+ T A +L ++++R +PD +TF+ LI L GK+ A + + D+L +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G +TY ++I+G CK + A +L + + P VV ++T+I+ CK K V +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ EM +GI N VTY+ LI+GFC VG L A LL+ M+ + P+ +T+ ++ +
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 273 LGKEGKVREA 282
L + ++R+A
Sbjct: 296 LCSKKELRKA 305
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 119/216 (55%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
+ F M I P +I ++ ++ S ++ ++ A L R M I P+ VT + LIN
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
G+ + A + ++L+RG P TIT+N++I G C +L+ A + D + ++ D
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
VT++TLING CK + + +E+ + RGI V Y T+I C+V + A DL +
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
MI+ G++PN +T+ +++ C +L++A +L+++
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 95/184 (51%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D M++ +I P ++ F+ ++ +LVK S A + M GI P +T N +I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ C + A +L ++ + PD +TF+TLI G C ++ ++ ++ +G
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ VTY TLI+G C++G +AA +LL + G+ P + + +++ SLC K + AF +
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 216 YSEM 219
++
Sbjct: 309 LEDL 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 15 NPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAIS 74
NP+ V + + ML+ I P I +N ++ K + A
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 75 LSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLC 134
+ M +P+ VT + LIN +C + + + + +RG +T+T+ TLI G C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 135 LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC---KMGQTEAALELLRRIEGRGIK 190
G L A + +++ G + +T+ +++ LC ++ + A LE L++ EG ++
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHHLE 321
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 259/511 (50%), Gaps = 27/511 (5%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + +N +L S +K + L + M + GI P T N+LI C +A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ ++G P+ TF L++G C G + L+ + + + G ++V Y T+++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK---GIS-P 226
G+ + + +++ ++ G+ P +V +N+ I +LCK V A ++S+M G+ P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
N +TY+ ++ GFC VG L+ A L + + + + +YNI + L + GK EA+ +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M +G+ P + +Y+ LMDG C + ++ A+ + M R GV P+ +Y +++G C +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
VD A +LL+EM +PN T + L+ L K G++S A ELL +M+ +G D +T
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 407 NSFLDALCKGHHVDKGIALIK-----------------------KIIDKGIQPDMCTYNI 443
N +D LC +DK I ++K +I+ PD+ TY+
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
LL+GLCK GR +A+ +F ++ + ++ YN I+ CK+G A ++ ME G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 504 CIHDPITFETIISALFEKGENDKAEKLLREM 534
C T+ ++I L K + + L+ EM
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 265/566 (46%), Gaps = 63/566 (11%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD F+ M + P F ++ K + L ME G+ PN V N
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+++ C G+ + ++ + + G PD +TFN+ I LC GK+ A + D+
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 154 F----QLDQVTYATLINGLCKMGQTEAALEL----------------------------- 180
+ + + +TY ++ G CK+G E A L
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 181 ------LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
L+++ +GI P++ YN ++D LCK+ ++S A + M G+ P+ VTY L
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
++G+C VG++ A LL EM+ N P+ T NIL+ +L K G++ EA+ +L M ++G
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT-----------------------P 331
D VT + ++DG C E++KA ++ M G P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
++ +Y+ ++ GLCK EA NL EM EK+ P+ V Y+ I CK GK+S+A+ +L
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+M +G + TYNS + L + + + L+ ++ +KGI P++CTYN + LC+
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
+++DA + ++ +K N +++ +I CK FD A + + + C +
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLY 701
Query: 512 ETIISALFEKGENDKAEKLLREMIAR 537
+ + L G+ KA +LL ++ R
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDR 727
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 145/598 (24%), Positives = 259/598 (43%), Gaps = 96/598 (16%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
D + N M + P + +N +++S + + + +M G+ P+ VT N
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 94 LINCHCYLGQTTSAFSVLANILKRGY----HPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
I+ C G+ A + +++ Y P++IT+N ++KG C G L A + +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
+Y + GL + G+ A +L+++ +GI P++ YN ++D LCK+ ++
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP-------- 261
S A + M G+ P+ VTY L++G+C VG++ A LL EM+ N P
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 262 ---------------------------DVVTYNILVDALGKEGKVREAKNMLAVM----- 289
D VT NI+VD L G++ +A ++ M
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 290 ------------------IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
I+ PD++TYS+L++G C +A+++F M + P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+ +YNI I+ CK + A +L++M+ + + TY+SLI GL ++ L+
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
DEM +G +I TYN+ + LC+G V+ L+ +++ K I P++ ++ L++ CK
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Query: 452 GRIKDAQEVFQD----------------------------------LFKKGYNLNNWTYN 477
AQEVF+ + +G+ L + Y
Sbjct: 678 PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
++ LCK+ + A ++ KM D G DP +I L + G +A +M+
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 213/423 (50%), Gaps = 8/423 (1%)
Query: 120 HPDTITFNTLIKGLCLHGKLHRALQ-FHDDVLAQGFQLDQVT-YATLINGLCKMGQTEAA 177
H ++ I + + K+H +Q H+ +L+ Q +++ ++++ K + A
Sbjct: 35 HGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKA 94
Query: 178 LELLRRIEGR--GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
+ + R KP+V +YN +++S K + V LY +M+ GI+P T++ LI
Sbjct: 95 FPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLI 154
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
C + A L DEM K P+ T+ ILV K G + +L M GV
Sbjct: 155 RALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL 214
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
P+ V Y++++ +C + + + M G+ P++ ++N I LCK V +A +
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 356 LEEMDYEKII----PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
+M+ ++ + PN +TY+ ++ G CK G + +A L + + A + +YN +L
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQ 334
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
L + + ++K++ DKGI P + +YNIL+DGLCK G + DA+ + + + G
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
+ TY +++G C G D A +L+ +M N C+ + T ++ +L++ G +AE+LL
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 532 REM 534
R+M
Sbjct: 455 RKM 457
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 40/292 (13%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VDD+ +++ P +I ++ +L L K ++ A +L +M + P+ V NI
Sbjct: 511 VDDS------LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
I+ C G+ +SAF VL ++ K+G H T+N+LI GL + ++ D++ +G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVK---LVS 210
+ TY T I LC+ + E A LL + + I P V + +I++ CKV +
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684
Query: 211 HAFD---------------LYSEMIA----------------KGISPNVVTYSALIYGFC 239
F+ +++E++A +G Y L+ C
Sbjct: 685 EVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLC 744
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+L+ A G+L +M+ + D ++D LGK G +EA + M++
Sbjct: 745 KKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 250/495 (50%), Gaps = 2/495 (0%)
Query: 41 FNRMLQMR-ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
F+R++ R I+ NKVL L + + LS ++ G PN VT LIN C
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLD-CGPAPNVVTFCTLINGFC 297
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G+ AF + + +RG PD I ++TLI G G L + L +G +LD V
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+++ I+ K G A + +R+ +GI P VV Y +I LC+ + AF +Y ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ +G+ P++VTYS+LI GFC G L+ L ++M+ PDVV Y +LVD L K+G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
A M+ Q ++ +VV ++SL+DG+C +N ++A VF M G+ P+V ++ +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
+ ++EAL L M + P+ + Y +LID CK K + +L D M
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
ADI N + L K H ++ +I+ ++PD+ TYN ++ G C R+ +A+
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+F+ L + N T +I+ LCK D A+ + S M + G + +T+ ++
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 520 EKGENDKAEKLLREM 534
+ + + + KL EM
Sbjct: 718 KSVDIEGSFKLFEEM 732
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 230/467 (49%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F++ L + ++ F+ + VK+ +TA + ++M GI+PN VT ILI C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ AF + ILKRG P +T+++LI G C G L ++D++ G+ D V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y L++GL K G A+ ++ G+ I+ VV++N++ID C++ A ++ M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
GI P+V T++ ++ + G+L++A+ L M ++PD + Y L+DA K K
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+ +M + + D+ + ++ + + A FN + + P++ +YN MI
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G C ++ +DEA + E + PN VT + LI LCK + A + M +G
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ +TY +D K ++ L +++ +KGI P + +Y+I++DGLCK GR+ +A +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
F + Y +I G CK G EA L M NG D
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 208/435 (47%), Gaps = 71/435 (16%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
+ RML I+P ++ + ++ L + A + Q+ G+ P+ VT + LI+ C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G S F++ +++K GY PD + + L+ GL G + A++F +L Q +L+ V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 161 YATLINGLCKMGQTEAALELLRRI---------------------EGR------------ 187
+ +LI+G C++ + + AL++ R + EGR
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 188 --GIKPTVVMYNTIIDSLCK-------------------------VKLVSH--------- 211
G++P + Y T+ID+ CK +V H
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 212 -AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A ++ +I + P++VTY+ +I G+C + +L +A + + + + P+ VT IL+
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
L K + A M ++M ++G KP+ VTY LMD + ++ + +F M +G++
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
P++ SY+I+I GLCK VDEA N+ + K++P+ V Y+ LI G CK G++ A L
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 391 LDEMHVRG-QPADII 404
+ M G +P D++
Sbjct: 799 YEHMLRNGVKPDDLL 813
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 241/497 (48%), Gaps = 17/497 (3%)
Query: 55 EFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTL-NILINCHCY----------LGQ 103
E N VL SL ++A+ R EI+G P+F T+ ++LI + +
Sbjct: 71 ETNLVLLSL--ESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITN 128
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
F+VL +I R D F L++ C +G + +AL+ G + Q +
Sbjct: 129 RGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR 186
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPT-VVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
++N L + + + ++ GI+P+ V + ++D+L V+ A D + ++ +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G +V+ + ++ G V Q++ A LL ++ P+VVT+ L++ K G++ A
Sbjct: 247 GFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
++ VM ++G++PD++ YS+L+DGY + +F+ +GV +V ++ I
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
K + A + + M + I PN VTY+ LI GLC+ G++ A+ + ++ RG
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
I+TY+S +D CK ++ G AL + +I G PD+ Y +L+DGL K G + A
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
+ + LN +N++I+G C+ FDEAL + M G D TF T++ +G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 523 ENDKAEKLLREMIARDL 539
++A L M L
Sbjct: 546 RLEEALFLFFRMFKMGL 562
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 156/339 (46%), Gaps = 2/339 (0%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
+ F +ML I ++ FN ++ + + A+ + R M I GI P+ T ++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
G+ A + + K G PD + + TLI C H K LQ D +
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 157 DQVTYATLINGLCKMGQTEAALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D +I+ L K + E A + IEG+ ++P +V YNT+I C ++ + A +
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ + PN VT + LI+ C + AI + M K P+ VTY L+D K
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+ + + M ++G+ P +V+YS ++DG C V++A ++F+ + P+V +
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
Y I+I G CK+ + EA L E M + P+ + +L
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 19/310 (6%)
Query: 3 SWLRLKRFP-----------FLSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITP 51
W RL RF + P+ +++ + F RM +M + P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 52 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN----CHCYLGQTTSA 107
+ + ++ + K + + L M+ I+ + N++I+ CH + A
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH----RIEDA 620
Query: 108 FSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLING 167
N+++ PD +T+NT+I G C +L A + + + F + VT LI+
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
LCK + A+ + + +G KP V Y ++D K + +F L+ EM KGISP+
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
+V+YS +I G C G++ +A + + + + PDVV Y IL+ K G++ EA +
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Query: 288 VMIKQGVKPD 297
M++ GVKPD
Sbjct: 801 HMLRNGVKPD 810
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Query: 7 LKRFPFLSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKT 66
LK PF PN ++D + F+ M + P + + ++ K+
Sbjct: 662 LKVTPF--GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 67 KHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITF 126
+ L +M+ GI+P+ V+ +I+I+ C G+ A ++ + PD + +
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 779
Query: 127 NTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
LI+G C G+L A ++ +L G + D + L
Sbjct: 780 AILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 256/483 (53%), Gaps = 2/483 (0%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N ++ SLV+ A + +++ +G+ N TLNI++N C G+ + L+ + +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
+G +PD +T+NTLI G + A + + + +GF TY T+INGLCK G+ E
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
A E+ + G+ P Y +++ CK V ++S+M ++ + P++V +S+++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
F G L +A+ + + + PD V Y IL+ ++G + A N+ M++QG
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
DVVTY++++ G C + +A +FN M R + P+ + I+I G CK+ + A+ L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
++M ++I + VTY++L+DG K G + A E+ +M + I+Y+ ++ALC
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
H+ + + ++I K I+P + N ++ G C+ G D + + + +G+ + +Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDN--GCIHDPITFETIISALFEKGENDKAEKLLREM 534
NT+I G +E +A L+ KME+ G + D T+ +I+ + + +AE +LR+M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 535 IAR 537
I R
Sbjct: 684 IER 686
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 239/479 (49%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
F+ ++ + V+ + A + G T + N LI +G A+ V I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G + T N ++ LC GK+ + F V +G D VTY TLI+ G E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A EL+ + G+G P V YNT+I+ LCK A ++++EM+ G+SP+ TY +L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
C G + + + +M +++ PD+V ++ ++ + G + +A + + G+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
PD V Y+ L+ GYC ++ A ++ N M ++G +V +YN +++GLCK KM+ EA L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
EM + P+ T + LIDG CK G + NA EL +M + D++TYN+ LD K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+D + ++ K I P +Y+IL++ LC G + +A V+ ++ K
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
N+MI G C+ G + + + KM G + D I++ T+I + KA L+++M
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 247/467 (52%), Gaps = 2/467 (0%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
+F +++ + + P I+ +N ++++ A L M G +P T N +IN
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
C G+ A V A +L+ G PD+ T+ +L+ C G + + D+ ++ D
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
V ++++++ + G + AL ++ G+ P V+Y +I C+ ++S A +L +E
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ +G + +VVTY+ +++G C L +A L +EM + + PD T IL+D K G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
++ A + M ++ ++ DVVTY++L+DG+ V +++ A++++ M + + P SY+I
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
++ LC + EA + +EM + I P + +S+I G C++G S+ L++M G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDK--GIQPDMCTYNILLDGLCKCGRIKD 456
D I+YN+ + + ++ K L+KK+ ++ G+ PD+ TYN +L G C+ ++K+
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
A+ V + + ++G N + TY MING + EA + +M G
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 223/439 (50%), Gaps = 2/439 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ N M +P + +N V+ L K Y A + +M +G++P+ T
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ C G V +++ R PD + F++++ G L +AL + + V G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D V Y LI G C+ G A+ L + +G VV YNTI+ LCK K++ A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L++EM + + P+ T + LI G C +G L+ A+ L +M K I DVVTYN L+D
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
GK G + AK + A M+ + + P ++YS L++ C + +A V++ M + + P V
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
N MI G C+ + + LE+M E +P+ ++Y++LI G + +S A+ L+ +
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 394 MHVR--GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
M G D+ TYNS L C+ + + + +++K+I++G+ PD TY +++G
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 452 GRIKDAQEVFQDLFKKGYN 470
+ +A + ++ ++G++
Sbjct: 706 DNLTEAFRIHDEMLQRGFS 724
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 219/414 (52%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
F+ LI+ KL A + + ++GF + LI L ++G E A + + I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
G+ V N ++++LCK + S++ KG+ P++VTY+ LI + G ++
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+A L++ M K P V TYN +++ L K GK AK + A M++ G+ PD TY SL+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
C +V + VF+ M R V P++ ++ M+ + +D+AL + +I
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
P+ V Y+ LI G C+ G +S A L +EM +G D++TYN+ L LCK + + L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
++ ++ + PD T IL+DG CK G +++A E+FQ + +K L+ TYNT+++G K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
G D A + + M + PI++ +++AL KG +A ++ EMI++++
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 219/440 (49%), Gaps = 3/440 (0%)
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
L + AF++L + +G+ N LI L G + A + ++ G ++ T
Sbjct: 181 LREAHEAFTLLRS---KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT 237
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
++N LCK G+ E L +++ +G+ P +V YNT+I + L+ AF+L + M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
KG SP V TY+ +I G C G+ ++A + EM+ + PD TY L+ K+G V
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
E + + + M + V PD+V +SS+M + ++KA FN++ G+ P+ Y I+I
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G C+ M+ A+NL EM + + VTY++++ GLCK + A +L +EM R
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
D T +D CK ++ + L +K+ +K I+ D+ TYN LLDG K G I A+E+
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
+ D+ K +Y+ ++N LC +G EA + +M + ++I
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 521 KGENDKAEKLLREMIARDLL 540
G E L +MI+ +
Sbjct: 598 SGNASDGESFLEKMISEGFV 617
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 201/372 (54%), Gaps = 2/372 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V +T F+ M + P ++ F+ +++ ++ + A+ ++ G+ P+ V
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI +C G + A ++ +L++G D +T+NT++ GLC L A + +++ +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D T LI+G CK+G + A+EL ++++ + I+ VV YNT++D KV + A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++++M++K I P ++YS L+ C G L +A + DEM+ KNI P V+ N ++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR--GVT 330
+ G + ++ L MI +G PD ++Y++L+ G+ ++KA + M G+
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
P+V +YN +++G C+ + EA +L +M + P++ TY+ +I+G ++ A+ +
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 391 LDEMHVRGQPAD 402
DEM RG D
Sbjct: 715 HDEMLQRGFSPD 726
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 180/404 (44%), Gaps = 52/404 (12%)
Query: 154 FQLDQVTYATLINGLCKMGQ-TEAALELLRRIEGRGIKPTVVM----------------Y 196
F+ ++ + +I+ L + G+ ++A LLR I G+ ++ +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 197 NTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL 256
+ +I + + + + A + ++ + +KG + ++ +ALI +G ++ A G+ E+
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 257 KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK 316
+ +V T NI+V+AL K+G ++ K
Sbjct: 229 SGVGINVYTLNIMVNALCKDG-----------------------------------KMEK 253
Query: 317 ARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID 376
+ + +GV P++ +YN +I +++EA L+ M + P TY+++I+
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
GLCK GK A E+ EM G D TY S L CK V + + + + + P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
D+ ++ ++ + G + A F + + G +N Y +I G C++G+ A+ L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 497 SKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
++M GC D +T+ TI+ L ++ +A+KL EM R L
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 261/530 (49%), Gaps = 38/530 (7%)
Query: 35 DDTVSFFNRMLQM-RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
D + F RM ++ P I +N +L + V+ K + SL E G+ PN T N+
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI C + A L + K G+ PD +++T+I L GKL AL+ D++ +G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTV------------------- 193
D Y LI+G K + A+EL R+ E + P V
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 194 ----------------VMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
Y+++I LC V A +++E+ + S +VVTY+ ++ G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
FC G++K+++ L M KN ++V+YNIL+ L + GK+ EA + +M +G D
Sbjct: 335 FCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
TY + G C+ VNKA V + G +V +Y +I LCK K ++EA NL++
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
EM + N ++LI GL + ++ A L EM G +++YN + LCK
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+ A +K++++ G +PD+ TY+ILL GLC+ +I A E++ + G + +N
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHN 573
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
+I+GLC G D+A+T+M+ ME C + +T+ T++ F+ G++++A
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 232/466 (49%), Gaps = 2/466 (0%)
Query: 75 LSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLC 134
R EI G P + N L+N Q S+ A G P+ T+N LIK C
Sbjct: 101 FKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC 160
Query: 135 LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVV 194
+ +A F D + +GF+ D +Y+T+IN L K G+ + ALEL + RG+ P V
Sbjct: 161 KKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIA-KGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 253
YN +ID K K A +L+ ++ + PNV T++ +I G G++ + + +
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWER 280
Query: 254 MVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNE 313
M + D+ TY+ L+ L G V +A+++ + ++ DVVTY++++ G+C +
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
+ ++ +++ M + + N+ SYNI+I GL + +DEA + M + +K TY
Sbjct: 341 IKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
I GLC G V+ A ++ E+ G D+ Y S +D LCK +++ L+K++ G
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 493
++ + N L+ GL + R+ +A +++ K G +YN +I GLCK G F EA
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 494 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ +M +NG D T+ ++ L + D A +L + + L
Sbjct: 520 AFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 241/489 (49%), Gaps = 2/489 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISL-SRQMEITGITPNFVTLN 92
+DD + F+ M + + P + +N ++ +K K + TA+ L R +E + + PN T N
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+I+ G+ + + + D T+++LI GLC G + +A +++ +
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+D VTY T++ G C+ G+ + +LEL R +E + +V YN +I L + + A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEA 378
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ M AKG + + TY I+G C+ G + +A+G++ E+ DV Y ++D
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K+ ++ EA N++ M K GV+ + ++L+ G + + +A M + G P
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPT 498
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V SYNI+I GLCK EA ++EM P+ TYS L+ GLC+ K+ A EL
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
+ G D++ +N + LC +D + ++ + + ++ TYN L++G K G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
A ++ ++K G + +YNT++ GLC A+ ++G T+
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 513 TIISALFEK 521
++ A+ +
Sbjct: 679 ILVRAVVNR 687
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 188/381 (49%), Gaps = 1/381 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NVD S FN + + + + ++ +N +L + ++ L R ME + N V+ N
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 363
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI G+ A + + +GY D T+ I GLC++G +++AL +V +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G LD YA++I+ LCK + E A L++ + G++ + N +I L + + A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
EM G P VV+Y+ LI G C G+ +A + EM+ PD+ TY+IL+
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L ++ K+ A + ++ G++ DV+ ++ L+ G C V +++ A V M R T N
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ +YN ++ G K+ + A + M + P+ ++Y++++ GLC VS A E D
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 393 EMHVRGQPADIITYNSFLDAL 413
+ G + T+N + A+
Sbjct: 664 DARNHGIFPTVYTWNILVRAV 684
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/543 (28%), Positives = 274/543 (50%), Gaps = 47/543 (8%)
Query: 38 VSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEI------TGITPNFVTL 91
+ F +M+++++ P ++ N +L LV+ Y ++ S+S E+ G++ N T
Sbjct: 151 LQIFQKMIRLKLKPNLLTCNTLLIGLVR---YPSSFSISSAREVFDDMVKIGVSLNVQTF 207
Query: 92 NILINCHCYLGQTTSAFSVLANILKR-GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
N+L+N +C G+ A +L ++ +PD +T+NT++K + G+L + D+
Sbjct: 208 NVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMK 267
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
G ++VTY L+ G CK+G + A +++ ++ + P + YN +I+ LC +
Sbjct: 268 KNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMR 327
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM---------VLKNID- 260
+L M + + P+VVTY+ LI G +G +A L+++M V NI
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISL 387
Query: 261 --------------------------PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
PD+VTY+ L+ A K G + A M+ M ++G+
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
K + +T ++++D C ++++A ++ N+ +RG + +Y +I G + + V++AL
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
+ +EM KI P T++SLI GLC GK A E DE+ G D T+NS + C
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
K V+K + I +PD T NILL+GLCK G + A F L ++ ++
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-REVDTV 626
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
TYNTMI+ CK+ EA L+S+ME+ G D T+ + IS L E G+ + ++LL++
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Query: 535 IAR 537
+
Sbjct: 687 SGK 689
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 209/442 (47%), Gaps = 25/442 (5%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M Q + P + +N ++ L + L M+ + P+ VT N LI+ LG
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL-QFHDDVLAQGFQLDQVTYA 162
+ A ++ + G + +T N +K LC K + + V GF D VTY
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
TLI K+G ALE++R + +GIK + NTI+D+LCK + + A +L + +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G + VTY LI GF ++++A+ + DEM I P V T+N L+ L GK A
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ + G+ PD T++S++ GYC V KA + +N + P+ + NI++ G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
LCK M ++ALN + E+ + + VTY+++I CK K+ A++LL EM +G D
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDK-----------------------GIQPDMC 439
TYNSF+ L + + + L+KK K + +
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAI 719
Query: 440 TYNILLDGLCKCGRIKDAQEVF 461
Y+ ++D LC GR+K+ +
Sbjct: 720 AYSDVIDELCSRGRLKEHSRSY 741
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 215/409 (52%), Gaps = 40/409 (9%)
Query: 172 GQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL---VSHAFDLYSEMIAKGISPNV 228
G+ AL++ +++ +KP ++ NT++ L + +S A +++ +M+ G+S NV
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILVDALGKEGKVREAKNMLA 287
T++ L+ G+C+ G+L+ A+G+L+ MV + ++PD VTYN ++ A+ K+G++ + K +L
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M K G+ P+ VTY++L+ GYC + + +A + M + V P++ +YNI+I GLC
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
+ E L L++ M K+ P+ VTY++LIDG + G A +L+++M G A+ +T+N
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 408 SFLDALCKGHHVDKGIALIKKIID-KGIQPDMCTY------------------------- 441
L LCK + +K+++D G PD+ TY
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 442 ----------NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 491
N +LD LCK ++ +A + K+G+ ++ TY T+I G +E ++
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 492 ALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
AL + +M+ TF ++I L G+ + A + E+ LL
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 13/248 (5%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+ + ++ M +++ITP + FN ++ L A+ ++ +G+ P+ T N
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I +C G+ AF +K + PD T N L+ GLC G +AL F + ++ +
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
++D VTY T+I+ CK + + A +LL +E +G++P YN+ I L + +S
Sbjct: 622 -EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+L + K + ++ + + A E ++ + + Y+ ++D L
Sbjct: 681 ELLKKFSGK--------FGSMKRDLQVETEKNPATSESKE----ELNTEAIAYSDVIDEL 728
Query: 274 GKEGKVRE 281
G+++E
Sbjct: 729 CSRGRLKE 736
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 238/467 (50%), Gaps = 1/467 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N +++ M++ P +I K++ ++ A+ + +E G P+ N
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYN 162
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN C + + A VL + + + PDT+T+N +I LC GKL AL+ + +L+
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
Q +TY LI G + AL+L+ + RG+KP + YNTII +CK +V A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
F++ + KG P+V++Y+ L+ G+ ++ L+ +M + DP+VVTY+IL+
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L ++GK+ EA N+L +M ++G+ PD +Y L+ +C ++ A + M G P+
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ +YN ++ LCK D+AL + ++ PN +Y+++ L +G A ++
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM G D ITYNS + LC+ VD+ L+ + P + TYNI+L G CK
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
RI+DA V + + G N TY +I G+ G EA+ L + +
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 220/416 (52%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + +N ++ K A + +M +P+ VT NI+I C G+ A V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
L +L P IT+ LI+ L G + AL+ D++L++G + D TY T+I G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G + A E++R +E +G +P V+ YN ++ +L L ++M ++ PNVVT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
YS LI C G++++A+ LL M K + PD +Y+ L+ A +EG++ A L MI
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
G PD+V Y++++ C + ++A ++F + G +PN SYN M L
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
AL+++ EM I P+++TY+S+I LC+ G V A+ELL +M ++TYN L
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
CK H ++ I +++ ++ G +P+ TY +L++G+ G +A E+ DL +
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 248/481 (51%), Gaps = 1/481 (0%)
Query: 58 KVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKR 117
K+ ++ +Y ++ L M G P+ + LI L A V+ IL++
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
PD +N LI G C ++ A + D + ++ F D VTY +I LC G+ + A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
L++L ++ +PTV+ Y +I++ V A L EM+++G+ P++ TY+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
C G + +A ++ + LK +PDV++YNIL+ AL +GK E + ++ M + P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
VVTYS L+ C ++ +A ++ M +G+TP+ SY+ +I C+ +D A+ LE
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
M + +P+ V Y++++ LCK GK A E+ ++ G + +YN+ AL
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+ + +I +++ GI PD TYN ++ LC+ G + +A E+ D+ ++ + TYN
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
++ G CK ++A+ ++ M NGC + T+ +I + G +A +L +++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 538 D 538
D
Sbjct: 573 D 573
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 142/279 (50%), Gaps = 1/279 (0%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
+M + P ++ ++ ++T+L + A++L + M+ G+TP+ + + LI C G
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ A L ++ G PD + +NT++ LC +GK +AL+ + G + +Y
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
T+ + L G AL ++ + GI P + YN++I LC+ +V AF+L +M +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
P+VVTY+ ++ GFC +++ AI +L+ MV P+ TY +L++ +G G EA
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
+ +++ + ++ L + L+N + ++ F
Sbjct: 563 MELANDLVRIDAISE-YSFKRLHRTFPLLNVLQRSSQTF 600
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%)
Query: 5 LRLKRFPFLSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLV 64
L K F +PN +++ ++ M + +TP ++ ++ +
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 65 KTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTI 124
+ AI M G P+ V N ++ C G+ A + + + G P++
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
++NT+ L G RAL ++++ G D++TY ++I+ LC+ G + A ELL +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
P+VV YN ++ CK + A ++ M+ G PN TY+ LI G G
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 245 KQAIGLLDEMV 255
+A+ L +++V
Sbjct: 560 AEAMELANDLV 570
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 237/426 (55%), Gaps = 7/426 (1%)
Query: 108 FSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLING 167
+ V ++ + G+ P+ T+N L+K LC + K+ A + ++ +G D V+Y T+I+
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
+C++G + EL R E P V +YN +I+ LCK AF+L EM+ KGISPN
Sbjct: 226 MCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
V++YS LI C GQ++ A L +M+ + P++ T + LV G +A ++
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 288 VMIKQ-GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
MI+ G++P+VV Y++L+ G+C + KA VF+ M G +PN+++Y +I G K
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
+D A+ + +M PN V Y+++++ LC+ K A L++ M + T+
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKG-IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
N+F+ LC +D + +++ + P++ TYN LLDGL K RI++A + +++F
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 525
+G ++ TYNT+++G C GL AL L+ KM +G D IT II A ++G+ +
Sbjct: 521 MRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAE 580
Query: 526 KAEKLL 531
+A ++L
Sbjct: 581 RAAQML 586
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 250/510 (49%), Gaps = 9/510 (1%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+ V F R+ + P + +N VL +L+ + R M+ G PN T N+L
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+ C + A +L + +G PD +++ T+I +C G + + LA+ F
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERF 242
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ Y LINGLCK + A EL+R + +GI P V+ Y+T+I+ LC + AF
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILVDAL 273
++M+ +G PN+ T S+L+ G + G A+ L ++M+ + P+VV YN LV
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
G + +A ++ + M + G P++ TY SL++G+ ++ A ++N M G PNV
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
Y M+ LC+ EA +L+E M E P+ T+++ I GLC G++ A ++ +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 394 MHVRGQ-PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M + + P +I+TYN LD L K + +++ L ++I +G++ TYN LL G C G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME--DNGCIHDPIT 510
A ++ + G + + T N +I CK+G + A ++ + D I+
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 511 FETIISALFEKGENDKAEKLLREMIARDLL 540
+ +I L + LL MI+ ++
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIV 632
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 223/452 (49%), Gaps = 9/452 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD M P + + V++S+ + L+ + E P N
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNA 251
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN C AF ++ ++++G P+ I+++TLI LC G++ A F +L +G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ T ++L+ G G T AL+L + I G G++P VV YNT++ C + A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++S M G SPN+ TY +LI GF G L A+ + ++M+ P+VV Y +V+A
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG-VTP 331
L + K +EA++++ +M K+ P V T+++ + G C ++ A VF M ++ P
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
N+ +YN ++ GL K ++EA L E+ + + TY++L+ G C G A +L+
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII--DKGIQPDMCTYNILLDGLC 449
+M V G+ D IT N + A CK ++ ++ + + +PD+ +Y ++ GLC
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
+ +D + + + G + T++ +IN
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 207/414 (50%), Gaps = 10/414 (2%)
Query: 124 ITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR 183
+TF +I+ L + G++ + QGF + + ++I+ ++G E A+E+ R
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
I+ G P+V +YN ++D+L + + +Y +M G PNV TY+ L+ C +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+ A LL EM K PD V+Y ++ ++ + G V+E + + + +P V Y++
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNA 251
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L++G C ++ A ++ M +G++PNV SY+ +I LC ++ A + L +M
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG---QPADIITYNSFLDALCKGHHVD 420
PN T SSL+ G G +A +L ++M +RG QP +++ YN+ + C ++
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQM-IRGFGLQP-NVVAYNTLVQGFCSHGNIV 369
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
K +++ + + G P++ TY L++G K G + A ++ + G N Y M+
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
LC+ F EA +L+ M C TF I L + G D AEK+ R+M
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 220/490 (44%), Gaps = 44/490 (8%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFS 109
TP + F ++ L + L +QM++ G + +I+ + +G A
Sbjct: 75 TP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVE 132
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+ I + G P +N ++ L ++ + D+ GF+ + TY L+ LC
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K + + A +LL + +G P V Y T+I S+C+V LV +L A+ P V
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVS 247
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
Y+ALI G C K A L+ EMV K I P+V++Y+ L++ L G++ A + L M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR-GVTPNVQSYNIMIYGLCKIKM 348
+K+G P++ T SSL+ G L A D++N M R G+ PNV
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV--------------- 352
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
V Y++L+ G C G + A + M G +I TY S
Sbjct: 353 --------------------VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
++ K +D + + K++ G P++ Y +++ LC+ + K+A+ + + + K+
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEKGENDKA 527
+ T+N I GLC G D A + +ME + C + +T+ ++ L + ++A
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 528 EKLLREMIAR 537
L RE+ R
Sbjct: 513 YGLTREIFMR 522
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 12/296 (4%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ VS F+ M ++ +P I + ++ K A+ + +M +G PN V
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++ C + A S++ + K P TFN IKGLC G+L A + V Q
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA----EKVFRQ 482
Query: 153 GFQLDQ-----VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVK 207
Q + VTY L++GL K + E A L R I RG++ + YNT++ C
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 208 LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL--KNIDPDVVT 265
L A L +M+ G SP+ +T + +I +C G+ ++A +LD + + PDV++
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
Y ++ L + + +L MI G+ P + T+S L++ + +++++ +A D F
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF-ILDDIVRAHDQF 657
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 233/440 (52%), Gaps = 1/440 (0%)
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+G+ A ++ ++ +G P +IT N +++ G + A D++ +G D +
Sbjct: 160 IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y ++ G + G+ + A L + RG P I+ +LC+ LV+ A + +MI
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
G PN++ +++LI G C G +KQA +L+EMV P+V T+ L+D L K G
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 281 EAKNMLAVMIKQGV-KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+A + +++ KP+V TY+S++ GYC +++N+A +F+ M +G+ PNV +Y +
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I G CK A L+ M E +PN TY++ ID LCK + A+ELL++ G
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
AD +TY + CK + +++ +A ++ G + DM NIL+ C+ ++K+++
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+FQ + G TY +MI+ CKEG D AL M+ +GC+ D T+ ++IS L
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 520 EKGENDKAEKLLREMIARDL 539
+K D+A KL MI R L
Sbjct: 580 KKSMVDEACKLYEAMIDRGL 599
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 235/464 (50%), Gaps = 1/464 (0%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
A+ + M+ G+TP+ +T+N ++ LG A +V + RG PD+ ++ ++
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
G GK+ A ++ ++ +GF D T ++ LC+ G A+ R++ G KP
Sbjct: 226 GCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKP 285
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
++ + ++ID LCK + AF++ EM+ G PNV T++ALI G C G ++A L
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 252 DEMVLKNI-DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
++V + P+V TY ++ KE K+ A+ + + M +QG+ P+V TY++L++G+C
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
+A ++ N M G PN+ +YN I LCK EA LL + + + VT
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 465
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
Y+ LI CK ++ A M+ G AD+ N + A C+ + + L + ++
Sbjct: 466 YTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVV 525
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
G+ P TY ++ CK G I A + F ++ + G +++TY ++I+GLCK+ + D
Sbjct: 526 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 585
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
EA L M D G +T T+ ++ ++ A LL +
Sbjct: 586 EACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 221/456 (48%), Gaps = 5/456 (1%)
Query: 83 GITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA 142
G P+ T +++ C G A ++ G+ P+ I F +LI GLC G + +A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 143 LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL-LRRIEGRGIKPTVVMYNTIID 201
+ ++++ G++ + T+ LI+GLCK G TE A L L+ + KP V Y ++I
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 202 SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP 261
CK ++ A L+S M +G+ PNV TY+ LI G C G +A L++ M + P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
++ TYN +D+L K+ + EA +L G++ D VTY+ L+ C N++N+A F
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 486
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
M + G +++ NI+I C+ K + E+ L + + +IP K TY+S+I CK
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKE 546
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G + A + M G D TY S + LCK VD+ L + +ID+G+ P T
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 606
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
L CK +A + + L KK L T T++ LC E A K+ +
Sbjct: 607 VTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 663
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
D +T +A E G+N+ L E I+R
Sbjct: 664 KDSSADRVTLAAFTTACSESGKNNLVTDLT-ERISR 698
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 197/421 (46%), Gaps = 4/421 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+ + +F +M+ + P +I F ++ L K A + +M G PN T
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 94 LINCHCYLGQTTSAFSVLANILKRG-YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ C G T AF + +++ Y P+ T+ ++I G C KL+RA + Q
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + TY TLING CK G A EL+ + G P + YN IDSLCK A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++L ++ + G+ + VTY+ LI C + QA+ M + D+ NIL+ A
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
++ K++E++ + +++ G+ P TY+S++ YC +++ A F+ M R G P+
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+Y +I GLCK MVDEA L E M + P +VT +L CK +NA LL+
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
+ + I T + + LC V +K+++K D T + G
Sbjct: 628 PLD---KKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 684
Query: 453 R 453
+
Sbjct: 685 K 685
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 176/331 (53%), Gaps = 3/331 (0%)
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
++ + ++ ++ A + +M +G++P+ +T + ++ +G ++ A + DEM ++
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
+ PD +Y ++V ++GK++EA L MI++G PD T + ++ C VN+A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
F M G PN+ ++ +I GLCK + +A +LEEM PN T+++LIDGL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 379 CKTGKVSNAWELLDEMHVRGQ--PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
CK G A+ L ++ VR ++ TY S + CK +++ L ++ ++G+ P
Sbjct: 333 CKRGWTEKAFRLFLKL-VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
++ TY L++G CK G A E+ + +G+ N +TYN I+ LCK+ EA L+
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Query: 497 SKMEDNGCIHDPITFETIISALFEKGENDKA 527
+K G D +T+ +I ++ + ++A
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 162/304 (53%), Gaps = 1/304 (0%)
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
++ F +G+L +A+G++ +M + + P +T N +++ + G + A+N+ M +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
V PD +Y ++ G ++ +A M +RG P+ + +++ LC+ +V+ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
+M PN + ++SLIDGLCK G + A+E+L+EM G ++ T+ + +D L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 414 CKGHHVDKGIALIKKIIDKGI-QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
CK +K L K++ +P++ TY ++ G CK ++ A+ +F + ++G N
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
TY T+ING CK G F A LM+ M D G + + T+ I +L +K +A +LL
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 533 EMIA 536
+ +
Sbjct: 453 KAFS 456
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 139/276 (50%), Gaps = 16/276 (5%)
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
Y + D+L G +++A ++ M++ + + +N+A + M
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCMLRN---------------FSEIGRLNEAVGMVMDMQ 174
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
+G+TP+ + N ++ ++ +++ A N+ +EM ++P+ +Y ++ G + GK+
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A L M RG D T L ALC+ V++ I +K+ID G +P++ + L+
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
DGLCK G IK A E+ +++ + G+ N +T+ +I+GLCK G ++A L K+ +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 506 HDPI-TFETIISALFEKGENDKAEKLLREMIARDLL 540
+ T+ ++I ++ + ++AE L M + L
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 249/505 (49%), Gaps = 1/505 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D+ S R P +I +N +LT L K A+ + +M+ PN T NIL
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNIL 383
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+ C G+ +AF + ++ K G P+ T N ++ LC KL A +++ +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
D++T+ +LI+GL K+G+ + A ++ ++ + ++Y ++I +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
+Y +MI + SP++ + + G+ ++ + +E+ + PD +Y+IL+ L
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
K G E + M +QG D Y+ ++DG+C +VNKA + M +G P V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+Y +I GL KI +DEA L EE ++I N V YSSLIDG K G++ A+ +L+E+
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
+G ++ T+NS LDAL K +++ + + + + P+ TY IL++GLCK +
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 514
A +Q++ K+G + +Y TMI+GL K G EA L + + NG + D + +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 515 ISALFEKGENDKAEKLLREMIARDL 539
I L A L E R L
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 234/471 (49%), Gaps = 1/471 (0%)
Query: 64 VKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDT 123
VK + + M P F LI + + ++ + + GY P
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 124 ITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR 183
F TLI+G G++ AL D++ + D V Y I+ K+G+ + A +
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
IE G+KP V Y ++I LCK + A +++ + P Y+ +I G+ G+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+A LL+ K P V+ YN ++ L K GKV EA + M K+ P++ TY+
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNI 382
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L+D C +++ A ++ ++M + G+ PNV++ NIM+ LCK + +DEA + EEMDY+
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
P+++T+ SLIDGL K G+V +A+++ ++M + I Y S + + G
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+ K +I++ PD+ N +D + K G + + +F+++ + + + +Y+ +I+GL
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
K G +E L M++ GC+ D + +I + G+ +KA +LL EM
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 233/470 (49%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + M + + P + N ++ L K++ A ++ +M+ TP+ +T
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ +G+ A+ V +L ++I + +LIK HG+ + + D++ Q
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D T ++ + K G+ E + I+ R P Y+ +I L K + +
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+L+ M +G + Y+ +I GFC G++ +A LL+EM K +P VVTY ++D L
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K ++ EA + + ++ +VV YSSL+DG+ V +++A + + ++G+TPN+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
++N ++ L K + ++EAL + M K PN+VTY LI+GLCK K + A+ E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M +G I+Y + + L K ++ + AL + G PD YN +++GL R
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
DA +F++ ++G ++N T +++ L K ++A + + + + G
Sbjct: 813 AMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 199/395 (50%), Gaps = 1/395 (0%)
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
Q ++ GF T ++ G K + ++++ + +P Y T+I +
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 204 CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDV 263
V L+ +M G P V ++ LI GF G++ A+ LLDEM ++D D+
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
V YN+ +D+ GK GKV A + G+KPD VTY+S++ C N +++A ++F
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
+ + P +YN MI G DEA +LLE + IP+ + Y+ ++ L K GK
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
V A ++ +EM P ++ TYN +D LC+ +D L + G+ P++ T NI
Sbjct: 359 VDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
++D LCK ++ +A +F+++ K + T+ ++I+GL K G D+A + KM D+
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 504 CIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
C + I + ++I F G + K+ ++MI ++
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 1/379 (0%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+Y +L+ + + +A ++L + G P+V ++ K + +D+ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
P Y+ LI F V + L +M +P V + L+ KEG+V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
A ++L M + D+V Y+ +D + V +V+ A F+ + G+ P+ +Y M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I LCK +DEA+ + E ++ + +P Y+++I G GK A+ LL+ +G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
+I YN L L K VD+ + + ++ + K P++ TYNIL+D LC+ G++ A E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+ + K G N T N M++ LCK DEA + +M+ C D ITF ++I L
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 520 EKGENDKAEKLLREMIARD 538
+ G D A K+ +M+ D
Sbjct: 459 KVGRVDDAYKVYEKMLDSD 477
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 38/231 (16%)
Query: 311 VNEVNKARDVFNAMARRGVTPNV-QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV 369
+ +VN+A + F RR P+ +SYN ++ + + + D +L EM P+
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 370 TYSSLIDGLCKTGKVSNAWELLDEMH-VRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
T ++ G K K+ ++++ M + +PA Y + + A +H D + L
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA-FSAYTTLIGAFSAVNHSDMMLTL--- 190
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
FQ + + GY + T+I G KEG
Sbjct: 191 --------------------------------FQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
D AL+L+ +M+ + D + + I + + G+ D A K E+ A L
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 263/524 (50%), Gaps = 35/524 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ V F++M + + P ++ FN V+ L Y A +M G+ P +T +I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTI----------------------------- 124
L+ + A+ VL + K+G+ P+ I
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 125 ------TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
T+NTLIKG C +G+ A + ++L+ GF ++Q ++ ++I LC ++AL
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+ + R + P + T+I LCK S A +L+ + + KG + T +AL++G
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+L +A + E++ + D V+YN L+ + K+ EA L M+K+G+KPD
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TYS L+ G +N+V +A ++ R G+ P+V +Y++MI G CK + +E +E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M + + PN V Y+ LI C++G++S A EL ++M +G + TY S + +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
V++ L +++ +G++P++ Y L+DG K G++ + + +++ K + N TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
MI G ++G EA L+++M + G + D IT++ I ++G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 239/484 (49%), Gaps = 1/484 (0%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P N +LTSLV+ + + + G++P+ IN C G+ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ + + G P+ +TFNT+I GL + G+ A F + ++ +G + +TY+ L+ GL +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
+ A +L+ + +G P V++YN +IDS + ++ A ++ M++KG+S T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+ LI G+C GQ A LL EM+ + + ++ ++ L A + M+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ + P ++L+ G C + +KA +++ +G + ++ N +++GLC+ +D
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA + +E+ + ++V+Y++LI G C K+ A+ LDEM RG D TY+ +
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
L + V++ I G+ PD+ TY++++DG CK R ++ QE F ++ K
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
N YN +I C+ G AL L M+ G + T+ ++I + ++A+ L
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 531 LREM 534
EM
Sbjct: 703 FEEM 706
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 218/441 (49%), Gaps = 6/441 (1%)
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
CYL F VLAN +G P T N L+ L + + + D V+ +G D
Sbjct: 207 CYLA--LDVFPVLAN---KGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDV 260
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ T IN CK G+ E A++L ++E G+ P VV +NT+ID L AF +
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ +G+ P ++TYS L+ G ++ A +L EM K P+V+ YN L+D+ + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+ +A + +M+ +G+ TY++L+ GYC + + A + M G N S+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I LC M D AL + EM + P ++LI GLCK GK S A EL + +G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
D T N+ L LC+ +D+ + K+I+ +G D +YN L+ G C ++ +A
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ K+G +N+TY+ +I GL +EA+ + NG + D T+ +I
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 519 FEKGENDKAEKLLREMIARDL 539
+ ++ ++ EM+++++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNV 641
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 218/459 (47%), Gaps = 35/459 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ D M + P +I +N ++ S ++ + AI + M G++ T N
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFN-------------------------- 127
LI +C GQ +A +L +L G++ + +F
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 128 ---------TLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
TLI GLC HGK +AL+ L +GF +D T L++GLC+ G+ + A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+ + I GRG V YNT+I C K + AF EM+ +G+ P+ TYS LI G
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
+ ++++AI D+ + PDV TY++++D K + E + M+ + V+P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
V Y+ L+ YC ++ A ++ M +G++PN +Y +I G+ I V+EA L EE
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M E + PN Y++LIDG K G++ LL EMH + + ITY + + +
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
V + L+ ++ +KGI PD TY + G K G + +A
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 183/359 (50%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D + F ML ++P +++ L K +S A+ L Q G + T N L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ C G+ AF + IL RG D +++NTLI G C KL A F D+++ +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D TY+ LI GL M + E A++ + G+ P V Y+ +ID CK + +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
+ EM++K + PN V Y+ LI +C G+L A+ L ++M K I P+ TY L+ +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
+V EAK + M +G++P+V Y++L+DGY + ++ K + M + V PN
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y +MI G + V EA LL EM + I+P+ +TY I G K G V A++ DE
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 164/309 (53%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N +L L + A + +++ G + V+ N LI+ C + AF L ++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
RG PD T++ LI GL K+ A+QF DD G D TY+ +I+G CK +TE
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
E + + ++P V+YN +I + C+ +S A +L +M KGISPN TY++LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
G I+ ++++A L +EM ++ ++P+V Y L+D GK G++ + + +L M + V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+ +TY+ ++ GY V +A + N M +G+ P+ +Y IYG K V EA
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
Query: 357 EEMDYEKII 365
+E +Y II
Sbjct: 809 DEENYAAII 817
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + F++ + + P + ++ ++ K + +M + PN V N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI +C G+ + A + ++ +G P++ T+ +LIKG+ + ++ A +++ +G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ + Y LI+G K+GQ LLR + + + P + Y +I + V+ A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 253
L +EM KGI P+ +TY IYG+ G + +A DE
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 263/524 (50%), Gaps = 35/524 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ V F++M + + P ++ FN V+ L Y A +M G+ P +T +I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTI----------------------------- 124
L+ + A+ VL + K+G+ P+ I
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 125 ------TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
T+NTLIKG C +G+ A + ++L+ GF ++Q ++ ++I LC ++AL
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+ + R + P + T+I LCK S A +L+ + + KG + T +AL++G
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C G+L +A + E++ + D V+YN L+ + K+ EA L M+K+G+KPD
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TYS L+ G +N+V +A ++ R G+ P+V +Y++MI G CK + +E +E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M + + PN V Y+ LI C++G++S A EL ++M +G + TY S + +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
V++ L +++ +G++P++ Y L+DG K G++ + + +++ K + N TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
MI G ++G EA L+++M + G + D IT++ I ++G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 239/484 (49%), Gaps = 1/484 (0%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P N +LTSLV+ + + + G++P+ IN C G+ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ + + G P+ +TFNT+I GL + G+ A F + ++ +G + +TY+ L+ GL +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
+ A +L+ + +G P V++YN +IDS + ++ A ++ M++KG+S T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+ LI G+C GQ A LL EM+ + + ++ ++ L A + M+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ + P ++L+ G C + +KA +++ +G + ++ N +++GLC+ +D
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA + +E+ + ++V+Y++LI G C K+ A+ LDEM RG D TY+ +
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
L + V++ I G+ PD+ TY++++DG CK R ++ QE F ++ K
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
N YN +I C+ G AL L M+ G + T+ ++I + ++A+ L
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 531 LREM 534
EM
Sbjct: 703 FEEM 706
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 218/441 (49%), Gaps = 6/441 (1%)
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
CYL F VLAN +G P T N L+ L + + + D V+ +G D
Sbjct: 207 CYLA--LDVFPVLAN---KGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDV 260
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ T IN CK G+ E A++L ++E G+ P VV +NT+ID L AF +
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ +G+ P ++TYS L+ G ++ A +L EM K P+V+ YN L+D+ + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+ +A + +M+ +G+ TY++L+ GYC + + A + M G N S+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I LC M D AL + EM + P ++LI GLCK GK S A EL + +G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
D T N+ L LC+ +D+ + K+I+ +G D +YN L+ G C ++ +A
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ K+G +N+TY+ +I GL +EA+ + NG + D T+ +I
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 519 FEKGENDKAEKLLREMIARDL 539
+ ++ ++ EM+++++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNV 641
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 218/459 (47%), Gaps = 35/459 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ D M + P +I +N ++ S ++ + AI + M G++ T N
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFN-------------------------- 127
LI +C GQ +A +L +L G++ + +F
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 128 ---------TLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
TLI GLC HGK +AL+ L +GF +D T L++GLC+ G+ + A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+ + I GRG V YNT+I C K + AF EM+ +G+ P+ TYS LI G
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
+ ++++AI D+ + PDV TY++++D K + E + M+ + V+P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
V Y+ L+ YC ++ A ++ M +G++PN +Y +I G+ I V+EA L EE
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M E + PN Y++LIDG K G++ LL EMH + + ITY + + +
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
V + L+ ++ +KGI PD TY + G K G + +A
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 183/359 (50%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D + F ML ++P +++ L K +S A+ L Q G + T N L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ C G+ AF + IL RG D +++NTLI G C KL A F D+++ +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D TY+ LI GL M + E A++ + G+ P V Y+ +ID CK + +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
+ EM++K + PN V Y+ LI +C G+L A+ L ++M K I P+ TY L+ +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
+V EAK + M +G++P+V Y++L+DGY + ++ K + M + V PN
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y +MI G + V EA LL EM + I+P+ +TY I G K G V A++ DE
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 164/309 (53%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N +L L + A + +++ G + V+ N LI+ C + AF L ++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
RG PD T++ LI GL K+ A+QF DD G D TY+ +I+G CK +TE
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
E + + ++P V+YN +I + C+ +S A +L +M KGISPN TY++LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
G I+ ++++A L +EM ++ ++P+V Y L+D GK G++ + + +L M + V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+ +TY+ ++ GY V +A + N M +G+ P+ +Y IYG K V EA
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
Query: 357 EEMDYEKII 365
+E +Y II
Sbjct: 809 DEENYAAII 817
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + F++ + + P + ++ ++ K + +M + PN V N
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI +C G+ + A + ++ +G P++ T+ +LIKG+ + ++ A +++ +G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ + Y LI+G K+GQ LLR + + + P + Y +I + V+ A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 253
L +EM KGI P+ +TY IYG+ G + +A DE
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 272/542 (50%), Gaps = 39/542 (7%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V + FNRM RI P + +N ++ L K K + A L +M + P+ +T N
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHG--------------- 137
LI+ +C G +F V + P ITFNTL+KGL G
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 138 --------------------KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
K AL ++ + G +++ T + L+N LCK G+ E A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
E+L R +G+ P V+YNT+ID C+ + A M +G+ P+ + Y+ LI
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
FC +G+++ A +++M LK + P V TYNIL+ G++ + + ++L M G P+
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
VV+Y +L++ C +++ +A+ V M RGV+P V+ YN++I G C +++A +
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
EM + I N VTY++LIDGL TGK+S A +LL E+ +G D+ TYNS +
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+V + IAL +++ GI+P + TY++L+ LC I+ + +F ++ K + YN
Sbjct: 614 NVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKP---DLLVYN 669
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
+++ G ++A L +M + D T+ ++I + G+ + L+ EM AR
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 538 DL 539
++
Sbjct: 730 EM 731
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 269/538 (50%), Gaps = 31/538 (5%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D F+ ML R+ P +I +N ++ K + + + +M+ I P+ +T N
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ G A +VL + G+ PD TF+ L G + K AL ++ + G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+++ T + L+N LCK G+ E A E+L R +G+ P V+YNT+ID C+ + A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
M +G+ P+ + Y+ LI FC +G+++ A +++M LK + P V TYNIL+
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
G++ + + ++L M G P+VV+Y +L++ C +++ +A+ V M RGV+P V
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+ YN++I G C +++A +EM + I N VTY++LIDGL TGK+S A +LL E
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL-------- 445
+ +G D+ TYNS + +V + IAL +++ GI+P + TY++L+
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 446 -------------------DGLCKC----GRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
+G+ C G ++ A + + + +K L+ TYN++I G
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
K G E +L+ +M + T+ I+ E + A REM + L
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 256/505 (50%), Gaps = 2/505 (0%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
T++ F +L+ P + K + + VK + L +M+ I P+ N+LI+
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
C + A + +L R P IT+NTLI G C G ++ + + + A +
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
+T+ TL+ GL K G E A +L+ ++ G P ++ + D + A +Y
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+ G+ N T S L+ C G++++A +L + K + P+ V YN ++D ++
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
G + A+ + M KQG+KPD + Y+ L+ +C + E+ A N M +GV+P+V++Y
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
NI+I G + D+ ++L+EM+ +PN V+Y +LI+ LCK K+ A + +M
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
RG + YN +D C ++ K+++ KGI+ ++ TYN L+DGL G++ +
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
A+++ ++ +KG + +TYN++I+G G + L +M+ +G T+ +IS
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 517 ALFEKGENDKAEKLLREM-IARDLL 540
++G + E+L EM + DLL
Sbjct: 643 LCTKEG-IELTERLFGEMSLKPDLL 666
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 244/504 (48%), Gaps = 4/504 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+D + M + P F+ + + A+ + +G+ N T +I
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+N C G+ A +L + +G P+ + +NT+I G C G L A + + QG
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D + Y LI C++G+ E A + + +++ +G+ P+V YN +I + F
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
D+ EM G PNVV+Y LI C +L +A + +M + + P V YN+L+D
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+GK+ +A M+K+G++ ++VTY++L+DG + ++++A D+ ++R+G+ P+V
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+YN +I G V + L EEM I P TY LI LC + L E
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGE 658
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M ++ D++ YN L ++K L K++I+K I D TYN L+ G K G+
Sbjct: 659 MSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
+ + + + ++ + TYN ++ G C+ + A +M++ G + D
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775
Query: 514 IISALFEKGENDKAEKLLREMIAR 537
++S L E+ + +AE ++ EM R
Sbjct: 776 LVSGLKEEWRSKEAEIVISEMNGR 799
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 238/488 (48%), Gaps = 38/488 (7%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
+++ L++L+N + + F L N G +P + + L+ L + +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRN---EGIYPSSDSLTLLLDHLVKTKQFRVTINVF 167
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
++L F+ + Y I K+ LEL R++ I P+V +YN +ID LCK
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
K ++ A L+ EM+A+ + P+++TY+ LI G+C G +++ + + M +I+P ++T+
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY------------------ 308
N L+ L K G V +A+N+L M G PD T+S L DGY
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 309 -----------------CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
C ++ KA ++ +G+ PN YN MI G C+ +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A +E M+ + + P+ + Y+ LI C+ G++ NA + +++M ++G + TYN +
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
+ + DK ++K++ D G P++ +Y L++ LCK ++ +AQ V +D+ +G +
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
YN +I+G C +G ++A +M G + +T+ T+I L G+ +AE LL
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 532 REMIARDL 539
E+ + L
Sbjct: 588 LEISRKGL 595
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 142/276 (51%)
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+Y +L L + + EA ++ + +G+ P + + L+D + +VF +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
P+ Y I K+ V + L L M +++I P+ Y+ LIDGLCK ++
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
++A +L DEM R +ITYN+ +D CK + +K + +++ I+P + T+N L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
L GL K G ++DA+ V +++ G+ + +T++ + +G + AL + D+G
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ T +++AL ++G+ +KAE++L +A+ L+
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 253/478 (52%), Gaps = 1/478 (0%)
Query: 58 KVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKR 117
+V++ + ++ ++++ L E F ++IN + + S ++
Sbjct: 64 QVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDN 123
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G+ P + FN L+ + ++ F ++ ++ LD ++ LI G C+ G+ E +
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKS 182
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
+LL + G P VV+Y T+ID CK + A DL+ EM G+ N TY+ LI G
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
G KQ + ++M + P++ TYN +++ L K+G+ ++A + M ++GV +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
+VTY++L+ G C ++N+A V + M G+ PN+ +YN +I G C + + +AL+L
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
++ + P+ VTY+ L+ G C+ G S A +++ EM RG +TY +D +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+++K I L + + G+ PD+ TY++L+ G C G++ +A +F+ + +K N YN
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
TMI G CKEG AL L+ +ME+ + ++ +I L ++ ++ +AE+L+ +MI
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 242/468 (51%), Gaps = 8/468 (1%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTT-SAFSVLANILKR 117
++ S V+++ + +IS +M G P N L+ +G ++ + + N K
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF--VVGSSSFNQWWSFFNENKS 157
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
D +F LIKG C G++ ++ ++ GF + V Y TLI+G CK G+ E A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
+L + G+ Y +I+ L K + F++Y +M G+ PN+ TY+ ++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
C G+ K A + DEM + + ++VTYN L+ L +E K+ EA ++ M G+ P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
++TY++L+DG+C V ++ KA + + RG++P++ +YNI++ G C+ A +++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
EM+ I P+KVTY+ LID ++ + A +L M G D+ TY+ + C
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+++ L K +++K +P+ YN ++ G CK G A ++ +++ +K N +Y
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 525
MI LCKE EA L+ KM D+G DP T I +L + +ND
Sbjct: 518 YMIEVLCKERKSKEAERLVEKMIDSGI--DP---STSILSLISRAKND 560
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 225/436 (51%), Gaps = 36/436 (8%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
++S+FN M+ P FN +LT +V + ++ S + + + + + + ILI
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIK 171
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ------------ 144
C G+ +F +L + + G+ P+ + + TLI G C G++ +A
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 145 ------------FHDDVLAQGFQLDQ-----------VTYATLINGLCKMGQTEAALELL 181
F + V QGF++ + TY ++N LCK G+T+ A ++
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
+ RG+ +V YNT+I LC+ ++ A + +M + GI+PN++TY+ LI GFC V
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
G+L +A+ L ++ + + P +VTYNILV ++G A M+ M ++G+KP VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+ L+D + + + KA + +M G+ P+V +Y+++I+G C ++EA L + M
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+ PN+V Y+++I G CK G A +LL EM + ++ +Y ++ LCK +
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 422 GIALIKKIIDKGIQPD 437
L++K+ID GI P
Sbjct: 532 AERLVEKMIDSGIDPS 547
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 187/361 (51%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++ + + + +P ++ + ++ K A L +M G+ N T +
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN G F + + + G P+ T+N ++ LC G+ A Q D++ +G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ VTY TLI GLC+ + A +++ +++ GI P ++ YNT+ID C V + A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L ++ ++G+SP++VTY+ L+ GFC G A ++ EM + I P VTY IL+D
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+ + +A + M + G+ PDV TYS L+ G+C+ ++N+A +F +M + PN
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
YN MI G CK AL LL+EM+ +++ PN +Y +I+ LCK K A L+++
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 394 M 394
M
Sbjct: 539 M 539
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 195/378 (51%), Gaps = 1/378 (0%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y +IN + ++ + G P +N ++ + + + ++E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+K + +V ++ LI G C G+++++ LL E+ P+VV Y L+D K+G++
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+AK++ M K G+ + TY+ L++G + +++ M GV PN+ +YN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
LCK +A + +EM + N VTY++LI GLC+ K++ A +++D+M G
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
++ITYN+ +D C + K ++L + + +G+ P + TYNIL+ G C+ G A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
+++ ++G + TY +I+ + ++A+ L ME+ G + D T+ +I
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 521 KGENDKAEKLLREMIARD 538
KG+ ++A +L + M+ ++
Sbjct: 456 KGQMNEASRLFKSMVEKN 473
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 134/263 (50%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D F+ M + ++ I+ +N ++ L + + A + QM+ GI PN +T N LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ C +G+ A S+ ++ RG P +T+N L+ G C G A + ++ +G +
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+VTY LI+ + E A++L +E G+ P V Y+ +I C ++ A L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ M+ K PN V Y+ +I G+C G +A+ LL EM K + P+V +Y +++ L K
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 276 EGKVREAKNMLAVMIKQGVKPDV 298
E K +EA+ ++ MI G+ P
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPST 548
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 150/309 (48%), Gaps = 1/309 (0%)
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y +I + L +I +EMV P +N L+ + + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K V DV ++ L+ G C E+ K+ D+ + G +PNV Y +I G CK ++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
+A +L EM ++ N+ TY+ LI+GL K G +E+ ++M G ++ TYN +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
+ LCK + ++ ++G+ ++ TYN L+ GLC+ ++ +A +V + G N
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
N TYNT+I+G C G +AL+L ++ G +T+ ++S KG+ A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 531 LREMIARDL 539
++EM R +
Sbjct: 396 VKEMEERGI 404
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 257/537 (47%), Gaps = 43/537 (8%)
Query: 41 FNRMLQMR-ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
F+R++ R I+ NKVL L A L + G PN VT LIN C
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G+ AF + + +RG PD I ++TLI G G L + L +G +LD V
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+++ I+ K G A + +R+ +GI P VV Y +I LC+ + AF +Y ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ +G+ P++VTYS+LI GFC G L+ L ++M+ PDVV Y +LVD L K+G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY--- 336
A M+ Q ++ +VV ++SL+DG+C +N ++A VF M G+ P+V ++
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 337 --------------------------------------NIMIYGLCKIKMVDEALNLLEE 358
N++I+ L K +++A
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
+ K+ P+ VTY+++I G C ++ A + + + V + +T + LCK +
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
+D I + + +KG +P+ TY L+D K I+ + ++F+++ +KG + + +Y+
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+I+GLCK G DEA + + D + D + + +I + G +A L M+
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 228/436 (52%), Gaps = 10/436 (2%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F++ L + ++ F+ + VK+ +TA + ++M GI+PN VT ILI C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ AF + ILKRG P +T+++LI G C G L ++D++ G+ D V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y L++GL K G A+ ++ G+ I+ VV++N++ID C++ A ++ M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 221 AKGISPNVVTYSALIY------GFCIVGQLKQAIGL--LDEMVLKNIDPDVVTYNILVDA 272
GI P+V T++ ++ FC +K IGL D M I D+ N+++
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFC--KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K ++ +A +I+ ++PD+VTY++++ GYC + +++A +F + PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ I+I+ LCK +D A+ + M + PN VTY L+D K+ + +++L +
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM +G I++Y+ +D LCK VD+ + + ID + PD+ Y IL+ G CK G
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 453 RIKDAQEVFQDLFKKG 468
R+ +A +++ + + G
Sbjct: 762 RLVEAALLYEHMLRNG 777
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 256/512 (50%), Gaps = 10/512 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN- 92
VD + F Q+ + P ++L SL+ + ++ GI P+ V+ +
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 93 -ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
+L C G+ T A +++RG+ ++ N ++KGL + ++ A + VL
Sbjct: 222 FVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLD 279
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G + VT+ TLING CK G+ + A +L + +E RGI+P ++ Y+T+ID K ++
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
L+S+ + KG+ +VV +S+ I + G L A + M+ + I P+VVTY IL+
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
L ++G++ EA M ++K+G++P +VTYSSL+DG+C + ++ M + G P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+V Y +++ GL K ++ A+ +M + I N V ++SLIDG C+ + A ++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 392 DEMHVRGQPADIITYNSFL------DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
M + G D+ T+ + + DA CK G+ L + I D+ N+++
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
L KC RI+DA + F +L + + TYNTMI G C DEA + ++
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMIAR 537
+ +T +I L + + D A ++ M +
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 205/406 (50%), Gaps = 42/406 (10%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
+ RML I+P ++ + ++ L + A + Q+ G+ P+ VT + LI+ C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G S F++ +++K GY PD + + L+ GL G + A++F +L Q +L+ V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTII------DSLCK--------- 205
+ +LI+G C++ + + AL++ R + GIKP V + T++ D+ CK
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 206 ----------------VKLVSH----------AFDLYSEMIAKGISPNVVTYSALIYGFC 239
+V H A ++ +I + P++VTY+ +I G+C
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
+ +L +A + + + + P+ VT IL+ L K + A M ++M ++G KP+ V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
TY LMD + ++ + +F M +G++P++ SY+I+I GLCK VDEA N+ +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG-QPADII 404
K++P+ V Y+ LI G CK G++ A L + M G +P D++
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 784
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 8/349 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ + + M++M P ++ + ++ L K A+ S +M I N V N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK------GLCLHGKLHRALQFH 146
LI+ C L + A V + G PD TF T+++ C H K LQ
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLF 560
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR-IEGRGIKPTVVMYNTIIDSLCK 205
D + D +I+ L K + E A + IEG+ ++P +V YNT+I C
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNTMICGYCS 619
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
++ + A ++ + PN VT + LI+ C + AI + M K P+ VT
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
Y L+D K + + + M ++G+ P +V+YS ++DG C V++A ++F+
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
+ P+V +Y I+I G CK+ + EA L E M + P+ + +L
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 269/531 (50%), Gaps = 33/531 (6%)
Query: 34 VDDTVSF-FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
V D VS +++M+ ++P + N ++ S K S AISL R I+ T VT N
Sbjct: 109 VHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDT---VTYN 165
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHD----- 147
+I+ C G A+ L+ ++K G PDT+++NTLI G C G RA D
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL 225
Query: 148 -----------------------DVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
D++ GF D VT++++IN LCK G+ LLR +
Sbjct: 226 NLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM 285
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
E + P V Y T++DSL K + HA LYS+M+ +GI ++V Y+ L+ G G L
Sbjct: 286 EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDL 345
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
++A ++ N P+VVTY LVD L K G + A+ ++ M+++ V P+VVTYSS+
Sbjct: 346 REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSM 405
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
++GY + +A + M + V PN +Y +I GL K + A+ L +EM +
Sbjct: 406 INGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 465
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
N +L++ L + G++ L+ +M +G D I Y S +D KG + +A
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
+++ ++G+ D+ +YN+L+ G+ K G++ A ++ + +KG + T+N M+N
Sbjct: 526 WAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQR 584
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
K+G + L L KM+ G ++ ++ L E G+ ++A +L +M+
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 253/568 (44%), Gaps = 71/568 (12%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
M +M + P + + ++ SL K Y A++L QM + GI + V +L++
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G A +L+ P+ +T+ L+ GLC G L A +L + + V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY+++ING K G E A+ LLR++E + + P Y T+ID L K A +L EM
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
G+ N AL+ +G++K+ GL+ +MV K + D + Y L+D K G
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
A M ++G+ DVV+Y+ L+ G +V A + M +G+ P++ ++NIM
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 579
Query: 340 IYG-----------------------------------LCKIKMVDEALNLLEEMDYEKI 364
+ LC+ ++EA+++L +M +I
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 365 IPNKVT-----------------------------------YSSLIDGLCKTGKVSNAWE 389
PN T Y++LI LCK G A
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
++ +M RG D +T+NS + G HV K ++ +++ GI P++ TYN ++ GL
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 509
G IK+ + ++ +G +++TYN +I+G K G ++T+ +M +G +
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 510 TFETIISALFEKGENDKAEKLLREMIAR 537
T+ +IS G+ +A +LL+EM R
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKR 847
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 249/513 (48%), Gaps = 14/513 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ VS +M + P + V+ L K AI LS++M + G+ N L+
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+N +G+ ++ +++ +G D I + +LI G AL + +++ +G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D V+Y LI+G+ K G+ A + + +GI+P + +N +++S K
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ +M + GI P++++ + ++ C G++++AI +L++M+L I P++ TY I +D
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K + ++ G+K Y++L+ C + KA V M RG P+
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
++N +++G V +AL+ M I PN TY+++I GL G + + L E
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M RG D TYN+ + K ++ + + ++I G+ P TYN+L+ G+
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLC-----------KEGLF-DEALTLMSKM-E 500
+ A+E+ +++ K+G + N TY TMI+GLC K+ ++ EA L+ +M E
Sbjct: 834 MLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVE 893
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
+ G I T I +A + G AE+ L+E
Sbjct: 894 EKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 171/391 (43%), Gaps = 102/391 (26%)
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML-AVMIKQGVKPDVVTY 301
+L A L M + PD +N L+ G V + +++ + MI GV PDV
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+ L+ +C V ++ A + + R ++ + +YN +I GLC+ + DEA L EM
Sbjct: 133 NVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE---------------------------- 393
I+P+ V+Y++LIDG CK G A L+DE
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD 249
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKG------------------------------- 422
M + G D++T++S ++ LCKG V +G
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309
Query: 423 ----IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ---------------- 462
+AL +++ +GI D+ Y +L+DGL K G +++A++ F+
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 463 -------------------DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
+ +K N TY++MING K+G+ +EA++L+ KMED
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429
Query: 504 CIHDPITFETIISALFEKGENDKAEKLLREM 534
+ + T+ T+I LF+ G+ + A +L +EM
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 252/502 (50%), Gaps = 9/502 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F +M++ P + N VL L ++ + A ++ M GI P +T N +++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G + + +R +T+N LI G +GK+ A +FH D+ GF + +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ LI G CK G + A + + GI PT YN I +LC + A +L S M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
A P+VV+Y+ L++G+ +G+ +A L D++ +I P +VTYN L+D L + G +
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A+ + M Q + PDV+TY++L+ G+ ++ A +V++ M R+G+ P+ +Y
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 341 YGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
G ++ D+A L EEM + P+ Y+ IDGLCK G + A E ++ G
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
D +TY + + + L +++ K + P + TY +L+ G K GR++ A +
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL- 518
++ K+G N T+N ++ G+CK G DEA + KME+ G + ++ +IS
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 519 -FEKGENDKAEKLLREMIARDL 539
FEK E + KL +EM+ +++
Sbjct: 667 DFEKWE--EVVKLYKEMLDKEI 686
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 204/403 (50%), Gaps = 7/403 (1%)
Query: 49 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAF 108
+TP FN ++ K + A ++ +M GI P T NI I C G+ A
Sbjct: 306 VTP--YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
+L+++ PD +++NTL+ G GK A DD+ A VTY TLI+GL
Sbjct: 364 ELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNV 228
C+ G E A L + + I P V+ Y T++ K +S A ++Y EM+ KGI P+
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLKNID-PDVVTYNILVDALGKEGKVREAKNMLA 287
Y+ G +G +A L +EMV + PD+ YN+ +D L K G + +A
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
+ + G+ PD VTY++++ GY + AR++++ M R+ + P+V +Y ++IYG K
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
+++A EM + PN +T+++L+ G+CK G + A+ L +M G P + +Y
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
+ C ++ + L K+++DK I+PD T+ L L K
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 189/385 (49%), Gaps = 7/385 (1%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
DD + ML I P +N + +L I +R++ + P+ V+ N L
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR----IDDARELLSSMAAPDVVSYNTL 380
Query: 95 INCHCYLGQTTSAFSVLANILKRG-YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++ + +G+ A S+L + L+ G HP +T+NTLI GLC G L A + +++ Q
Sbjct: 381 MHGYIKMGKFVEA-SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D +TY TL+ G K G A E+ + +GIKP Y T ++ AF
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 214 DLYSEMIAKGI-SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L+ EM+A +P++ Y+ I G C VG L +AI ++ + PD VTY ++
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ G+ + A+N+ M+++ + P V+TY L+ G+ + +A M +RGV PN
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V ++N ++YG+CK +DEA L +M+ E I PNK +Y+ LI C K +L
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 393 EMHVRGQPADIITYNSFLDALCKGH 417
EM + D T+ + L K H
Sbjct: 680 EMLDKEIEPDGYTHRALFKHLEKDH 704
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 186/406 (45%), Gaps = 40/406 (9%)
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K E L ++ +G P+V N ++ L ++++ A +Y MI GI P V+
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
T++ ++ G L++ + EM +NI+ VTYNIL++ K GK+ EA+ M
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ G +++ L++GYC + A V + M G+ P +YNI I LC +
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
D+A LL M P+ V+Y++L+ G K GK A L D++ I+TYN+
Sbjct: 360 DDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+D LC+ +++ L +++ + I PD+ TY L+ G K G + A EV+ ++ +KG
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 470 NLNNWT------------------------------------YNTMINGLCKEGLFDEAL 493
+ + YN I+GLCK G +A+
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 494 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
K+ G + D +T+ T+I E G+ A L EM+ + L
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 1/252 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGI-TPNFVTL 91
N+ ++ ML+ I P + ++ A L +M T P+
Sbjct: 459 NLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIY 518
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
N+ I+ C +G A I + G PD +T+ T+I+G +G+ A +D++L
Sbjct: 519 NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+ +TY LI G K G+ E A + ++ RG++P V+ +N ++ +CK +
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A+ +M +GI PN +Y+ LI C + ++ + L EM+ K I+PD T+ L
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
Query: 272 ALGKEGKVREAK 283
L K+ + RE +
Sbjct: 699 HLEKDHESREVE 710
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 35/220 (15%)
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
F M R+G P+V++ NI++ L +M+++A + E M I+P
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT------------- 237
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCT 440
+IT+N+ LD+ K +++ + ++ + I+ T
Sbjct: 238 ----------------------VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT 275
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
YNIL++G K G++++A+ D+ + G+ + +++N +I G CK+GLFD+A + +M
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ G T+ I AL + G D A +LL M A D++
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV 375
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 256/498 (51%), Gaps = 3/498 (0%)
Query: 39 SFFNRMLQMRITPPIIE-FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
S M + ++ P E + V+ + VK + AI L +M GI+ N V LI
Sbjct: 289 SLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITG 348
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
HC SA + + K G P+++TF+ LI+ +G++ +AL+F+ + G
Sbjct: 349 HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS 408
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
T+I G K + E AL+L G+ V + NTI+ LCK A +L S
Sbjct: 409 VFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLS 467
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
+M ++GI PNVV+Y+ ++ G C + A + ++ K + P+ TY+IL+D +
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF-NAMARRGVTPNVQSY 336
+ A ++ M ++ + V Y ++++G C V + +KAR++ N + + + + SY
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
N +I G K +D A+ EEM I PN +TY+SL++GLCK ++ A E+ DEM
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
+G DI Y + +D CK +++ AL +++++G+ P YN L+ G G +
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
A ++++ + K G + TY T+I+GL K+G A L ++M+ G + D I + I++
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 517 ALFEKGENDKAEKLLREM 534
L +KG+ K K+ EM
Sbjct: 768 GLSKKGQFVKVVKMFEEM 785
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 264/510 (51%), Gaps = 4/510 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+DD + + ML I+ ++ ++T K +A+ L +ME G +PN VT +
Sbjct: 319 NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI G+ A + G P +T+I+G K AL+ D+
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 438
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + T+++ LCK G+T+ A ELL ++E RGI P VV YN ++ C+ K + A
Sbjct: 439 GLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ-AIGLLDEMVLKNIDPDVVTYNILVD 271
++S ++ KG+ PN TYS LI G C +Q A+ +++ M NI+ + V Y +++
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDG-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 272 ALGKEGKVREAKNMLAVMIKQG-VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
L K G+ +A+ +LA MI++ + ++Y+S++DG+ E++ A + M G++
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
PNV +Y ++ GLCK +D+AL + +EM + + + Y +LIDG CK + +A L
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
E+ G YNS + ++ + L KK++ G++ D+ TY L+DGL K
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
G + A E++ ++ G + Y ++NGL K+G F + + + +M+ N + +
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 511 FETIISALFEKGENDKAEKLLREMIARDLL 540
+ +I+ + +G D+A +L EM+ + +L
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 156/578 (26%), Positives = 272/578 (47%), Gaps = 73/578 (12%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D V N+ML++ + P N+ L++LV+ + A L +M G+ + VT +L
Sbjct: 180 DHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLL 239
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITF----------------NTLI-----KGL 133
+ + A VL+ ++RG PD++ + N+L+ K L
Sbjct: 240 MRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKL 299
Query: 134 CL---------------HGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
C+ G + A++ D++L+ G ++ V +LI G CK +AL
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
L ++E G P V ++ +I+ K + A + Y +M G++P+V +I G+
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
+ ++A+ L DE + +V N ++ L K+GK EA +L+ M +G+ P+V
Sbjct: 420 LKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
V+Y+++M G+C ++ AR VF+ + +G+ PN +Y+I+I G + AL ++
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL--------------------------- 391
M I N V Y ++I+GLCK G+ S A ELL
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 392 ---------DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
+EM G ++ITY S ++ LCK + +D+ + + ++ +KG++ D+ Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 502
L+DG CK ++ A +F +L ++G N + YN++I+G G AL L KM +
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
G D T+ T+I L + G A +L EM A L+
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 210/392 (53%), Gaps = 1/392 (0%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N +L+ L K A L +ME GI PN V+ N ++ HC A V +NIL+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
+G P+ T++ LI G + AL+ + + + +++ V Y T+INGLCK+GQT
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 177 ALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A ELL IE + + + + YN+IID K + A Y EM GISPNV+TY++L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G C ++ QA+ + DEM K + D+ Y L+D K + A + + ++++G+
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
P Y+SL+ G+ + + A D++ M + G+ ++ +Y +I GL K + A L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
EM ++P+++ Y+ +++GL K G+ ++ +EM +++ YN+ + +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
++D+ L +++DKGI PD T++IL+ G
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 240/485 (49%), Gaps = 37/485 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++ + F+ +M + +TP + + ++ +K + + A+ L + TG+ FV N
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NT 448
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+++ C G+T A +L+ + RG P+ +++N ++ G C + A ++L +G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ + TY+ LI+G + + ALE++ + I+ V+Y TII+ LCKV S A
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 214 DLYSEMIA-KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L + MI K + + ++Y+++I GF G++ A+ +EM I P+V+TY L++
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K ++ +A M M +GVK D+ Y +L+DG+C + + A +F+ + G+ P+
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
YN +I G + + AL+L ++M + + + TY++LIDGL K G + A EL
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM G + PD Y ++++GL K G
Sbjct: 749 EMQAVG-----------------------------------LVPDEIIYTVIVNGLSKKG 773
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+ ++F+++ K N YN +I G +EG DEA L +M D G + D TF+
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 513 TIISA 517
++S
Sbjct: 834 ILVSG 838
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 222/455 (48%), Gaps = 5/455 (1%)
Query: 83 GITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA 142
G N N L+N + QT A ++ +L+ P N + L L A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 143 LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS 202
+ + ++A G D VT L+ + + ALE+L R RG +P ++Y+ + +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 203 LCKVKLVSHAFDLYSEMIAKGIS-PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP 261
CK ++ A L EM K + P+ TY+++I G + AI L DEM+ I
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
+VV L+ K + A + M K+G P+ VT+S L++ + E+ KA + +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
M G+TP+V + +I G K + +EAL L +E +E + N ++++ LCK
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQ 456
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
GK A ELL +M RG ++++YN+ + C+ ++D + I++KG++P+ TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-- 499
+IL+DG + ++A EV + +N Y T+INGLCK G +A L++ M
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
E C+ +++ +II F++GE D A EM
Sbjct: 577 EKRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 182/346 (52%), Gaps = 1/346 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+D F+ +L+ + P ++ ++ + A+ + M + I N V
Sbjct: 493 NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552
Query: 93 ILINCHCYLGQTTSAFSVLANILK-RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
+IN C +GQT+ A +LAN+++ + +++N++I G G++ A+ ++++
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG 612
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G + +TY +L+NGLCK + + ALE+ ++ +G+K + Y +ID CK +
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A L+SE++ +G++P+ Y++LI GF +G + A+ L +M+ + D+ TY L+D
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
L K+G + A + M G+ PD + Y+ +++G + K +F M + VTP
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
NV YN +I G + +DEA L +EM + I+P+ T+ L+ G
Sbjct: 793 NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 204/430 (47%), Gaps = 37/430 (8%)
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
D + GF+++ + L+N K QT+ A++++ ++ + P N + +L +
Sbjct: 152 DSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQR 211
Query: 207 KLVSHAFDLYSEMIA-----------------------------------KGISPNVVTY 231
++ A +LYS M+A +G P+ + Y
Sbjct: 212 NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNI-DPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
S + C L A LL EM K + P TY ++ A K+G + +A + M+
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
G+ +VV +SL+ G+C N++ A +F+ M + G +PN +++++I K ++
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
+AL ++M+ + P+ ++I G K K A +L DE G A++ N+ L
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTIL 450
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
LCK D+ L+ K+ +GI P++ +YN ++ G C+ + A+ VF ++ +KG
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
NN+TY+ +I+G + AL +++ M + + + ++TII+ L + G+ KA +L
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 531 LREMIARDLL 540
L MI L
Sbjct: 571 LANMIEEKRL 580
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 235/451 (52%), Gaps = 4/451 (0%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
LN++IN Y V+ + + P+ ++FN +IK LC + RA++ +
Sbjct: 155 LNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP 214
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
+ D TY TL++GLCK + + A+ LL ++ G P+ V+YN +ID LCK ++
Sbjct: 215 ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLT 274
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
L M KG PN VTY+ LI+G C+ G+L +A+ LL+ MV P+ VTY L+
Sbjct: 275 RVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLI 334
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
+ L K+ + +A +L+ M ++G + YS L+ G + +A ++ MA +G
Sbjct: 335 NGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 394
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
PN+ Y++++ GLC+ +EA +L M +PN TYSSL+ G KTG A ++
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
EM G + Y+ +D LC V + + + K++ GI+PD Y+ ++ GLC
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514
Query: 451 CGRIKDAQEVFQDLF---KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
G + A +++ ++ + + TYN +++GLC + A+ L++ M D GC D
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Query: 508 PITFETIISALFEKGEN-DKAEKLLREMIAR 537
IT T ++ L EK + DK L E++ R
Sbjct: 575 VITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 228/458 (49%), Gaps = 10/458 (2%)
Query: 35 DDTVSFFNRML-QMRITPPIIEFNKVLTSLVKTKHYSTAIS-----LSRQMEITGITPNF 88
D V F+RM+ + R + FN VL ++ Y + ++ M + I+PN
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNG 187
Query: 89 VTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDD 148
++ N++I C L A V + +R PD T+ TL+ GLC ++ A+ D+
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 149 VLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
+ ++G V Y LI+GLCK G +L+ + +G P V YNT+I LC
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
+ A L M++ PN VTY LI G + A+ LL M + + Y++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
L+ L KEGK EA ++ M ++G KP++V YS L+DG C + N+A+++ N M G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
PN +Y+ ++ G K + +EA+ + +EMD NK YS LIDGLC G+V A
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII---DKGIQPDMCTYNILL 445
+ +M G D + Y+S + LC +D + L +++ + QPD+ TYNILL
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
DGLC I A ++ + +G + + T NT +N L
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 211/401 (52%), Gaps = 4/401 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD + F M + + P + ++ L K + A+ L +M+ G +P+ V N+
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ C G T ++ N+ +G P+ +T+NTLI GLCL GKL +A+ + +++
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ VTY TLINGL K + A+ LL +E RG +Y+ +I L K A
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ +M KG PN+V YS L+ G C G+ +A +L+ M+ P+ TY+ L+
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K G EA + M K G + YS L+DG C V V +A V++ M G+ P+
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEM---DYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+Y+ +I GLC I +D AL L EM + K P+ VTY+ L+DGLC +S A +L
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 391 LDEMHVRGQPADIITYNSFLDALC-KGHHVDKGIALIKKII 430
L+ M RG D+IT N+FL+ L K + DKG + +++++
Sbjct: 563 LNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 219/420 (52%), Gaps = 7/420 (1%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD----QVTYATLINGLCKMGQTEAALEL 180
+FN+++ + G HR L+F+D V+ ++ +++ +I LCK+ + A+E+
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
R + R P Y T++D LCK + + A L EM ++G SP+ V Y+ LI G C
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
G L + L+D M LK P+ VTYN L+ L +GK+ +A ++L M+ P+ VT
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
Y +L++G A + ++M RG N Y+++I GL K +EA++L +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ PN V YS L+DGLC+ GK + A E+L+ M G + TY+S + K +
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ + + K++ G + Y++L+DGLC GR+K+A V+ + G + Y+++I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 481 NGLCKEGLFDEALTLMSKM---EDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
GLC G D AL L +M E+ D +T+ ++ L + + +A LL M+ R
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 166/301 (55%), Gaps = 20/301 (6%)
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG--------------------VKPDVV 299
D V ++ +VD + V+ ++L V+I +G + P+ +
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
+++ ++ C + V++A +VF M R P+ +Y ++ GLCK + +DEA+ LL+EM
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 419
E P+ V Y+ LIDGLCK G ++ +L+D M ++G + +TYN+ + LC +
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
DK ++L+++++ P+ TY L++GL K R DA + + ++GY+LN Y+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
I+GL KEG +EA++L KM + GC + + + ++ L +G+ ++A+++L MIA
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 540 L 540
L
Sbjct: 429 L 429
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 255/507 (50%), Gaps = 4/507 (0%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D + M + + P ++ N + V+ A+ +M++ GI PN VT N +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ-GF 154
+C L + A +L ++ +G PD +++ T++ LC ++ + + G
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
DQVTY TLI+ L K + AL L+ + +G + + Y+ I+ +LCK +S A D
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 215 LYSEMIAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L +EM++KG P+VVTY+A++ GFC +G++ +A LL M P+ V+Y L++ +
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+ GK EA+ M+ + + P+ +TYS +M G ++++A DV M +G P
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
N+++ LC+ EA +EE + N V ++++I G C+ ++ A +LD+
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M++ + AD+ TY + +D L K + + L+KK++ KGI P TY ++ C+ G+
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGK 679
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
+ D + + + + YN +I LC G +EA TL+ K+ D T
Sbjct: 680 VDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYA 737
Query: 514 IISALFEKGENDKAEKLLREMIARDLL 540
++ +KG A K+ M R+L+
Sbjct: 738 LMEGYLKKGVPLSAYKVACRMFNRNLI 764
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 253/500 (50%), Gaps = 4/500 (0%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ +R + R P + + +L L KTK + + M+ GI + ++ +
Sbjct: 196 WADRQWRYRHDPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYS 253
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
GQ A VL + + G P+ + NT I +L +AL+F + + G + V
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY +I G C + + E A+ELL + +G P V Y TI+ LCK K + DL +M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 220 IAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
+ G+ P+ VTY+ LI+ +A+ L + K D + Y+ +V AL KEG+
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 279 VREAKNMLAVMIKQG-VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
+ EAK+++ M+ +G PDVVTY+++++G+C + EV+KA+ + M G PN SY
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
++ G+C+ EA ++ + PN +TYS ++ GL + GK+S A +++ EM ++
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK 553
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
G + N L +LC+ + +++ ++KG ++ + ++ G C+ + A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
V D++ + + +TY T+++ L K+G EA LM KM G P+T+ T+I
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673
Query: 518 LFEKGENDKAEKLLREMIAR 537
+ G+ D +L +MI+R
Sbjct: 674 YCQMGKVDDLVAILEKMISR 693
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 192/383 (50%), Gaps = 4/383 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITG-ITPNFVTLNILINCHCYLGQTTSAFSVLANI 114
++ ++ +L K S A L +M G P+ VT ++N C LG+ A +L +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
G+ P+T+++ L+ G+C GK A + + + + +TY+ +++GL + G+
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
A +++R + +G P V N ++ SLC+ A E + KG + NVV ++ +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
I+GFC +L A+ +LD+M L N DV TY LVD LGK+G++ EA ++ M+ +G+
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
P VTY +++ YC + +V+ + M R + YN +I LC + ++EA
Sbjct: 661 DPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADT 718
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
LL ++ + T +L++G K G +A+++ M R D+ L
Sbjct: 719 LLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLV 778
Query: 415 KGHHVDKGIALIKKIIDKG-IQP 436
VD+ L+ +++++G I P
Sbjct: 779 LKGKVDEADKLMLRLVERGHISP 801
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 246/455 (54%), Gaps = 10/455 (2%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
AIS+ + + I + + L N LG F GY ++ L+
Sbjct: 142 AISMCDNVCVNSIIADMLVLAYANNSRFELG-----FEAFKRSGYYGYKLSALSCKPLMI 196
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
L + + +++ + Q + T+ +IN LCK G+ A +++ ++ G P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 192 TVVMYNTIIDSLCKVK---LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
VV YNT+ID CK+ + A + EM+ +SPN+ T++ LI GF L ++
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
+ EM+ +++ P+V++YN L++ L GK+ EA +M M+ GV+P+++TY++L++G+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C + + +A D+F ++ +G P + YN++I CK+ +D+ L EEM+ E I+P+
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
TY+ LI GLC+ G + A +L D++ +G P D++T++ ++ C+ K L+K+
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK-KGYNLNNWTYNTMINGLCKEG 487
+ G++P TYNI++ G CK G +K A + + K + +N +YN ++ G ++G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
++A L+++M + G + + IT+E + + ++G
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 222/392 (56%), Gaps = 5/392 (1%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G++L ++ L+ L K ++ + + + R I+P V +N +I++LCK ++ A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVG---QLKQAIGLLDEMVLKNIDPDVVTYNIL 269
D+ +M G SPNVV+Y+ LI G+C +G ++ +A +L EMV ++ P++ T+NIL
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+D K+ + + + M+ Q VKP+V++Y+SL++G C ++++A + + M GV
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
PN+ +YN +I G CK M+ EAL++ + + +P Y+ LID CK GK+ + +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
L +EM G D+ TYN + LC+ +++ L ++ KG+ PD+ T++IL++G C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC 481
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH-DP 508
+ G + A + +++ K G + TYN ++ G CKEG A + ++ME + +
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 509 ITFETIISALFEKGENDKAEKLLREMIARDLL 540
++ ++ +KG+ + A LL EM+ + L+
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 209/392 (53%), Gaps = 10/392 (2%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D + M++ +I P + FN V+ +L KT + A + M++ G +PN V+ N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 96 NCHCYL---GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+ +C L G+ A +VL +++ P+ TFN LI G L +++ ++L Q
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ + ++Y +LINGLC G+ A+ + ++ G++P ++ YN +I+ CK ++ A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
D++ + +G P Y+ LI +C +G++ L +EM + I PDV TYN L+
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L + G + AK + + +G+ PD+VT+ LM+GYC E KA + M++ G+ P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP-NKVTYSSLIDGLCKTGKVSNAWELL 391
+YNI++ G CK + A N+ +M+ E+ + N +Y+ L+ G + GK+ +A LL
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
+EM +G + ITY + K VD+G
Sbjct: 565 NEMLEKGLVPNRITYE-----IVKEEMVDQGF 591
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 215/404 (53%), Gaps = 5/404 (1%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRG 118
++ +L+K + + ++M I PN T N++IN C G+ A V+ ++ G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 119 YHPDTITFNTLIKGLCL---HGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
P+ +++NTLI G C +GK+++A +++ + T+ LI+G K
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
++++ + + + +KP V+ YN++I+ LC +S A + +M++ G+ PN++TY+ALI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
GFC LK+A+ + + + P YN+L+DA K GK+ + + M ++G+
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
PDV TY+ L+ G C + A+ +F+ + +G+ P++ +++I++ G C+ +A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYNSFLDALC 414
L+EM + P +TY+ ++ G CK G + A + +M R ++ +YN L
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+ ++ L+ ++++KG+ P+ TY I+ + + G + D +
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIE 596
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 138/270 (51%), Gaps = 2/270 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ ++ F ML + P +I +N ++ L S AIS+ +M G+ PN +T N
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN C A + ++ +G P T +N LI C GK+ +++ +
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D TY LI GLC+ G EAA +L ++ +G+ P +V ++ +++ C+ A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKA 489
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL-KNIDPDVVTYNILVD 271
L EM G+ P +TY+ ++ G+C G LK A + +M + + +V +YN+L+
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
++GK+ +A +L M+++G+ P+ +TY
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 258/510 (50%), Gaps = 10/510 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPNFVTLN 92
+ V F RM + P + +N +L +++ + + A ++ +M +PN T
Sbjct: 143 AEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFG 202
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
IL++ G+T+ A + ++ RG P+ +T+ LI GLC G A + ++
Sbjct: 203 ILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS 262
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D V + L++G CK+G+ A ELLR E G + Y+++ID L + + + A
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
F+LY+ M+ K I P+++ Y+ LI G G+++ A+ LL M K I PD YN ++ A
Sbjct: 323 FELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA 382
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L G + E +++ M + PD T++ L+ C V +A ++F + + G +P+
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPS 442
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEK--IIPNKVTYSS--LIDGLCKTGKVSNAW 388
V ++N +I GLCK + EA LL +M+ + + ++++S D + ++G + A+
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAY 502
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
L G DI++YN ++ C+ +D + L+ + KG+ PD TYN L++GL
Sbjct: 503 RDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL-MSKMEDNGCIHD 507
+ GR ++A ++F K + + Y +++ C++ A L M ++ C+ D
Sbjct: 563 HRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDD 620
Query: 508 PITFETIISALFEKGENDKAEKLLREMIAR 537
E I F++GE ++A + L E+ R
Sbjct: 621 ETANE--IEQCFKEGETERALRRLIELDTR 648
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 228/480 (47%), Gaps = 44/480 (9%)
Query: 78 QMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK------ 131
+++ G++ + +LI+ + +G A + + PD T+N +++
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREE 176
Query: 132 ------------------------------GLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
GL G+ A + DD+ +G ++VTY
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
LI+GLC+ G + A +L ++ G P V +N ++D CK+ + AF+L
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
G + YS+LI G + QA L M+ KNI PD++ Y IL+ L K GK+ +
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 282 AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
A +L+ M +G+ PD Y++++ C + + R + M+ P+ ++ I+I
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
+C+ +V EA + E++ P+ T+++LIDGLCK+G++ A LL +M V G+PA
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV-GRPA 475
Query: 402 DII-----TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
+ + N D + + + K + D G PD+ +YN+L++G C+ G I
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
A ++ L KG + ++ TYNT+INGL + G +EA L +D H P + ++++
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFR--HSPAVYRSLMT 593
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 238/527 (45%), Gaps = 44/527 (8%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
+N ML+ +P + F ++ L K S A + M GI+PN VT ILI+ C
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G A + + G +PD++ N L+ G C G++ A + GF L
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y++LI+GL + + A EL + + IKP +++Y +I L K + A L S M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+KGISP+ Y+A+I C G L++ L EM PD T+ IL+ ++ + G VR
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM---------------- 324
EA+ + + K G P V T+++L+DG C E+ +AR + + M
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 325 -----------------------ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
A G +P++ SYN++I G C+ +D AL LL +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELL-DEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ + P+ VTY++LI+GL + G+ A++L + R PA Y S + C+ V
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA---VYRSLMTWSCRKRKVL 602
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
L K + K D T N ++ K G + A +L + L Y +
Sbjct: 603 VAFNLWMKYLKKISCLDDETAN-EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWL 661
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
GLC+ G F EAL + S + + + P + +I L ++ + D A
Sbjct: 662 IGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAA 708
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 194/358 (54%), Gaps = 1/358 (0%)
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
Q +++ + G +D + LI+ KMG E A+E R++ +P V YN I+ +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 204 CKVKLVSH-AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD 262
+ ++ AF +Y+EM+ SPN+ T+ L+ G G+ A + D+M + I P+
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
VTY IL+ L + G +A+ + M G PD V +++L+DG+C + + +A ++
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
+ G ++ Y+ +I GL + + +A L M + I P+ + Y+ LI GL K G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
K+ +A +LL M +G D YN+ + ALC +++G +L ++ + PD CT+
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
IL+ +C+ G +++A+E+F ++ K G + + T+N +I+GLCK G EA L+ KME
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 239/533 (44%), Gaps = 48/533 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
D F+ M I+P + + +++ L + A L +M+ +G P+ V N
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L++ C LG+ AF +L K G+ +++LI GL + +A + + ++L +
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIID----------- 201
+ D + Y LI GL K G+ E AL+LL + +GI P YN +I
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 202 ------------------------SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
S+C+ LV A ++++E+ G SP+V T++ALI G
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVV----TYNILVDALGKEGKVREAKNMLAVMIKQG 293
C G+LK+A LL +M + + + N D + + G + +A LA G
Sbjct: 453 LCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTG 512
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
PD+V+Y+ L++G+C +++ A + N + +G++P+ +YN +I GL ++ +EA
Sbjct: 513 SSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAF 572
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
L D + P Y SL+ C+ KV A+ L + + D T N
Sbjct: 573 KLFYAKDDFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF 630
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCT---YNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
+G ++++I+ + D T Y I L GLC+ GR +A VF L +K
Sbjct: 631 KEGETERA----LRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKIL 686
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ + +I+GLCK D A+ + DN P ++S+L E E
Sbjct: 687 VTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTE 739
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 167/330 (50%), Gaps = 13/330 (3%)
Query: 214 DLY----SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
DLY E+ + G+S + + LI + +G ++A+ M + PDV TYN++
Sbjct: 109 DLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVI 168
Query: 270 VDALGKEGKVREAKNMLAV-----MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+ + +E E MLA M+K P++ T+ LMDG + A+ +F+ M
Sbjct: 169 LRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM 224
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
RG++PN +Y I+I GLC+ D+A L EM P+ V +++L+DG CK G++
Sbjct: 225 TGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRM 284
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
A+ELL G + Y+S +D L + + L ++ K I+PD+ Y IL
Sbjct: 285 VEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL 344
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
+ GL K G+I+DA ++ + KG + + + YN +I LC GL +E +L +M +
Sbjct: 345 IQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREM 534
D T +I ++ G +AE++ E+
Sbjct: 405 FPDACTHTILICSMCRNGLVREAEEIFTEI 434
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 177/361 (49%), Gaps = 9/361 (2%)
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+ L ++ G+ + +I + K+ + A + + M P+V TY+ ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-- 170
Query: 239 CIVGQLKQ-----AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
V ++ A + +EM+ N P++ T+ IL+D L K+G+ +A+ M M +G
Sbjct: 171 --VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+ P+ VTY+ L+ G C + AR +F M G P+ ++N ++ G CK+ + EA
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
LL + + + YSSLIDGL + + + A+EL M + DII Y + L
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL 348
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
K ++ + L+ + KGI PD YN ++ LC G +++ + + ++ + +
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
T+ +I +C+ GL EA + +++E +GC TF +I L + GE +A LL +
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Query: 534 M 534
M
Sbjct: 469 M 469
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 9/279 (3%)
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
+ +++D L ++ L + GV D + L+ Y + KA + F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII-----PNKVTYSSLIDGLCK 380
P+V +YN+++ ++ M +E +L Y +++ PN T+ L+DGL K
Sbjct: 155 EFDCRPDVFTYNVIL----RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCT 440
G+ S+A ++ D+M RG + +TY + LC+ D L ++ G PD
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
+N LLDG CK GR+ +A E+ + K G+ L Y+++I+GL + + +A L + M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
D I + +I L + G+ + A KLL M ++ +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 257/544 (47%), Gaps = 43/544 (7%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ + + RM+ P + ++ ++ L K + + + L ++ME G+ PN T I I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKL---------------- 139
G+ A+ +L + G PD +T+ LI LC KL
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 140 ---------------HRAL----QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
+R L QF ++ G D VT+ L++ LCK G A +
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
L + +GI P + YNT+I L +V + A +L+ M + G+ P TY I +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
G A+ ++M K I P++V N + +L K G+ REAK + + G+ PD VT
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
Y+ +M Y V E+++A + + M G P+V N +I L K VDEA + M
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
K+ P VTY++L+ GL K GK+ A EL + M +G P + IT+N+ D LCK V
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ ++ K++D G PD+ TYN ++ GL K G++K+A F + K Y + T T++
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLL 684
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDP--ITFETIISALFEKGENDKA----EKLLREM 534
G+ K L ++A +++ N C P + +E +I ++ + D A E+L+
Sbjct: 685 PGVVKASLIEDAYKIITNFLYN-CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743
Query: 535 IARD 538
I RD
Sbjct: 744 ICRD 747
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 251/512 (49%), Gaps = 18/512 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD+ F RM +M++ P ++ +N +L L K AI L M G PN +T N
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L +C C + T A +L ++ G PD T+NT+I GL +G++ A+ F +
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ D VT TL+ G+ K E A +++ + +P + + +I S+ + +A
Sbjct: 674 YP-DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 213 FDLYSEMIAKGISPN-------VVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVV 264
++A GI + ++ YS C + A L ++ + P +
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYS------CKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
TYN+L+ L + + A+++ + G PDV TY+ L+D Y ++++ +++ M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE-MDYEKIIPNKVTYSSLIDGLCKTGK 383
+ N ++NI+I GL K VD+AL+L + M P TY LIDGL K+G+
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
+ A +L + M G + YN ++ K D AL K+++ +G++PD+ TY++
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME-DN 502
L+D LC GR+ + F++L + G N + YN +INGL K +EAL L ++M+
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREM 534
G D T+ ++I L G ++A K+ E+
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 233/493 (47%), Gaps = 35/493 (7%)
Query: 77 RQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLH 136
R+M G N + N LI+ T A V ++ G+ P T+++L+ GL
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 137 GKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMY 196
+ + ++ G + + T+ I L + G+ A E+L+R++ G P VV Y
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 197 NTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL 256
+ID+LC + + A +++ +M P+ VTY L+ F L EM
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 257 KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK 316
PDVVT+ ILVDAL K G EA + L VM QG+ P++ TY++L+ G V+ ++
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 317 ARDVFN-----------------------------------AMARRGVTPNVQSYNIMIY 341
A ++F M +G+ PN+ + N +Y
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
L K EA + + ++P+ VTY+ ++ K G++ A +LL EM G
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
D+I NS ++ L K VD+ + ++ + ++P + TYN LL GL K G+I++A E+F
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
+ + +KG N T+NT+ + LCK AL ++ KM D GC+ D T+ TII L +
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 522 GENDKAEKLLREM 534
G+ +A +M
Sbjct: 657 GQVKEAMCFFHQM 669
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 259/573 (45%), Gaps = 75/573 (13%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F +M R P + + +L + + +ME G P+ VT IL++ C
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G AF L + +G P+ T+NTLI GL +L AL+ ++ + G + T
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y I+ K G + +ALE +++ +GI P +V N + SL K A ++ +
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDV----------------- 263
G+ P+ VTY+ ++ + VG++ +AI LL EM+ +PDV
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 264 ------------------VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
VTYN L+ LGK GK++EA + M+++G P+ +T+++L
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
D C +EV A + M G P+V +YN +I+GL K V EA+ +M + +
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVY 674
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEM--HVRGQPADIITYN---------------S 408
P+ VT +L+ G+ K + +A++++ + QPA++ + S
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVS 734
Query: 409 FLDAL--------------------CKGHHVDKGIALIKKII-DKGIQPDMCTYNILLDG 447
F + L CK ++V L +K D G+QP + TYN+L+ G
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 448 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
L + I+ AQ+VF + G + TYN +++ K G DE L +M + C +
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 508 PITFETIISALFEKGENDKAEKLLREMIA-RDL 539
IT +IS L + G D A L ++++ RD
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 214/419 (51%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
KR DT T+ T+ K L + G L +A + GF L+ +Y LI+ L K
Sbjct: 146 KRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCT 205
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A+E+ RR+ G +P++ Y++++ L K + + L EM G+ PNV T++ I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G++ +A +L M + PDVVTY +L+DAL K+ AK + M K
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
PD VTY +L+D + +++ + ++ M + G P+V ++ I++ LCK EA +
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
L+ M + I+PN TY++LI GL + ++ +A EL M G TY F+D K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+ +K+ KGI P++ N L L K GR ++A+++F L G ++ T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
YN M+ K G DEA+ L+S+M +NGC D I ++I+ L++ D+A K+ M
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 236/499 (47%), Gaps = 5/499 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F +M I P I+ N L SL K A + ++ G+ P+ VT N+++ C+
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+G+ A +L+ +++ G PD I N+LI L ++ A + + + VT
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y TL+ GL K G+ + A+EL + +G P + +NT+ D LCK V+ A + +M+
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
G P+V TY+ +I+G GQ+K+A+ +M K + PD VT L+ + K +
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIE 694
Query: 281 EAKNMLAVMIKQGV-KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI- 338
+A ++ + +P + + L+ ++ A + G+ + S +
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 339 MIYGLCKIKMVDEALNLLEEMDYE-KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
+I CK V A L E+ + + P TY+ LI GL + + A ++ ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
G D+ TYN LDA K +D+ L K++ + + T+NI++ GL K G + DA
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 458 QEVFQDLFK-KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
+++ DL + ++ TY +I+GL K G EA L M D GC + + +I+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 517 ALFEKGENDKAEKLLREMI 535
+ GE D A L + M+
Sbjct: 935 GFGKAGEADAACALFKRMV 953
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 221/477 (46%), Gaps = 6/477 (1%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
+M+ M P + +N ++ LVK A+ QM+ + P+FVTL L+
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAS 691
Query: 103 QTTSAFSVLANILKR-GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD-QVT 160
A+ ++ N L P + + LI + + A+ F + ++A G D
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 751
Query: 161 YATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+I CK A L + + G++P + YN +I L + ++ A D++ ++
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ G P+V TY+ L+ + G++ + L EM + + +T+NI++ L K G V
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 280 REAKNMLA-VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+A ++ +M + P TY L+DG + +A+ +F M G PN YNI
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I G K D A L + M E + P+ TYS L+D LC G+V E+ G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKI-IDKGIQPDMCTYNILLDGLCKCGRIKDA 457
D++ YN ++ L K H +++ + L ++ +GI PD+ TYN L+ L G +++A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 514
+++ ++ + G N +T+N +I G G + A + M G + T+E +
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 13/311 (4%)
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
SE + +G+ T S+ Y + G L N+ T N +++AL +
Sbjct: 85 SEEVTRGLKSFPDTDSSFSYFKSVAGNL-------------NLVHTTETCNYMLEALRVD 131
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
GK+ E + +M K+ +K D TY ++ + + +A M G N SY
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
N +I+ L K + EA+ + M E P+ TYSSL+ GL K + + LL EM
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
G ++ T+ + L + +++ ++K++ D+G PD+ TY +L+D LC ++
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
A+EVF+ + + + TY T+++ D S+ME +G + D +TF ++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 517 ALFEKGENDKA 527
AL + G +A
Sbjct: 372 ALCKAGNFGEA 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPNFVTLN 92
VD+ + +F + + + P ++ +N ++ L K+ A+ L +M+ + GITP+ T N
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI G A + I + G P+ TFN LI+G L GK A + ++
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 153 GFQLDQVTYATLIN 166
GF + TY L N
Sbjct: 1097 GFSPNTGTYEQLPN 1110
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 258/513 (50%), Gaps = 10/513 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+++ V + M+ I +I ++ K A+ L +ME G+ P+ V +
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV--- 149
+++ C + A + P ++ +T+I+G AL+ +D
Sbjct: 385 VMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFES 444
Query: 150 -LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
+A GF +++ CK G+ +AA L+ +E +GI+P VV YN ++ + C++K
Sbjct: 445 WIAHGFMCNKIFLL-----FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKN 499
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
+ A ++SEM+ KG+ PN TYS LI GF + A ++++M N + + V YN
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559
Query: 269 LVDALGKEGKVREAKNMLAVMIKQG-VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
+++ L K G+ +AK ML +IK+ +Y+S++DG+ V + + A + + M+
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA 387
G +PNV ++ +I G CK +D AL + EM ++ + Y +LIDG CK + A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Query: 388 WELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
+ L E+ G ++ YNS + +D I L KK+++ GI D+ TY ++DG
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 448 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
L K G I A +++ +L G + + ++NGL K+G F +A ++ +M+ +
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 508 PITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ + T+I+ +G ++A +L EM+ + ++
Sbjct: 800 VLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/573 (25%), Positives = 257/573 (44%), Gaps = 71/573 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D V F M+ ++ P + N VL+SLV++ A + +M + G+ + VT +
Sbjct: 185 MDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLC--------------LHGKL 139
L+ + A + ++ RG PD + F+ ++ C + GKL
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 140 ----------------------HRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
A++ D+++ G + + +L+NG CK + A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
L+L R+E G+ P VM++ +++ CK + A + Y M + I+P+ V +I G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 238 ----------------------------------FCIVGQLKQAIGLLDEMVLKNIDPDV 263
FC G++ A L M K I+P+V
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
V YN ++ A + + A+++ + M+++G++P+ TYS L+DG+ + A DV N
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT-YSSLIDGLCKTG 382
M N YN +I GLCK+ +A +L+ + EK T Y+S+IDG K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
+A E EM G+ +++T+ S ++ CK + +D + + ++ ++ D+ Y
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 502
L+DG CK +K A +F +L + G N YN++I+G G D A+ L KM ++
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREMI 535
G D T+ T+I L + G + A L E++
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 234/493 (47%), Gaps = 40/493 (8%)
Query: 84 ITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL 143
+TP N L+N + + A ++ R P N ++ L + A
Sbjct: 167 LTPR--AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
+ ++ ++ G D VT L+ + + E A+++ RR+ RG +P ++++ + +
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 204 CKVKLVSHAFDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD 262
CK + A DL EM K G+ + TY+++I F G +++A+ ++DEMV I
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 344
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
V+ LV+ K ++ +A ++ M ++G+ PD V +S +++ +C E+ KA + +
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
M + P+ + MI G K + + AL + + +E I + + + CK G
Sbjct: 405 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQG 463
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
KV A L M +G +++ YN+ + A C+ ++D ++ ++++KG++P+ TY+
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 443 ILLD-----------------------------------GLCKCGRIKDAQEVFQDLFK- 466
IL+D GLCK G+ A+E+ Q+L K
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
K Y+++ +YN++I+G K G D A+ +M +NG + +TF ++I+ + D
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 527 AEKLLREMIARDL 539
A ++ EM + +L
Sbjct: 644 ALEMTHEMKSMEL 656
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ D V + M + +P ++ F ++ K+ A+ ++ +M+ + +
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ C +A+++ + + + G P+ +N+LI G GK+ A+ + ++
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D TY T+I+GL K G A +L + GI P +++ +++ L K A
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ EM K ++PNV+ YS +I G G L +A L DEM+ K I D +N+LV
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
++ ++ R G +++N ++ + K +D A++ M K++P ++++ L
Sbjct: 155 NLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSL 214
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
++ + A E+ ++M + G D +T + A + ++ + + ++++ +G +PD
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKK-GYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+++ + CK + A ++ +++ K G + TY ++I KEG +EA+ +M
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+M G I ++++ + E KA L M
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 252/543 (46%), Gaps = 40/543 (7%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N D + M+ I ++ + + K A +L M +G+ P
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI +C + +L + KR T+ T++KG+C G L A +++A
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + + V Y TLI + + A+ +L+ ++ +GI P + YN++I L K K + A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 213 FDLYSEMIAKGISPNVVTYSALIYG----------------------------------- 237
EM+ G+ PN TY A I G
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
+C G++ +A MV + I D TY +L++ L K KV +A+ + M +G+ PD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
V +Y L++G+ + + KA +F+ M G+TPNV YN+++ G C+ +++A LL+
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
EM + + PN VTY ++IDG CK+G ++ A+ L DEM ++G D Y + +D C+ +
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL----NN 473
V++ I + KG +N L++ + K G+ + EV L ++ N+
Sbjct: 747 DVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
TYN MI+ LCKEG + A L +M++ + IT+ ++++ + G + + E
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 534 MIA 536
IA
Sbjct: 866 AIA 868
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 238/483 (49%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NVD + M+ + P ++ ++ L K K A SL +M+ G++ + T +
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI+ +A ++ ++ G + ++ I + G + +A D ++A
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G YA+LI G C+ ELL ++ R I + Y T++ +C + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ EMIA G PNVV Y+ LI F + A+ +L EM + I PD+ YN L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K ++ EA++ L M++ G+KP+ TY + + GY +E A M GV PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+I CK V EA + M + I+ + TY+ L++GL K KV +A E+
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM +G D+ +Y ++ K ++ K ++ +++++G+ P++ YN+LL G C+ G
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
I+ A+E+ ++ KG + N TY T+I+G CK G EA L +M+ G + D +
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 513 TII 515
T++
Sbjct: 737 TLV 739
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 257/513 (50%), Gaps = 12/513 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D + M+ P ++ + ++ + ++ + A+ + ++M+ GI P+ N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI + A S L +++ G P+ T+ I G + A ++ ++
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G ++V LIN CK G+ A R + +GI Y +++ L K V A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ EM KGI+P+V +Y LI GF +G +++A + DEMV + + P+V+ YN+L+
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ G++ +AK +L M +G+ P+ VTY +++DGYC ++ +A +F+ M +G+ P+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
Y ++ G C++ V+ A+ + + + + +++LI+ + K GK E+L+
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 393 EM-----HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
+ G+P D+ TYN +D LCK +++ L ++ + + P + TY LL+G
Sbjct: 791 RLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 448 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-----EDN 502
K GR + VF + G ++ Y+ +IN KEG+ +AL L+ +M D+
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREMI 535
GC T ++S + GE + AEK++ M+
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 43/492 (8%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D + M + I P I +N ++ L K K A S +M G+ PN T I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ + + SA + + + G P+ + LI C GK+ A + ++ QG
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D TY L+NGL K + + A E+ R + G+GI P V Y +I+ K+ + A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ EM+ +G++PNV+ Y+ L+ GFC G++++A LLDEM +K + P+ VTY ++D K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF-------------- 321
G + EA + M +G+ PD Y++L+DG C +N+V +A +F
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769
Query: 322 ----NAMARRGVT--------------------PNVQSYNIMIYGLCKIKMVDEALNLLE 357
N + + G T PN +YNIMI LCK ++ A L
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
+M ++P +TY+SL++G K G+ + + + DE G D I Y+ ++A K
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 418 HVDKGIALI-----KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
K + L+ K +D G + + T LL G K G ++ A++V +++ + Y +
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 473 NWTYNTMINGLC 484
+ T +IN C
Sbjct: 950 SATVIELINESC 961
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 251/527 (47%), Gaps = 21/527 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ V F+ + + + P + +L +L++ + + M + + T ++
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 94 LINCHCYLGQTT---------------------SAFSVLANILKRGYHPDTITFNTLIKG 132
LI HC G A + +++ +G P T++ LI G
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 133 LCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPT 192
LC +L A ++ + G LD TY+ LI+GL K +AA L+ + GI
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
MY+ I + K ++ A L+ MIA G+ P Y++LI G+C ++Q LL
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
EM +NI TY +V + G + A N++ MI G +P+VV Y++L+ + +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
A V M +G+ P++ YN +I GL K K +DEA + L EM + PN TY
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+ I G + + ++A + + EM G + + ++ CK V + + + ++D+
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
GI D TY +L++GL K ++ DA+E+F+++ KG + ++Y +ING K G +A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
++ +M + G + I + ++ GE +KA++LL EM + L
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 220/469 (46%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
A+ L M G+ P T ++LI+ C + + A S+L + G D T++ LI
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
GL A ++++ G + Y I + K G E A L + G+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
Y ++I+ C+ K V ++L EM + I + TY ++ G C G L A ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 252 DEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLV 311
EM+ P+VV Y L+ + + +A +L M +QG+ PD+ Y+SL+ G
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 312 NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
+++AR M G+ PN +Y I G + A ++EM ++PNKV
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
+ LI+ CK GKV A M +G D TY ++ L K VD + +++
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 432 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 491
KGI PD+ +Y +L++G K G ++ A +F ++ ++G N YN ++ G C+ G ++
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 492 ALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
A L+ +M G + +T+ TII + G+ +A +L EM + L+
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 201/450 (44%), Gaps = 40/450 (8%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL-------------------DQVTYATLI 165
+F+ L LC G +AL + ++ + + + D V + L
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
+G G E A+ + G + P + ++D+L + + +D+Y M+ + +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 226 PNVVTYSALIYGFCIVGQLK---------------------QAIGLLDEMVLKNIDPDVV 264
+V TY LI C G ++ A+ L + M+ K + P
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
TY++L+D L K ++ +AK++L M GV D TYS L+DG + A+ + + M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
G+ Y+ I + K ++++A L + M +IP Y+SLI+G C+ V
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
+ELL EM R TY + + +C +D ++K++I G +P++ Y L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
+ + R DA V +++ ++G + + YN++I GL K DEA + + +M +NG
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREM 534
+ T+ IS E E A+K ++EM
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEM 548
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 10/309 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ S F+ M++ +TP +I +N +L ++ A L +M + G+ PN VT
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I+ +C G AF + + +G PD+ + TL+ G C + RA+ +
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKK 760
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRI-EG---RGIKPTVVMYNTIIDSLCKVKL 208
G + LIN + K G+TE E+L R+ +G R KP V YN +ID LCK
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
+ A +L+ +M + P V+TY++L+ G+ +G+ + + DE + I+PD + Y++
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Query: 269 LVDALGKEGKVREAKNMLAVM-----IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
+++A KEG +A ++ M + G K + T +L+ G+ V E+ A V
Sbjct: 881 IINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMEN 940
Query: 324 MARRGVTPN 332
M R P+
Sbjct: 941 MVRLQYIPD 949
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 237/450 (52%), Gaps = 3/450 (0%)
Query: 85 TPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ 144
T + + ++L+ C C L A + ++G++P T T N ++ L ++ A
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 145 FHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
F+ D+ + + T+ +IN LCK G+ + A L +E GIKPT+V YNT++
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+ A + SEM +KG P++ TY+ ++ C G+ + +L EM + PD V
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSV 328
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+YNIL+ G + A M+KQG+ P TY++L+ G + N++ A + +
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
+G+ + +YNI+I G C+ +A L +EM + I P + TY+SLI LC+ K
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
A EL +++ +G D++ N+ +D C ++D+ +L+K++ I PD TYN L
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
+ GLC G+ ++A+E+ ++ ++G ++ +YNT+I+G K+G A + +M G
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREM 534
+T+ ++ L + E + AE+LLREM
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 227/450 (50%), Gaps = 3/450 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD+ + F M + P N +LT L + A M I N T NI
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+IN C G+ A L + G P +T+NTL++G L G++ A ++ ++G
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
FQ D TY +++ +C G+ A E+LR ++ G+ P V YN +I + AF
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
EM+ +G+ P TY+ LI+G + +++ A L+ E+ K I D VTYNIL++
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+ G ++A + M+ G++P TY+SL+ C N+ +A ++F + +G+ P++
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
N ++ G C I +D A +LL+EMD I P+ VTY+ L+ GLC GK A EL+ E
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M RG D I+YN+ + K + +++ G P + TYN LL GL K
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+ A+E+ +++ +G N+ ++ ++I +
Sbjct: 588 GELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 231/469 (49%), Gaps = 3/469 (0%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFS 109
T I F+ ++ + + AI M+ G P T N ++ L + +A+
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
A++ + + TFN +I LC GKL +A F + G + VTY TL+ G
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
G+ E A ++ ++ +G +P + YN I+ +C A ++ EM G+ P+ V
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSV 328
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
+Y+ LI G G L+ A DEMV + + P TYN L+ L E K+ A+ ++ +
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
++G+ D VTY+ L++GYC + KA + + M G+ P +Y +IY LC+
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
EA L E++ + + P+ V ++L+DG C G + A+ LL EM + D +TYN
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+ LC ++ L+ ++ +GI+PD +YN L+ G K G K A V ++ G+
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
N TYN ++ GL K + A L+ +M+ G + + +F ++I A+
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 203/413 (49%), Gaps = 38/413 (9%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+ + L+ C++ + A+E ++ +G P N I+ L ++ + +A+ Y++
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M I NV T++ +I C G+LK+A G L M + I P +VTYN LV G+
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+ A+ +++ M +G +PD+ TY+ ++ C NE +A +V M G+ P+ SYNI
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMC--NE-GRASEVLREMKEIGLVPDSVSYNI 332
Query: 339 -----------------------------------MIYGLCKIKMVDEALNLLEEMDYEK 363
+I+GL ++ A L+ E+ +
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I+ + VTY+ LI+G C+ G A+ L DEM G TY S + LC+ + +
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
L +K++ KG++PD+ N L+DG C G + A + +++ N ++ TYN ++ GL
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
C EG F+EA LM +M+ G D I++ T+IS +KG+ A + EM++
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+D S M M I P + +N ++ L + A L +M+ GI P+ ++ N
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ + G T AF V +L G++P +T+N L+KGL + + A + ++ ++
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Query: 153 GFQLDQVTYATLINGLCKM 171
G + ++ ++I + +
Sbjct: 602 GIVPNDSSFCSVIEAMSNL 620
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 211/385 (54%), Gaps = 9/385 (2%)
Query: 145 FHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
F+ ++L GF L+ + L+N CK G A ++ I R ++PTVV +NT+I+ C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
KV + F L +M P+V TYSALI C ++ A GL DEM + + P+ V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+ L+ + G++ K M+ +G++PD+V Y++L++G+C ++ AR++ + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
RRG+ P+ +Y +I G C+ V+ AL + +EMD I ++V +S+L+ G+CK G+V
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
+A L EM G D +TY +DA CK G L+K++ G P + TYN+L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
L+GLCK G++K+A + + G ++ TYNT++ G + + + + K E G
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA--NSSKRYIQKPE-IGI 583
Query: 505 IHDPITFETIISALFEKGENDKAEK 529
+ D ++++I++ L D+A K
Sbjct: 584 VADLASYKSIVNEL------DRASK 602
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 186/347 (53%)
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
L T + + IL G+ + FN L+ C G + A + D++ + Q V+
Sbjct: 218 LNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVS 277
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ TLING CK+G + L ++E +P V Y+ +I++LCK + A L+ EM
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+G+ PN V ++ LI+G G++ +M+ K + PD+V YN LV+ K G +
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A+N++ MI++G++PD +TY++L+DG+C +V A ++ M + G+ + ++ ++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G+CK V +A L EM I P+ VTY+ ++D CK G ++LL EM G
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
++TYN L+ LCK + L+ +++ G+ PD TYN LL+G
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 203/423 (47%), Gaps = 9/423 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ D + F + R PI +L ++K T ++ G N NI
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+N C G + A V I KR P ++FNTLI G C G L + +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D TY+ LIN LCK + + A L + RG+ P V++ T+I + +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ Y +M++KG+ P++V Y+ L+ GFC G L A ++D M+ + + PD +TY L+D
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+ G V A + M + G++ D V +S+L+ G C V A M R G+ P+
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y +M+ CK LL+EM + +P+ VTY+ L++GLCK G++ NA LLD
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK---GIQPDMCTYNILLDGLCK 450
M G D ITYN+ L+ GHH + K+ I K GI D+ +Y +++ L +
Sbjct: 546 MLNIGVVPDDITYNTLLE----GHHRHANSS--KRYIQKPEIGIVADLASYKSIVNELDR 599
Query: 451 CGR 453
+
Sbjct: 600 ASK 602
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 192/365 (52%)
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
L++ + K+ T I G V ++N +++ CK +S A ++ E+
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
+ + P VV+++ LI G+C VG L + L +M PDV TY+ L++AL KE K+
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 282 AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
A + M K+G+ P+ V +++L+ G+ E++ ++ + M +G+ P++ YN ++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
G CK + A N+++ M + P+K+TY++LIDG C+ G V A E+ EM G
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
D + +++ + +CK V +++++ GI+PD TY +++D CK G + ++
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
+++ G+ + TYN ++NGLCK G A L+ M + G + D IT+ T++
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568
Query: 522 GENDK 526
+ K
Sbjct: 569 ANSSK 573
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 182/337 (54%)
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
++D + K+ + Y E++ G NV ++ L+ FC G + A + DE+ ++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
+ P VV++N L++ K G + E + M K +PDV TYS+L++ C N+++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
+F+ M +RG+ PN + +I+G + +D ++M + + P+ V Y++L++G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
CK G + A ++D M RG D ITY + +D C+G V+ + + K++ GI+ D
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
++ L+ G+CK GR+ DA+ +++ + G ++ TY M++ CK+G L+ +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
M+ +G + +T+ +++ L + G+ A+ LL M+
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 159/310 (51%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ D F+ + + + P ++ FN ++ K + L QME + P+ T +
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN C + A + + KRG P+ + F TLI G +G++ + + +L++
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G Q D V Y TL+NG CK G AA ++ + RG++P + Y T+ID C+ V A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ EM GI + V +SAL+ G C G++ A L EM+ I PD VTY +++DA
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K+G + +L M G P VVTY+ L++G C + ++ A + +AM GV P+
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 333 VQSYNIMIYG 342
+YN ++ G
Sbjct: 555 DITYNTLLEG 564
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 91/173 (52%)
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
N ++ L++ CK G +S+A ++ DE+ R ++++N+ ++ CK ++D+G L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
++ +PD+ TY+ L++ LCK ++ A +F ++ K+G N+ + T+I+G +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
G D KM G D + + T+++ + G+ A ++ MI R L
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%)
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+L+D + K W E+ G P ++ +N ++ CK ++ + +I +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
+QP + ++N L++G CK G + + + + K + +TY+ +IN LCKE D A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
L +M G I + + F T+I GE D ++ ++M+++ L
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL 376
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%)
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+I+D G ++ +NIL++ CK G I DAQ+VF ++ K+ ++NT+ING CK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
DE L +ME + D T+ +I+AL ++ + D A L EM R L+
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 234/433 (54%), Gaps = 5/433 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+R ++ I +N + SL K + A + M+ G++PN L L++
Sbjct: 92 FSR-FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAE 150
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ A ++L + + N+L+ L ++ A++ D+ L D T
Sbjct: 151 KGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ LI GLC +G+ E ALELL + G G +P +V YNT+I CK ++ A +++ ++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 221 AKGI-SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ + SP+VVTY+++I G+C G++++A LLD+M+ I P VT+N+LVD K G++
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
A+ + MI G PDVVT++SL+DGYC V +V++ ++ M RG+ PN +Y+I+
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I LC + +A LL ++ + IIP Y+ +IDG CK GKV+ A +++EM +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
D IT+ + C + + +++ K++ G PD T + LL L K G K+A
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 460 VFQDLFKKGYNLN 472
+ Q + +KG + N
Sbjct: 509 LNQ-IARKGQSNN 520
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 216/415 (52%), Gaps = 7/415 (1%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
T+N L + LC G A Q + + + G + L++ + G+ A LL +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
+ ++ ++ N+++++L K+ V A L+ E + + T++ LI G C VG+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG--VKPDVVTYS 302
++A+ LL M +PD+VTYN L+ K ++ +A M +K G PDVVTY+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYT 281
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
S++ GYC ++ +A + + M R G+ P ++N+++ G K + A + +M
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
P+ VT++SLIDG C+ G+VS + L +EM+ RG + TY+ ++ALC + + K
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
L+ ++ K I P YN ++DG CK G++ +A + +++ KK + T+ +I G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
C +G EA+++ KM GC D IT +++S L + G +A L IAR
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL--NQIAR 514
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+D + F+ L+ + FN ++ L A+ L M G P+ VT N
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 94 LINCHCYLGQTTSAFSVLANILKRGY--HPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
LI C + A + ++ K G PD +T+ ++I G C GK+ A DD+L
Sbjct: 247 LIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G VT+ L++G K G+ A E+ ++ G P VV + ++ID C+V VS
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
F L+ EM A+G+ PN TYS LI C +L +A LL ++ K+I P YN ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
K GKV EA ++ M K+ KPD +T++ L+ G+C+ + +A +F+ M G +P
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 332 NVQSYNIMIYGLCKIKMVDEALNL 355
+ + + ++ L K M EA +L
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL 509
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 161/353 (45%), Gaps = 38/353 (10%)
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
I+ + YN + SLCK L A ++ M + G+SPN L+ F G+L A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
L L+ + EG ++L ++K
Sbjct: 159 AL------------------LLQSFEVEGCCMVVNSLLNTLVK----------------- 183
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
++ V A +F+ R + +++NI+I GLC + ++AL LL M P+
Sbjct: 184 --LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHVDKGIALIK 427
VTY++LI G CK+ +++ A E+ ++ D++TY S + CK + + +L+
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
++ GI P T+N+L+DG K G + A+E+ + G + T+ ++I+G C+ G
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ L +M G + T+ +I+AL + KA +LL ++ ++D++
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 234/433 (54%), Gaps = 5/433 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+R ++ I +N + SL K + A + M+ G++PN L L++
Sbjct: 92 FSR-FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAE 150
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ A ++L + + N+L+ L ++ A++ D+ L D T
Sbjct: 151 KGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ LI GLC +G+ E ALELL + G G +P +V YNT+I CK ++ A +++ ++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 221 AKGI-SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ + SP+VVTY+++I G+C G++++A LLD+M+ I P VT+N+LVD K G++
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
A+ + MI G PDVVT++SL+DGYC V +V++ ++ M RG+ PN +Y+I+
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I LC + +A LL ++ + IIP Y+ +IDG CK GKV+ A +++EM +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
D IT+ + C + + +++ K++ G PD T + LL L K G K+A
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 460 VFQDLFKKGYNLN 472
+ Q + +KG + N
Sbjct: 509 LNQ-IARKGQSNN 520
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 216/415 (52%), Gaps = 7/415 (1%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
T+N L + LC G A Q + + + G + L++ + G+ A LL +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
+ ++ ++ N+++++L K+ V A L+ E + + T++ LI G C VG+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG--VKPDVVTYS 302
++A+ LL M +PD+VTYN L+ K ++ +A M +K G PDVVTY+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYT 281
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
S++ GYC ++ +A + + M R G+ P ++N+++ G K + A + +M
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
P+ VT++SLIDG C+ G+VS + L +EM+ RG + TY+ ++ALC + + K
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
L+ ++ K I P YN ++DG CK G++ +A + +++ KK + T+ +I G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
C +G EA+++ KM GC D IT +++S L + G +A L IAR
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL--NQIAR 514
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+D + F+ L+ + FN ++ L A+ L M G P+ VT N
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 94 LINCHCYLGQTTSAFSVLANILKRGY--HPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
LI C + A + ++ K G PD +T+ ++I G C GK+ A DD+L
Sbjct: 247 LIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G VT+ L++G K G+ A E+ ++ G P VV + ++ID C+V VS
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
F L+ EM A+G+ PN TYS LI C +L +A LL ++ K+I P YN ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
K GKV EA ++ M K+ KPD +T++ L+ G+C+ + +A +F+ M G +P
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 332 NVQSYNIMIYGLCKIKMVDEALNL 355
+ + + ++ L K M EA +L
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL 509
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 161/353 (45%), Gaps = 38/353 (10%)
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
I+ + YN + SLCK L A ++ M + G+SPN L+ F G+L A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
L L+ + EG ++L ++K
Sbjct: 159 AL------------------LLQSFEVEGCCMVVNSLLNTLVK----------------- 183
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
++ V A +F+ R + +++NI+I GLC + ++AL LL M P+
Sbjct: 184 --LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHVDKGIALIK 427
VTY++LI G CK+ +++ A E+ ++ D++TY S + CK + + +L+
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
++ GI P T+N+L+DG K G + A+E+ + G + T+ ++I+G C+ G
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ L +M G + T+ +I+AL + KA +LL ++ ++D++
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 262/505 (51%), Gaps = 9/505 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + + F +R+ + P NK + L+ + ++ + G TP+ + N
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA-Q 152
+++ C LGQ A ++ ++ + G PD I++N+LI G C +G + A + + A
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 153 GF--QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
GF + D V++ +L NG KM + + + + P VV Y+T ID+ CK +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG-VMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A + M +SPNVVT++ LI G+C G L+ A+ L EM + +VVTY L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
D K+G+++ A+ M + M++ V+P+ + Y++++DG+ + + A M +G+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
++ +Y ++I GLC + EA ++E+M+ ++P+ V ++++++ K+G++ A +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
++ RG D++ ++ +D + K + + A++ I+K + Y +L+D LCK
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHE--AIVYFCIEKA---NDVMYTVLIDALCK 415
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
G + + +F + + G + + Y + I GLCK+G +A L ++M G + D +
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 511 FETIISALFEKGENDKAEKLLREMI 535
+ T+I L KG +A ++ EM+
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEML 500
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 181/364 (49%), Gaps = 4/364 (1%)
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
AL+ L R+ P N I L + + ++++G +P+ ++++++
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVS 64
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML-AVMIKQGV- 294
C +GQ+K A ++ M +PDV++YN L+D + G +R A +L ++ G
Sbjct: 65 FVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFI 124
Query: 295 -KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
KPD+V+++SL +G+ + +++ V+ + + +PNV +Y+ I CK + AL
Sbjct: 125 CKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
M + + PN VT++ LIDG CK G + A L EM +++TY + +D
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
CK + + + ++++ ++P+ Y ++DG + G +A + + +G L+
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
Y +I+GLC G EA ++ ME + + D + F T+++A F+ G A + +
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 534 MIAR 537
+I R
Sbjct: 364 LIER 367
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 160/297 (53%), Gaps = 4/297 (1%)
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
++ L +V + P ++N +V + K G+V+ A++++ M + G +PDV++Y+SL+D
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 307 GYCLVNEVNKARDVFNAM-ARRGV--TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
G+C ++ A V ++ A G P++ S+N + G K+KM+DE + M +
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKC 158
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
PN VTYS+ ID CK+G++ A + M +++T+ +D CK ++ +
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+L K++ + ++ TY L+DG CK G ++ A+E++ + + N+ Y T+I+G
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ G D A+ ++KM + G D + IIS L G+ +A +++ +M DL+
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 40/362 (11%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
VS + M ++R++ ++ + ++ K A + +M + PN + +I+
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
G + +A LA +L +G D + +I GLC +GKL A + +D+
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D V + T++N K G+ +AA+ + ++ RG +P VV +T+ID
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID--------------- 381
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
GI+ N + A++Y FCI + V Y +L+DAL KE
Sbjct: 382 ------GIAKNGQLHEAIVY-FCIE------------------KANDVMYTVLIDALCKE 416
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
G E + + + + + G+ PD Y+S + G C + A + M + G+ ++ +Y
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
+IYGL ++ EA + +EM I P+ + LI K G ++ A +LL +M
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
Query: 397 RG 398
RG
Sbjct: 537 RG 538
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 130/260 (50%), Gaps = 5/260 (1%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D+ + F +ML + I + +++ L A + ME + + P+ V +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+N + G+ +A ++ +++RG+ PD + +T+I G+ +G+LH A+ + A
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA--- 401
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ V Y LI+ LCK G L +I G+ P MY + I LCK + AF
Sbjct: 402 --NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L + M+ +G+ +++ Y+ LIYG G + +A + DEM+ I PD +++L+ A
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 275 KEGKVREAKNMLAVMIKQGV 294
KEG + A ++L M ++G+
Sbjct: 520 KEGNMAAASDLLLDMQRRGL 539
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 5/196 (2%)
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
MV EAL L + +P+ T + I L + + + L + RG ++N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL-FK 466
S + +CK V ++ + G +PD+ +YN L+DG C+ G I+ A V + L
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 467 KGY--NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEN 524
G+ + ++N++ NG K + DE M M C + +T+ T I + GE
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGEL 179
Query: 525 DKAEKLLREMIARDLL 540
A K M RD L
Sbjct: 180 QLALKSFHSM-KRDAL 194
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 247/486 (50%), Gaps = 3/486 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ V F+ M ++N+ + LV+ + A ++ M+ G + T +
Sbjct: 25 IDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSR 84
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
I+ C + + ++L+++ G+ PD FN + LC K+ A+Q ++ +G
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D V+Y LINGL + G+ A+E+ + G+ P ++ LC + V A+
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 214 DLYSEMIAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ +E I + + V Y+ALI GFC G++++A L M +PD+VTYN+L++
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD-VFNAMARRGVTP 331
++ A+ ++A M++ G++ D +Y+ L+ +C V+ +K + + M RG
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC- 323
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+V SY+ +I C+ +A L EEM + ++ N VTY+SLI + G S A +LL
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
D+M G D I Y + LD LCK +VDK + +I+ I PD +YN L+ GLC+
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
GR+ +A ++F+D+ K + T+ +I GL + A + +M D G D
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 512 ETIISA 517
+T+I A
Sbjct: 504 DTLIKA 509
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 215/470 (45%), Gaps = 36/470 (7%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
G +A V + Y + +N I L + A + D+ GF L TY
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
+ I+GLCK+ + + LL +E G P + +N +D LC+ V A + M+
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD------------------- 262
+G P+VV+Y+ LI G G++ A+ + + M+ + PD
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 263 -----------------VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
V YN L+ K G++ +A+ + + M K G +PD+VTY+ L+
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+ Y N + +A V M R G+ + SYN ++ C++ D+ N + + +
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
+ V+YS+LI+ C+ A+ L +EM +G +++TY S + A + + L
Sbjct: 323 CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKL 382
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+ ++ + G+ PD Y +LD LCK G + A VF D+ + + +YN++I+GLC+
Sbjct: 383 LDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCR 442
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
G EA+ L M+ C D +TF+ II L + A K+ +M+
Sbjct: 443 SGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 217/434 (50%), Gaps = 9/434 (2%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+++ ++ L K K + +L ME G P+ N+ ++ C + A ++
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+RG PD +++ LI GL GK+ A++ + ++ G D A L+ GLC + +
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 176 AALELL-RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
A E++ I+ +K + V+YN +I CK + A L S M G P++VTY+ L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ + LK+A G++ EMV I D +YN L L + +V M+K+ +
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL---LKRHCRVSHPDKCYNFMVKE-M 317
Query: 295 KP----DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+P DVV+YS+L++ +C + KA +F M ++G+ NV +Y +I +
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
A LL++M + P+++ Y++++D LCK+G V A+ + ++M D I+YNS +
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
LC+ V + I L + + K PD T+ ++ GL + ++ A +V+ + KG+
Sbjct: 438 SGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Query: 471 LNNWTYNTMINGLC 484
L+ +T+I C
Sbjct: 498 LDRDVSDTLIKASC 511
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 190/407 (46%), Gaps = 36/407 (8%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M + P I FN L L + A+ M G P+ V+ ILIN G+
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF-HDDVLAQGFQLDQVTYA 162
T A + +++ G PD L+ GLC K+ A + +++ + +L V Y
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
LI+G CK G+ E A L + G +P +V YN +++ ++ A + +EM+
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 223 GIS-------------------------------P----NVVTYSALIYGFCIVGQLKQA 247
GI P +VV+YS LI FC ++A
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKA 344
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
L +EM K + +VVTY L+ A +EG AK +L M + G+ PD + Y++++D
Sbjct: 345 YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
C V+KA VFN M +TP+ SYN +I GLC+ V EA+ L E+M ++ P+
Sbjct: 405 LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
++T+ +I GL + K+S A+++ D+M +G D ++ + A C
Sbjct: 465 ELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 195/418 (46%), Gaps = 36/418 (8%)
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
++ Y + I L K G + A+++ + + YN I L + A +Y
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
+M G S TYS I G C V + LL +M PD+ +N+ +D L +E
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
KV A M+++G +PDVV+Y+ L++G +V A +++NAM R GV+P+ ++
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 338 IMIYGLCKIKMVDEALNLL-EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
++ GLC + VD A ++ EE+ ++ + V Y++LI G CK G++ A L M
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ------------------PDM 438
G D++TYN L+ + + + ++ +++ GIQ PD
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 439 C-----------------TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
C +Y+ L++ C+ + A +F+++ +KG +N TY ++I
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+EG A L+ +M + G D I + TI+ L + G DKA + +MI ++
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 2/300 (0%)
Query: 48 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSA 107
R+ + +N +++ K A +L M G P+ VT N+L+N + A
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 108 FSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH-DDVLAQGFQLDQVTYATLIN 166
V+A +++ G D ++N L+K C + F ++ +GF D V+Y+TLI
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIE 333
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
C+ T A L + +G+ VV Y ++I + + S A L +M G+SP
Sbjct: 334 TFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ + Y+ ++ C G + +A G+ ++M+ I PD ++YN L+ L + G+V EA +
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M + PD +T+ ++ G +++ A V++ M +G T + + +I C +
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 99/205 (48%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D +F + ++ R ++ ++ ++ + + + A L +M G+ N VT L
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I G ++ A +L + + G PD I + T++ LC G + +A +D++
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
D ++Y +LI+GLC+ G+ A++L ++G+ P + + II L + K +S A+
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Query: 215 LYSEMIAKGISPNVVTYSALIYGFC 239
++ +M+ KG + + LI C
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 86/174 (49%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N F M Q + ++ + ++ + ++ + S A L QM G++P+ +
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+++ C G A+ V ++++ PD I++N+LI GLC G++ A++ +D+ +
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
D++T+ +I GL + + AA ++ ++ +G + +T+I + C +
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 232/448 (51%), Gaps = 22/448 (4%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD+ + ++M Q + P ++ +N +L + + +SL + M G+ + ++ +
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ LG A + N+L RG DTIT N +I GLC K++ A + D+V
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ TY L +G K+G + A + +E +GI PT+ MYNT+I K + ++
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
DL E+ A+G++P V TY ALI G+C +G + +A EM+ K I +V + + ++L
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA------------RDVF 321
+ K+ EA +L +V + L+ GY + E +A V
Sbjct: 657 FRLDKIDEACLLLQ---------KIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE 707
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSLIDGLCK 380
N+ ++ + PN YN+ I GLCK +++A L ++ ++ IP++ TY+ LI G
Sbjct: 708 NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAI 767
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCT 440
G ++ A+ L DEM ++G +I+TYN+ + LCK +VD+ L+ K+ KGI P+ T
Sbjct: 768 AGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAIT 827
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKG 468
YN L+DGL K G + +A + + + +KG
Sbjct: 828 YNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 237/462 (51%), Gaps = 1/462 (0%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPNFVTLNILINCHC 99
+++M+ ++P + + V+ + ++ + A+ +++ E + G+ N VT N LIN +
Sbjct: 213 YDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYA 272
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
+G VL + +RG + +T+ +LIKG C G + A + + + DQ
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 332
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y L++G C+ GQ A+ + + G++ + N++I+ CK + A ++S M
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ P+ TY+ L+ G+C G + +A+ L D+M K + P V+TYNIL+ + G
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ ++ +M+K+GV D ++ S+L++ + + N+A ++ + RG+ + + N+M
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I GLCK++ V+EA +L+ ++ + P TY +L G K G + A+ + + M +G
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
I YN+ + K H++K L+ ++ +G+ P + TY L+ G C G I A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
++ +KG LN + + N L + DEA L+ K+ D
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 237/513 (46%), Gaps = 41/513 (7%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ D V + M+++ + N ++ K+ A + +M + P+ T N
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ +C G A + + ++ P +T+N L+KG G H L +L +G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D+++ +TL+ L K+G A++L + RG+ + N +I LCK++ V+ A
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++ + P V TY AL +G+ VG LK+A + + M K I P + YN L+
Sbjct: 527 EILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGA 586
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K + + +++ + +G+ P V TY +L+ G+C + ++KA M +G+T NV
Sbjct: 587 FKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEM--------DYEKI--------------------- 364
+ + L ++ +DEA LL+++ Y+ +
Sbjct: 647 NICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV 706
Query: 365 ---------IPNKVTYSSLIDGLCKTGKVSNAWELLDEM--HVRGQPADIITYNSFLDAL 413
+PN + Y+ I GLCK GK+ +A +L ++ R P D TY +
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGC 765
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
++K L ++ KGI P++ TYN L+ GLCK G + AQ + L +KG N
Sbjct: 766 AIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNA 825
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
TYNT+I+GL K G EA+ L KM + G +
Sbjct: 826 ITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 216/439 (49%), Gaps = 1/439 (0%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ-GFQLDQVT 160
G+ A V ++ PD T + ++ C G + +A+ F + + G +L+ VT
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y +LING +G E +LR + RG+ VV Y ++I CK L+ A ++ +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
K + + Y L+ G+C GQ++ A+ + D M+ + + N L++ K G++
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA+ + + M +KPD TY++L+DGYC V++A + + M ++ V P V +YNI++
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G +I + L+L + M + ++++ S+L++ L K G + A +L + + RG
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
D IT N + LCK V++ ++ + +P + TY L G K G +K+A V
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
+ + +KG YNT+I+G K ++ L+ ++ G T+ +I+
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 521 KGENDKAEKLLREMIARDL 539
G DKA EMI + +
Sbjct: 624 IGMIDKAYATCFEMIEKGI 642
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 249/510 (48%), Gaps = 5/510 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + + F+ M P ++ N +L++LV+ A+ + QM ++P+ T +I
Sbjct: 171 VKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSI 230
Query: 94 LINCHCYLGQTTSAFSVLANILKR--GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
++N +C G A V A + G + +T+N+LI G + G + + +
Sbjct: 231 VVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+G + VTY +LI G CK G E A + ++ + + MY ++D C+ +
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 349
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A ++ MI G+ N ++LI G+C GQL +A + M ++ PD TYN LVD
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ G V EA + M ++ V P V+TY+ L+ GY + + ++ M +RGV
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 469
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+ S + ++ L K+ +EA+ L E + ++ + +T + +I GLCK KV+ A E+L
Sbjct: 470 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 392 DEMHV-RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
D +++ R +PA + TY + K ++ + A+ + + KGI P + YN L+ G K
Sbjct: 530 DNVNIFRCKPA-VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
+ ++ +L +G TY +I G C G+ D+A +M + G +
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 511 FETIISALFEKGENDKAEKLLREMIARDLL 540
I ++LF + D+A LL++++ DLL
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 198/367 (53%), Gaps = 11/367 (2%)
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
EL+R + PTV ++ I+ + LV +A ++ M G P++++ ++L+
Sbjct: 143 ELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ-----G 293
G+ A+ + D+M+ + PDV T +I+V+A + G V +A V K+ G
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA----MVFAKETESSLG 256
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
++ +VVTY+SL++GY ++ +V V M+ RGV+ NV +Y +I G CK +++EA
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
++ E + +K++ ++ Y L+DG C+TG++ +A + D M G + NS ++
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
CK + + + ++ D ++PD TYN L+DG C+ G + +A ++ + +K
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
TYN ++ G + G F + L+L M G D I+ T++ ALF+ G+ ++A KL
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 534 MIARDLL 540
++AR LL
Sbjct: 497 VLARGLL 503
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 238/478 (49%), Gaps = 4/478 (0%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
R + ++P ++ ++++ +L + K S A+S+ Q + P T N +I G
Sbjct: 154 RNTYVSVSPAVL--SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEG 211
Query: 103 QTTSAFSVLANILKRG-YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
Q V + G PDTIT++ LI G+ A++ D++ Q + Y
Sbjct: 212 QHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIY 271
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
TL+ K+G+ E AL+L ++ G PTV Y +I L K V A+ Y +M+
Sbjct: 272 TTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR 331
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL-GKEGKVR 280
G++P+VV + L+ VG++++ + EM + P VV+YN ++ AL + V
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
E + M V P TYS L+DGYC N V KA + M +G P +Y +I
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
L K K + A L +E+ + Y+ +I K GK+S A +L +EM +G
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
D+ YN+ + + K +++ +L++K+ + G + D+ ++NI+L+G + G + A E+
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
F+ + G + TYNT++ G+F+EA +M +M+D G +D IT+ +I+ A+
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 221/435 (50%), Gaps = 8/435 (1%)
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL-DQVTYAT 163
+ A SV R P + T+N++I L G+ + + + ++ +G D +TY+
Sbjct: 179 SKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
LI+ K+G+ ++A+ L ++ ++PT +Y T++ KV V A DL+ EM G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
SP V TY+ LI G G++ +A G +M+ + PDVV N L++ LGK G+V E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 284 NMLAVMIKQGVKPDVVTYS----SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
N+ + M P VV+Y+ +L + V+EV+ F+ M V+P+ +Y+I+
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS---SWFDKMKADSVSPSEFTYSIL 415
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I G CK V++AL LLEEMD + P Y SLI+ L K + A EL E+
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
Y + K + + + L ++ ++G PD+ YN L+ G+ K G I +A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+ + + + G + ++N ++NG + G+ A+ + ++ +G D +T+ T++
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 520 EKGENDKAEKLLREM 534
G ++A +++REM
Sbjct: 596 HAGMFEEAARMMREM 610
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 222/453 (49%), Gaps = 44/453 (9%)
Query: 116 KRGYHPDTITFNTLIKGL---CLHGKLHRALQFHDDVLAQGF-QLDQVTYATLINGLCKM 171
+R + D T+ TLI+ L L+G+++R +Q +V+ + + + L+ L +
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQ---EVVRNTYVSVSPAVLSELVKALGRA 175
Query: 172 GQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG-ISPNVVT 230
AL + + +GR KPT YN++I L + ++Y+EM +G P+ +T
Sbjct: 176 KMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT 235
Query: 231 YSALIYGF-------------------CI----------------VGQLKQAIGLLDEMV 255
YSALI + C+ VG++++A+ L +EM
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
P V TY L+ LGK G+V EA M++ G+ PDVV ++LM+ V V
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM-VDEALNLLEEMDYEKIIPNKVTYSSL 374
+ +VF+ M TP V SYN +I L + K V E + ++M + + P++ TYS L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 375 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI 434
IDG CKT +V A LL+EM +G P Y S ++AL K + L K++ +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 435 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 494
Y +++ KCG++ +A ++F ++ +G + + YN +++G+ K G+ +EA +
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 495 LMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
L+ KME+NGC D + I++ G +A
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 205/413 (49%), Gaps = 3/413 (0%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P I ++ +++S K +AI L +M+ + P L+ + +G+ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ + G P T+ LIKGL G++ A F+ D+L G D V L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL-VSHAFDLYSEMIAKGISPNVV 229
+G+ E + + PTVV YNT+I +L + K VS + +M A +SP+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TYS LI G+C ++++A+ LL+EM K P Y L++ALGK K EA N L
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK-AKRYEAANELFKE 469
Query: 290 IKQGV-KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
+K+ Y+ ++ + ++++A D+FN M +G P+V +YN ++ G+ K M
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
++EA +LL +M+ + +++ +++G +TG A E+ + + G D +TYN+
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
L ++ +++++ DKG + D TY+ +LD + KD F
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 114/242 (47%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V + S+F++M ++P ++ ++ KT A+ L +M+ G P
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN + +A + + + + + + +IK GKL A+ +++ Q
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D Y L++G+ K G A LLR++E G + + +N I++ + + A
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ + GI P+ VTY+ L+ F G ++A ++ EM K + D +TY+ ++DA
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 273 LG 274
+G
Sbjct: 629 VG 630
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 7/222 (3%)
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM---DYEKIIPNKVTYSSLIDGLC 379
A RR + +Y +I L + ++ E ++E+ Y + P S L+ L
Sbjct: 116 AGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP--AVLSELVKALG 173
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG-IQPDM 438
+ VS A + + R TYNS + L + +K + ++ ++G PD
Sbjct: 174 RAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDT 233
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TY+ L+ K GR A +F ++ Y T++ K G ++AL L +
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
M+ GC T+ +I L + G D+A ++M+ RD L
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML-RDGL 334
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 236/468 (50%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P +I N +L+ LVK++ A + +M G + + + IL+ C G+ +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ +G P+ + +NT+I G C G + A ++ +GF T+ T+ING CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G A+ LL ++ RG++ +V N IID+ + + +IA P+V T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+ LI C G+ + A+G LDE K + P+ ++Y L+ A K + A +L M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
++G KPD+VTY L+ G + ++ A ++ + RGV+P+ YN+++ GLCK
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
A L EM I+P+ Y++LIDG ++G A ++ +G D++ +N+ +
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
C+ +D+ +A + ++ ++ + PD TY+ ++DG K + A ++F+ + K
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
N TY ++ING C +G F A +M+ + + +T+ T+I +L
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 234/518 (45%), Gaps = 50/518 (9%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P I+ +N ++ K A + +++++ G P T +IN C G ++ +
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
L+ + +RG N +I HG + ++A + D TY LIN LCK
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G+ E A+ L +G+ P + Y +I + CK K A L +M +G P++VT
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y LI+G + G + A+ + +++ + + PD YN+L+ L K G+ AK + + M+
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ + PD Y++L+DG+ + ++AR VF+ +GV +V +N MI G C+ M+D
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 351 EALNLLEEMDYEKIIPNK-----------------------------------VTYSSLI 375
EAL + M+ E ++P+K VTY+SLI
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKIIDKGI 434
+G C G A E EM +R +++TY + + +L K ++K + + ++
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657
Query: 435 QPDMCTYNILLDGLCK--CGRI--------KDAQEVFQDLFKK----GYNLNNWTYNTMI 480
P+ T+N LL G K G++ +F + F + G++ + YN+ +
Sbjct: 658 VPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSAL 717
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
LC G+ A KM G DP++F I+
Sbjct: 718 VCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 223/455 (49%), Gaps = 35/455 (7%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
PD I N+L+ L +L A + +D++ +G +D + L+ G+C G+ E +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
+ G+G P +V YNTII CK+ + +A+ ++ E+ KG P + T+ +I GFC
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 241 VGQLKQAIGLLDEM----------VLKNI-------------------------DPDVVT 265
G + LL E+ L NI PDV T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
YNIL++ L KEGK A L K+G+ P+ ++Y+ L+ YC E + A + MA
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
RG P++ +Y I+I+GL +D+A+N+ ++ + P+ Y+ L+ GLCKTG+
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A L EM R D Y + +D + D+ + ++KG++ D+ +N ++
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
G C+ G + +A + ++ + +TY+T+I+G K+ A+ + ME N C
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ +T+ ++I+ +G+ AE+ +EM RDL+
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 222/475 (46%), Gaps = 17/475 (3%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + +N ++ L K A+ + G+ PN ++ LI +C + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
L + +RG PD +T+ LI GL + G + A+ ++ +G D Y L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G+ A L + R I P +Y T+ID + A ++S + KG+ +VV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
++A+I GFC G L +A+ ++ M +++ PD TY+ ++D K+ + A + M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK-IKMV 349
K KP+VVTY+SL++G+C + A + F M R + PNV +Y +I L K +
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCK--TGKV------------SNAWELLDEMH 395
++A+ E M K +PN+VT++ L+ G K +GKV S E M
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
G YNS L LC V K++ KG PD ++ +L G C G K
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
Query: 456 DAQEV-FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 509
+ + F +L +KG + Y+ ++ + + EA T++ M + +P+
Sbjct: 763 QWRNMDFCNLGEKGLEV-AVRYSQVLEQHLPQPVICEASTILHAMVEKADTKEPV 816
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ ++ NRM + + P ++ ++ VK + +TAI + R ME PN VT
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGK-LHRALQFHDDVLAQ 152
LIN C G A + R P+ +T+ TLI+ L L +A+ + + ++
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 153 GFQLDQVTYATLINGLCK--------------MGQTEAALELLRRIEGRGIKPTVVMYNT 198
++VT+ L+ G K GQ+ E R++ G YN+
Sbjct: 656 KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNS 715
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
+ LC +V A +M+ KG SP+ V+++A+++GFC+VG KQ
Sbjct: 716 ALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 142/383 (37%), Gaps = 85/383 (22%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++DD V+ +++ ++P +N +++ L KT + A L +M I P+
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL--------- 143
LI+ G A V + +++G D + N +IKG C G L AL
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 144 -----QFHDDVLAQGFQLDQ---------------------VTYATLINGLCKMGQTEAA 177
+F + G+ Q VTY +LING C G + A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCK-VKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
E + ++ R + P VV Y T+I SL K + A + M+ PN VT++ L+
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 237 GF-------------------------------------------------CIVGQLKQA 247
GF C+ G +K A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
D+MV K PD V++ ++ G ++ +NM + + V YS +++
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQ 789
Query: 308 YCLVNEVNKARDVFNAMARRGVT 330
+ + +A + +AM + T
Sbjct: 790 HLPQPVICEASTILHAMVEKADT 812
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 233/425 (54%), Gaps = 9/425 (2%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG--FQLDQVTYATLINGLCKMGQTE 175
G P ++TF +LI G++ A++ + + + + D + +I+G CK+G+ E
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 176 AALELLRRIEGRGI-KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
AL G+ P +V Y T++ +LC++ V DL + +G + V YS
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
I+G+ G L A+ EMV K ++ DVV+Y+IL+D L KEG V EA +L MIK+GV
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
+P+++TY++++ G C + ++ +A +FN + G+ + Y +I G+C+ ++ A +
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
+L +M+ I P+ +TY+++I+GLC G+VS A E+ +G D+ITY++ LD+
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
K ++D + + ++ ++ I D+ NILL G +A +++ + + +
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
TY TMI G CK G +EAL + +++ + + + + II AL +KG D A ++L E+
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSS-VSAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 535 IARDL 539
+ L
Sbjct: 543 WEKGL 547
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/614 (25%), Positives = 262/614 (42%), Gaps = 113/614 (18%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEF--NKVLTSLVKTKHYSTAISLSRQMEITGI-TPNFVT 90
+D+ + M + P F + V++ K A+ +G+ PN VT
Sbjct: 150 MDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVT 209
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
L++ C LG+ ++ + G+ D + ++ I G G L AL +++
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
+G D V+Y+ LI+GL K G E AL LL ++ G++P ++ Y II LCK+ +
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
AF L++ +++ GI + Y LI G C G L +A +L +M + I P ++TYN ++
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN--------------- 315
+ L G+V EA + +GV DV+TYS+L+D Y V ++
Sbjct: 390 NGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 316 --------------------KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
+A ++ AM +TP+ +Y MI G CK ++EAL +
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA-------WE------------LLDEMHV 396
E+ + + V Y+ +ID LCK G + A WE LL +H
Sbjct: 505 FNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHA 563
Query: 397 RGQPADII----------------TYNSFLDALCKGHHVDKGIALIKKIIDKGI------ 434
G I+ N + LCK + I + + KG+
Sbjct: 564 NGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS 623
Query: 435 ----------------------------QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
D+ Y I+++GLCK G + A +
Sbjct: 624 TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
+G LN TYN++INGLC++G EAL L +E+ G + +T+ +I L ++G
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 527 AEKLLREMIARDLL 540
AEKLL M+++ L+
Sbjct: 744 AEKLLDSMVSKGLV 757
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 254/537 (47%), Gaps = 42/537 (7%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV++ + +M++ + P +I + ++ L K A L ++ GI +
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ C G AFS+L ++ +RG P +T+NT+I GLC+ G++ A D +++
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSK 406
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D +TY+TL++ K+ +A LE+ RR I +VM N ++ + + A
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
LY M ++P+ TY+ +I G+C GQ+++A+ + +E+ ++ V YN ++DA
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDA 525
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG------------------------- 307
L K+G + A +L + ++G+ D+ T +L+
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVC 585
Query: 308 ----------YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
C A +V+ M R+G+T S I+ + ++ +D L ++
Sbjct: 586 LGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS-TILKTLVDNLRSLDAYLLVVN 644
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
+ + + Y+ +I+GLCK G + A L RG + ITYNS ++ LC+
Sbjct: 645 AGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+ + + L + + G+ P TY IL+D LCK G DA+++ + KG N YN
Sbjct: 705 CLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN 764
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
++++G CK G ++A+ ++S+ D T ++I +KG+ ++A + E
Sbjct: 765 SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEF 821
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 235/517 (45%), Gaps = 29/517 (5%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ S M Q I P I+ +N V+ L S A +S+ G+ + +T +
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYS 416
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L++ + + + + L+ D + N L+K L G A + +
Sbjct: 417 TLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEM 476
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D TYAT+I G CK GQ E ALE+ + + V YN IID+LCK ++ A
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTA 535
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ E+ KG+ ++ T L++ G K +GL+ + N D + N +
Sbjct: 536 TEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL 595
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL-----------MDGYCLVNEVNKARDVF 321
L K G A + +M ++G+ VT+ S +D Y LV VN
Sbjct: 596 LCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRSLDAYLLV--VNAGETTL 650
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
++M +V Y I+I GLCK + +ALNL + N +TY+SLI+GLC+
Sbjct: 651 SSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G + A L D + G +TY +D LCK L+ ++ KG+ P++ Y
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
N ++DG CK G+ +DA V + +T ++MI G CK+G +EAL++ ++ +D
Sbjct: 764 NSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKD 823
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
D F +I KG ++A LLREM+ +
Sbjct: 824 KNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSE 860
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 230/492 (46%), Gaps = 74/492 (15%)
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+T+S L ++LK G+ P + + ++ L K + LQF+ + ++ ++ Y+
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 163 TLINGLCKMGQTEAALELLR-RIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
+ + + E A + + I I P M +++I H F + + +
Sbjct: 66 IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLI----------HGFSITRDDPS 115
Query: 222 KGI------------SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID--------- 260
KG+ P+ +T+ +LIY F G++ AI +L+ M KN++
Sbjct: 116 KGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCS 175
Query: 261 -----------------------------PDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
P++VTY LV AL + GKV E ++++ +
Sbjct: 176 AVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED 235
Query: 292 QGVKPDVVTYSSLMDGY----CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
+G + D V YS+ + GY LV+ + + R+ M +G+ +V SY+I+I GL K
Sbjct: 236 EGFEFDCVFYSNWIHGYFKGGALVDALMQDRE----MVEKGMNRDVVSYSILIDGLSKEG 291
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
V+EAL LL +M E + PN +TY+++I GLCK GK+ A+ L + + G D Y
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 467
+ +D +C+ ++++ +++ + +GIQP + TYN +++GLC GR+ +A EV K
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SK 406
Query: 468 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
G + TY+T+++ K D L + + + D + ++ A G +A
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 528 EKLLREMIARDL 539
+ L R M DL
Sbjct: 467 DALYRAMPEMDL 478
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 164/353 (46%), Gaps = 39/353 (11%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVT------LNILINCHCYLGQTTSAFS 109
N + L K + AI + M G+T F + ++ L + YL + +
Sbjct: 589 LNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGET 648
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
L+++ D I + +I GLC G L +AL ++G L+ +TY +LINGLC
Sbjct: 649 TLSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC 701
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
+ G AL L +E G+ P+ V Y +ID+LCK L A L M++KG+ PN++
Sbjct: 702 QQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
Y++++ G+C +GQ + A+ ++ ++ + PD T + ++ K+G + EA ++
Sbjct: 762 IYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEF 821
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ + D + L+ G+C + +AR GL + +V
Sbjct: 822 KDKNISADFFGFLFLIKGFCTKGRMEEAR-----------------------GLLREMLV 858
Query: 350 DEA-LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
E+ + L+ +D E + + + LC+ G+V A ++LDE+ P+
Sbjct: 859 SESVVKLINRVDAE--LAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPS 909
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 7/248 (2%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
+I++ ++ L K A++L + G+T N +T N LIN C G A +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
++ G P +T+ LI LC G A + D ++++G + + Y ++++G CK+G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 173 QTEAALELL-RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
QTE A+ ++ R++ GR + P +++I CK + A +++E K IS + +
Sbjct: 775 QTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
LI GFC G++++A GLL EM+ + VV VDA E + + L + +
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREML---VSESVVKLINRVDAELAESE--SIRGFLVELCE 888
Query: 292 QGVKPDVV 299
QG P +
Sbjct: 889 QGRVPQAI 896
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 260/574 (45%), Gaps = 73/574 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + FN + + + + + ++++ + Y A+++ ++ME G P +T N+
Sbjct: 189 VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNV 248
Query: 94 LINCHCYLGQTTSAFSVLANILKR-GYHPDTITFNTLIKGLCLHGKLHR-ALQFHDDVLA 151
++N +G + + L +K G PD T+NTLI C G LH+ A Q +++ A
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKA 307
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
GF D+VTY L++ K + + A+++L + G P++V YN++I + + ++
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM----------------- 254
A +L ++M KG P+V TY+ L+ GF G+++ A+ + +EM
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 255 ----------VLKNID--------PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
++K D PD+VT+N L+ G+ G E + M + G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+ T+++L+ Y +A V+ M GVTP++ +YN ++ L + M +++ +L
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVS------------------------------- 385
EM+ + PN++TY SL+ ++
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 386 ----NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
A E+ RG DI T NS + + V K ++ + ++G P M TY
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
N L+ + ++E+ +++ KG + +YNT+I C+ +A + S+M +
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+G + D IT+ T I + ++A ++R MI
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 204/391 (52%), Gaps = 3/391 (0%)
Query: 129 LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG 188
+I L G++ A + + GF LD +Y +LI+ G+ A+ + +++E G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAF-DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ- 246
KPT++ YN I++ K+ + L +M + GI+P+ TY+ LI C G L Q
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQE 297
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
A + +EM D VTYN L+D GK + +EA +L M+ G P +VTY+SL+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
Y +++A ++ N MA +G P+V +Y ++ G + V+ A+++ EEM P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
N T+++ I GK + ++ DE++V G DI+T+N+ L + + +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
K++ G P+ T+N L+ +CG + A V++ + G + TYNT++ L +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISA 517
G+++++ ++++MED C + +T+ +++ A
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 236/532 (44%), Gaps = 35/532 (6%)
Query: 38 VSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
S +M I P +N ++T + + A + +M+ G + + VT N L++
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
+ + A VL ++ G+ P +T+N+LI G L A++ + + +G + D
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTV------------------------ 193
TY TL++G + G+ E+A+ + + G KP +
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 194 -----------VMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVG 242
V +NT++ + + S ++ EM G P T++ LI + G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+QA+ + M+ + PD+ TYN ++ AL + G +++ +LA M KP+ +TY
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
SL+ Y E+ + + + P ++ K ++ EA E+
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
P+ T +S++ + V+ A +LD M RG + TYNS + + K
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
++++I+ KGI+PD+ +YN ++ C+ R++DA +F ++ G + TYNT I
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+ +F+EA+ ++ M +GC + T+ +I+ + D+A+ + ++
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 192/382 (50%), Gaps = 1/382 (0%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
G+ +SA ++ + + G+ D ++ +LI G+ A+ + G + +TY
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 162 ATLINGLCKMGQTEAAL-ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
++N KMG + L+ +++ GI P YNT+I + L A ++ EM
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
A G S + VTY+AL+ + + K+A+ +L+EMVL P +VTYN L+ A ++G +
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA + M ++G KPDV TY++L+ G+ +V A +F M G PN+ ++N I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
E + + +E++ + P+ VT+++L+ + G S + EM G
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ T+N+ + A + ++ + + ++++D G+ PD+ TYN +L L + G + +++V
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 461 FQDLFKKGYNLNNWTYNTMING 482
++ N TY ++++
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHA 568
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 220/501 (43%), Gaps = 75/501 (14%)
Query: 74 SLSRQMEITGITPNFV-TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKG 132
+L + G++P L LI + GQ S S L K + +KG
Sbjct: 85 NLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKG 144
Query: 133 LCLHGKLHRALQFHDDVLAQ-GFQ--LDQVTYATLINGLCKMGQTEAALELLRRIEGRGI 189
L H K AL+ D + Q +Q LD A +I+ L K EGR
Sbjct: 145 LGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGK--------------EGR-- 188
Query: 190 KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIG 249
VS A ++++ + G S +V +Y++LI F G+ ++A+
Sbjct: 189 -------------------VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 250 LLDEMVLKNIDPDVVTYNILVDALGKEGKV------------------------------ 279
+ +M P ++TYN++++ GK G
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 280 ------REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+EA + M G D VTY++L+D Y + +A V N M G +P++
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+YN +I + M+DEA+ L +M + P+ TY++L+ G + GKV +A + +E
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M G +I T+N+F+ + + + +I G+ PD+ T+N LL + G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
+ VF+++ + G+ T+NT+I+ + G F++A+T+ +M D G D T+ T
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 514 IISALFEKGENDKAEKLLREM 534
+++AL G +++EK+L EM
Sbjct: 530 VLAALARGGMWEQSEKVLAEM 550
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 187/431 (43%), Gaps = 35/431 (8%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ + N+M + P + + +L+ + +A+S+ +M G PN T N
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
I + G+ T + I G PD +T+NTL+ +G ++ G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
F ++ T+ TLI+ + G E A+ + RR+ G+ P + YNT++ +L + + +
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFC---------------IVGQLKQAIGLLDEMVL-- 256
+ +EM PN +TY +L++ + G ++ LL +VL
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 257 ------------------KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
+ PD+ T N +V G+ V +A +L M ++G P +
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TY+SLM + + K+ ++ + +G+ P++ SYN +IY C+ + +A + E
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M I+P+ +TY++ I A ++ M G + TYNS +D CK +
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 419 VDKGIALIKKI 429
D+ ++ +
Sbjct: 785 KDEAKLFVEDL 795
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 207/402 (51%)
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
++ RG PD + L + G + + D++ + G + + Y I LC+ +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
E A ++ ++ G+ P + Y+ +ID CK V A+ LY E++ + PNVV +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
L+ GFC +L A L MV +DP++ YN L+ K G + EA +L+ M
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+ PDV TY+ L++G C+ ++V +A +F M + P+ +YN +I+G CK +++AL
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
+L EM + PN +T+S+LIDG C + A L EM ++G D++TY + +DA
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
K ++ + + L +++ GI P+ T+ L+DG K GR+ A + +Q+ ++ N+
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
+ +I GLC+ G A S M G D ++ +++
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 208/414 (50%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
PD+ +++ GL + + ++++G D Y L K G +L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
L + GIKP V +Y I LC+ + A ++ M G+ PN+ TYSA+I G+C
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
G ++QA GL E+++ + P+VV + LVD K ++ A+++ M+K GV P++
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
Y+ L+ G+C + +A + + M ++P+V +Y I+I GLC V EA L ++M
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
E+I P+ TY+SLI G CK + A +L EM G +IIT+++ +D C +
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ L ++ KGI PD+ TY L+D K +K+A ++ D+ + G + N+ T+ ++
Sbjct: 462 AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+G KEG A+ + + + F +I L + G +A + +M
Sbjct: 522 DGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 216/458 (47%)
Query: 46 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTT 105
+M+ +P +L LV+ + + + + M G+ P+ +L C G +
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 106 SAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLI 165
+L + G P+ + I LC K+ A + + + G + TY+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
+G CK G A L + I + P VV++ T++D CK + + A L+ M+ G+
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
PN+ Y+ LI+G C G + +A+GLL EM N+ PDV TY IL++ L E +V EA +
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
M + + P TY+SL+ GYC + +A D+ + M GV PN+ +++ +I G C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
++ + A+ L EM + I+P+ VTY++LID K + A L +M G + T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
+ +D K + I ++ + + + L++GLC+ G I A F D+
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
G + +Y +M+ G +E + + L M G
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 216/455 (47%), Gaps = 7/455 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
+ M+ + P + + + K YS L +M GI PN I I C
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+ A + + K G P+ T++ +I G C G + +A + ++L + V
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ TL++G CK + A L + G+ P + +YN +I CK + A L SEM
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+ +SP+V TY+ LI G CI Q+ +A L +M + I P TYN L+ KE +
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+A ++ + M GV+P+++T+S+L+DGYC V ++ A ++ M +G+ P+V +Y +I
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
K + EAL L +M I PN T++ L+DG K G++S A + E + +
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC 546
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ + + ++ LC+ ++ + + GI PD+C+Y +L G + RI D +
Sbjct: 547 WNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMML 606
Query: 461 FQDLFKKGYNLNNWTYNTMI------NGLCKEGLF 489
D+ K G L N N ++ NG K F
Sbjct: 607 QCDMIKTGI-LPNLLVNQLLARFYQANGYVKSACF 640
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 201/428 (46%), Gaps = 43/428 (10%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ F M + + P + ++ ++ KT + A L +++ + + PN V
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ C + +A S+ +++K G P+ +N LI G C G + A+ ++ +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D TY LINGLC Q A L ++++ I P+ YN++I CK + A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
DL SEM A G+ PN++T+S LI G+C V +K A+GL EM +K I PDVVTY L+DA
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
KE ++EA + + M++ G+ P+ T++ L+DG+ ++ A D +
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY------------ 537
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+E + ++ N V ++ LI+GLC+ G + A +
Sbjct: 538 -----------------------QENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIA----LIKKIIDKGIQPDMCTYNILLDGLC 449
M G DI +Y S L KGH +K I L +I GI P++ +L
Sbjct: 575 MRSCGITPDICSYVSML----KGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQ 630
Query: 450 KCGRIKDA 457
G +K A
Sbjct: 631 ANGYVKSA 638
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 215/459 (46%), Gaps = 48/459 (10%)
Query: 107 AFSVLANILKRGYHPDTIT---FNTLIKGLCLHGK----LHRALQFHDDVLAQGFQLDQV 159
+FS + ++L G H T+ +LI+ L H + HR +D+ + F +
Sbjct: 77 SFSAVIHVLT-GAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIG-- 133
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
++ LI +MG E AL + R ++ P +I++ L + + + Y M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
I++G+ P+V Y L G + LLDEM I P+V Y I + L ++ K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK----------------------- 316
EA+ M +M K GV P++ TYS+++DGYC V +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 317 ------------ARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
AR +F M + GV PN+ YN +I+G CK + EA+ LL EM+ +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
P+ TY+ LI+GLC +V+ A L +M TYNS + CK +++++ +
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
L ++ G++P++ T++ L+DG C IK A ++ ++ KG + TY +I+
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
KE EAL L S M + G + TF ++ +++G
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 164/335 (48%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV + +L + P ++ F ++ K + TA SL M G+ PN N
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ HC G A +L+ + PD T+ LI GLC+ ++ A + + +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
TY +LI+G CK E AL+L + G++P ++ ++T+ID C V+ + A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
LY EM KGI P+VVTY+ALI +K+A+ L +M+ I P+ T+ LVD
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
KEG++ A + +Q + V ++ L++G C + +A F+ M G+TP+
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
+ SY M+ G + K + + + L +M I+PN
Sbjct: 584 ICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 147/310 (47%), Gaps = 3/310 (0%)
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
++ +S LI F +G ++A+ + EM PD +++ L + +
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDY 187
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
+MI +G+ PDV Y L +K + + M G+ PNV Y I I LC+
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
++EA + E M ++PN TYS++IDG CKTG V A+ L E+ V +++ +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
+ +D CK + +L ++ G+ P++ YN L+ G CK G + +A + ++
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
+ + +TY +INGLC E EA L KM++ T+ ++I ++ ++
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 527 AEKLLREMIA 536
A L EM A
Sbjct: 428 ALDLCSEMTA 437
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ + + M + P II F+ ++ + A+ L +M I GI P+ VT
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ H A + +++L+ G HP+ TF L+ G G+L A+ F+ + Q
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ V + LI GLC+ G A + GI P + Y +++ + K ++
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID 260
L +MI GI PN++ L + G +K A L + LK +
Sbjct: 604 MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTVS 651
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 257/519 (49%), Gaps = 18/519 (3%)
Query: 34 VDDTVSFFNRMLQMR-ITPP-IIEFNKVLTSLVKTKHYSTA--ISLSRQMEITGITPNFV 89
VDD + MLQ + PP I + VL + K + + I+L + G++PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
L I+ C + +A+ +L++++K + FN L+ L + + R +D V
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR---MNDLV 317
Query: 150 LAQG---FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG------IKPTVVMYNTII 200
L + D VT LIN LCK + + ALE+ ++ G+ IK + +NT+I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLI 377
Query: 201 DSLCKVKLVSHAFDLYSEM-IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
D LCKV + A +L M + + +PN VTY+ LI G+C G+L+ A ++ M I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
P+VVT N +V + + + A M K+GVK +VVTY +L+ C V+ V KA
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+ M G +P+ + Y +I GLC+++ +A+ ++E++ + + Y+ LI C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
+E+L +M G+ D ITYN+ + K + +++++ + G+ P +
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDL-FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TY ++D C G + +A ++F+D+ N N YN +IN K G F +AL+L +
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
M+ + T+ + L EK + + KL+ EM+ +
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 214/471 (45%), Gaps = 55/471 (11%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFS 109
PP FN +L+ L + S L +M+ I P+ VTL ILIN C + A
Sbjct: 294 APP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 110 VLANILKRGYH--------PDTITFNTLIKGLCLHGKLHRALQFHDDV-LAQGFQLDQVT 160
V + RG D+I FNTLI GLC G+L A + + L + + VT
Sbjct: 351 VFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVT 408
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK--------------- 205
Y LI+G C+ G+ E A E++ R++ IKP VV NTI+ +C+
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 206 --------------------VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
V V A Y +M+ G SP+ Y ALI G C V +
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
AI +++++ D++ YN+L+ + + ML M K+G KPD +TY++L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD-YEKI 364
+ + + M G+ P V +Y +I C + +DEAL L ++M + K+
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
PN V Y+ LI+ K G A L +EM ++ ++ TYN+ L + + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
L+ +++++ +P+ T IL++ L + ++ F +GY++ + T
Sbjct: 709 LMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK-----FMQGYSVASPT 754
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 190/388 (48%), Gaps = 8/388 (2%)
Query: 34 VDDTVSFFNRMLQMR------ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITP 86
VD+ + F +M R I I FN ++ L K A L +M++ P
Sbjct: 345 VDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAP 404
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N VT N LI+ +C G+ +A V++ + + P+ +T NT++ G+C H L+ A+ F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
D+ +G + + VTY TLI+ C + E A+ ++ G P +Y +I LC+V
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
+ A + ++ G S +++ Y+ LI FC ++ +L +M + PD +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA- 325
N L+ GK + M+ M + G+ P V TY +++D YC V E+++A +F M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
V PN YNI+I K+ +AL+L EEM + + PN TY++L L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDAL 413
+L+DEM + + IT ++ L
Sbjct: 705 TLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 205/476 (43%), Gaps = 85/476 (17%)
Query: 141 RALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTII 200
+ L+ ++ + L V LI +MG ++ + R++ +K + V N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDS-NMKNSQV-RNVVV 192
Query: 201 DSLCKVKLVSHAFDLYSEMIAK-------------------------------------- 222
D L + LV AF + EM+ K
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSS 252
Query: 223 -GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP-DVVTYNILVDALGKEGKVR 280
G+SPN V + I C + A +L ++ +KN P + +N L+ LG+ +
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANAAWDILSDL-MKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARRGVTPNVQS---- 335
+++ M + ++PDVVT L++ C V++A +VF M +R NV
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 336 -YNIMIYGLCKIKMVDEALNLLEEMDY-EKIIPNKVTYSSLIDGLCKTGKVSNAWELLD- 392
+N +I GLCK+ + EA LL M E+ PN VTY+ LIDG C+ GK+ A E++
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 393 ----------------------------------EMHVRGQPADIITYNSFLDALCKGHH 418
+M G +++TY + + A C +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
V+K + +K+++ G PD Y L+ GLC+ R DA V + L + G++L+ YN
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+I C + ++ +++ ME G D IT+ T+IS + + + E+++ +M
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 36/337 (10%)
Query: 42 NRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYL 101
+RM + I P ++ N ++ + + + A+ ME G+ N VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
A +L+ G PD + LI GLC + H A++ + + GF LD + Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNT----------------------- 198
LI C TE E+L +E G KP + YNT
Sbjct: 550 NMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 199 ------------IIDSLCKVKLVSHAFDLYSEM-IAKGISPNVVTYSALIYGFCIVGQLK 245
+ID+ C V + A L+ +M + ++PN V Y+ LI F +G
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
QA+ L +EM +K + P+V TYN L L ++ + ++ M++Q +P+ +T LM
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ +E+ K R + T +++ G
Sbjct: 730 ERLSGSDELVKLRKFMQGYSVASPTEKASPFDVFSLG 766
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV+ + ++ +ML+ +P + +++ L + + AI + +++ G + + + N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI C T + +L ++ K G PD+IT+NTLI H + + +
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIE-GRGIKPTVVMYNTIIDSLCKVKLVSH 211
G TY +I+ C +G+ + AL+L + + + P V+YN +I++ K+
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A L EM K + PNV TY+AL Q + + L+DEMV ++ +P+ +T IL++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR--DVFN 322
L ++V M GY + + KA DVF+
Sbjct: 731 RLSGSD-------------------ELVKLRKFMQGYSVASPTEKASPFDVFS 764
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 220/429 (51%)
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
C G+ T A ++ + + P + + L++GL +L +A+ ++ G D
Sbjct: 115 CSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDT 174
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+TY +I LCK G AL LL + G P V+ YNT+I + A + +
Sbjct: 175 ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD 234
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
+ G P ++TY+ L+ C +AI +L++M ++ PD+VTYN LV+ + G
Sbjct: 235 QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGN 294
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+ E +++ ++ G++ + VTY++L+ C ++ ++ N M + P V +YNI
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I GLCK +++ A++ +M +K +P+ VTY++++ + K G V +A ELL +
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
P +ITYNS +D L K + K + L +++D GI PD T L+ G C+ +++A
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+V ++ +G + TY +I GLCK+ + A+ ++ M GC D + I+ +
Sbjct: 475 QVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Query: 519 FEKGENDKA 527
E G +A
Sbjct: 535 EEMGMGSEA 543
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 218/437 (49%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N++L +L + A L M P+F + + L+ + Q A +L ++
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
G PDTIT+N +I LC G + AL +D+ G D +TY T+I + G E
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
A+ + G P ++ Y +++ +C+ + A ++ +M +G P++VTY++L+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
C G L++ ++ ++ ++ + VTYN L+ +L E + +L +M + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
V+TY+ L++G C +++A D F M + P++ +YN ++ + K MVD+A+ LL
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+ P +TY+S+IDGL K G + A EL +M G D IT S + C+
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+ V++ ++K+ ++G TY +++ GLCK I+ A EV + + G + Y
Sbjct: 468 NLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Query: 477 NTMINGLCKEGLFDEAL 493
++ G+ + G+ EA+
Sbjct: 528 TAIVKGVEEMGMGSEAV 544
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 189/380 (49%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + M+ P I +N ++ +L K H TA+ L M ++G P+ +T N
Sbjct: 155 LDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNT 214
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I C G A + L+ G P IT+ L++ +C + RA++ +D+ +G
Sbjct: 215 VIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D VTY +L+N C+ G E +++ I G++ V YNT++ SLC +
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVE 334
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++ + M P V+TY+ LI G C L +AI +M+ + PD+VTYN ++ A+
Sbjct: 335 EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM 394
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
KEG V +A +L ++ P ++TY+S++DG + KA ++++ M G+ P+
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+ +IYG C+ +V+EA +L+E TY +I GLCK ++ A E+++
Sbjct: 455 ITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Query: 394 MHVRGQPADIITYNSFLDAL 413
M G D Y + + +
Sbjct: 515 MLTGGCKPDETIYTAIVKGV 534
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 203/422 (48%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D M + P + ++ L + A+ + R M ++G P+ +T N++I
Sbjct: 122 DACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMII 181
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
C G +A +L ++ G PD IT+NT+I+ + +G +A++F D L G
Sbjct: 182 GNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCP 241
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+TY L+ +C+ + A+E+L + G P +V YN++++ C+ + +
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV 301
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+++ G+ N VTY+ L++ C + +L+ M + P V+TYNIL++ L K
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK 361
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+ A + M++Q PD+VTY++++ V+ A ++ + P + +
Sbjct: 362 ARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLIT 421
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
YN +I GL K ++ +AL L +M I P+ +T SLI G C+ V A ++L E
Sbjct: 422 YNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETS 481
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
RG TY + LCK ++ I +++ ++ G +PD Y ++ G+ + G
Sbjct: 482 NRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGS 541
Query: 456 DA 457
+A
Sbjct: 542 EA 543
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 187/381 (49%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D+ T +++ LC G+ A +L+ + P + ++ L ++ + A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
M+ G P+ +TY+ +I C G ++ A+ LL++M L PDV+TYN ++ +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
G +A ++ G P ++TY+ L++ C +A +V MA G P++ +Y
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
N ++ C+ ++E ++++ + + N VTY++L+ LC E+L+ M+
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
+ITYN ++ LCK + + I +++++ PD+ TYN +L + K G + D
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
A E+ L TYN++I+GL K+GL +AL L +M D G D IT ++I
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 517 ALFEKGENDKAEKLLREMIAR 537
++A ++L+E R
Sbjct: 463 GFCRANLVEEAGQVLKETSNR 483
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 150/321 (46%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N + + F+ LQ P +I + ++ + + + AI + M + G P+ VT N
Sbjct: 224 NAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYN 283
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L+N +C G SV+ +IL G +T+T+NTL+ LC H + + +
Sbjct: 284 SLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQT 343
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ +TY LINGLCK A++ ++ + P +V YNT++ ++ K +V A
Sbjct: 344 SYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDA 403
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L + P ++TY+++I G G +K+A+ L +M+ I PD +T L+
Sbjct: 404 IELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG 463
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ V EA +L +G TY ++ G C E+ A +V M G P+
Sbjct: 464 FCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Query: 333 VQSYNIMIYGLCKIKMVDEAL 353
Y ++ G+ ++ M EA+
Sbjct: 524 ETIYTAIVKGVEEMGMGSEAV 544
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 255/517 (49%), Gaps = 18/517 (3%)
Query: 34 VDDTVSFFNRMLQMR-ITPP-IIEFNKVLTSLVKTKHYSTA--ISLSRQMEITGITPNFV 89
VDD + MLQ + PP I + VL + K + + I+L + G++PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
L I+ C + +A+ +L++++K + FN L+ L + + R +D V
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR---MNDLV 317
Query: 150 LAQG---FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG------IKPTVVMYNTII 200
L + D VT LIN LCK + + ALE+ ++ G+ IK + +NT+I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 201 DSLCKVKLVSHAFDLYSEM-IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
D LCKV + A +L M + + PN VTY+ LI G+C G+L+ A ++ M I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
P+VVT N +V + + + A M K+GVK +VVTY +L+ C V+ V KA
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+ M G +P+ + Y +I GLC+++ +A+ ++E++ + + Y+ LI C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
+E+L +M G+ D ITYN+ + K + +++++ + G+ P +
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDL-FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TY ++D C G + +A ++F+D+ N N YN +IN K G F +AL+L +
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
M+ + T+ + L EK + + KL+ EM+
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 206/476 (43%), Gaps = 85/476 (17%)
Query: 141 RALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTII 200
+ L+ ++ + L V LI +MG ++ + R++ +K + V N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDS-NMKNSQV-RNVVV 192
Query: 201 DSLCKVKLVSHAFDLYSEMIAK-------------------------------------- 222
D L + LV AF + EM+ K
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSS 252
Query: 223 -GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP-DVVTYNILVDALGKEGKVR 280
G+SPN V + I C + A +L ++ +KN P + +N L+ LG+ +
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDL-MKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARRGVTPNVQS---- 335
+++ M + ++PDVVT L++ C V++A +VF M +R NV
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 336 -YNIMIYGLCKIKMVDEALNLLEEMDY-EKIIPNKVTYSSLIDGLCKTGKVSNAWELLD- 392
+N +I GLCK+ + EA LL M E+ +PN VTY+ LIDG C+ GK+ A E++
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 393 ----------------------------------EMHVRGQPADIITYNSFLDALCKGHH 418
+M G +++TY + + A C +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
V+K + +K+++ G PD Y L+ GLC+ R DA V + L + G++L+ YN
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+I C + ++ +++ ME G D IT+ T+IS + + + E+++ +M
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV+ + ++ +ML+ +P + +++ L + + AI + +++ G + + + N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI C + +L ++ K G PD+IT+NTLI H + + +
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIE-GRGIKPTVVMYNTIIDSLCKVKLVSH 211
G TY +I+ C +G+ + AL+L + + + P V+YN +I++ K+
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
A L EM K + PNV TY+AL Q + + L+DEMV
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 256/519 (49%), Gaps = 18/519 (3%)
Query: 34 VDDTVSFFNRMLQMR-ITPP-IIEFNKVLTSLVKTKHYSTA--ISLSRQMEITGITPNFV 89
VDD + MLQ + PP I + VL + K + + I+L + G++PN V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
L I+ C + +A+ +L++++K + FN L+ L + + R +D V
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR---MNDLV 317
Query: 150 LAQG---FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG------IKPTVVMYNTII 200
L + D VT LIN LCK + + ALE+ ++ G+ IK + +NT+I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 201 DSLCKVKLVSHAFDLYSEM-IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
D LCKV + A +L M + + PN VTY+ LI G+C G+L+ A ++ M I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
P+VVT N +V + + + A M K+GVK +VVTY +L+ C V+ V KA
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+ M G +P+ + Y +I GLC+++ +A+ ++E++ + + Y+ LI C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
+E+L +M G+ D ITYN+ + K + +++++ + G+ P +
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDL-FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TY ++D C G + +A ++F+D+ N N YN +IN K G F +AL+L +
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
M+ + T+ + L EK + + KL+ EM+ +
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 213/441 (48%), Gaps = 13/441 (2%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM------EITGITPNFVTLNILIN 96
+M +++I P ++ ++ +L K++ A+ + QM + I + + N LI+
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 97 CHCYLGQTTSAFSVLANI-LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
C +G+ A +L + L+ P+ +T+N LI G C GKL A + + +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ VT T++ G+C+ A+ +E G+K VV Y T+I + C V V A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
Y +M+ G SP+ Y ALI G C V + AI +++++ D++ YN+L+
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+ + ML M K+G KPD +TY++L+ + + + M G+ P V +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMD-YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
Y +I C + +DEAL L ++M + K+ PN V Y+ LI+ K G A L +EM
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
++ ++ TYN+ L + + + L+ +++++ +P+ T IL++ L +
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Query: 455 KDAQEVFQDLFKKGYNLNNWT 475
++ F +GY++ + T
Sbjct: 739 VKLRK-----FMQGYSVASPT 754
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 190/388 (48%), Gaps = 8/388 (2%)
Query: 34 VDDTVSFFNRMLQMR------ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITP 86
VD+ + F +M R I I FN ++ L K A L +M++ P
Sbjct: 345 VDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP 404
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N VT N LI+ +C G+ +A V++ + + P+ +T NT++ G+C H L+ A+ F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
D+ +G + + VTY TLI+ C + E A+ ++ G P +Y +I LC+V
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
+ A + ++ G S +++ Y+ LI FC ++ +L +M + PD +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA- 325
N L+ GK + M+ M + G+ P V TY +++D YC V E+++A +F M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
V PN YNI+I K+ +AL+L EEM + + PN TY++L L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDAL 413
+L+DEM + + IT ++ L
Sbjct: 705 TLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 206/476 (43%), Gaps = 85/476 (17%)
Query: 141 RALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTII 200
+ L+ ++ + L V LI +MG ++ + R++ +K + V N ++
Sbjct: 135 KLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDS-NMKNSQV-RNVVV 192
Query: 201 DSLCKVKLVSHAFDLYSEMIAK-------------------------------------- 222
D L + LV AF + EM+ K
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSS 252
Query: 223 -GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP-DVVTYNILVDALGKEGKVR 280
G+SPN V + I C + A +L ++ +KN P + +N L+ LG+ +
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDL-MKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARRGVTPNVQS---- 335
+++ M + ++PDVVT L++ C V++A +VF M +R NV
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 336 -YNIMIYGLCKIKMVDEALNLLEEMDY-EKIIPNKVTYSSLIDGLCKTGKVSNAWELLD- 392
+N +I GLCK+ + EA LL M E+ +PN VTY+ LIDG C+ GK+ A E++
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 393 ----------------------------------EMHVRGQPADIITYNSFLDALCKGHH 418
+M G +++TY + + A C +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
V+K + +K+++ G PD Y L+ GLC+ R DA V + L + G++L+ YN
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+I C + ++ +++ ME G D IT+ T+IS + + + E+++ +M
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 141/337 (41%), Gaps = 36/337 (10%)
Query: 42 NRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYL 101
+RM + I P ++ N ++ + + + A+ ME G+ N VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
A +L+ G PD + LI GLC + H A++ + + GF LD + Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNT----------------------- 198
LI C E E+L +E G KP + YNT
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 199 ------------IIDSLCKVKLVSHAFDLYSEM-IAKGISPNVVTYSALIYGFCIVGQLK 245
+ID+ C V + A L+ +M + ++PN V Y+ LI F +G
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
QA+ L +EM +K + P+V TYN L L ++ + ++ M++Q +P+ +T LM
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ +E+ K R + T +++ G
Sbjct: 730 ERLSGSDELVKLRKFMQGYSVASPTEKASPFDVFSLG 766
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 22/293 (7%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV+ + ++ +ML+ +P + +++ L + + AI + +++ G + + + N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI C + +L ++ K G PD+IT+NTLI H + + +
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIE-GRGIKPTVVMYNTIIDSLCKVKLVSH 211
G TY +I+ C +G+ + AL+L + + + P V+YN +I++ K+
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A L EM K + PNV TY+AL Q + + L+DEMV ++ +P+ +T IL++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR--DVFN 322
L ++V M GY + + KA DVF+
Sbjct: 731 RLSGSD-------------------ELVKLRKFMQGYSVASPTEKASPFDVFS 764
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 243/538 (45%), Gaps = 51/538 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ V FN+ML+ R + + +L + ++S A L ++ T I+ + V N
Sbjct: 341 NIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYN 400
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+ + LG+ A + + +G PD I + TLI G CL GK A ++
Sbjct: 401 VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D V Y L GL G + A E L+ +E RG+KPT V +N +I+ L + A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI------------------------ 248
Y + K + ++++ GFC G L A
Sbjct: 521 EAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCA 576
Query: 249 ---------GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
LLD M ++P+ Y L+ A + VR+A+ +++ + + PD+
Sbjct: 577 EKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLF 636
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
TY+ +++ YC +NE +A +F M RR V P+V +Y++++ D L++ EM
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREM 689
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 419
+ +IP+ V Y+ +I+ C + + L +M R D++TY L +
Sbjct: 690 EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKP 744
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
++ ++ K D ++PD+ Y +L+D CK G + +A+ +F + + G + + Y +
Sbjct: 745 ERNLSREMKAFD--VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
I CK G EA + +M ++G D + + +I+ G KA KL++EM+ +
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 218/465 (46%), Gaps = 43/465 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
V++ + F M I P +I + ++ S A L +M+ TG TP+ V N
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH------ 146
+L G AF L + RG P +T N +I+GL G+L +A F+
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 147 ----DDVLAQGF------------------QLDQVTYATLINGLC-KMGQTEAALELLRR 183
D + +GF L + Y TL LC + A +LL R
Sbjct: 531 SRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
+ G++P MY +I + C+V V A + + ++ K I P++ TY+ +I +C + +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
KQA L ++M +++ PDVVTY++L+++ + RE + V PDVV Y+
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF-------DVIPDVVYYTI 703
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
+++ YC +N++ K +F M RR + P+V +Y +++ NL EM
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKAFD 756
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
+ P+ Y+ LID CK G + A + D+M G D Y + + CK ++ +
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
+ ++I+ G++PD+ Y L+ G C+ G + A ++ +++ +KG
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/534 (23%), Positives = 230/534 (43%), Gaps = 40/534 (7%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
FF + P I N +++ ++ + + ++E G+ + T +++
Sbjct: 169 FFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALW 228
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ- 158
+L+ +L + + I+GLCL+ A + +D+
Sbjct: 229 RNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKS 288
Query: 159 ---VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ Y ++ GLC + E A ++ +E GI P V +Y+ II+ K + A D+
Sbjct: 289 DLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDV 348
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+++M+ K N V S+++ +C +G +A L E NI D V YN+ DALGK
Sbjct: 349 FNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGK 408
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
GKV EA + M +G+ PDV+ Y++L+ G CL + + A D+ M G TP++
Sbjct: 409 LGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVI 468
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
YN++ GL + EA L+ M+ + P VT++ +I+GL G++ A + +
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 396 VRGQPADIITYNSFLDALCKGH-----------------------------HVDKGIALI 426
+ + D F A C H ++ K L+
Sbjct: 529 HKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLL 588
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
++ G++P+ Y L+ C+ ++ A+E F+ L K + +TY MIN C+
Sbjct: 589 DRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRL 648
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+A L M+ D +T+ ++++ D + REM A D++
Sbjct: 649 NEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVI 695
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 159/335 (47%), Gaps = 15/335 (4%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHY-STAISLSRQMEITGITPNFVTLNILINCHC 99
F R +++ P + + TSL K Y S A L +M G+ P LI C
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
+ A ++ + PD T+ +I C + +A +D+ + + D V
Sbjct: 612 RVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVV 671
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY+ L+N ++ L++ R +E + P VV Y +I+ C + + + L+ +M
Sbjct: 672 TYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ I P+VVTY+ L+ + K L EM ++ PDV Y +L+D K G +
Sbjct: 725 KRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
EAK + MI+ GV PD Y++L+ C + + +A+ +F+ M GV P+V Y +
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
I G C+ V +A+ L++EM + I P K + S++
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 14/308 (4%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+RM ++ + P + K++ + + + A + I P+ T I+IN +C
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
L + A+++ ++ +R PD +T++ L+ L ++ A D V
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVV 699
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y +IN C + + L + ++ R I P VV Y ++ + +L EM
Sbjct: 700 YYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREM 752
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
A + P+V Y+ LI C +G L +A + D+M+ +DPD Y L+ K G +
Sbjct: 753 KAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYL 812
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+EAK + MI+ GVKPDVV Y++L+ G C V KA + M +G+ P S + +
Sbjct: 813 KEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Query: 340 IYGLCKIK 347
Y K K
Sbjct: 873 HYAKLKAK 880
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 174/454 (38%), Gaps = 96/454 (21%)
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL---------------------------- 208
AL L+RIEG P+V Y T+I +C L
Sbjct: 74 ALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLK 133
Query: 209 --------------VSHA-------FDLYSEMI--------AKGISPNVVTYSALIYGFC 239
VS A D++ E I + G +P++ + LI
Sbjct: 134 AIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMI 193
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA-VMIKQGVKPDV 298
G+ +G E+ +D D TY ++V AL + E + +L+ ++I + P V
Sbjct: 194 ASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCV 253
Query: 299 --------------------------------------VTYSSLMDGYCLVNEVNKARDV 320
+ Y ++ G C + A V
Sbjct: 254 FYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESV 313
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
M + G+ P+V Y+ +I G K + +A+++ +M ++ N V SS++ C+
Sbjct: 314 VLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ 373
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCT 440
G S A++L E D + YN DAL K V++ I L +++ KGI PD+
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
Y L+ G C G+ DA ++ ++ G + YN + GL GL EA + ME
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+ G +T +I L + GE DKAE +
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 210/407 (51%), Gaps = 4/407 (0%)
Query: 71 TAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLI 130
A+ L ++M +G+ P +T N L+N C G A ++ + + G P+ +++NTLI
Sbjct: 139 AALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLI 198
Query: 131 KGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG----QTEAALELLRRIEG 186
KGLC + +AL + + G + ++VT +++ LC+ G + LE +
Sbjct: 199 KGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
+V+ ++DS K V A +++ EM K + + V Y+ +I G C G +
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVA 318
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
A G + +MV + ++PDV TYN L+ AL KEGK EA ++ M GV PD ++Y ++
Sbjct: 319 AYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQ 378
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
G C+ +VN+A + +M + + P V +N++I G + AL++L M + P
Sbjct: 379 GLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
N T ++LI G K G++ +AW + +EM D TYN L A C H+ L
Sbjct: 439 NVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLY 498
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
+++ +G QPD+ TY L+ GLC GR+K A+ + + G +++
Sbjct: 499 DEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDH 545
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 202/414 (48%), Gaps = 4/414 (0%)
Query: 127 NTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEG 186
+++++ LCL GKL AL ++ G +T+ L+NGLCK G E A L+R +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
G P V YNT+I LC V V A L++ M GI PN VT + +++ C G +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 247 AIGLLDEMVL----KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
L E +L N D+V IL+D+ K G V +A + M ++ V D V Y+
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
++ G C + A M +RGV P+V +YN +I LCK DEA +L M
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
+ P++++Y +I GLC G V+ A E L M +++ +N +D +
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
++++ ++ G++P++ T N L+ G K GR+ DA V ++ + + TYN ++
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGA 484
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
C G A L +M GC D IT+ ++ L KG KAE LL + A
Sbjct: 485 ACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQA 538
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 203/433 (46%), Gaps = 4/433 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + +M+ + P +I N +L L K + A L R+M G +PN V+ N
Sbjct: 137 LDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNT 196
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKL----HRALQFHDDV 149
LI C + A + + K G P+ +T N ++ LC G + + L+ D
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
LD V L++ K G ALE+ + + + + V+YN II LC +
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
A+ +M+ +G++P+V TY+ LI C G+ +A L M + PD ++Y ++
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ L G V A L M+K + P+V+ ++ ++DGY + + A V N M GV
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
PNV + N +I+G K + +A + EM KI P+ TY+ L+ C G + A++
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
L DEM RG DIITY + LC + K +L+ +I GI D + IL
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYT 556
Query: 450 KCGRIKDAQEVFQ 462
+ R +A V++
Sbjct: 557 RLQRPGEAYLVYK 569
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 147/301 (48%), Gaps = 3/301 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV + + M Q + + +N ++ L + + A M G+ P+ T N
Sbjct: 280 NVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYN 339
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ C G+ A + + G PD I++ +I+GLC+HG ++RA +F +L
Sbjct: 340 TLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKS 399
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ + + +I+G + G T +AL +L + G+KP V N +I K + A
Sbjct: 400 SLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDA 459
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ + +EM + I P+ TY+ L+ C +G L+ A L DEM+ + PD++TY LV
Sbjct: 460 WWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRG 519
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN---AMARRGV 329
L +G++++A+++L+ + G+ D V + L Y + +A V+ A RGV
Sbjct: 520 LCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGV 579
Query: 330 T 330
+
Sbjct: 580 S 580
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 230/487 (47%), Gaps = 41/487 (8%)
Query: 89 VTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDD 148
L +++ C + +A SV+ + + G+ D +I C + L AL F D
Sbjct: 284 AVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDK 343
Query: 149 VLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
+L +G +++ V + ++ CKM ALE + I V YN D+L K+
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR 403
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
V AF+L EM +GI P+V+ Y+ LI G+C+ G++ A+ L+DEM+ + PD++TYN+
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR- 327
LV L + G E + M +G KP+ VT S +++G C +V +A D F+++ ++
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Query: 328 --------------GVTPNVQS-------------YNIMIYGLCKIKMVDEALNLLEEMD 360
G++ Y + + LC +++A ++L++M
Sbjct: 524 PENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
++ P + +I CK V A L D M RG D+ TY + C+ + +
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKC-----------GRI--KDAQEVFQDLFKK 467
K +L + + +GI+PD+ TY +LLD K G + + A EV ++
Sbjct: 644 KAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAA 703
Query: 468 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
G L+ Y +I+ CK ++A L +M D+G D + + T+IS+ F KG D A
Sbjct: 704 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763
Query: 528 EKLLREM 534
L+ E+
Sbjct: 764 VTLVTEL 770
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 217/476 (45%), Gaps = 51/476 (10%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ + + F ++ML + + + +L K A+ ++ I + V N
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+ + LG+ AF +L + RG PD I + TLI G CL GK+ AL D+++
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D +TY L++GL + G E LE+ R++ G KP V + II+ LC + V A
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 213 FDLYSEMIAK---------------GISPNVV-------------TYSALIYGFCIVGQL 244
D +S + K G+S Y L + CI G L
Sbjct: 513 EDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYL 572
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
++A +L +M ++P ++ A K VREA+ + M+++G+ PD+ TY+ +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+ YC +NE+ KA +F M +RG+ P+V +Y +++ Y K+
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD------------------RYLKL 674
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
P S + G + GK A E+L E G D++ Y +D CK +++++
Sbjct: 675 DPEHHETCS-VQG--EVGK-RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAE 730
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
L ++ID G++PDM Y L+ + G I A + +L KK YN+ + ++ +
Sbjct: 731 LFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK-YNIPSESFEAAV 785
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 144/605 (23%), Positives = 240/605 (39%), Gaps = 130/605 (21%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITP-----NFVTLNI---LINCHCYLGQTT 105
I+ + VL L+K + ++ +E+ G +FV + + L+ + LG
Sbjct: 106 IKLDSVLVELIKNEE--RGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFD 163
Query: 106 SAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLI 165
A VL + D N L+ + GK+ + + G ++ TYA ++
Sbjct: 164 EATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVV 223
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK--- 222
LC+ G E A LL IE +V Y T I+ LC A L E+I +
Sbjct: 224 KALCRKGNLEEAAMLL--IENE----SVFGYKTFINGLCVTGETEKAVALILELIDRKYL 277
Query: 223 -----------------------------------GISPNVVTYSALIYGFCIVGQLKQA 247
G +V A+I +C L +A
Sbjct: 278 AGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEA 337
Query: 248 IGLLDEMVLK-----------------------------------NIDPDVVTYNILVDA 272
+G LD+M+ K NI D V YN+ DA
Sbjct: 338 LGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDA 397
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K G+V EA +L M +G+ PDV+ Y++L+DGYCL +V A D+ + M G++P+
Sbjct: 398 LSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPD 457
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ +YN+++ GL + +E L + E M E PN VT S +I+GLC KV A +
Sbjct: 458 LITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFS 517
Query: 393 EMH----------VRG------------------QPADIITYNSFLDALCKGHHVDKGIA 424
+ V+G P Y +LC +++K
Sbjct: 518 SLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHD 577
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
++KK+ ++P ++ CK +++AQ +F + ++G + +TY MI+ C
Sbjct: 578 VLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE-----------KGE--NDKAEKLL 531
+ +A +L M+ G D +T+ ++ + +GE KA ++L
Sbjct: 638 RLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVL 697
Query: 532 REMIA 536
RE A
Sbjct: 698 REFSA 702
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 215/487 (44%), Gaps = 43/487 (8%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK---RGY--------- 119
A+S RQ++ G++PN L+ G SVL ++K RG+
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVI 132
Query: 120 ----HPDTITF------NTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT----LI 165
+F L+K G A DVL Q +LD V L+
Sbjct: 133 GEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEA----TDVLFQSKRLDCVVDIKACNFLM 188
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
N + + G+ + L ++++ G+ Y ++ +LC+ + A L E +
Sbjct: 189 NRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------N 242
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI---DPDVVTYNILVDALGKEGKVREA 282
+V Y I G C+ G+ ++A+ L+ E++ + D ++V E K++ A
Sbjct: 243 ESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAA 302
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
++++ M + G DV +++D YC + +A + M +G+ N ++++
Sbjct: 303 ESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQC 362
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
CK+ M EAL +E I ++V Y+ D L K G+V A+ELL EM RG D
Sbjct: 363 YCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD 422
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
+I Y + +D C V + LI ++I G+ PD+ TYN+L+ GL + G ++ E+++
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
+ +G N T + +I GLC EA S +E C + +F + E G
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK-CPENKASF---VKGYCEAG 538
Query: 523 ENDKAEK 529
+ KA K
Sbjct: 539 LSKKAYK 545
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 185/439 (42%), Gaps = 34/439 (7%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHG---KLHRALQFHDDVLAQGFQLDQ--VTY 161
A S L + + G P+ + TL++ L G KL D VL + + ++ T
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKL-------DSVLVELIKNEERGFTV 125
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
LI + + + + +L R+ G +K V + + D V S D ++ A
Sbjct: 126 MDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSL--GMFDEATDVLFQSKRLDCVVDIKA 183
Query: 222 KGISPNVVT-YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
N +T + + + QLKQ +GL + TY I+V AL ++G +
Sbjct: 184 CNFLMNRMTEFGKIGMLMTLFKQLKQ-LGLC---------ANEYTYAIVVKALCRKGNLE 233
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN---VQSYN 337
EA +L V Y + ++G C+ E KA + + R
Sbjct: 234 EAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLG 287
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
+++ G C + A +++ EM+ + ++ID CK + A LD+M +
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
G + + + L CK + + K+ D I D YN+ D L K GR+++A
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
E+ Q++ +G + Y T+I+G C +G +AL L+ +M NG D IT+ ++S
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 518 LFEKGENDKAEKLLREMIA 536
L G ++ ++ M A
Sbjct: 468 LARNGHEEEVLEIYERMKA 486
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 191/343 (55%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D VT ++L+NG C + A+ + ++E GIK VV+ +ID+LCK +LV A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ M +GISPNVVTYS+LI G C G+L A L EM K I+P+V+T++ L+DA
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K GK+ + ++ +MI+ + P+V TYSSL+ G C+ N V++A + + M +G TPN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +Y+ + G K VD+ + LL++M + N V+ ++LI G + GK+ A +
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M G +I +YN L L V+K ++ + + D+ TY I++ G+CK
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
+K+A ++F L K + Y MI L + G+ EA L
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 182/344 (52%)
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
++K G PD +T ++L+ G CL + A+ + G + D V LI+ LCK
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
ALE+L+R++ RGI P VV Y+++I LCK ++ A EM +K I+PNV+T+SA
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI + G+L + + M+ +IDP+V TY+ L+ L +V EA ML +MI +G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
P+VVTYS+L +G+ + V+ + + M +RGV N S N +I G + +D AL
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
+ M +IPN +Y+ ++ GL G+V A + M DIITY + +
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
CK V + L K+ K ++PD Y I++ L + G +A
Sbjct: 304 CKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 171/324 (52%)
Query: 83 GITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA 142
GI P+ VT + L+N C A V + K G D + LI LC + + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 143 LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS 202
L+ + +G + VTY++LI GLCK G+ A L ++ + I P V+ ++ +ID+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 203 LCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD 262
K +S +Y MI I PNV TYS+LIYG C+ ++ +AI +LD M+ K P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
VVTY+ L + K +V + +L M ++GV + V+ ++L+ GY +++ A VF
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
M G+ PN++SYNI++ GL V++AL+ E M + + +TY+ +I G+CK
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 383 KVSNAWELLDEMHVRGQPADIITY 406
V A++L ++ + D Y
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAY 331
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 186/345 (53%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
GI+P +V +++++ C + A + +M GI +VV + LI C + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+ +L M + I P+VVTY+ L+ L K G++ +A+ L M + + P+V+T+S+L+D
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
Y +++K V+ M + + PNV +Y+ +IYGLC VDEA+ +L+ M + PN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
VTYS+L +G K+ +V + +LLD+M RG A+ ++ N+ + + +D + +
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+ G+ P++ +YNI+L GL G ++ A F+ + K +L+ TY MI+G+CK
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
+ EA L K++ D + +I+ L G +A+ L R
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 184/366 (50%), Gaps = 5/366 (1%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
+M+++ I P I+ + ++ + A+ ++ QME GI + V ILI+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
A VL + RG P+ +T+++LI GLC G+L A + ++ ++ + +T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
LI+ K G+ + + + I P V Y+++I LC V A + MI+K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G +PNVVTYS L GF ++ I LLD+M + + + V+ N L+ + GK+ A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ M G+ P++ +Y+ ++ G EV KA F M + ++ +Y IMI+G
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL--LDEMHVR--- 397
+CK MV EA +L ++ ++++ P+ Y+ +I L + G + A L + HVR
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNE 362
Query: 398 GQPADI 403
PA++
Sbjct: 363 SAPAEV 368
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 151/282 (53%)
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
+M+ I+PD+VT + LV+ +++A + M K G+K DVV + L+D C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
V A +V M RG++PNV +Y+ +I GLCK + +A L EMD +KI PN +T+S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+LID K GK+S + M ++ TY+S + LC + VD+ I ++ +I K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
G P++ TY+ L +G K R+ D ++ D+ ++G N + NT+I G + G D A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
L + M NG I + ++ +++ LF GE +KA M
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 142/252 (56%)
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
M+K G++PD+VT SSL++G+CL N + A V M + G+ +V I+I LCK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
V AL +L+ M I PN VTYSSLI GLCK+G++++A L EM + ++IT+++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
+DA K + K ++ K +I I P++ TY+ L+ GLC R+ +A ++ + KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
N TY+T+ NG K D+ + L+ M G + ++ T+I F+ G+ D A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 529 KLLREMIARDLL 540
+ M + L+
Sbjct: 244 GVFGYMTSNGLI 255
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 161/320 (50%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++ D V +M +M I ++ ++ +L K + A+ + ++M+ GI+PN VT +
Sbjct: 28 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 87
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI C G+ A L + + +P+ ITF+ LI GKL + + ++
Sbjct: 88 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQM 147
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ TY++LI GLC + + A+++L + +G P VV Y+T+ + K V
Sbjct: 148 SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDG 207
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L +M +G++ N V+ + LI G+ G++ A+G+ M + P++ +YNI++
Sbjct: 208 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 267
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L G+V +A + M K D++TY+ ++ G C V +A D+F + + V P+
Sbjct: 268 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Query: 333 VQSYNIMIYGLCKIKMVDEA 352
++Y IMI L + M EA
Sbjct: 328 FKAYTIMIAELNRAGMRTEA 347
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%)
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
K++ GI+PD+ T + L++G C IKDA V + K G + +I+ LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
L AL ++ +M+D G + +T+ ++I+ L + G AE+ L EM ++ +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 114
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 215/425 (50%), Gaps = 3/425 (0%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRG 118
+L +++ A M G N L++ I +C G + +L + G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
PD + F I LC G L A + G D V+ +++I+G CK+G+ E A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+L+ ++P + +Y++ + ++C + A ++ E+ G+ P+ V Y+ +I G+
Sbjct: 362 KLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C +G+ +A ++ P + T IL+ A + G + +A+++ M +G+K DV
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
VTY++LM GY +++NK ++ + M G++P+V +YNI+I+ + +DEA ++ E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
+ +P+ + ++ +I G K G A+ L M D++T ++ L CK
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K I L K++D G++PD+ YN L+ G C G I+ A E+ + ++G N T++
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 479 MINGL 483
++ GL
Sbjct: 659 LVLGL 663
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 227/454 (50%), Gaps = 11/454 (2%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKG-LCLHGKLHRALQFHDDV 149
+ILI+C + A + + + G P +L+K L +HG L A +F + +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHG-LELAREFVEHM 262
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
L++G L+ + I C G + ELL ++ GI+P +V + ID LCK +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
A + ++ GIS + V+ S++I GFC VG+ ++AI L+ L+ P++ Y+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSF 379
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ + G + A + + + G+ PD V Y++++DGYC + +KA F A+ + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
P++ + I+I + + +A ++ M E + + VTY++L+ G KT +++ +E
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
L+DEM G D+ TYN + ++ ++D+ +I ++I +G P + ++ G
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 450 KCGRIKDAQEVFQDLFKKG---YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
K G D QE F F + T + +++G CK ++A+ L +K+ D G
Sbjct: 560 KRG---DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 507 DPITFETIISALFEKGENDKAEKLLREMIARDLL 540
D + + T+I G+ +KA +L+ M+ R +L
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 181/370 (48%), Gaps = 38/370 (10%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M I P I+ F + L K A S+ ++++ GI+ + V+++ +I+ C +G+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
A ++ + R P+ +++ + +C G + RA ++ G D V Y T
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
+I+G C +G+T+ A + + G P++ +I + + +S A ++ M +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
+ +VVTY+ L++G+ QL + L+DEM I PDV TYNIL+ ++ G + EA
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 284 NMLAVMIKQG-----------------------------------VKPDVVTYSSLMDGY 308
+++ +I++G +KPDVVT S+L+ GY
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C + KA +FN + G+ P+V YN +I+G C + +++A L+ M ++PN+
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 369 VTYSSLIDGL 378
T+ +L+ GL
Sbjct: 654 STHHALVLGL 663
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 168/318 (52%), Gaps = 5/318 (1%)
Query: 46 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTT 105
R+ P I ++ L+++ T A ++ +++ G+ P+ V +I+ +C LG+T
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 106 SAFSVLANILKRGYHPDTITFNTLIKGLCLH-GKLHRALQFHDDVLAQGFQLDQVTYATL 164
AF +LK G +P ++T +T++ G C G + A ++ +G +LD VTY L
Sbjct: 426 KAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
++G K Q EL+ + GI P V YN +I S+ + A ++ SE+I +G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
P+ + ++ +I GF G ++A L M + PDVVT + L+ K ++ +A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
+ ++ G+KPDVV Y++L+ GYC V ++ KA ++ M +RG+ PN +++ ++ GL
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLE 664
Query: 345 KIKMVD---EALNLLEEM 359
+ V+ A LLEE+
Sbjct: 665 GKRFVNSETHASMLLEEI 682
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 167/358 (46%), Gaps = 6/358 (1%)
Query: 183 RIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVG 242
RI+ R ++ +++ +ID + + V+ A L ++ GI P+ +L+ V
Sbjct: 194 RIDRRVLE---TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVH 250
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
L+ A ++ M+ + + ++ + +G + +L M G++PD+V ++
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT 310
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
+D C + +A V + G++ + S + +I G CK+ +EA+ L+
Sbjct: 311 VFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF--- 367
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
++ PN YSS + +C TG + A + E+ G D + Y + +D C DK
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
++ G P + T IL+ + G I DA+ VF+++ +G L+ TYN +++G
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
K ++ L+ +M G D T+ +I ++ +G D+A +++ E+I R +
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D +F +L+ P + ++ + + S A S+ R M+ G+ + VT N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ + Q F ++ + G PD T+N LI + + G + A + +++ +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ + +I G K G + A L + +KP VV + ++ CK + + A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L+++++ G+ P+VV Y+ LI+G+C VG +++A L+ MV + + P+ T++ LV LG
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LG 662
Query: 275 KEGK 278
EGK
Sbjct: 663 LEGK 666
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++ D S F M + ++ +N ++ KT + L +M GI+P+ T N
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI+ G A +++ +++RG+ P T+ F +I G G A +
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ D VT + L++G CK + E A+ L ++ G+KP VV+YNT+I C V + A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGF---CIVGQLKQAIGLLDEMVL 256
+L M+ +G+ PN T+ AL+ G V A LL+E+++
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIV 684
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 215/425 (50%), Gaps = 3/425 (0%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRG 118
+L +++ A M G N L++ I +C G + +L + G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
PD + F I LC G L A + G D V+ +++I+G CK+G+ E A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+L+ ++P + +Y++ + ++C + A ++ E+ G+ P+ V Y+ +I G+
Sbjct: 362 KLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C +G+ +A ++ P + T IL+ A + G + +A+++ M +G+K DV
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
VTY++LM GY +++NK ++ + M G++P+V +YNI+I+ + +DEA ++ E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
+ +P+ + ++ +I G K G A+ L M D++T ++ L CK
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++K I L K++D G++PD+ YN L+ G C G I+ A E+ + ++G N T++
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 479 MINGL 483
++ GL
Sbjct: 659 LVLGL 663
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 227/454 (50%), Gaps = 11/454 (2%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKG-LCLHGKLHRALQFHDDV 149
+ILI+C + A + + + G P +L+K L +HG L A +F + +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHG-LELAREFVEHM 262
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
L++G L+ + I C G + ELL ++ GI+P +V + ID LCK +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
A + ++ GIS + V+ S++I GFC VG+ ++AI L+ L+ P++ Y+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSF 379
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ + G + A + + + G+ PD V Y++++DGYC + +KA F A+ + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
P++ + I+I + + +A ++ M E + + VTY++L+ G KT +++ +E
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
L+DEM G D+ TYN + ++ ++D+ +I ++I +G P + ++ G
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 450 KCGRIKDAQEVFQDLFKKG---YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
K G D QE F F + T + +++G CK ++A+ L +K+ D G
Sbjct: 560 KRG---DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 507 DPITFETIISALFEKGENDKAEKLLREMIARDLL 540
D + + T+I G+ +KA +L+ M+ R +L
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 181/370 (48%), Gaps = 38/370 (10%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M I P I+ F + L K A S+ ++++ GI+ + V+++ +I+ C +G+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
A ++ + R P+ +++ + +C G + RA ++ G D V Y T
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
+I+G C +G+T+ A + + G P++ +I + + +S A ++ M +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
+ +VVTY+ L++G+ QL + L+DEM I PDV TYNIL+ ++ G + EA
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 284 NMLAVMIKQG-----------------------------------VKPDVVTYSSLMDGY 308
+++ +I++G +KPDVVT S+L+ GY
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C + KA +FN + G+ P+V YN +I+G C + +++A L+ M ++PN+
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 369 VTYSSLIDGL 378
T+ +L+ GL
Sbjct: 654 STHHALVLGL 663
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 168/318 (52%), Gaps = 5/318 (1%)
Query: 46 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTT 105
R+ P I ++ L+++ T A ++ +++ G+ P+ V +I+ +C LG+T
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 106 SAFSVLANILKRGYHPDTITFNTLIKGLCLH-GKLHRALQFHDDVLAQGFQLDQVTYATL 164
AF +LK G +P ++T +T++ G C G + A ++ +G +LD VTY L
Sbjct: 426 KAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
++G K Q EL+ + GI P V YN +I S+ + A ++ SE+I +G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
P+ + ++ +I GF G ++A L M + PDVVT + L+ K ++ +A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
+ ++ G+KPDVV Y++L+ GYC V ++ KA ++ M +RG+ PN +++ ++ GL
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLE 664
Query: 345 KIKMVD---EALNLLEEM 359
+ V+ A LLEE+
Sbjct: 665 GKRFVNSETHASMLLEEI 682
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 167/358 (46%), Gaps = 6/358 (1%)
Query: 183 RIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVG 242
RI+ R ++ +++ +ID + + V+ A L ++ GI P+ +L+ V
Sbjct: 194 RIDRRVLE---TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVH 250
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
L+ A ++ M+ + + ++ + +G + +L M G++PD+V ++
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT 310
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
+D C + +A V + G++ + S + +I G CK+ +EA+ L+
Sbjct: 311 VFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF--- 367
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
++ PN YSS + +C TG + A + E+ G D + Y + +D C DK
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
++ G P + T IL+ + G I DA+ VF+++ +G L+ TYN +++G
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
K ++ L+ +M G D T+ +I ++ +G D+A +++ E+I R +
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D +F +L+ P + ++ + + S A S+ R M+ G+ + VT N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ + Q F ++ + G PD T+N LI + + G + A + +++ +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ + +I G K G + A L + +KP VV + ++ CK + + A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L+++++ G+ P+VV Y+ LI+G+C VG +++A L+ MV + + P+ T++ LV LG
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LG 662
Query: 275 KEGK 278
EGK
Sbjct: 663 LEGK 666
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++ D S F M + ++ +N ++ KT + L +M GI+P+ T N
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI+ G A +++ +++RG+ P T+ F +I G G A +
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ D VT + L++G CK + E A+ L ++ G+KP VV+YNT+I C V + A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGF---CIVGQLKQAIGLLDEMVL 256
+L M+ +G+ PN T+ AL+ G V A LL+E+++
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIV 684
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 210/398 (52%), Gaps = 13/398 (3%)
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+L + +LI G + +++L + ++ GI P+V+ +N+++ L K A D
Sbjct: 135 KLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHD 194
Query: 215 LYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ EM G++P+ T++ LI GFC + +A + +M L + +PDVVTYN ++D L
Sbjct: 195 LFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 274 GKEGKVREAKNMLAVMIKQG--VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ GKV+ A N+L+ M+K+ V P+VV+Y++L+ GYC+ E+++A VF+ M RG+ P
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMD--YEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
N +YN +I GL + DE ++L + + P+ T++ LI C G + A +
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI-------QPDMCTYN 442
+ EM D +Y+ + LC + D+ L ++ +K + +P YN
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 502
+ + LC G+ K A++VF+ L K+G + +Y T+I G C+EG F A L+ M
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRR 493
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ D T+E +I L + GE A L+ M+ L
Sbjct: 494 EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 215/455 (47%), Gaps = 15/455 (3%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
N LI + G + + + + G P +TFN+L+ L G+ A D++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 151 -AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
G D T+ TLING CK + A + + +E P VV YNTIID LC+ V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 210 SHAFDLYSEMIAKG--ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYN 267
A ++ S M+ K + PNVV+Y+ L+ G+C+ ++ +A+ + +M+ + + P+ VTYN
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 268 ILVDALGKEGKVREAKNML--AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
L+ L + + E K++L PD T++ L+ +C ++ A VF M
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII-------PNKVTYSSLIDGL 378
+ P+ SY+++I LC D A L E+ ++++ P Y+ + + L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
C GK A ++ ++ RG D +Y + + C+ L+ ++ + PD+
Sbjct: 441 CANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TY +L+DGL K G A + Q + + Y T+++++ L K +E+ L++
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL 559
Query: 499 MEDNGCIHDPITFET-IISALFEKGENDKAEKLLR 532
M + I I T ++ LF + +KA ++R
Sbjct: 560 MLEKR-IRQNIDLSTQVVRLLFSSAQKEKAFLIVR 593
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 232/516 (44%), Gaps = 53/516 (10%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPNFVTLNIL 94
++V F M QM I+P ++ FN +L+ L+K A L +M T G+TP+ T N L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL--AQ 152
IN C AF + ++ +PD +T+NT+I GLC GK+ A +L A
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ V+Y TL+ G C + + A+ + + RG+KP V YNT+I L + +H
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE----AHR 331
Query: 213 FDLYSEMIAKG------ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
+D +++ G +P+ T++ LI C G L A+ + EM+ + PD +Y
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGV-------KPDVVTYSSLMDGYCLVNEVNKARD 319
++L+ L + A+ + + ++ V KP Y+ + + C + +A
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
VF + +RGV + SY +I G C+ A LL M + +P+ TY LIDGL
Sbjct: 452 VFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLL 510
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP--D 437
K G+ A + L M T++S L L K ++ L+ +++K I+ D
Sbjct: 511 KIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNID 570
Query: 438 MCTYNI------------------------------LLDGLCKCGRIKDAQEVFQDLFKK 467
+ T + LL LC+ ++ DA + +K
Sbjct: 571 LSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEK 630
Query: 468 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
++ T NT+I GLCK EA +L +++ + G
Sbjct: 631 SQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 185/438 (42%), Gaps = 52/438 (11%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTA--ISLSRQMEITGITPNFVTL 91
+D+ V F+ ML + P + +N ++ L + Y I + T P+ T
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
NILI HC G +A V +L HPD+ +++ LI+ LC+ + RA +++
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 152 QGFQLDQ-------VTYATLINGLCKMGQTEAALELLRRIEGRGIK--PTVVMYNTIIDS 202
+ L + Y + LC G+T+ A ++ R++ RG++ P+ Y T+I
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITG 473
Query: 203 LCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD 262
C+ A++L M+ + P++ TY LI G +G+ A L M+ + P
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
T++ ++ L K E+ ++ +M+++ ++ ++ D+
Sbjct: 534 ATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNI--------------------DLST 573
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
+ R + + +I + LL + Y V L+ LC+
Sbjct: 574 QVVRLLFSSAQKEKAFLI------------VRLLYDNGY------LVKMEELLGYLCENR 615
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
K+ +A L+ + Q DI T N+ ++ LCK + +L ++++ G + +
Sbjct: 616 KLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHV 675
Query: 443 ILLDGLCKCGRIKDAQEV 460
+L + L G+ ++ Q V
Sbjct: 676 VLRNALEAAGKWEELQFV 693
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 137/303 (45%), Gaps = 11/303 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGI-------T 85
++D + F ML M++ P ++ ++ +L + A +L ++ +
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 86 PNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
P N + C G+T A V ++KRG D ++ TLI G C GK A +
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYEL 486
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
+L + F D TY LI+GL K+G+ A + L+R+ P +++++ L K
Sbjct: 487 LVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAK 546
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
K + +F L + M+ K I N+ + ++ Q ++A L+ ++ N +V
Sbjct: 547 RKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAF-LIVRLLYDN--GYLVK 603
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
L+ L + K+ +A ++ +++ D+ T +++++G C ++A ++N +
Sbjct: 604 MEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELV 663
Query: 326 RRG 328
G
Sbjct: 664 ELG 666
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 233/493 (47%), Gaps = 42/493 (8%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + + +M + I P + +N ++ LV +A + ME I P+ VT N
Sbjct: 203 VEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNT 262
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I +C GQT A L ++ RG+ D IT+ T+I+ + + ++ +G
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
Q+ ++ +I GLCK G+ + + +G KP V +Y +ID K V A
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L MI +G P+VVTYS ++ G C G++++A+ + + + Y+ L+D L
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARRGVTPN 332
GK G+V EA+ + M ++G D Y++L+D + +V++A +F M G
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +Y I++ G+ K +EAL L + M + I P + +L GLC +GKV+ A ++LD
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
E+ P +I LDA C+ +++ LCK G
Sbjct: 563 EL----APMGVI-----LDAACED---------------------------MINTLCKAG 586
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM-SKM----EDNGCIHD 507
RIK+A ++ + ++G + MIN L K G D A+ LM SK+ E G +
Sbjct: 587 RIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKR 646
Query: 508 PITFETIISALFE 520
+ F T++ F+
Sbjct: 647 RVKFTTLLETCFD 659
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 212/452 (46%), Gaps = 11/452 (2%)
Query: 96 NCHCY--------LGQTTSAFSVLANILKRGYHPDTITF-NTLIKGLCLHGKLHRALQFH 146
N CY L + +++ +K+ P T++ N LIK G + L
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
+ G + TY L+NGL ++A + +E IKP +V YNT+I CK
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
A + +M +G + +TY +I + L EM K I +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
++++ L KEGK+ E + MI++G KP+V Y+ L+DGY V A + + M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
G P+V +Y++++ GLCK V+EAL+ ++ + N + YSSLIDGL K G+V
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKI-IDKGIQPDMCTYNILL 445
A L +EM +G D YN+ +DA K VD+ IAL K++ ++G + TY ILL
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
G+ K R ++A +++ + KG + + GLC G A ++ ++ G I
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMIAR 537
D E +I+ L + G +A KL + R
Sbjct: 571 LDAAC-EDMINTLCKAGRIKEACKLADGITER 601
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 37/281 (13%)
Query: 14 SNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAI 73
S PN +V+D + +RM+ P ++ ++ V+ L K A+
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 74 SLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGL 133
G+ N ++ +++LI GL
Sbjct: 418 DYFHTCRFDGLAIN-----------------------------------SMFYSSLIDGL 442
Query: 134 CLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPT 192
G++ A + +++ +G D Y LI+ K + + A+ L +R+ E G T
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
V Y ++ + K A L+ MI KGI+P + AL G C+ G++ +A +LD
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
E+ + D + +++ L K G+++EA + + ++G
Sbjct: 563 ELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERG 602
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%)
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+K N Y SL+D L V + E+ P + N+ + + K V++
Sbjct: 146 KKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEE 205
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
+ + +K+ + GI+P + TYN L++GL + A+ VF+ + + TYNTMI
Sbjct: 206 LLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIK 265
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
G CK G +A+ + ME G D IT+ T+I A + + L +EM
Sbjct: 266 GYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 198/372 (53%), Gaps = 5/372 (1%)
Query: 55 EFNKVLTSLVKTKHYSTAISLSRQMEITGITPNF----VTLNILINCHCYLGQTTSAFSV 110
E K+ ++++ T +++++++ T + + LI+ + G A SV
Sbjct: 231 EQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISV 290
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHG-KLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
++ + G P+ +T+N +I G + + +F D++ G Q D++T+ +L+
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS 350
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
+ G EAA L + R I+ V YNT++D++CK + AF++ ++M K I PNVV
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
+YS +I GF G+ +A+ L EM I D V+YN L+ K G+ EA ++L M
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
G+K DVVTY++L+ GY + ++ + VF M R V PN+ +Y+ +I G K +
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
EA+ + E + + V YS+LID LCK G V +A L+DEM G +++TYNS
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 410 LDALCKGHHVDK 421
+DA + +D+
Sbjct: 591 IDAFGRSATMDR 602
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 257/516 (49%), Gaps = 38/516 (7%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
+ F+ ++++ ++ + AIS+ M+ G+ PN VT N +I+ C G+ F +A
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-C--GKGGMEFKQVA 324
Query: 113 NIL----KRGYHPDTITFNTLIKGLCLHGKLHRALQ-FHDDVLAQGFQLDQVTYATLING 167
+ G PD ITFN+L+ +C G L A + D++ + + D +Y TL++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
+CK GQ + A E+L ++ + I P VV Y+T+ID K A +L+ EM GI+ +
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
V+Y+ L+ + VG+ ++A+ +L EM I DVVTYN L+ GK+GK E K +
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M ++ V P+++TYS+L+DGY +A ++F G+ +V Y+ +I LCK
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV---------------SNAWELLD 392
+V A++L++EM E I PN VTY+S+ID ++ + S+A L
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 393 E------MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
E + + GQ + D + + + +K+ I+P++ T++ +L+
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 683
Query: 447 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC---KEGLFDEALTLMSKMEDNG 503
+C +DA + ++L +N Y +++GL +E ++ +A +L K+ +
Sbjct: 684 ACSRCNSFEDASMLLEEL----RLFDNKVYG-VVHGLLMGQRENVWLQAQSLFDKVNEMD 738
Query: 504 CIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ + L+ G+ AE + E +R +
Sbjct: 739 GSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQV 774
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 189/368 (51%), Gaps = 3/368 (0%)
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
+ +I+ L + G+ A + G TV ++ +I + + L A +++ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 222 KGISPNVVTYSALIYGFCIVG--QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
G+ PN+VTY+A+I C G + KQ DEM + PD +T+N L+ + G
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
A+N+ M + ++ DV +Y++L+D C +++ A ++ M + + PNV SY+ +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I G K DEALNL EM Y I ++V+Y++L+ K G+ A ++L EM G
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
D++TYN+ L K D+ + ++ + + P++ TY+ L+DG K G K+A E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+F++ G + Y+ +I+ LCK GL A++L+ +M G + +T+ +II A
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Query: 520 EKGENDKA 527
D++
Sbjct: 596 RSATMDRS 603
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 177/352 (50%), Gaps = 1/352 (0%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
G+ T A + GY F+ LI G A+ + + G + + VTY
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 162 ATLINGLCKMG-QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+I+ K G + + + ++ G++P + +N+++ + L A +L+ EM
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+ I +V +Y+ L+ C GQ+ A +L +M +K I P+VV+Y+ ++D K G+
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA N+ M G+ D V+Y++L+ Y V +A D+ MA G+ +V +YN ++
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G K DE + EM E ++PN +TYS+LIDG K G A E+ E G
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
AD++ Y++ +DALCK V ++LI ++ +GI P++ TYN ++D +
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 193/365 (52%), Gaps = 6/365 (1%)
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
+G E A++ RR +G + + +I +L + V+ A ++ A G V
Sbjct: 216 VGFYEFAVKRERRKNEQG-----KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYA 270
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG-KVREAKNMLAVM 289
+SALI + G ++AI + + M + P++VTYN ++DA GK G + ++ M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ GV+PD +T++SL+ AR++F+ M R + +V SYN ++ +CK +
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
D A +L +M ++I+PN V+YS++IDG K G+ A L EM G D ++YN+
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
L K ++ + +++++ GI+ D+ TYN LL G K G+ + ++VF ++ ++
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
N TY+T+I+G K GL+ EA+ + + + G D + + +I AL + G A
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 530 LLREM 534
L+ EM
Sbjct: 571 LIDEM 575
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 192/378 (50%), Gaps = 21/378 (5%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
FF+ M + + P I FN +L + + A +L +M I + + N L++ C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
GQ AF +LA + + P+ ++++T+I G G+ AL ++ G LD+V
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+Y TL++ K+G++E AL++LR + GIK VV YN ++ K +++EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ + PN++TYS LI G+ G K+A+ + E + DVV Y+ L+DAL K G V
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV-------FNAMARRGVTPN 332
A +++ M K+G+ P+VVTY+S++D + ++++ D F++ A +T
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTET 625
Query: 333 VQSYNIMIYGL------------CKIKMVDEA--LNLLEEMDYEKIIPNKVTYSSLIDGL 378
+ I ++G C+ M + + L + +M +I PN VT+S++++
Sbjct: 626 EGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNAC 685
Query: 379 CKTGKVSNAWELLDEMHV 396
+ +A LL+E+ +
Sbjct: 686 SRCNSFEDASMLLEELRL 703
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 14/283 (4%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D+ ++ F M + I + +N +L+ K A+ + R+M GI + VT N L
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+ + G+ V + + P+ +T++TLI G G A++ + + G
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D V Y+ LI+ LCK G +A+ L+ + GI P VV YN+IID+ + + + D
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
YS + S + ++ G ++ Q + K+ + + + +++
Sbjct: 606 -YSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFR 664
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
K M + +KP+VVT+S++++ N A
Sbjct: 665 K-------------MHQLEIKPNVVTFSAILNACSRCNSFEDA 694
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
S++I L + GKV+ A + + G + +++ + A + ++ I++ + +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 432 KGIQPDMCTYNILLDGLCKCG-RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
G++P++ TYN ++D K G K + F ++ + G + T+N+++ + GL++
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
A L +M + D ++ T++ A+ + G+ D A ++L +M + ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 230/496 (46%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F RM ITP + ++ + + A+S R+M+ GI + VT ++++
Sbjct: 332 FERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSK 391
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G +A + + + +I C + RA ++ +G
Sbjct: 392 AGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI 451
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y T+++G + + L + +R++ G PTVV Y +I+ KV +S A ++ M
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+G+ N+ TYS +I GF + A + ++MV + + PDV+ YN ++ A G +
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A + M K +P T+ ++ GY ++ ++ +VF+ M R G P V ++N +I
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
GL + + +++A+ +L+EM + N+ TY+ ++ G G A+E + G
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 691
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
DI TY + L A CK + +A+ K++ + I + YNIL+DG + G + +A ++
Sbjct: 692 VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADL 751
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
Q + K+G + TY + I+ K G + A + +ME G + T+ T+I
Sbjct: 752 IQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWAR 811
Query: 521 KGENDKAEKLLREMIA 536
+KA EM A
Sbjct: 812 ASLPEKALSCYEEMKA 827
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 230/490 (46%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D+ +S +M + I ++ ++ ++ K H A + + T N
Sbjct: 359 DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYG 418
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I HC A +++ + + G ++T++ G + + L +
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF VTY LIN K+G+ ALE+ R ++ G+K + Y+ +I+ K+K ++A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
F ++ +M+ +G+ P+V+ Y+ +I FC +G + +AI + EM P T+ ++
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G +R + + +M + G P V T++ L++G ++ KA ++ + M GV+ N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+Y ++ G + +A + E + + TY +L+ CK+G++ +A +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM R P + YN +D + V + LI+++ +G++PD+ TY + K G
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+ A + +++ G N TY T+I G + L ++AL+ +M+ G D +
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 513 TIISALFEKG 522
++++L +
Sbjct: 839 CLLTSLLSRA 848
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 215/458 (46%), Gaps = 6/458 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ K++ + +T + A +L R+ME GI + +++ + + V +
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G+ P +T+ LI GK+ +AL+ + +G + + TY+ +ING K+
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A + + G+KP V++YN II + C + + A EM P T+ +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
+G+ G +++++ + D M P V T+N L++ L ++ ++ +A +L M GV
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
+ TY+ +M GY V + KA + F + G+ ++ +Y ++ CK + AL +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
+EM I N Y+ LIDG + G V A +L+ +M G DI TY SF+ A K
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+++ I+++ G++P++ TY L+ G + + A ++++ G +
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 476 YNTMINGLCKEGLFDEA------LTLMSKMEDNGCIHD 507
Y+ ++ L EA +T+ +M + G I D
Sbjct: 837 YHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 220/488 (45%), Gaps = 39/488 (7%)
Query: 86 PNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
P+ +++ + G A + RG P + + +LI + + AL
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTV--VMYNTIIDSL 203
+ +G ++ VTY+ ++ G K G EAA E + I T+ +Y II +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD--EAKRIHKTLNASIYGKIIYAH 424
Query: 204 CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDV 263
C+ + A L EM +GI + Y ++ G+ +V K+ + + + P V
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
VTY L++ K GK+ +A + VM ++GVK ++ TYS +++G+ + + A VF
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD-----------------YEK--- 363
M + G+ P+V YN +I C + +D A+ ++EM Y K
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 364 ---------------IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
+P T++ LI+GL + ++ A E+LDEM + G A+ TY
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
+ K ++ ++G+ D+ TY LL CK GR++ A V +++ +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
N++ YN +I+G + G EA L+ +M+ G D T+ + ISA + G+ ++A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 529 KLLREMIA 536
+ + EM A
Sbjct: 785 QTIEEMEA 792
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 195/425 (45%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ + M + I PI ++ ++ + + ++++ G TP VT
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN + +G+ + A V + + G + T++ +I G A +D++ +
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D + Y +I+ C MG + A++ ++ ++ +PT + II K + +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++ M G P V T++ LI G Q+++A+ +LDEM L + + TY ++
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
G +A + +G+ D+ TY +L+ C + A V M+ R + N
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
YNI+I G + V EA +L+++M E + P+ TY+S I K G ++ A + ++
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIE 788
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM G +I TY + + + +K ++ +++ GI+PD Y+ LL L
Sbjct: 789 EMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 848
Query: 453 RIKDA 457
I +A
Sbjct: 849 SIAEA 853
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 197/420 (46%), Gaps = 2/420 (0%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P F ++K G +HRA + + + A+G Y +LI+ + AL
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
+R+++ GI+ ++V Y+ I+ K A + E + N Y +IY C
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
+++A L+ EM + ID + Y+ ++D ++ + + + G P VVT
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
Y L++ Y V +++KA +V M GV N+++Y++MI G K+K A + E+M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH-VRGQPADIITYNSFLDALCKGHHV 419
E + P+ + Y+++I C G + A + + EM +R +P T+ + K +
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT-TRTFMPIIHGYAKSGDM 605
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
+ + + + G P + T+N L++GL + +++ A E+ ++ G + N TY +
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ G G +A +++++ G D T+E ++ A + G A + +EM AR++
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 118/253 (46%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
++ F+ M + P + FN ++ LV+ + A+ + +M + G++ N T ++
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
+ +G T AF + G D T+ L+K C G++ AL ++ A+
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
+ Y LI+G + G A +L+++++ G+KP + Y + I + K ++ A
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
EM A G+ PN+ TY+ LI G+ ++A+ +EM I PD Y+ L+ +L
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847
Query: 277 GKVREAKNMLAVM 289
+ EA VM
Sbjct: 848 ASIAEAYIYSGVM 860
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 35/275 (12%)
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
KP + ++ Y ++++AR+ F M RG+TP + Y +I+ + +DEAL+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA--W------------------------ 388
+ +M E I + VTYS ++ G K G A W
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 389 ---------ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
L+ EM G A I Y++ +D KG+ + K++ + G P +
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
TY L++ K G+I A EV + + ++G N TY+ MING K + A + M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
G D I + IISA G D+A + ++EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 198/415 (47%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + F RM+ + + V+ L + + L ++ + GI P T N
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+IN + + VL + K G + +T+ L++ +GK+ A + D++ +G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D Y +LI+ C+ G + A L + +G+ P+ Y +ID +CKV + A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L +EM +KG++ V ++ LI G+C G + +A + D M K DV T N +
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+ + EAK L M++ GVK V+Y++L+D YC V +A+ +F M+ +GV PN
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+YN+MIY CK + EA L M+ + P+ TY+SLI G C V A L E
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
M ++G + +TY + L K D+ L ++ KG D Y L+ +
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 214/434 (49%), Gaps = 35/434 (8%)
Query: 136 HGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVM 195
+G L+ D ++ +G +D+ + + K + + LE+ RR+ G+K TV
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 196 YNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
+++ LC+ V + L E KGI P TY+ +I + G+L M
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
+ + VTY +L++ K GK+ +A+ + M ++G++ DV Y+SL+ C +
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
+A +F+ + +G++P+ +Y +I G+CK+ + A L+ EM + + +V +++LI
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIIT------------------------------ 405
DG C+ G V A + D M +G AD+ T
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 406 -----YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
Y + +D CK +V++ L ++ KG+QP+ TYN+++ CK G+IK+A+++
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
++ G + +++TY ++I+G C DEA+ L S+M G + +T+ +IS L +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 521 KGENDKAEKLLREM 534
G++D+A L EM
Sbjct: 587 AGKSDEAFGLYDEM 600
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 202/409 (49%)
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+ ++ G + +++GLC G++ ++ + + +G + + TY T+IN
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K +L+ ++ G+ V Y +++ K +S A L+ EM +GI +V
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
Y++LI C G +K+A L DE+ K + P TY L+D + K G++ A+ ++ M
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+GV V +++L+DGYC V++A +++ M ++G +V + N + ++K
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
DEA L M + + V+Y++LID CK G V A L EM +G + ITYN
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+ A CK + + L + G+ PD TY L+ G C + +A +F ++ KG
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+ N+ TY MI+GL K G DEA L +M+ G D + +I ++
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 151/294 (51%)
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
G ++ + + D MV K + D + + + A K ++ + M+ GVK V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+ +++G C EV K++ + + +G+ P +YN +I K + +L+ M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+ ++ NKVTY+ L++ K GK+S+A +L DEM RG +D+ Y S + C+ ++ +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
L ++ +KG+ P TY L+DG+CK G + A+ + ++ KG N+ +NT+I+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
G C++G+ DEA + ME G D T TI S D+A++ L M+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 81/158 (51%)
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G + D M +G D + FL A K +D + + ++++D G++ + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
I+++GLC+ G ++ ++++ ++ KG +TYNT+IN K+ F ++ M+
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+G +++ +T+ ++ + G+ AEKL EM R +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 240/511 (46%), Gaps = 38/511 (7%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ D+ S ++ P + ++L L K AI + M +GI P+
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L+N C G A ++ + GY +T+T+N L++GLC+ G L+++LQF + ++ +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + TY+ L+ K T+ A++LL I +G +P +V YN ++ CK A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L+ E+ AKG NVV+Y+ L+ C G+ ++A LL EM + P VVTYNIL+++
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L G+ +A +L E++K F A
Sbjct: 326 LAFHGRTEQALQVL-------------------------KEMSKGNHQFRVTA------- 353
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK-TGKVSNAWELL 391
SYN +I LCK VD + L+EM Y + PN+ TY++ I LC+ KV A+ ++
Sbjct: 354 -TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYII 411
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+ + + Y S + +LC+ + L+ ++ G PD TY+ L+ GLC
Sbjct: 412 QSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 471
Query: 452 GRIKDAQEVFQDLFKKGYNLNNW--TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 509
G A EV + ++ N +N MI GLCK D A+ + M + + +
Sbjct: 472 GMFTGAMEVLS-IMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNET 530
Query: 510 TFETIISALFEKGENDKAEKLLREMIARDLL 540
T+ ++ + + E + A+++L E+ R ++
Sbjct: 531 TYAILVEGIAHEDELELAKEVLDELRLRKVI 561
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 171/335 (51%), Gaps = 20/335 (5%)
Query: 206 VKLVSH------AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
V VSH F S+ +A+ ++ +T S F I G +
Sbjct: 22 VGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSAFTITGS--------------SW 67
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
PD+ + + D E + ++ + L ++ G KP+V + L+ C N + KA
Sbjct: 68 KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
V M G+ P+ +Y ++ LCK V A+ L+E+M+ N VTY++L+ GLC
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
G ++ + + ++ + +G + TY+ L+A K D+ + L+ +II KG +P++
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
+YN+LL G CK GR DA +F++L KG+ N +YN ++ LC +G ++EA +L+++M
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+ +T+ +I++L G ++A ++L+EM
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 225/461 (48%), Gaps = 2/461 (0%)
Query: 78 QMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHG 137
+M+ P+ T + LIN H GQ A +++ ++L+ P T+N LI G
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 138 KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
AL+ + G D VT+ +++ Q AL ++G ++P +N
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 198 TIIDSLCKVKLVSHAFDLYSEMIAKGIS--PNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
II L K+ S A DL++ M K P+VVT++++++ + + G+++ + + MV
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
+ + P++V+YN L+ A G A ++L + + G+ PDVV+Y+ L++ Y +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
KA++VF M + PNV +YN +I + EA+ + +M+ + I PN V+ +L+
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
++ K N +L RG + YNS + + ++K IAL + + K ++
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
D T+ IL+ G C+ + +A +++ L Y++++ K+G EA ++
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
++M+ GC D I + +++ A + KA +L EM A
Sbjct: 588 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 206/423 (48%), Gaps = 2/423 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N + + +M + P ++ N VL++ + YS A+S M+ + P+ T N
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGY--HPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
I+I C LGQ++ A + ++ ++ PD +TF +++ + G++ + ++
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
A+G + + V+Y L+ G + AL +L I+ GI P VV Y +++S + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A +++ M + PNVVTY+ALI + G L +A+ + +M I P+VV+ L+
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
A + K +L+ +G+ + Y+S + Y E+ KA ++ +M ++ V
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+ ++ I+I G C++ EA++ L+EM+ I K YSS++ K G+V+ A +
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
++M + G D+I Y S L A K L ++ GI+PD + L+ K
Sbjct: 588 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Query: 451 CGR 453
G+
Sbjct: 648 GGQ 650
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 223/491 (45%), Gaps = 3/491 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD F M + P ++ ++ + + + A++L M I P+ T N
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN G A V + G PD +T N ++ + +AL + + +
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRG-IKPTVVMYNTIIDSLCKVKLVSH 211
+ D T+ +I L K+GQ+ AL+L + E R +P VV + +I+ + +
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
++ M+A+G+ PN+V+Y+AL+ + + G A+ +L ++ I PDVV+Y L++
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ G+ + +AK + +M K+ KP+VVTY++L+D Y + +A ++F M + G+ P
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV S ++ + K +L I N Y+S I ++ A L
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
M + AD +T+ + C+ + I+ +K++ D I Y+ +L K
Sbjct: 519 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 578
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G++ +A+ +F + G + Y +M++ + +A L +ME NG D I
Sbjct: 579 GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIAC 638
Query: 512 ETIISALFEKG 522
++ A F KG
Sbjct: 639 SALMRA-FNKG 648
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 198/422 (46%), Gaps = 2/422 (0%)
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
+++ Y +N +I+ H + +A ++ + D TY LIN + GQ
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
A+ L+ + I P+ YN +I++ A ++ +M G+ P++VT++ +
Sbjct: 195 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 254
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ + Q +A+ + M + PD T+NI++ L K G+ +A ++ M ++
Sbjct: 255 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 314
Query: 295 --KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
+PDVVT++S+M Y + E+ R VF AM G+ PN+ SYN ++ M A
Sbjct: 315 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTA 374
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
L++L ++ IIP+ V+Y+ L++ ++ + A E+ M + +++TYN+ +DA
Sbjct: 375 LSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 434
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
+ + + + +++ GI+P++ + LL + + + V +G NLN
Sbjct: 435 YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 494
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
YN+ I ++A+ L M D +TF +IS + +A L+
Sbjct: 495 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 554
Query: 533 EM 534
EM
Sbjct: 555 EM 556
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 216/501 (43%), Gaps = 3/501 (0%)
Query: 35 DDTVSFFNRMLQMRIT--PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ FN M + R P ++ F ++ ++ M G+ PN V+ N
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L+ + G + +A SVL +I + G PD +++ L+ + +A + + +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ + VTY LI+ G A+E+ R++E GIKP VV T++ + + K +
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ S ++GI+ N Y++ I + +L++AI L M K + D VT+ IL+
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ K EA + L M + YSS++ Y +V +A +FN M G P+
Sbjct: 540 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 599
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +Y M++ + +A L EM+ I P+ + S+L+ K G+ SN + L+D
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M + P + A + I LI+ + + N +L K G
Sbjct: 660 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG 719
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+++ ++F + G +N TY ++ L G + + + ++ M G +
Sbjct: 720 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 779
Query: 513 TIISALFEKGENDKAEKLLRE 533
IIS E+ + E L+R+
Sbjct: 780 DIIS-FGERSAGIEFEPLIRQ 799
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 116/273 (42%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++ ++ + M + ++ + F +++ + Y AIS ++ME I +
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++ + GQ T A S+ + G PD I + +++ K +A + ++ A G
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D + + L+ K GQ L+ + + I T ++ I + ++ A
Sbjct: 631 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
DL M S ++ + +++ F G+++ + L +++ + ++ TY IL++ L
Sbjct: 691 DLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHL 750
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
G R+ +L M G++P Y ++
Sbjct: 751 LAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 225/461 (48%), Gaps = 2/461 (0%)
Query: 78 QMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHG 137
+M+ P+ T + LIN H GQ A +++ ++L+ P T+N LI G
Sbjct: 36 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 95
Query: 138 KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
AL+ + G D VT+ +++ Q AL ++G ++P +N
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 198 TIIDSLCKVKLVSHAFDLYSEMIAKGIS--PNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
II L K+ S A DL++ M K P+VVT++++++ + + G+++ + + MV
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
+ + P++V+YN L+ A G A ++L + + G+ PDVV+Y+ L++ Y +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
KA++VF M + PNV +YN +I + EA+ + +M+ + I PN V+ +L+
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
++ K N +L RG + YNS + + ++K IAL + + K ++
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
D T+ IL+ G C+ + +A +++ L Y++++ K+G EA ++
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
++M+ GC D I + +++ A + KA +L EM A
Sbjct: 456 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 206/423 (48%), Gaps = 2/423 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N + + +M + P ++ N VL++ + YS A+S M+ + P+ T N
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGY--HPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
I+I C LGQ++ A + ++ ++ PD +TF +++ + G++ + ++
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
A+G + + V+Y L+ G + AL +L I+ GI P VV Y +++S + +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A +++ M + PNVVTY+ALI + G L +A+ + +M I P+VV+ L+
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
A + K +L+ +G+ + Y+S + Y E+ KA ++ +M ++ V
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+ ++ I+I G C++ EA++ L+EM+ I K YSS++ K G+V+ A +
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
++M + G D+I Y S L A K L ++ GI+PD + L+ K
Sbjct: 456 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Query: 451 CGR 453
G+
Sbjct: 516 GGQ 518
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 223/491 (45%), Gaps = 3/491 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD F M + P ++ ++ + + + A++L M I P+ T N
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LIN G A V + G PD +T N ++ + +AL + + +
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRG-IKPTVVMYNTIIDSLCKVKLVSH 211
+ D T+ +I L K+GQ+ AL+L + E R +P VV + +I+ + +
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
++ M+A+G+ PN+V+Y+AL+ + + G A+ +L ++ I PDVV+Y L++
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ G+ + +AK + +M K+ KP+VVTY++L+D Y + +A ++F M + G+ P
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV S ++ + K +L I N Y+S I ++ A L
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 386
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
M + AD +T+ + C+ + I+ +K++ D I Y+ +L K
Sbjct: 387 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 446
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G++ +A+ +F + G + Y +M++ + +A L +ME NG D I
Sbjct: 447 GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIAC 506
Query: 512 ETIISALFEKG 522
++ A F KG
Sbjct: 507 SALMRA-FNKG 516
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 198/422 (46%), Gaps = 2/422 (0%)
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
+++ Y +N +I+ H + +A ++ + D TY LIN + GQ
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
A+ L+ + I P+ YN +I++ A ++ +M G+ P++VT++ +
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ + Q +A+ + M + PD T+NI++ L K G+ +A ++ M ++
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 182
Query: 295 --KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
+PDVVT++S+M Y + E+ R VF AM G+ PN+ SYN ++ M A
Sbjct: 183 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTA 242
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
L++L ++ IIP+ V+Y+ L++ ++ + A E+ M + +++TYN+ +DA
Sbjct: 243 LSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 302
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
+ + + + +++ GI+P++ + LL + + + V +G NLN
Sbjct: 303 YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 362
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
YN+ I ++A+ L M D +TF +IS + +A L+
Sbjct: 363 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 422
Query: 533 EM 534
EM
Sbjct: 423 EM 424
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 216/501 (43%), Gaps = 3/501 (0%)
Query: 35 DDTVSFFNRMLQMRIT--PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ FN M + R P ++ F ++ ++ M G+ PN V+ N
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 227
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L+ + G + +A SVL +I + G PD +++ L+ + +A + + +
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ + VTY LI+ G A+E+ R++E GIKP VV T++ + + K +
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 347
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ S ++GI+ N Y++ I + +L++AI L M K + D VT+ IL+
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 407
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ K EA + L M + YSS++ Y +V +A +FN M G P+
Sbjct: 408 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +Y M++ + +A L EM+ I P+ + S+L+ K G+ SN + L+D
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 527
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M + P + A + I LI+ + + N +L K G
Sbjct: 528 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG 587
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+++ ++F + G +N TY ++ L G + + + ++ M G +
Sbjct: 588 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 647
Query: 513 TIISALFEKGENDKAEKLLRE 533
IIS E+ + E L+R+
Sbjct: 648 DIIS-FGERSAGIEFEPLIRQ 667
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 116/273 (42%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++ ++ + M + ++ + F +++ + Y AIS ++ME I +
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++ + GQ T A S+ + G PD I + +++ K +A + ++ A G
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D + + L+ K GQ L+ + + I T ++ I + ++ A
Sbjct: 499 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 558
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
DL M S ++ + +++ F G+++ + L +++ + ++ TY IL++ L
Sbjct: 559 DLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHL 618
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
G R+ +L M G++P Y ++
Sbjct: 619 LAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 215/423 (50%), Gaps = 5/423 (1%)
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
D + L+ GL G+ A + ++ +G + +TY TL+ L + + L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
++E G+KP +++N II++ + + A ++ +M G P T++ LI G+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 242 GQLKQAIGLLDEMVLKN--IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
G+L+++ LLD M+L++ + P+ T NILV A + K+ EA N++ M GVKPDVV
Sbjct: 438 GKLEESSRLLD-MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 300 TYSSLMDGYCLVNEVNKARD-VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
T+++L Y + A D + M V PNV++ ++ G C+ ++EAL
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M + PN ++SLI G + E++D M G D++T+++ ++A
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
+ + + +++ GI PD+ ++IL G + G + A+++ + K G N Y
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Query: 479 MINGLCKEGLFDEALTLMSKMED-NGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
+I+G C G +A+ + KM G + T+ET+I E + KAE+LL++M +
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 538 DLL 540
+++
Sbjct: 737 NVV 739
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 206/417 (49%), Gaps = 3/417 (0%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
S FN +++ P +I + ++T+L + KH+ + +SL ++E G+ P+ + N +IN
Sbjct: 340 SIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS 399
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA-QGFQLD 157
G A + + + G P TFNTLIKG GKL + + D +L + Q +
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN 459
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY- 216
T L+ C + E A ++ +++ G+KP VV +NT+ + ++ A D+
Sbjct: 460 DRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMII 519
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
M+ + PNV T ++ G+C G++++A+ M + P++ +N L+
Sbjct: 520 PRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI 579
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
+ ++ +M + GVKPDVVT+S+LM+ + V ++ + +++ M G+ P++ ++
Sbjct: 580 NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM-H 395
+I+ G + ++A +L +M + PN V Y+ +I G C G++ A ++ +M
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG 699
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
+ G ++ TY + + + K L+K + K + P T ++ DG G
Sbjct: 700 IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 182/362 (50%), Gaps = 12/362 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKT-KHYSTAISLSRQMEITGITPNFVTL 91
N+D + F +M + P FN ++ K K ++ L + + PN T
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC 463
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
NIL+ C + A++++ + G PD +TFNTL K G A +D++
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA----EDMII 519
Query: 152 QGFQLDQV-----TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
++V T T++NG C+ G+ E AL R++ G+ P + ++N++I +
Sbjct: 520 PRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI 579
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
+ ++ M G+ P+VVT+S L+ + VG +K+ + +M+ IDPD+ +
Sbjct: 580 NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
+IL + G+ +A+ +L M K GV+P+VV Y+ ++ G+C E+ KA V+ M
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG 699
Query: 327 -RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
G++PN+ +Y +I+G + K +A LL++M+ + ++P + T + DG G VS
Sbjct: 700 IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG-VS 758
Query: 386 NA 387
N+
Sbjct: 759 NS 760
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 223/476 (46%), Gaps = 5/476 (1%)
Query: 58 KVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKR 117
K++ L++ A S+ + G P+ +T L+ S S+++ + K
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G PDTI FN +I G L +A++ + + G + T+ TLI G K+G+ E +
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 178 LELLR-RIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
LL + ++P N ++ + C + + A+++ +M + G+ P+VVT++ L
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 237 GFCIVGQLKQAIGLLDEMVLKN-IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
+ +G A ++ +L N + P+V T +V+ +EGK+ EA M + GV
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
P++ ++SL+ G+ +N+++ +V + M GV P+V +++ ++ + + +
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
+M I P+ +S L G + G+ A ++L++M G +++ Y + C
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 416 GHHVDKGIALIKKIID-KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
+ K + + KK+ G+ P++ TY L+ G + + A+E+ +D+ K
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRK 743
Query: 475 TYNTMINGLCKEGL--FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
T + +G G+ ++A TL S + ++ P + S LF KG +K +
Sbjct: 744 TMQLIADGWKSIGVSNSNDANTLGSSFSTSSKLNIPNNIASSRSPLFLKGMPEKPK 799
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 213/443 (48%)
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI LG V A I G P T +N +I L L A + +
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D+ TY LI+G+CK G + A+ L++++E G +P V Y +ID V A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
M + ++PN T ++G +A +L + K+ + V Y+ ++
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L +E L + ++G PD T+++ M +++ + +F+ RGV P
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPG 389
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
Y +++ L + E L++M + ++ + +Y+++ID LCK ++ NA L
Sbjct: 390 FNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLT 449
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM RG +++T+N+FL V K +++K++ G +PD+ T++++++ LC+
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
IKDA + F+++ + G N TYN +I C G D ++ L +KM++NG D +
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Query: 513 TIISALFEKGENDKAEKLLREMI 535
I + + + KAE+LL+ M+
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTML 592
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 217/470 (46%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F ++ + + P +N V+ +LVK+ A +QM G P+ T NILI+ C
Sbjct: 168 FAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCK 227
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G A ++ + + G P+ T+ LI G + G++ AL+ + + + ++ T
Sbjct: 228 KGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
T ++G+ + A E+L + V Y+ ++ L + ++
Sbjct: 288 IRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG 347
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+G P+ T++A + L + + D V + + P Y +LV AL +
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
E L M G+ V +Y++++D C + A M RG++PN+ ++N +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G V + +LE++ P+ +T+S +I+ LC+ ++ +A++ EM G
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ ITYN + + C D+ + L K+ + G+ PD+ YN + CK ++K A+E+
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
+ + + G +N+TY+T+I L + G EA + S +E +GC+ D T
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 202/459 (44%), Gaps = 4/459 (0%)
Query: 78 QMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHG 137
Q+ G+ P+ N +I+ A+ + G PD T+N LI G+C G
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 138 KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
+ A++ + +G + + TY LI+G G+ + AL+ L + R + P
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
Query: 198 TIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK 257
T + + + AF++ + K + V Y A++Y K+ L ++ +
Sbjct: 290 TFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 258 NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
PD T+N + L K + E + + +GVKP Y L+ ++
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 318 RDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
M G+ +V SYN +I LCK + ++ A L EM I PN VT+++ + G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
G V +L+++ V G D+IT++ ++ LC+ + K++++ GI+P+
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
TYNIL+ C G + ++F + + G + + + YN I CK +A L+
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
M G D T+ T+I AL E G +A REM +
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEA----REMFS 624
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 136/265 (51%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+T F+ + + P + ++ +L+ + +S +QM + G+ + + N +I
Sbjct: 373 ETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+C C + +A L + RG P+ +TFNT + G + G + + + +L GF+
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D +T++ +IN LC+ + + A + + + GI+P + YN +I S C + L
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+++M G+SP++ Y+A I FC + ++K+A LL M+ + PD TY+ L+ AL +
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVT 300
G+ EA+ M + + + G PD T
Sbjct: 613 SGRESEAREMFSSIERHGCVPDSYT 637
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 169/414 (40%), Gaps = 70/414 (16%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
DQ + L N L + G ++ELL+ I G + + + +I S ++ L + D++
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+++ G+ P+ Y+A+ +DAL K
Sbjct: 169 AQISFLGMKPSTRLYNAV-----------------------------------IDALVKS 193
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
+ A M G KPD TY+ L+ G C V++A + M + G PNV +Y
Sbjct: 194 NSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTY 253
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL------CKTGKV------ 384
I+I G VDEAL LE M K+ PN+ T + + G+ CK +V
Sbjct: 254 TILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFME 313
Query: 385 -----------------------SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+ L ++ RG D T+N+ + L KGH + +
Sbjct: 314 KDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVE 373
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
+ + +G++P Y +L+ L R + + + G + ++YN +I+
Sbjct: 374 TCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVID 433
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
LCK + A +++M+D G + +TF T +S +G+ K +L +++
Sbjct: 434 CLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ F M I+P ++ FN L+ + ++ + G P+ +T ++
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+INC C + AF +L+ G P+ IT+N LI+ C G R+++ + G
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D Y I CKM + + A ELL+ + G+KP Y+T+I +L + S A
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 620
Query: 214 DLYSEMIAKGISPNVVT 230
+++S + G P+ T
Sbjct: 621 EMFSSIERHGCVPDSYT 637
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 226/481 (46%), Gaps = 7/481 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
++ ++ +L +++ A LS++ +T +T N LI A +++A +
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTLTPLT-----YNALIGACARNNDIEKALNLIAKMR 224
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRA--LQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ GY D + ++ +I+ L K+ L+ + ++ +LD +I G K G
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
AL+LL + G+ +II +L A L+ E+ GI P Y+A
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
L+ G+ G LK A ++ EM + + PD TY++L+DA G+ A+ +L M
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
V+P+ +S L+ G+ E K V M GV P+ Q YN++I K +D A+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
+ M E I P++VT+++LID CK G+ A E+ + M RG TYN +++
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
D L+ K+ +GI P++ T+ L+D K GR DA E +++ G ++
Sbjct: 525 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
YN +IN + GL ++A+ M +G + ++I+A E + +A +L+
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQY 644
Query: 534 M 534
M
Sbjct: 645 M 645
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 225/488 (46%), Gaps = 2/488 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTA--ISLSRQMEITGITPNFVT 90
+++ ++ +M Q + ++ V+ SL ++ + + L +++E + +
Sbjct: 212 DIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQL 271
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
+N +I G + A +L G T T ++I L G+ A +++
Sbjct: 272 VNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELR 331
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
G + Y L+ G K G + A ++ +E RG+ P Y+ +ID+
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A + EM A + PN +S L+ GF G+ ++ +L EM + PD YN+++
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
D GK + A M+ +G++PD VT+++L+D +C A ++F AM RRG
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
P +YNIMI + D+ LL +M + I+PN VT+++L+D K+G+ ++A E
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
L+EM G YN+ ++A + ++ + + + G++P + N L++ +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
R +A V Q + + G + TY T++ L + F + + +M +GC D
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKA 691
Query: 511 FETIISAL 518
+ SAL
Sbjct: 692 RSMLRSAL 699
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 204/451 (45%), Gaps = 9/451 (1%)
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
+ILI+ LG++ + K+ P +T+N LI + + +AL +
Sbjct: 171 SILIHA---LGRSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAA--LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
G+Q D V Y+ +I L + + ++ L L + IE ++ V + N II K
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
S A L A G+S T ++I G+ +A L +E+ I P YN L
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ K G +++A++M++ M K+GV PD TYS L+D Y AR V M V
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
PN ++ ++ G + +L+EM + P++ Y+ +ID K + +A
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 390 LLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
D M G D +T+N+ +D CK G H+ + + + +G P TYNI+++
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI-VAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
R D + + + +G N T+ T+++ K G F++A+ + +M+ G
Sbjct: 525 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
Query: 509 ITFETIISALFEKGENDKAEKLLREMIARDL 539
+ +I+A ++G +++A R M + L
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 181/414 (43%), Gaps = 42/414 (10%)
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
++ Y+ LI+ L G++E E + + + P + YN +I + + + A +L +
Sbjct: 167 ELLYSILIHAL---GRSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIA 221
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQA--IGLLDEMVLKNIDPDVVTYNILVDALGK 275
+M G + V YS +I ++ + L E+ ++ DV N ++ K
Sbjct: 222 KMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAK 281
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
G +A +L + G+ T S++ +A +F + + G+ P ++
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA-------- 387
YN ++ G K + +A +++ EM+ + P++ TYS LID G+ +A
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 388 -----------------------W----ELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
W ++L EM G D YN +D K + +D
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ +++ +GI+PD T+N L+D CK GR A+E+F+ + ++G TYN MI
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
N + +D+ L+ KM+ G + + +T T++ + G + A + L EM
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+D + M + + P +N ++ + + A++ R M G+ P+ + LN L
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
IN + AF+VL + + G PD +T+ TL+K L K + +++++ G
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGC 685
Query: 155 QLDQVTYATLINGLCKMGQT 174
+ D+ + L + L M QT
Sbjct: 686 KPDRKARSMLRSALRYMKQT 705
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 213/428 (49%), Gaps = 6/428 (1%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N T L+ + + AF V I + G+ D +N L+ L K +A Q
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL---AKDEKACQVF 258
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
+D+ + + D+ TY +I + ++G+ + A+ L + G+ VV YNT++ L K
Sbjct: 259 EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
K+V A ++S M+ G PN TYS L+ GQL + G++ E+ + + + +Y
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY 377
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
LV L K G V EA + M VK + +Y S+++ C + +A ++ + +
Sbjct: 378 --LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
+GV + YN + L K+K + +L E+M + P+ TY+ LI + G+V
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
A + +E+ DII+YNS ++ L K VD+ K++ +KG+ PD+ TY+ L++
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 447 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
K R++ A +F+++ KG N TYN +++ L K G EA+ L SKM+ G
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
Query: 507 DPITFETI 514
D IT+ +
Sbjct: 616 DSITYTVL 623
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 188/340 (55%), Gaps = 3/340 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D+ V FN M+ +T ++ +N ++ L K K AI + +M TG PN T ++L
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+N GQ V+ I KR Y I ++ L++ L G + A + D+ +
Sbjct: 347 LNLLVAEGQLVRLDGVV-EISKR-YMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ ++ +Y +++ LC G+T A+E+L +I +G+ +MYNT+ +L K+K +SH D
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L+ +M G SP++ TY+ LI F VG++ +AI + +E+ + PD+++YN L++ LG
Sbjct: 464 LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
K G V EA M ++G+ PDVVTYS+LM+ + V A +F M +G PN+
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
+YNI++ L K EA++L +M + + P+ +TY+ L
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 200/395 (50%), Gaps = 12/395 (3%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
I +N +L +L K + A + M+ + T I+I +G+ A +
Sbjct: 238 IFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
++ G + + +NTL++ L + +A+Q ++ G + ++ TY+ L+N L G
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Query: 173 QT---EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
Q + +E+ +R +GI Y+ ++ +L K+ VS A L+ +M + +
Sbjct: 355 QLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
+Y +++ C G+ +AI +L ++ K + D + YN + ALGK ++ ++ M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
K G PD+ TY+ L+ + V EV++A ++F + R P++ SYN +I L K V
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
DEA +EM + + P+ VTYS+L++ KT +V A+ L +EM V+G +I+TYN
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
LD L K + + L K+ +G+ PD TY +L
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 207/430 (48%), Gaps = 11/430 (2%)
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
S+L +++K H + T N LI L L+ V +++ TY L+
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCLLQAY 213
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNV 228
+ A ++ I G K + YN ++D+L K + F+ +M + +
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFE---DMKKRHCRRDE 270
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAV 288
TY+ +I +G+ +A+GL +EM+ + + +VV YN L+ L K V +A + +
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKAR-DVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M++ G +P+ TYS L++ LV E R D +++R +T + SY ++ L K+
Sbjct: 331 MVETGCRPNEYTYSLLLN--LLVAEGQLVRLDGVVEISKRYMTQGIYSY--LVRTLSKLG 386
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
V EA L +M + + +Y S+++ LC GK A E+L ++H +G D + YN
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 467
+ AL K + L +K+ G PD+ TYNIL+ + G + +A +F++L +
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 468 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
+ +YN++IN L K G DEA +M++ G D +T+ T++ + + A
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 528 EKLLREMIAR 537
L EM+ +
Sbjct: 567 YSLFEEMLVK 576
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 229/490 (46%), Gaps = 18/490 (3%)
Query: 56 FNKVLTSLVKTK---HYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
+N+++ L ++ + S+ M + + N T+NILI + G T L
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIG---FFGNTEDLQMCLR 192
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
+ K ++ T+ L++ +A + ++ G +LD Y L++ L K
Sbjct: 193 LVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK-- 250
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
E A ++ ++ R + Y +I ++ ++ A L++EMI +G++ NVV Y+
Sbjct: 251 -DEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYN 309
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAV---M 289
L+ + +AI + MV P+ TY++L++ L EG++ ++ +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY 369
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ QG+ YS L+ + V++A +F M V SY M+ LC
Sbjct: 370 MTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
EA+ +L ++ + ++ + + Y+++ L K ++S+ +L ++M G DI TYN
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+ + + VD+ I + +++ +PD+ +YN L++ L K G + +A F+++ +KG
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
N + TY+T++ K + A +L +M GC + +T+ ++ L + G +A
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVD 603
Query: 530 LLREMIARDL 539
L +M + L
Sbjct: 604 LYSKMKQQGL 613
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD+ ++ F + + P II +N ++ L K A ++M+ G+ P+ VT +
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ C + A+S+ +L +G P+ +T+N L+ L +G+ A+ + + QG
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 154 FQLDQVTYATL 164
D +TY L
Sbjct: 613 LTPDSITYTVL 623
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+VD+ F M + + P ++ ++ ++ KT+ A SL +M + G PN VT N
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCL-HGK 138
IL++C G+T A + + + ++G PD+IT+ L + + HGK
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGK 633
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 1/377 (0%)
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
L+N L K T+ ++ +++ G+ + +YN ++ + K A L SEM KG
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
+ P++ TY+ LI +C +A+ + D M + P++VTYN + +EG++REA
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
+ IK V + VTY++L+DGYC +N++++A + M RG +P V +YN ++ L
Sbjct: 294 RLFR-EIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
C+ + EA LL EM +KI P+ +T ++LI+ CK + +A ++ +M G D+
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
+Y + + CK ++ + +I+KG P TY+ L+DG + + ++ ++
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
K+G + Y +I +CK D A L ME G + D + F T+ A + G+
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 524 NDKAEKLLREMIARDLL 540
+A L M R L+
Sbjct: 533 VTEASALFDVMYNRRLM 549
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 190/378 (50%), Gaps = 9/378 (2%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D F +M+++ + I +N ++ + K+ A L +ME G+ P+ T N L
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL----QFHDDVL 150
I+ +C A SV + + G P+ +T+N+ I G G++ A + DDV
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVT 304
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
A + VTY TLI+G C+M + AL L +E RG P VV YN+I+ LC+ +
Sbjct: 305 A-----NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIR 359
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A L +EM K I P+ +T + LI +C + + A+ + +M+ + D+ +Y L+
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
K ++ AK L MI++G P TYS L+DG+ N+ ++ + +RG+
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+V Y +I +CK++ VD A L E M+ + ++ + V ++++ +TGKV+ A L
Sbjct: 480 ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Query: 391 LDEMHVRGQPADIITYNS 408
D M+ R ++ Y S
Sbjct: 540 FDVMYNRRLMVNLKLYKS 557
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 198/408 (48%), Gaps = 1/408 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D++ F ++ + P + +L SLVK + T + ++M G+ N N+
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ G A +L+ + ++G PD T+NTLI C AL D + G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ VTY + I+G + G+ A L R I+ + V Y T+ID C++ + A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L M ++G SP VVTY++++ C G++++A LL EM K I+PD +T N L++A
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAY 387
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K + A + MI+ G+K D+ +Y +L+ G+C V E+ A++ +M +G +P
Sbjct: 388 CKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+Y+ ++ G DE LLEE + + + Y LI +CK +V A L +
Sbjct: 448 ATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFES 507
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
M +G D + + + A + V + AL + ++ + ++ Y
Sbjct: 508 MEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 199/417 (47%), Gaps = 1/417 (0%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
F+ ++ K + +I + Q+ G+ P+ +L+N T + + + ++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
K G + +N L+ G +A + ++ +G D TY TLI+ CK
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
AL + R+E G+ P +V YN+ I + + A L+ E I ++ N VTY+ LI
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLI 314
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G+C + + +A+ L + M + P VVTYN ++ L ++G++REA +L M + ++
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
PD +T ++L++ YC + ++ A V M G+ ++ SY +I+G CK+ ++ A
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
L M + P TYS L+DG K +LL+E RG AD+ Y + +CK
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICK 494
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
VD L + + KG+ D + + + G++ +A +F ++ + +N
Sbjct: 495 LEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
R ++ +T + + ++ + A+ L ME G +P VT N ++ C G
Sbjct: 297 REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ A +L + + PD IT NTLI C + A++ ++ G +LD +Y
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
LI+G CK+ + E A E L + +G P Y+ ++D L E +
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G+ +V Y LI C + Q+ A L + M K + D V + + A + GKV EA
Sbjct: 477 GLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEV 314
+ VM + + ++ Y S+ Y N+V
Sbjct: 537 SALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D+ + M +P ++ +N +L L + A L +M I P+ +T N
Sbjct: 322 DIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCN 381
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN +C + SA V +++ G D ++ LI G C +L A + ++ +
Sbjct: 382 TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK 441
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF TY+ L++G + + +LL E RG+ V +Y +I +CK++ V +A
Sbjct: 442 GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA 501
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
L+ M KG+ + V ++ + Y + G++ +A L D M
Sbjct: 502 KVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
+MIY K M+++++ + E++ + P+ + L++ L K W++ +M
Sbjct: 139 LMIY-YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKL 197
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC------ 451
G A+I YN + A K +K L+ ++ +KG+ PD+ TYN L+ CK
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 452 -----------------------------GRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
GR+++A +F+++ K N+ TY T+I+G
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDG 316
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
C+ DEAL L ME G +T+ +I+ L E G +A +LL EM + +
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL------------- 378
++QS MI L K K A LL+++ +++ + + SL+ G+
Sbjct: 79 SLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSW 138
Query: 379 -----CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
K G ++++ + +++ G + L++L K D + KK++ G
Sbjct: 139 LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLG 198
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 493
+ ++ YN+L+ K G + A+++ ++ +KG + +TYNT+I+ CK+ + EAL
Sbjct: 199 VVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEAL 258
Query: 494 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
++ +ME +G + +T+ + I +G +A +L RE+
Sbjct: 259 SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 240/511 (46%), Gaps = 42/511 (8%)
Query: 67 KHYSTAISLSRQM-EITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTIT 125
+ + T L +M + G+ P+ +I SV+ + K G P
Sbjct: 90 RRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKV 149
Query: 126 FNTLIKGLCLHG-KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
FN+++ L + R F ++A G D TY L+ GL + +LL+ +
Sbjct: 150 FNSILDVLVKEDIDIAREF-FTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIM 208
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
+ G+ P V+YNT++ +LCK V A L SEM PN VT++ LI +C +L
Sbjct: 209 KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKL 264
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
Q++ LL++ PDVVT +++ L EG+V EA +L + +G K DVV ++L
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+ GYC + ++ A+ F M R+G PNV++YN++I G C + M+D AL+ +M + I
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMH-------VRGQPADIITY-----NSFLDA 412
N T+++LI GL G+ + ++L+ M R P + + Y N + DA
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDA 444
Query: 413 L--------CKGHHVDKGIALIK---------------KIIDKGIQPDMCTYNILLDGLC 449
L VD+ LI ++I +G P + + L+
Sbjct: 445 LEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYS 504
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 509
+ G+I+++ E+ D+ +GY + T+N +I G CK+ + + M + GC+ D
Sbjct: 505 QHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTE 564
Query: 510 TFETIISALFEKGENDKAEKLLREMIARDLL 540
++ ++ L KG+ KA L M+ + ++
Sbjct: 565 SYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 225/486 (46%), Gaps = 8/486 (1%)
Query: 38 VSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
+S + + + I P + FN +L LVK +R+M +GI + T IL+
Sbjct: 132 ISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKG 191
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
+ F +L + G P+ + +NTL+ LC +GK+ RA ++++ + +
Sbjct: 192 LSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA----RSLMSEMKEPN 247
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
VT+ LI+ C + ++ LL + G P VV +++ LC VS A ++
Sbjct: 248 DVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLE 307
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
+ +KG +VV + L+ G+C +G+++ A EM K P+V TYN+L+ G
Sbjct: 308 RVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVG 367
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT--PNVQS 335
+ A + M ++ + T+++L+ G + + + M +
Sbjct: 368 MLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP 427
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
YN +IYG K ++AL L +M EK+ P V S + LC+ G + + D+M
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
G II + + + +++ + LI ++ +G P T+N ++ G CK ++
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
+ + +D+ ++G + +YN ++ LC +G +A L S+M + + DP + +++
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Query: 516 SALFEK 521
L +K
Sbjct: 606 FCLSQK 611
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 151/345 (43%), Gaps = 40/345 (11%)
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILVDALGKEGKVREAKNMLAV 288
TY AL + C+ + LLDEM + PD + ++ G+ ++ +++ +
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 289 MIKQGVKP-----------------------------------DVVTYSSLMDGYCLVNE 313
+ K G+KP DV TY LM G L N
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
+ + M GV PN YN +++ LCK V A +L+ EM PN VT++
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNI 253
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
LI C K+ + LL++ G D++T ++ LC V + + +++++ KG
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 493
+ D+ N L+ G C G+++ AQ F ++ +KGY N TYN +I G C G+ D AL
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSAL 373
Query: 494 TLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
+ M+ + + TF T+I L G D K+L M D
Sbjct: 374 DTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR-GQPADIITYNSFLDALCKGHHV 419
+ I ++ TY +L LC + ++LLDEM G P D + + + + +
Sbjct: 69 FPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLI 128
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF-QDLFKKGYNLNNWTYNT 478
+ I+++ + GI+P + +N +LD L K I A+E F + + G + + +TY
Sbjct: 129 KRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGI 187
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
++ GL + L+ M+ +G + + + T++ AL + G+ +A L+ EM
Sbjct: 188 LMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 209/412 (50%), Gaps = 7/412 (1%)
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
T N + LC L RA D + G D +TY TLI G + + A +
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
RR+ GI+P V YN++I K +++ L+ EM+ G+SP++ +Y+ L+ + +
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 242 GQLKQAIGLLDEMV-LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
G+ +A +L E + L + P + TYNIL+DAL K G A + +K VKP+++T
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMT 190
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
Y+ L++G C V + + + G TPN +Y M+ K K +++ L L +M
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG-QPADIITYNSFLDALCKGHHV 419
E + +++ L KTG+ A+E + E+ G + DI++YN+ L+ K ++
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
D L+++I KG++PD T+ I+++GL G A++ + + G + T N +
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
I+GLCK G D A+ L + ME + D T+ +++ L + G A KLL
Sbjct: 371 IDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
NI V++L K + A+ +L I+ GV PDV+TY++L+ GY +++A V M
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
G+ P+V +YN +I G K M++ L L +EM + + P+ +Y++L+ K G+
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 387 AWELLDE-MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A+++L E +H+ G I TYN LDALCK H D I L K + + ++P++ TYNIL+
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILI 195
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
+GLCK R+ + ++L K GY N TY TM+ K ++ L L KM+ G
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMI 535
D ++SAL + G ++A + + E++
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELV 285
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 205/430 (47%), Gaps = 7/430 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
N + SL K ++ A +L G+ P+ +T N LI + A++V +
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G PD T+N+LI G + L+R LQ D++L G D +Y TL++ K+G+
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 176 AALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
A ++L I G+ P + YN ++D+LCK +A +L+ + ++ + P ++TY+ L
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNIL 194
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
I G C ++ ++ E+ P+ VTY ++ K ++ + + M K+G
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV-TPNVQSYNIMIYGLCKIKMVDEAL 353
D +++ +A + + + R G + ++ SYN ++ K +D
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
+LLEE++ + + P+ T++ +++GL G A + L + G ++T N +D L
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
CK HVD+ + L + + D TY ++ LCK GR+ A ++ + KG + +
Sbjct: 375 CKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 430
Query: 474 WTYNTMINGL 483
+++G+
Sbjct: 431 SARRAVLSGI 440
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 184/378 (48%), Gaps = 7/378 (1%)
Query: 165 INGLCKMGQTEAALELLRRIEG--RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
+N LCK E A LL I+G G+ P V+ YNT+I + + A+ + M
Sbjct: 20 VNSLCKFRNLERAETLL--IDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREA 77
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
GI P+V TY++LI G L + + L DEM+ + PD+ +YN L+ K G+ EA
Sbjct: 78 GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 283 KNMLAVMIK-QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
+L I G+ P + TY+ L+D C + A ++F + R V P + +YNI+I
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILIN 196
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
GLCK + V ++ E+ PN VTY++++ KT ++ +L +M G
Sbjct: 197 GLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP-DMCTYNILLDGLCKCGRIKDAQEV 460
D + + AL K ++ + +++ G + D+ +YN LL+ K G + ++
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDL 316
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
+++ KG +++T+ ++NGL G A ++ + + G +T +I L +
Sbjct: 317 LEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCK 376
Query: 521 KGENDKAEKLLREMIARD 538
G D+A +L M RD
Sbjct: 377 AGHVDRAMRLFASMEVRD 394
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 181/367 (49%), Gaps = 7/367 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ + RM + I P + +N +++ K + + L +M +G++P+ + N
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 94 LINCHCYLGQTTSAFSVL-ANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L++C+ LG+ AF +L +I G P T+N L+ LC G A++ L
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH-LKS 182
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ + +TY LINGLCK + + ++R ++ G P V Y T++ K K +
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI-DPDVVTYNILVD 271
L+ +M +G + + A++ G+ ++A + E+V D+V+YN L++
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
K+G + ++L + +G+KPD T++ +++G + A + G+ P
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+V + N +I GLCK VD A+ L M+ + ++ TY+S++ LCK G++ A +LL
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLL 418
Query: 392 DEMHVRG 398
+ +G
Sbjct: 419 LSCYNKG 425
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 166/319 (52%), Gaps = 5/319 (1%)
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
GIS ++ S + C L++A LL + + + PDV+TYN L+ + + EA
Sbjct: 10 GISTKLLNIS--VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ M + G++PDV TY+SL+ G +N+ +F+ M G++P++ SYN ++
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 343 LCKIKMVDEALNLL-EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
K+ EA +L E++ ++P TY+ L+D LCK+G NA EL + R +P
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKP- 186
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
+++TYN ++ LCK V +++++ G P+ TY +L K RI+ ++F
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC-IHDPITFETIISALFE 520
+ K+GY + + +++ L K G +EA M ++ +G D +++ T+++ F+
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306
Query: 521 KGENDKAEKLLREMIARDL 539
G D + LL E+ + L
Sbjct: 307 DGNLDAVDDLLEEIEMKGL 325
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
I+ +N +L K + L ++E+ G+ P+ T I++N +G T A LA
Sbjct: 294 IVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLA 353
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
I + G P +T N LI GLC G + RA++ + + D+ TY ++++ LCK G
Sbjct: 354 CIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDG 409
Query: 173 QTEAALELLRRIEGRGIK 190
+ A +LL +G+K
Sbjct: 410 RLVCASKLLLSCYNKGMK 427
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 181/348 (52%), Gaps = 9/348 (2%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D++ F++M P + VL LV+ + A + M G+ P +LN+LI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 96 NCHCYL-GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
C G + + + KRG PD+ T+ TLI GLC G++ A + +++ +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
VTY +LINGLC + A+ L ++ +GI+P V Y++++D LCK A +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L+ M+A+G PN+VTY+ LI G C ++++A+ LLD M L+ + PD Y ++
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTY-------SSLMDGYCLVNEVNKARDVFNAMARR 327
K REA N L MI G+ P+ +T+ + ++ G C N ++A ++ +M R
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR 402
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
G++ V++ ++ LCK +A+ L++E+ + IP+K T+ LI
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 30/344 (8%)
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLH-GKLHRALQFHDDVLAQGFQLDQVTY 161
Q AF N+ + G P + N LIK LC + G + L+ ++ +G D TY
Sbjct: 136 QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTY 195
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
TLI+GLC+ G+ + A +L + + PTVV Y ++I+ LC K V A EM +
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
KGI PNV TYS+L+ G C G+ QA+ L + M+ + P++VTY L+ L KE K++E
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 282 AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
A +L M QG+KPD Y ++ G+C +++ +A + + M G+TPN ++NI +
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
T + ++ GLC S A+ L M RG
Sbjct: 376 ----------------------------TSNEVVRGLC-ANYPSRAFTLYLSMRSRGISV 406
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
++ T S + LCK K + L+ +I+ G P T+ +L+
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 210/427 (49%), Gaps = 20/427 (4%)
Query: 124 ITFNTLIKGLCLHGKLHRALQFHDDVLAQ---GFQLDQVTYATLINGLCKMGQTEAALEL 180
IT + +IK + + +++ D A+ G+ DQ ++ ++ L + +AA +L
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCK-VKLVSHAFD---LYSEMIAKGISPNVVTYSALIY 236
+ R++ I+ VV + ++ S+C+ V FD ++ +M P+ Y ++
Sbjct: 74 IVRMK---IENCVVSEDILL-SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK-EGKVREAKNMLAVMIKQGVK 295
QL A M + P V + N+L+ AL + +G V + M K+G
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
PD TY +L+ G C +++A+ +F M + P V +Y +I GLC K VDEA+
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
LEEM + I PN TYSSL+DGLCK G+ A EL + M RG +++TY + + LCK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG------- 468
+ + + L+ ++ +G++PD Y ++ G C + ++A ++ G
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
+N++ T N ++ GLC A TL M G + T E+++ L +KGE KA
Sbjct: 370 WNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAV 428
Query: 529 KLLREMI 535
+L+ E++
Sbjct: 429 QLVDEIV 435
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 205/426 (48%), Gaps = 10/426 (2%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
GY D +F ++ L K A + + + + ++ G ++ + +
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
L + +++ P+ Y T++ L + ++ AF Y M G+ P V + + LI
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 238 FCIV-GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
C G + + + EM + DPD TY L+ L + G++ EAK + M+++ P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
VVTY+SL++G C V++A M +G+ PNV +Y+ ++ GLCK +A+ L
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
E M PN VTY++LI GLCK K+ A ELLD M+++G D Y + C
Sbjct: 286 EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAI 345
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNI-------LLDGLCKCGRIKDAQEVFQDLFKKGY 469
+ + ++I GI P+ T+NI ++ GLC A ++ + +G
Sbjct: 346 SKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGI 404
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG-ENDKAE 528
++ T +++ LCK+G F +A+ L+ ++ +GCI T++ +I +K + ++
Sbjct: 405 SVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASD 464
Query: 529 KLLREM 534
LLR++
Sbjct: 465 TLLRDL 470
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 8/260 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ F M++ P ++ + ++ L +K+ A+ +M+ GI PN T +
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ C G++ A + ++ RG P+ +T+ TLI GLC K+ A++ D + QG
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN-------TIIDSLCKV 206
+ D Y +I+G C + + A L + GI P + +N ++ LC
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-A 386
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
S AF LY M ++GIS V T +L+ C G+ ++A+ L+DE+V P T+
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Query: 267 NILVDALGKEGKVREAKNML 286
+L+ + V EA + L
Sbjct: 447 KLLIGHTLDKTIVGEASDTL 466
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
VD + F M + P + +++ L + A L +M P VT
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LIN C A L + +G P+ T+++L+ GLC G+ +A++ + ++A+
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + + VTY TLI GLCK + + A+ELL R+ +G+KP +Y +I C + A
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 213 FDLYSEMIAKGISPNVVTY-------SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
+ EMI GI+PN +T+ + ++ G C +A L M + I +V T
Sbjct: 352 ANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVET 410
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
LV L K+G+ ++A ++ ++ G P T+ L+
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMI---YGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
NK + + + R + V S +I++ G ++ ++L + +M P++
Sbjct: 64 ANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKA 123
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH-HVDKGIALIKKI 429
Y +++ L + +++ A++ M G P + + N + ALC+ VD G+ + ++
Sbjct: 124 YVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM 183
Query: 430 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 489
+G PD TY L+ GLC+ GRI +A+++F ++ +K TY ++INGLC
Sbjct: 184 PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNV 243
Query: 490 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
DEA+ + +M+ G + T+ +++ L + G + +A +L M+AR
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 313 EVNKARDVFNAMARR---GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV 369
+V K+ VF++ G + S+ M+ L A +L+ M E + ++
Sbjct: 28 DVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSED 87
Query: 370 TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKI 429
S+ G + + ++ + +M Y + L L + + ++ K +
Sbjct: 88 ILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM 147
Query: 430 IDKGIQPDMCTYNILLDGLCKC-GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
+ G+ P + + N+L+ LC+ G + ++F ++ K+G + +++TY T+I+GLC+ G
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
DEA L ++M + C +T+ ++I+ L D+A + L EM ++ +
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 203/417 (48%), Gaps = 36/417 (8%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D V + L+ G K+G E + R + G +VV N +++ L K+ L+ + +Y
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
S M GI PN T++ L FC ++ L++M + +PD+VTYN LV + +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
G+++EA + +M ++ V PD+VTY+SL+ G C V +A F+ M RG+ P+ SY
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG------------------- 377
N +IY CK M+ ++ LL EM ++P++ T +++G
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 378 ----------------LCKTGKVSNAWELLDE-MHVRGQPADIITYNSFLDALCKGHHVD 420
LC+ GK A LLD + G A TYN+ +++L + ++
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ + L K+ ++ D TY L+ LC+ GR ++A+ + ++F +++ ++
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALV 524
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
G CKE FD+A L+S I DP ++ +++ A+ E G K L+E + R
Sbjct: 525 YGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQR 581
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 205/440 (46%), Gaps = 5/440 (1%)
Query: 52 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVL 111
P++ F+ ++ +K + R++ +G + + VT N L+N L + V
Sbjct: 166 PVV-FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 112 ANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKM 171
+ + + G HP+T TFN L C F + + +GF+ D VTY TL++ C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 172 GQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
G+ + A L + + R + P +V Y ++I LCK V A + M+ +GI P+ ++Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ LIY +C G ++Q+ LL EM+ ++ PD T ++V+ +EG++ A N + + +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA-MARRGVTPNVQSYNIMIYGLCKIKMVD 350
V L+ C + A+ + + + G ++YN +I L + ++
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EAL L ++ + + + TY +LI LC+ G+ A L+ EM D + +
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALV 524
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK--CGRIKDAQEVFQDLFKKG 468
CK DK L+ + D +YN L+ +C+ CG K A E+ + + + G
Sbjct: 525 YGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCG-YKKALELQERMQRLG 583
Query: 469 YNLNNWTYNTMINGLCKEGL 488
+ N T +I L + L
Sbjct: 584 FVPNRLTCKYLIQVLEQPSL 603
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 185/417 (44%), Gaps = 37/417 (8%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D ++ M ++ I P FN + ++ +ME G P+ VT N
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ +C G+ AF + + +R PD +T+ +LIKGLC G++ A Q ++ +G
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D ++Y TLI CK G + + +LL
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLH------------------------------- 365
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
EM+ + P+ T ++ GF G+L A+ + E+ +D + L+ +L
Sbjct: 366 ----EMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSL 421
Query: 274 GKEGKVREAKNMLAVMI-KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+EGK AK++L +I ++G + TY++L++ + + +A + + + +
Sbjct: 422 CQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLD 481
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
++Y +I LC+I EA +L+ EM ++ P+ +L+ G CK A LL
Sbjct: 482 AKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLS 541
Query: 393 EMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
+ + D +YNS + A+C+ G K + L +++ G P+ T L+ L
Sbjct: 542 LFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 136/280 (48%), Gaps = 17/280 (6%)
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
P+V Y +L+ L K A L +I+ K + EV+ R +
Sbjct: 111 PNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKE---------------EVDVFRVL 155
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
+A P V +++++ G K+ +V+E + E+ + VT + L++GL K
Sbjct: 156 VSATDECNWDPVV--FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLK 213
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCT 440
+ + W++ M G + T+N + C + + ++K+ ++G +PD+ T
Sbjct: 214 LDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVT 273
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
YN L+ C+ GR+K+A +++ ++++ + TY ++I GLCK+G EA +M
Sbjct: 274 YNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
D G D +++ T+I A ++G +++KLL EM+ ++
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 201/397 (50%), Gaps = 5/397 (1%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSR-QMEITGITPNFVTLNI 93
+ ++ F R+ + + N +L L++ + + ++ + E GITPN T N+
Sbjct: 137 ESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNL 196
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ C SA+ VL I G P+ +T+ T++ G G + A + +++L +G
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D TY L++G CK+G+ A ++ +E I+P V Y +I +LCK K A
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+++ EM+ + P+ +I C ++ +A GL +M+ N PD + L+ L
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
KEG+V EA+ + ++G P ++TY++L+ G C E+ +A +++ M R PN
Sbjct: 377 CKEGRVTEARKLFD-EFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNA 435
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
+YN++I GL K V E + +LEEM PNK T+ L +GL K GK +A +++
Sbjct: 436 FTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS- 494
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
M V D ++ FL +DKG+ +K+++
Sbjct: 495 MAVMNGKVDKESWELFLKKF--AGELDKGVLPLKELL 529
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 210/411 (51%), Gaps = 5/411 (1%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI- 184
F L++ L G+ +++ + G + + TL+N L + + + + +
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
E GI P + N ++ +LCK + A+ + E+ + G+ PN+VTY+ ++ G+ G +
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
+ A +L+EM+ + PD TY +L+D K G+ EA ++ M K ++P+ VTY +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+ C + +AR++F+ M R P+ +I LC+ VDEA L +M
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
+P+ S+LI LCK G+V+ A +L DE +G ++TYN+ + +C+ + +
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
L + ++ +P+ TYN+L++GL K G +K+ V +++ + G N T+ + GL
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
K G ++A+ ++S NG + D ++E + GE DK L+E++
Sbjct: 482 KLGKEEDAMKIVSMAVMNGKV-DKESWELFLKKF--AGELDKGVLPLKELL 529
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 138/275 (50%), Gaps = 1/275 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+++ + + M + P ++ + +L V +A + +M G P+ T
Sbjct: 206 DIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYT 265
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+L++ +C LG+ + A +V+ ++ K P+ +T+ +I+ LC K A D++L +
Sbjct: 266 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER 325
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
F D +I+ LC+ + + A L R++ P + +T+I LCK V+ A
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L+ E KG P+++TY+ LI G C G+L +A L D+M + P+ TYN+L++
Sbjct: 386 RKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
L K G V+E +L M++ G P+ T+ L +G
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 126/245 (51%), Gaps = 1/245 (0%)
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
G+ P++ T + L+ C N++ A V + + G+ PN+ +Y ++ G ++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
+LEEM P+ TY+ L+DG CK G+ S A ++D+M + +TY + A
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
LCK + + +++++ PD ++D LC+ ++ +A +++ + K +
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
N +T+I+ LCKEG EA L + E G I +T+ T+I+ + EKGE +A +L
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 533 EMIAR 537
+M R
Sbjct: 425 DMYER 429
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 166/310 (53%), Gaps = 1/310 (0%)
Query: 69 YSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNT 128
+ T SL +M I P+ T I+ + G+ A + N+ + G D +FNT
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 129 LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG 188
++ LC ++ +A + L F +D VTY ++NG C + +T ALE+L+ + RG
Sbjct: 167 ILDVLCKSKRVEKAYELFR-ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
I P + YNT++ + + HA++ + EM + +VVTY+ +++GF + G++K+A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
+ DEM+ + + P V TYN ++ L K+ V A M M+++G +P+V TY+ L+ G
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
E ++ ++ M G PN Q+YN+MI + V++AL L E+M +PN
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 369 VTYSSLIDGL 378
TY+ LI G+
Sbjct: 406 DTYNILISGM 415
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 203/406 (50%), Gaps = 19/406 (4%)
Query: 58 KVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKR 117
K++ S T H LS + T TPN V ++L + + F L N R
Sbjct: 30 KLILSSPNTTHQDDQFLLS--TKTTPWTPNLVN-SVLKRLWNHGPKALQFFHFLDN-HHR 85
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV-------TYATLINGLCK 170
Y D +F+ I + +LH H V + ++ + T+A +
Sbjct: 86 EYVHDASSFDLAID---IAARLH----LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYAS 138
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G+ + A++L + G + +NTI+D LCK K V A++L+ + + S + VT
Sbjct: 139 AGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVT 197
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+ ++ G+C++ + +A+ +L EMV + I+P++ TYN ++ + G++R A M
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K+ + DVVTY++++ G+ + E+ +AR+VF+ M R GV P+V +YN MI LCK V+
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
A+ + EEM PN TY+ LI GL G+ S EL+ M G + TYN +
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
+ V+K + L +K+ P++ TYNIL+ G+ R +D
Sbjct: 378 RYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 169/345 (48%), Gaps = 1/345 (0%)
Query: 196 YNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
++ ID ++ L + L M + I P+ T++ + + G+ +A+ L M
Sbjct: 94 FDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH 153
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
D+ ++N ++D L K +V +A + + + D VTY+ +++G+CL+
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTP 212
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
KA +V M RG+ PN+ +YN M+ G + + A EM + VTY++++
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
G G++ A + DEM G + TYN+ + LCK +V+ + + ++++ +G +
Sbjct: 273 HGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 332
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
P++ TYN+L+ GL G +E+ Q + +G N TYN MI + ++AL L
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
KM C+ + T+ +IS +F + ++ + A+++L
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEIL 437
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
S +RM +RI P F V A+ L M G + + N +++
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
C + A+ + + R + DT+T+N ++ G CL + +AL+ +++ +G +
Sbjct: 172 CKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
TY T++ G + GQ A E ++ R + VV Y T++ + A +++ E
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
MI +G+ P+V TY+A+I C ++ A+ + +EMV + +P+V TYN+L+ L G+
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+ ++ M +G +P+ TY+ ++ Y +EV KA +F M PN+ +YNI
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 339 MIYGL 343
+I G+
Sbjct: 411 LISGM 415
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 1/273 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D V F M + + FN +L L K+K A L R + + + VT N++
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVI 201
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+N C + +T A VL +++RG +P+ T+NT++KG G++ A +F ++ +
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
++D VTY T+++G G+ + A + + G+ P+V YN +I LCK V +A
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
++ EM+ +G PNV TY+ LI G G+ + L+ M + +P+ TYN+++
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+ +V +A + M P++ TY+ L+ G
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 3/233 (1%)
Query: 310 LVNEVNKARDVFNAM--ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
L N KA F+ + R + S+++ I ++ + +L+ M +I P+
Sbjct: 66 LWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 125
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
T++ + + GK A +L MH G D+ ++N+ LD LCK V+K L +
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+ + D TYN++L+G C R A EV +++ ++G N N TYNTM+ G + G
Sbjct: 186 ALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
A +M+ C D +T+ T++ GE +A + EMI +L
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M++ I P + +N +L + A +M+ + VT +++ G+
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
A +V +++ G P T+N +I+ LC + A+ ++++ +G++ + TY
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
LI GL G+ EL++R+E G +P YN +I + V A L+ +M +
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 224 ISPNVVTYSALIYGFCI 240
PN+ TY+ LI G +
Sbjct: 401 CLPNLDTYNILISGMFV 417
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 147/241 (60%)
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
IK VV+ I+D LCK +A +L++EM KGI PNV+TY+ +I FC G+ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
LL M+ K I+PD+VT++ L++A KE KV EA+ + M++ + P +TY+S++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C + V+ A+ + ++MA +G +P+V +++ +I G CK K VD + + EM I+ N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
VTY++LI G C+ G + A +LL+EM G D IT++ L LC + K A+++
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 429 I 429
+
Sbjct: 246 L 246
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 137/241 (56%)
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D V +++ LCK G A L + +GI P V+ YN +IDS C S A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L MI K I+P++VT+SALI F ++ +A + EM+ +I P +TYN ++D
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
K+ +V +AK ML M +G PDVVT+S+L++GYC V+ ++F M RRG+ N
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+Y +I+G C++ +D A +LL EM + P+ +T+ ++ GLC ++ A+ +L+++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 395 H 395
Sbjct: 247 Q 247
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 138/243 (56%)
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
I +VV +A++ C G A L EM K I P+V+TYN ++D+ G+ +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
+L MI++ + PD+VT+S+L++ + +V++A +++ M R + P +YN MI G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
CK VD+A +L+ M + P+ VT+S+LI+G CK +V N E+ EMH RG A+
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
+TY + + C+ +D L+ ++I G+ PD T++ +L GLC ++ A + +D
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 464 LFK 466
L K
Sbjct: 246 LQK 248
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 132/246 (53%)
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
M + +K DVV ++++D C A+++F M +G+ PNV +YN MI C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
+A LL M ++I P+ VT+S+LI+ K KVS A E+ EM ITYNS
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
+D CK VD ++ + KG PD+ T++ L++G CK R+ + E+F ++ ++G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
N TY T+I+G C+ G D A L+++M G D ITF +++ L K E KA
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 529 KLLREM 534
+L ++
Sbjct: 241 AILEDL 246
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 134/247 (54%)
Query: 254 MVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNE 313
M +I DVV +VD L K+G A+N+ M ++G+ P+V+TY+ ++D +C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
+ A + M + + P++ +++ +I K + V EA + +EM I P +TY+S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
+IDG CK +V +A +LD M +G D++T+++ ++ CK VD G+ + ++ +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 493
I + TY L+ G C+ G + AQ++ ++ G + T++ M+ GLC + +A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 494 TLMSKME 500
++ ++
Sbjct: 241 AILEDLQ 247
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 133/239 (55%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M Q I ++ ++ L K ++ A +L +M GI PN +T N +I+ C+ G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
+ A +L +++++ +PD +TF+ LI K+ A + + ++L +TY +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
+I+G CK + + A +L + +G P VV ++T+I+ CK K V + +++ EM +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
I N VTY+ LI+GFC VG L A LL+EM+ + PD +T++ ++ L + ++R+A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 131/239 (54%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
D + ++ LC G A ++ +G + +TY +I+ C G+ A +L
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
LR + + I P +V ++ +I++ K + VS A ++Y EM+ I P +TY+++I GFC
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
++ A +LD M K PDVVT++ L++ K +V + M ++G+ + VT
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
Y++L+ G+C V +++ A+D+ N M GV P+ +++ M+ GLC K + +A +LE++
Sbjct: 188 YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 116/216 (53%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
+ F M + I P ++ +N ++ S + +S A L R M I P+ VT + LIN
Sbjct: 31 NLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAF 90
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
+ + A + +L+ P TIT+N++I G C ++ A + D + ++G D
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDV 150
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
VT++TLING CK + + +E+ + RGI V Y T+I C+V + A DL +E
Sbjct: 151 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
MI+ G++P+ +T+ ++ G C +L++A +L+++
Sbjct: 211 MISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%)
Query: 79 MEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGK 138
M + I + V +++ C G +A ++ + ++G P+ +T+N +I C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 139 LHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNT 198
A Q ++ + D VT++ LIN K + A E+ + + I PT + YN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
+ID CK V A + M +KG SP+VVT+S LI G+C ++ + + EM +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
I + VTY L+ + G + A+++L MI GV PD +T+ ++ G C E+ KA
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 114/213 (53%)
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
M + + +V ++ LCK A NL EM + I PN +TY+ +ID C +G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
S+A +LL M + DI+T+++ ++A K V + + K+++ I P TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
++DG CK R+ DA+ + + KG + + T++T+ING CK D + + +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 504 CIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+ + +T+ T+I + G+ D A+ LL EMI+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 97/182 (53%)
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M I + V ++++D LCK G NA L EMH +G +++TYN +D+ C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
L++ +I+K I PD+ T++ L++ K ++ +A+E+++++ + TYN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
MI+G CK+ D+A ++ M GC D +TF T+I+ + D ++ EM R
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 539 LL 540
++
Sbjct: 181 IV 182
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D M++ +I P I+ F+ ++ + VK + S A + ++M I P +T N +I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ C + A +L ++ +G PD +TF+TLI G C ++ ++ ++ +G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ VTY TLI+G C++G +AA +LL + G+ P + ++ ++ LC K + AF +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 216 YSEM 219
++
Sbjct: 243 LEDL 246
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%)
Query: 15 NPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAIS 74
NP+ V + + ML+ I P I +N ++ K A
Sbjct: 77 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 136
Query: 75 LSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLC 134
+ M G +P+ VT + LIN +C + + + + +RG +T+T+ TLI G C
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 135 LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
G L A +++++ G D +T+ ++ GLC + A +L ++
Sbjct: 197 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 232/493 (47%), Gaps = 42/493 (8%)
Query: 84 ITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL 143
P+ N L+N C + + A ++ ++ RG+ PD +TF TLI G C +L A
Sbjct: 158 FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAH 217
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI------------------- 184
+ D++ G + + +T + LI G KM E +L++ +
Sbjct: 218 KVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFAN 277
Query: 185 ------------------EGRGIKPTV---VMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
E + +V Y +IDSLC+ + A + M +KG
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKG 337
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
+ P +Y+A+I+G C G +A LL+E P TY +L+++L KE +A+
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
N+L +M+++ Y+ + G C+++ + +V +M + P+ + N +I GL
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 344 CKIKMVDEALNLLEEMDYEKI-IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PA 401
CK+ VD+A+ +L++M K P+ VT ++++ GL G+ A ++L+ + +
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP 517
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
++ YN+ + L K H D+ +++ ++ + D TY I++DGLC ++ A++ +
Sbjct: 518 GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW 577
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
D+ + + Y + GLC+ G +A + + D+G I + + + T+I+
Sbjct: 578 DDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRS 637
Query: 522 GENDKAEKLLREM 534
G +A ++L EM
Sbjct: 638 GLKREAYQILEEM 650
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 219/469 (46%), Gaps = 52/469 (11%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
A +L + RGY PD++ +++I LC G+ A + LA GF D+ T +I
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 167 GLCKMGQTEAALELLRRIEG--RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
L + L ++ R+ G + P++ YN +++ LC + V A L +M +G
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH 193
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK- 283
P+VVT++ LI G+C + +L+ A + DEM + I P+ +T ++L+ K V +
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 284 -----------------------NMLAVMIKQGVKPDV----------------VTYSSL 304
N++ M ++G D+ Y +
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHM 313
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+D C + A + M +G+ P SYN +I+GLCK A LLEE +
Sbjct: 314 IDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEF 373
Query: 365 IPNKVTYSSLIDGLCK---TGKVSNAWELLDEMHVRGQPADIIT-YNSFLDALCKGHHVD 420
P++ TY L++ LCK TGK N EL+ +R + AD YN +L LC +
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLELM----LRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW-TYNTM 479
+ + ++ ++ +PD T N +++GLCK GR+ DA +V D+ + + T NT+
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 480 INGLCKEGLFDEALTLMSK-MEDNGCIHDPITFETIISALFEKGENDKA 527
+ GL +G +EAL ++++ M +N + + +I LF+ + D+A
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEA 538
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 210/471 (44%), Gaps = 42/471 (8%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC----------- 99
P ++ F ++ + + A + +M + GI PN +TL++LI
Sbjct: 195 PDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKL 254
Query: 100 ------YLGQTT------SAFSVLANILKR-GYHPD----------------TITFNTLI 130
Y+ T +AF+ L + + R GY D + +I
Sbjct: 255 MKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMI 314
Query: 131 KGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIK 190
LC + + H A + + ++G + + +Y +I+GLCK G A +LL
Sbjct: 315 DSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFF 374
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P+ Y +++SLCK A ++ M+ K + Y+ + G C++ + + +
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA-VMIKQGVKPDVVTYSSLMDGYC 309
L M+ + PD T N +++ L K G+V +A +L +M + PD VT +++M G
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL 494
Query: 310 LVNEVNKARDVFN-AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
+A DV N M + P V +YN +I GL K+ DEA+++ +++ + +
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADS 554
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
TY+ +IDGLC T KV A + D++ D Y +FL LC+ ++ +
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYD 614
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
+ D G P++ YN ++ + G ++A ++ +++ K G + T+ +
Sbjct: 615 LADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 189/423 (44%), Gaps = 45/423 (10%)
Query: 157 DQVTYATLINGLCKMGQT-EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D+ + I+ +C + + + AL +L + RG +P + +++I SLC A
Sbjct: 53 DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRR 112
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV--LKNIDPDVVTYNILVDAL 273
+ +A G P+ T + +I +G++ ++ K P + YN L++ L
Sbjct: 113 FLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQL 172
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
+V +A ++ M +G PDVVT+++L+ GYC + E+ A VF+ M G+ PN
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNS 232
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEM-DYEK----IIPNKVTYSSLIDGLCKTGKVSNAW 388
+ +++I G K++ V+ L++E+ +Y K +++L+D +C+ G ++ +
Sbjct: 233 LTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIF 292
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII-DKGIQPDMCTYN----- 442
E+ + M + Y +D+LC+ + + G A I I+ KG++P +YN
Sbjct: 293 EIAENMSLCESVNVEFAYGHMIDSLCR-YRRNHGAARIVYIMKSKGLKPRRTSYNAIIHG 351
Query: 443 ------------------------------ILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
+L++ LCK A+ V + + +K
Sbjct: 352 LCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADR 411
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
YN + GLC E L ++ M C D T T+I+ L + G D A K+L
Sbjct: 412 TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 533 EMI 535
+M+
Sbjct: 472 DMM 474
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 34 VDDTVSFFNRMLQMRI-TPPIIEFNKVLTSLVKTKHYSTAIS-LSRQMEITGITPNFVTL 91
VDD + + M+ + P + N V+ L+ A+ L+R M I P V
Sbjct: 463 VDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAY 522
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
N +I L + A SV + K D+ T+ +I GLC+ K+ A +F DDV+
Sbjct: 523 NAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIW 582
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+ D YA + GLC+ G A L + G P VV YNT+I + L
Sbjct: 583 PSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKRE 642
Query: 212 AFDLYSEMIAKGISPNVVTYSAL 234
A+ + EM G +P+ VT+ L
Sbjct: 643 AYQILEEMRKNGQAPDAVTWRIL 665
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 127/266 (47%), Gaps = 7/266 (2%)
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA +L + +G +PD + SS++ C ++A F G P+ ++ N++I
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 341 YGLCKIKMVDEALNLLEEM-DYEK-IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
L + L ++ + ++K +P+ Y+ L++ LC +V +A +L+ +M RG
Sbjct: 133 ARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRG 192
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
D++T+ + + C+ ++ + ++ GI+P+ T ++L+ G K ++ +
Sbjct: 193 HLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGR 252
Query: 459 EVFQDLFKKGYN-----LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
++ ++L++ N + + +++ +C+EG F++ + M ++ +
Sbjct: 253 KLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGH 312
Query: 514 IISALFEKGENDKAEKLLREMIARDL 539
+I +L N A +++ M ++ L
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGL 338
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 199/412 (48%), Gaps = 20/412 (4%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEF-NKVLTSLVKTKHYSTAISLSRQMEITGITPNF--- 88
N+ D S FN + P ++F N VL S + + L + I PNF
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQH--ILKSQPNFRPG 121
Query: 89 -VTLNILINCHCYLGQTT--SAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
T IL++ C ++ + VL ++ G PD +T + ++ LC G++ A
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNTIIDSLC 204
++ + D TY L+ LCK E + + + +KP +V + +ID++C
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
K + A L S++ G P+ Y+ ++ GFC + + +A+G+ +M + ++PD +
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
TYN L+ L K G+V EA+ L M+ G +PD TY+SLM+G C E A + M
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM 361
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
RG PN +YN +++GLCK +++D+ + L E M + Y++L+ L K+GKV
Sbjct: 362 EARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKV 421
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
+ A+E+ D +D Y++ ++ + +KK ++G+ P
Sbjct: 422 AEAYEVFDYAVDSKSLSDASAYST----------LETTLKWLKKAKEQGLVP 463
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 165/311 (53%), Gaps = 3/311 (0%)
Query: 154 FQLDQVTYATLINGLCKMGQTEAA--LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
F+ + T+ L++ C+ + + +L + G++P V + + SLC+ V
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILV 270
A DL E+ K P+ TY+ L+ C L +DEM ++ PD+V++ IL+
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
D + +REA +++ + G KPD Y+++M G+C +++ ++A V+ M GV
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
P+ +YN +I+GL K V+EA L+ M P+ TY+SL++G+C+ G+ A L
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
L+EM RG + TYN+ L LCK +DKG+ L + + G++ + Y L+ L K
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK 417
Query: 451 CGRIKDAQEVF 461
G++ +A EVF
Sbjct: 418 SGKVAEAYEVF 428
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ G+ P+ VT + C G++ +A L+ E+ K+ PD TYN L+ L K
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 279 VREAKNMLAVMIKQ-GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
+ + M VKPD+V+++ L+D C + +A + + + G P+ YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
++ G C + EA+ + ++M E + P+++TY++LI GL K G+V A L M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
G D TY S ++ +C+ ++L++++ +G P+ CTYN LL GLCK +
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
E+++ + G L + Y T++ L K G EA + D+ + D + T+ +
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETT 449
Query: 518 L 518
L
Sbjct: 450 L 450
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 172/340 (50%), Gaps = 17/340 (5%)
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAK--GISPNVVTYSALIYGFCIV--GQLKQAIGL 250
+N+++ S + +V+ L+ ++ P T+ L+ C + +
Sbjct: 87 FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRV 146
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
L+ MV ++PD VT +I V +L + G+V EAK+++ + ++ PD TY+ L+ C
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 311 VNE-------VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
+ V++ RD F+ V P++ S+ I+I +C K + EA+ L+ ++
Sbjct: 207 CKDLHVVYEFVDEMRDDFD------VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
P+ Y++++ G C K S A + +M G D ITYN+ + L K V++
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+K ++D G +PD TY L++G+C+ G A + +++ +G N+ TYNT+++GL
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
CK L D+ + L M+ +G + + T++ +L + G+
Sbjct: 381 CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGK 420
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 143/280 (51%), Gaps = 3/280 (1%)
Query: 258 NIDPDVVTYNILVD--ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
N P T+ IL+ + + +L +M+ G++PD VT + C V+
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSL 374
+A+D+ + + P+ +YN ++ LCK K + ++EM D + P+ V+++ L
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 375 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI 434
ID +C + + A L+ ++ G D YN+ + C + + + KK+ ++G+
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 435 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 494
+PD TYN L+ GL K GR+++A+ + + GY + TY +++NG+C++G AL+
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS 356
Query: 495 LMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
L+ +ME GC + T+ T++ L + DK +L M
Sbjct: 357 LLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMM 396
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 150/301 (49%), Gaps = 8/301 (2%)
Query: 244 LKQAIGLLDEMVLKNIDP-DVVTYNILVDALGKEGKVREAKNMLAVMIKQ--GVKPDVVT 300
L A L + + + P D+ +N ++ + G V + + ++K +P T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 301 YSSLMDGYCLV--NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
+ L+ C + ++ V N M G+ P+ + +I + LC+ VDEA +L++E
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH--VRGQPADIITYNSFLDALCKG 416
+ + P+ TY+ L+ LCK + +E +DEM +P D++++ +D +C
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP-DLVSFTILIDNVCNS 243
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
++ + + L+ K+ + G +PD YN ++ G C + +A V++ + ++G + TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
NT+I GL K G +EA + M D G D T+ ++++ + KGE+ A LL EM A
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 537 R 537
R
Sbjct: 364 R 364
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 187/378 (49%), Gaps = 28/378 (7%)
Query: 142 ALQFHDDVLA-QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMY---N 197
AL F D + F+ + +YA+L+ LC + I K T++M N
Sbjct: 43 ALSFSDWISRIPNFKHNVTSYASLVTLLCS-----------QEIPYEVPKITILMIKSCN 91
Query: 198 TIIDSL-----CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
++ D+L C+ +F++ ++ K Y+ L+ G +++ L
Sbjct: 92 SVRDALFVVDFCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYT 144
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
EM+ + PD+ T+N LV+ K G V EAK + +I+ G PD TY+S + G+C
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
EV+ A VF M + G N SY +IYGL + K +DEAL+LL +M + PN TY+
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYT 264
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
LID LC +G+ S A L +M G D Y + + C G +D+ L++ +++
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN 324
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
G+ P++ TYN L+ G CK + A + + ++ + TYNT+I G C G D A
Sbjct: 325 GLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 493 LTLMSKMEDNGCIHDPIT 510
L+S ME++G + + T
Sbjct: 384 YRLLSLMEESGLVPNQRT 401
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 146/273 (53%), Gaps = 1/273 (0%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
+N L+ L G + + + ++L D T+ TL+NG CK+G A + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
G P Y + I C+ K V AF ++ EM G N V+Y+ LIYG ++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+A+ LL +M N P+V TY +L+DAL G+ EA N+ M + G+KPD Y+ L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+C + +++A + M G+ PNV +YN +I G CK K V +A+ LL +M + ++
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
P+ +TY++LI G C +G + +A+ LL M G
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 142/269 (52%), Gaps = 1/269 (0%)
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
YN L+ +L + G V E K + M++ V PD+ T+++L++GYC + V +A+ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
+ G P+ +Y I G C+ K VD A + +EM N+V+Y+ LI GL + K+
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A LL +M ++ TY +DALC + + L K++ + GI+PD C Y +L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
C + +A + + + + G N TYN +I G CK+ + +A+ L+SKM + +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLV 361
Query: 506 HDPITFETIISALFEKGENDKAEKLLREM 534
D IT+ T+I+ G D A +LL M
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 152/291 (52%), Gaps = 3/291 (1%)
Query: 45 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQT 104
++ ++TP +N +L+SL + L +M ++P+ T N L+N +C LG
Sbjct: 114 IKYKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
A + +++ G PD T+ + I G C ++ A + ++ G ++V+Y L
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQL 231
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
I GL + + + AL LL +++ P V Y +ID+LC S A +L+ +M GI
Sbjct: 232 IYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI 291
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
P+ Y+ LI FC L +A GLL+ M+ + P+V+TYN L+ K+ V +A
Sbjct: 292 KPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMG 350
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+L+ M++Q + PD++TY++L+ G C ++ A + + M G+ PN ++
Sbjct: 351 LLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 133/271 (49%), Gaps = 9/271 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + ML+ ++P I FN ++ K + A + G P++ T
Sbjct: 136 VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTS 195
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL----QFHDDV 149
I HC + +AF V + + G H + +++ LI GL K+ AL + DD
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
+ TY LI+ LC GQ A+ L +++ GIKP MY +I S C +
Sbjct: 256 CCPNVR----TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
A L M+ G+ PNV+TY+ALI GFC + +A+GLL +M+ +N+ PD++TYN L
Sbjct: 312 DEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTL 370
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
+ G + A +L++M + G+ P+ T
Sbjct: 371 IAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 152/314 (48%), Gaps = 11/314 (3%)
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
NV +Y++L+ C ++ + + +++K+ N + DAL R +
Sbjct: 59 NVTSYASLVTLLC-SQEIPYEVPKITILMIKSC-------NSVRDALFVVDFCRTMRKGD 110
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
+ IK + P Y++L+ V + + ++ M V+P++ ++N ++ G CK+
Sbjct: 111 SFEIKYKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
V EA + + P+ TY+S I G C+ +V A+++ EM G + ++Y
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
+ L + +D+ ++L+ K+ D P++ TY +L+D LC G+ +A +F+ + +
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE 288
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
G ++ Y +I C DEA L+ M +NG + + IT+ +I F K K
Sbjct: 289 SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG-FCKKNVHK 347
Query: 527 AEKLLREMIARDLL 540
A LL +M+ ++L+
Sbjct: 348 AMGLLSKMLEQNLV 361
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 232/505 (45%), Gaps = 38/505 (7%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
FF + P + +N +L K Y+ A+S+ ++ME + VT N L+ +
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G + A V+ + K+G P+ IT+ T+I GK AL+ + G +
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD-LYSE 218
TY +++ L K ++ +++L ++ G P +NT++ +LC K + + ++ E
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFRE 481
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M + G P+ T++ LI + G A + EM + V TYN L++AL ++G
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 541
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYC----------LVNEVNKAR---------- 318
R +N+++ M +G KP +YS ++ Y + N + + +
Sbjct: 542 WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601
Query: 319 ---------------DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
F + G P++ +N M+ + M D+A +LE + +
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
+ P+ VTY+SL+D + G+ A E+L + D+++YN+ + C+ + + +
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
++ ++ ++GI+P + TYN + G G + ++V + + K N T+ +++G
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY 781
Query: 484 CKEGLFDEALTLMSKMED-NGCIHD 507
C+ G + EA+ +SK++ + C D
Sbjct: 782 CRAGKYSEAMDFVSKIKTFDPCFDD 806
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 229/540 (42%), Gaps = 36/540 (6%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKT-KHYSTAISLSRQMEITGITPNFVTLNI 93
+ + F RM +M +P ++ +N +L K + + + + +M G+ + T +
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCST 286
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+++ G A A + GY P T+T+N L++ G AL ++
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D VTY L+ + G ++ A ++ + +G+ P + Y T+ID+ K A
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ M G PN TY+A++ + + I +L +M P+ T+N ++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
G +G + + M G +PD T+++L+ Y A ++ M R G V
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 526
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL---------------IDGL 378
+YN ++ L + N++ +M + P + +YS + I+
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 379 CKTGKVSNAWELLDEMHV--------------------RGQPADIITYNSFLDALCKGHH 418
K G++ +W LL + + G D++ +NS L + +
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
D+ +++ I + G+ PD+ TYN L+D + G A+E+ + L K + +YNT
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
+I G C+ GL EA+ ++S+M + G T+ T +S G + E ++ M D
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 247/554 (44%), Gaps = 79/554 (14%)
Query: 60 LTSLVK----TKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
L SLVK + H+ A+ L + ++ + + +I + S +SV A +L
Sbjct: 139 LVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLL 198
Query: 116 KR----GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKM 171
+ Y D + T++ GK +A+ + + G VTY +++ KM
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 172 GQT-EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G++ L +L + +G+K +T++ + + L+ A + ++E+ + G P VT
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+AL+ F G +A+ +L EM + D VTYN LV A + G +EA ++ +M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI---------- 340
K+GV P+ +TY++++D Y + ++A +F +M G PN +YN ++
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 341 ------------------------YGLCKIKMVDEALN-LLEEMDYEKIIPNKVTYSSLI 375
LC K +D+ +N + EM P++ T+++LI
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
+ G +A ++ EM G A + TYN+ L+AL + G +I + KG +
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 436 PDMCTYNILLDGLCKCG----------RIKDAQ------------------------EVF 461
P +Y+++L K G RIK+ Q E
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 462 QDLFKK-GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
LFKK GY + +N+M++ + ++D+A ++ + ++G D +T+ +++
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 521 KGENDKAEKLLREM 534
+GE KAE++L+ +
Sbjct: 679 RGECWKAEEILKTL 692
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A LL+++ ++ + + Y++++ +TGK A +L + M G ++TYN LD
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 412 ALCK-GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
K G K + ++ ++ KG++ D T + +L + G +++A+E F +L GY
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
TYN ++ K G++ EAL+++ +ME+N C D +T+ +++A G + +A +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 531 LREMIARDLL 540
+ M + ++
Sbjct: 374 IEMMTKKGVM 383
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 234/481 (48%), Gaps = 11/481 (2%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
F+ ++ + + A + Q G + LN + C + + + V +
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
GY + TFN +I C KL AL +L G + V++ +I+G CK G
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 176 AALELLRR---IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
AL+LL + + G + P V YN++I+ CK + A + +M+ G+ N TY
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
AL+ + G +A+ L DEM K + + V YN +V L EG + A ++L M +
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
++ D T + ++ G C V +A + ++ + + ++ +N +++ + K + A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
+L M + + + +++ +LIDG K GK+ A E+ D M + ++++ YNS ++
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNG 510
Query: 413 LCKGHHVDKGIALIKKIIDKGIQ-PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG--Y 469
L K +G+A + + ++ D+ TYN LL+ K G +++A ++ + K+
Sbjct: 511 LSK-----RGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEK 565
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
+++ T+N MIN LCK G +++A ++ M + G + D IT+ T+I++ + +K +
Sbjct: 566 SVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVE 625
Query: 530 L 530
L
Sbjct: 626 L 626
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 230/456 (50%), Gaps = 13/456 (2%)
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKR----GYHPDTITFNTLIKGLCLHGKLHRALQF 145
L+I+ N G+ S VL+ +++ G PD F++L++ +G A +
Sbjct: 113 ALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEV 170
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
+ A+GF + + L + + + ++ + ++ G V +N +I S CK
Sbjct: 171 IEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCK 230
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN---IDPD 262
+ A ++ M+ G+ PNVV+++ +I G C G ++ A+ LL +M + + + P+
Sbjct: 231 ESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPN 290
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
VTYN +++ K G++ A+ + M+K GV + TY +L+D Y ++A + +
Sbjct: 291 AVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD 350
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
M +G+ N YN ++Y L ++ A+++L +M+ + + ++ T + ++ GLC+ G
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
V A E ++ + DI+ +N+ + + + ++ ++ +G+ D ++
Sbjct: 411 YVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFG 470
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 502
L+DG K G+++ A E++ + K N YN+++NGL K G+ A +++ ME
Sbjct: 471 TLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME-- 528
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
I D +T+ T+++ + G ++A+ +L +M +D
Sbjct: 529 --IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQD 562
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 192/383 (50%), Gaps = 3/383 (0%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ +L+ + G + A E++ + G +V N + L V + + +Y EM
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
+ G NV T++ +IY FC +L +A+ + M+ + P+VV++N+++D K G +R
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 281 EAKNMLA---VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
A +L +M V P+ VTY+S+++G+C ++ A + M + GV N ++Y
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
++ + DEAL L +EM + ++ N V Y+S++ L G + A +L +M+ +
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
D T + LC+ +V + + ++I +K + D+ +N L+ + ++ A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
++ + +G +L+ ++ T+I+G KEG + AL + M + + + +I++
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNG 510
Query: 518 LFEKGENDKAEKLLREMIARDLL 540
L ++G AE ++ M +D++
Sbjct: 511 LSKRGMAGAAEAVVNAMEIKDIV 533
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 200/412 (48%), Gaps = 11/412 (2%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG---ITPNFVTLN 92
+ +S F RML+ + P ++ FN ++ KT A+ L +M + ++PN VT N
Sbjct: 236 EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+IN C G+ A + +++K G + T+ L+ G AL+ D++ ++
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G ++ V Y +++ L G E A+ +LR + + ++ ++ LC+ V A
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ ++ K + ++V ++ L++ F +L A +L M+++ + D +++ L+D
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
KEGK+ A + MIK ++V Y+S+++G A V NAM +
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKD 531
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEM---DYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
+ +YN ++ K V+EA ++L +M D EK + + VT++ +I+ LCK G A E
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSV-SLVTFNIMINHLCKFGSYEKAKE 590
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
+L M RG D ITY + + + K +K + L +I +G+ P Y
Sbjct: 591 VLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 6/304 (1%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D+ + + M + + +N ++ L A+S+ R M + + T I+
Sbjct: 343 DEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIV 402
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+ C G A I ++ D + NTL+ KL A Q +L QG
Sbjct: 403 VRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGL 462
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
LD +++ TLI+G K G+ E ALE+ + +V+YN+I++ L K + A
Sbjct: 463 SLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEA 522
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDV--VTYNILVDA 272
+ + M K ++VTY+ L+ G +++A +L +M ++ + V VT+NI+++
Sbjct: 523 VVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINH 578
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K G +AK +L M+++GV PD +TY +L+ + K ++ + + +GVTP+
Sbjct: 579 LCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPH 638
Query: 333 VQSY 336
Y
Sbjct: 639 EHIY 642
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 2/345 (0%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFS 109
TP + F+ + + K + A QM+ G P + N ++ G+ A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+ + P+ T N ++ G C GKL + ++ D+ GF+ V+Y TLI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
+ G +AL+L + G++P VV +NT+I C+ + A ++ EM A ++PN V
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ LI G+ G + A ++MV I D++TYN L+ L K+ K R+A + +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
K+ + P+ T+S+L+ G C+ ++ +++ +M R G PN Q++N+++ C+ +
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
D A +L EM I + T + +GL GK +LL EM
Sbjct: 465 DGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 183/394 (46%), Gaps = 26/394 (6%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITG--------------------ITPNFVTLNILINCH 98
VL +L K + + +A S+ R + + G TP + L
Sbjct: 121 VLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPR--VFDSLFKTF 178
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
+L + +A + G+ P + N + L G++ AL+F+ ++ +
Sbjct: 179 AHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNP 238
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
T +++G C+ G+ + +ELL+ +E G + T V YNT+I C+ L+S A L +
Sbjct: 239 YTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNM 298
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M G+ PNVVT++ LI+GFC +L++A + EM N+ P+ VTYN L++ ++G
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
A M+ G++ D++TY++L+ G C + KA + + + PN +++
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I G C K D L + M PN+ T++ L+ C+ A ++L EM R
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
P D T + +C G L+KK++ +
Sbjct: 479 IPLDSRT----VHQVCNGLKHQGKDQLVKKLLQE 508
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 175/354 (49%)
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
R T +++++ + +K +A D + +M G P V + +A + G++
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
A+ EM I P+ T N+++ + GK+ + +L M + G + V+Y++L+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
G+C ++ A + N M + G+ PNV ++N +I+G C+ + EA + EM + P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
N VTY++LI+G + G A+ ++M G DI+TYN+ + LCK K +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
K++ + + P+ T++ L+ G C E+++ + + G + N T+N +++ C+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
FD A ++ +M D T + + L +G++ +KLL+EM + L
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 165/340 (48%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ +L + + A + +++ G PTV N + SL V A Y EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
ISPN T + ++ G+C G+L + I LL +M V+YN L+ ++G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A + +M K G++P+VVT+++L+ G+C ++ +A VF M V PN +YN +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G + + A E+M I + +TY++LI GLCK K A + + E+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ T+++ + C + D+G L K +I G P+ T+N+L+ C+ A +V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
+++ ++ L++ T + + NGL +G L+ +ME
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
F++L K K A + GF + ++ L G+ + AL R +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
I P N ++ C+ + +L +M G V+Y+ LI G C G L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
A+ L + M + P+VVT+N L+ + K++EA + M V P+ VTY++L+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+GY + A + M G+ ++ +YN +I+GLCK +A ++E+D E ++
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
PN T+S+LI G C +EL M G + T+N + A C+ D +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+++++ + I D T + + +GL G+ + +++ Q++ K +
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 135/305 (44%), Gaps = 2/305 (0%)
Query: 3 SWLRLKRFPFLSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTS 62
+++++K + FL P VD + F+ M + +I+P N V++
Sbjct: 190 TFMQMKDYGFL--PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSG 247
Query: 63 LVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPD 122
++ I L + ME G V+ N LI HC G +SA + + K G P+
Sbjct: 248 YCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPN 307
Query: 123 TITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLR 182
+TFNTLI G C KL A + ++ A + VTY TLING + G E A
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 183 RIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVG 242
+ GI+ ++ YN +I LCK A E+ + + PN T+SALI G C+
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+ L M+ P+ T+N+LV A + A +L M+++ + D T
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Query: 303 SLMDG 307
+ +G
Sbjct: 488 QVCNG 492
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + M ++ + +N ++ + S+A+ L M +G+ PN VT N
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ C + A V + P+T+T+NTLI G G A +F++D++ G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
Q D +TY LI GLCK +T A + ++ ++ + P ++ +I C K F
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+LY MI G PN T++ L+ FC A +L EMV ++I D T + + + L
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 274 GKEGKVREAKNMLAVM 289
+GK + K +L M
Sbjct: 494 KHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 2/345 (0%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFS 109
TP + F+ + + K + A QM+ G P + N ++ G+ A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+ + P+ T N ++ G C GKL + ++ D+ GF+ V+Y TLI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
+ G +AL+L + G++P VV +NT+I C+ + A ++ EM A ++PN V
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ LI G+ G + A ++MV I D++TYN L+ L K+ K R+A + +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
K+ + P+ T+S+L+ G C+ ++ +++ +M R G PN Q++N+++ C+ +
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
D A +L EM I + T + +GL GK +LL EM
Sbjct: 465 DGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 183/394 (46%), Gaps = 26/394 (6%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITG--------------------ITPNFVTLNILINCH 98
VL +L K + + +A S+ R + + G TP + L
Sbjct: 121 VLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPR--VFDSLFKTF 178
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
+L + +A + G+ P + N + L G++ AL+F+ ++ +
Sbjct: 179 AHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNP 238
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
T +++G C+ G+ + +ELL+ +E G + T V YNT+I C+ L+S A L +
Sbjct: 239 YTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNM 298
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M G+ PNVVT++ LI+GFC +L++A + EM N+ P+ VTYN L++ ++G
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
A M+ G++ D++TY++L+ G C + KA + + + PN +++
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I G C K D L + M PN+ T++ L+ C+ A ++L EM R
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
P D T + +C G L+KK++ +
Sbjct: 479 IPLDSRT----VHQVCNGLKHQGKDQLVKKLLQE 508
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 175/354 (49%)
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
R T +++++ + +K +A D + +M G P V + +A + G++
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
A+ EM I P+ T N+++ + GK+ + +L M + G + V+Y++L+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
G+C ++ A + N M + G+ PNV ++N +I+G C+ + EA + EM + P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
N VTY++LI+G + G A+ ++M G DI+TYN+ + LCK K +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
K++ + + P+ T++ L+ G C E+++ + + G + N T+N +++ C+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
FD A ++ +M D T + + L +G++ +KLL+EM + L
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 165/340 (48%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ +L + + A + +++ G PTV N + SL V A Y EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
ISPN T + ++ G+C G+L + I LL +M V+YN L+ ++G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A + +M K G++P+VVT+++L+ G+C ++ +A VF M V PN +YN +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G + + A E+M I + +TY++LI GLCK K A + + E+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ T+++ + C + D+G L K +I G P+ T+N+L+ C+ A +V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
+++ ++ L++ T + + NGL +G L+ +ME
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
F++L K K A + GF + ++ L G+ + AL R +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
I P N ++ C+ + +L +M G V+Y+ LI G C G L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
A+ L + M + P+VVT+N L+ + K++EA + M V P+ VTY++L+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+GY + A + M G+ ++ +YN +I+GLCK +A ++E+D E ++
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
PN T+S+LI G C +EL M G + T+N + A C+ D +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+++++ + I D T + + +GL G+ + +++ Q++ K +
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 135/305 (44%), Gaps = 2/305 (0%)
Query: 3 SWLRLKRFPFLSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTS 62
+++++K + FL P VD + F+ M + +I+P N V++
Sbjct: 190 TFMQMKDYGFL--PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSG 247
Query: 63 LVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPD 122
++ I L + ME G V+ N LI HC G +SA + + K G P+
Sbjct: 248 YCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPN 307
Query: 123 TITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLR 182
+TFNTLI G C KL A + ++ A + VTY TLING + G E A
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 183 RIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVG 242
+ GI+ ++ YN +I LCK A E+ + + PN T+SALI G C+
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+ L M+ P+ T+N+LV A + A +L M+++ + D T
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Query: 303 SLMDG 307
+ +G
Sbjct: 488 QVCNG 492
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + M ++ + +N ++ + S+A+ L M +G+ PN VT N
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ C + A V + P+T+T+NTLI G G A +F++D++ G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
Q D +TY LI GLCK +T A + ++ ++ + P ++ +I C K F
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+LY MI G PN T++ L+ FC A +L EMV ++I D T + + + L
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 274 GKEGKVREAKNMLAVM 289
+GK + K +L M
Sbjct: 494 KHQGKDQLVKKLLQEM 509
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/596 (24%), Positives = 249/596 (41%), Gaps = 92/596 (15%)
Query: 34 VDDTVSFFNRMLQMRI-TPPIIEFNKVLTSLVKTKHYSTAISLSR--QMEITGITPNFVT 90
VD+ S F+R+ +M + P +N +L ++ K+ S + +R +M G + T
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGY---HPDTI----------------------- 124
L ++ +C G++ A SV IL RG+ H TI
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEE 276
Query: 125 --------TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
T+ LI G ++ +A Q + + G D Y LI GLCK E
Sbjct: 277 RDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEM 336
Query: 177 ALELLRRIEGRGIKP---------------------------------TVVMYNTIIDSL 203
AL L I+ GI P +++Y ++ +
Sbjct: 337 ALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGF 396
Query: 204 CKVKLVSHAF------------DLYSEMIA------KGISPNVVTYSALIYGFCIVGQLK 245
+ LV A+ D SE++ K I P+ + S +I ++
Sbjct: 397 IRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVD 456
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
A+ LL ++V + P + YN +++ + KEG+ E+ +L M GV+P T + +
Sbjct: 457 MAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY 516
Query: 306 DGYCLVNEVN--KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
CL + A D+ M G P ++ ++ LC+ +A L+++ E
Sbjct: 517 G--CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEG 574
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
+ + V ++ IDGL K V EL ++ G D+I Y+ + ALCK +
Sbjct: 575 FLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEAD 634
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
L +++ KG++P + TYN ++DG CK G I +++ N + TY ++I+GL
Sbjct: 635 ILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGL 694
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
C G EA+ ++M+ C + ITF +I L + G + +A REM +++
Sbjct: 695 CASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEM 750
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 174/363 (47%)
Query: 83 GITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA 142
I P+ +L+I+INC + A ++L +I++ G P + +N +I+G+C G+ +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 143 LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS 202
L+ ++ G + Q T + L + AL+LL+++ G +P + ++
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 203 LCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD 262
LC+ A ++ +G ++V +A I G + + + L ++ PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
V+ Y++L+ AL K + EA + M+ +G+KP V TY+S++DG+C E+++
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
M P+V +Y +I+GLC EA+ EM + PN++T+ +LI GLCK G
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
A EM + D Y S + + +++ G + ++++ KG P N
Sbjct: 734 WSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRN 793
Query: 443 ILL 445
+L
Sbjct: 794 YML 796
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 215/530 (40%), Gaps = 51/530 (9%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRG 118
++ S K A L +E I N+ T +LI+ + AF + + + G
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF------------------QLDQVT 160
+ D ++ LI GLC H L AL + ++ G +L ++T
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT 373
Query: 161 ---------------YATLINGLCKMGQTEAALELLRRIEG------------------R 187
Y +L G + A ++ + G +
Sbjct: 374 EVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK 433
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
I P + +I+ L K V A L +++ G+ P + Y+ +I G C G+ +++
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+ LL EM ++P T N + L + A ++L M G +P + + L+
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
C A + +A G ++ + I GL K + VD L L ++ P+
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
+ Y LI LCK + A L +EM +G + TYNS +D CK +D+G++ I
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
++ + PD+ TY L+ GLC GR +A + ++ K N T+ +I GLCK G
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
EAL +ME+ D + +++S+ + + REM+ +
Sbjct: 734 WSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHK 783
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 203/489 (41%), Gaps = 57/489 (11%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D F +M +M + I ++ ++ L K K A+SL +++ +GI P+ L
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
Query: 94 LINCHCYLGQTTS------------------------------------AFSVLANIL-- 115
L+ C + + A+S + N++
Sbjct: 359 LL---CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGN 415
Query: 116 ----------------KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
+ PD+ + + +I L K+ A+ D++ G +
Sbjct: 416 YESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPM 475
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y +I G+CK G++E +L+LL ++ G++P+ N I L + A DL +M
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
G P + + L+ C G+ A LD++ + +V +D L K V
Sbjct: 536 RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGV 595
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ + G PDV+ Y L+ C +A +FN M +G+ P V +YN M
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I G CK +D L+ + M ++ P+ +TY+SLI GLC +G+ S A +EM +
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
+ IT+ + + LCK + + +++ +K ++PD Y L+ I
Sbjct: 716 YPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFG 775
Query: 460 VFQDLFKKG 468
+F+++ KG
Sbjct: 776 IFREMVHKG 784
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++++ M + P N + L + + A+ L ++M G P L
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+ C G+ A L ++ G+ + I GL + + R L+ D+ A G
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
D + Y LI LCK +T A L + +G+KPTV YN++ID CK +
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
M +P+V+TY++LI+G C G+ +AI +EM K+ P+ +T+ L+ L
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLC 730
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
K G EA M ++ ++PD Y SL+ + +N +F M +G P
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
Query: 335 SYNIMI 340
N M+
Sbjct: 791 DRNYML 796
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD + F + P +I ++ ++ +L K A L +M G+ P T N
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I+ C G+ S + + + +PD IT+ +LI GLC G+ A+ +++ +
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+++T+ LI GLCK G + AL R +E + ++P +Y +++ S + ++ F
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 214 DLYSEMIAKGISP 226
++ EM+ KG P
Sbjct: 775 GIFREMVHKGRFP 787
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 210/459 (45%), Gaps = 12/459 (2%)
Query: 80 EITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKL 139
E TP+ N+++ Q A + + +R PD T++TLI G
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 140 HRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTI 199
AL + + D V Y+ LI ++ A+ + R++ GI P +V YN++
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 200 IDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
I+ K KL A L EM G+ PN V+YS L+ + + +A+ + EM N
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
D+ T NI++D G+ V+EA + + K ++P+VV+Y++++ Y +A
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+F M R+ + NV +YN MI K ++A NL++EM I PN +TYS++I
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK----GHHVDKGIALIKKIIDKGIQ 435
K GK+ A L ++ G D + Y + + A + GH K+++ +
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGH--------AKRLLHELKL 498
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
PD + L K GR ++A VF+ F+ G + + MIN + + + +
Sbjct: 499 PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
KM G D +++A ++ E +KA+ + REM
Sbjct: 559 FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 231/501 (46%), Gaps = 6/501 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+ M Q + P ++ ++TS K + +A+S ++ME ++ + V + LI
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
L + A S+ + + + G PD + +N++I A ++ G + V+
Sbjct: 238 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 297
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y+TL++ + + AL + ++ + N +ID ++ +V A L+ +
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
I PNVV+Y+ ++ + +AI L M K+I+ +VVTYN ++ GK +
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+A N++ M +G++P+ +TYS+++ + ++++A +F + GV + Y MI
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
++ ++ A LL E+ +P+ + + I L K G+ A + + G+
Sbjct: 478 VAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
DI + ++ + I + +K+ G PD ++L+ K + A V
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
++++ ++G + + M++ + F+ +L ++E + ++ +++AL+E
Sbjct: 594 YREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSK-ELHLVVAALYE 652
Query: 521 KGEN-DKAEKLLREMIARDLL 540
+ + + A +++ M R +L
Sbjct: 653 RADKLNDASRVMNRMRERGIL 673
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V + F + +M I P ++ +N +L + + + AI L R M+ I N VT N
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I + + A +++ + RG P+ IT++T+I GKL RA + + G
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
++DQV Y T+I ++G A LL ++ P + T I L K A
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEAT 521
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
++ + G ++ + +I + + I + ++M PD ++++A
Sbjct: 522 WVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAY 581
Query: 274 GKEGKVREAKNMLAVMIKQG-VKPDVVTYSSL 304
GK+ + +A + M ++G V PD V + L
Sbjct: 582 GKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 208/423 (49%), Gaps = 10/423 (2%)
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
D T +IK L KL+ A D+ +G D+ + LI K G + ++++
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
++++ G++ T+ YN++ + + A +++M+++G+ P TY+ +++GF +
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 268
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
+L+ A+ ++M + I PD T+N +++ + K+ EA+ + M + P VV+Y
Sbjct: 269 LRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
++++ GY V+ V+ +F M G+ PN +Y+ ++ GLC + EA N+L+ M
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 362 EKIIP-NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ I P + + L+ K G ++ A E+L M PA+ Y ++ CK +
Sbjct: 389 KHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYN 448
Query: 421 KGIALIKKIIDKGI--------QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
+ I L+ +I+K I + + YN +++ LC G+ A+ +F+ L K+G
Sbjct: 449 RAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQ 508
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
+ N +I G KEG D + ++ M G + +E +I + KGE A+ L
Sbjct: 509 D-ALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALD 567
Query: 533 EMI 535
M+
Sbjct: 568 SMV 570
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 221/480 (46%), Gaps = 17/480 (3%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
++ + ++M+ G+ + N L G+ A ++ G P T+N ++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
G L +L AL+F +D+ +G D T+ T+ING C+ + + A +L ++G I P
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
+VV Y T+I V V ++ EM + GI PN TYS L+ G C G++ +A +L
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 252 DEMVLKNIDP-DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
M+ K+I P D + L+ + K G + A +L M V + Y L++ C
Sbjct: 384 KNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Query: 311 VNEVNKARDVFNAMARRGVTPNVQ--------SYNIMIYGLCKIKMVDEALNLLEEMDYE 362
+ N+A + + + + + Q +YN +I LC +A L ++ +
Sbjct: 444 ASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL-MK 502
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA-LCKGHHVDK 421
+ + ++ ++LI G K G +++E+L M RG P + Y + + + KG D
Sbjct: 503 RGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDA 562
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK--GYNLNNWTYNTM 479
AL +++ G PD + +++ L + GR++ A V + K G N +
Sbjct: 563 KTAL-DSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKI 621
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ L G +EAL + + NG D ++++S L EKG+ A KLL + RDL
Sbjct: 622 LEALLMRGHVEEALGRIDLLNQNGHTAD---LDSLLSVLSEKGKTIAALKLLDFGLERDL 678
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 199/442 (45%), Gaps = 10/442 (2%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
A +L ++ ++G D F LI+ G + +++ + G + +Y +L
Sbjct: 169 ARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFK 228
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
+ + G+ A ++ G++PT YN ++ + A + +M +GISP
Sbjct: 229 VILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISP 288
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ T++ +I GFC ++ +A L EM I P VV+Y ++ +V + +
Sbjct: 289 DDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIF 348
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS-YNIMIYGLCK 345
M G++P+ TYS+L+ G C ++ +A+++ M + + P S + ++ K
Sbjct: 349 EEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSK 408
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD-----EMHVRGQP 400
+ A +L+ M + Y LI+ CK + A +LLD E+ +R Q
Sbjct: 409 AGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQD 468
Query: 401 A---DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
+ YN ++ LC K L ++++ +G+Q D N L+ G K G +
Sbjct: 469 TLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSS 527
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
E+ + + ++G + Y +I +G +A T + M ++G + D F ++I +
Sbjct: 528 YEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIES 587
Query: 518 LFEKGENDKAEKLLREMIARDL 539
LFE G A +++ MI +++
Sbjct: 588 LFEDGRVQTASRVMMIMIDKNV 609
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 228/504 (45%), Gaps = 15/504 (2%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+FN+M+ + P +N +L + TA+ M+ GI+P+ T N +IN C
Sbjct: 242 YFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFC 301
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
+ A + + P +++ T+IKG ++ L+ +++ + G + +
Sbjct: 302 RFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNAT 361
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPT-VVMYNTIIDSLCKVKLVSHAFDLYSE 218
TY+TL+ GLC G+ A +L+ + + I P ++ ++ S K ++ A ++
Sbjct: 362 TYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKA 421
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI--------DPDVVTYNILV 270
M + Y LI C +AI LLD ++ K I + + YN ++
Sbjct: 422 MATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPII 481
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
+ L G+ +A+ + ++K+GV+ D ++L+ G+ + + ++ M+RRGV
Sbjct: 482 EYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVP 540
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+Y ++I +A L+ M + +P+ + S+I+ L + G+V A +
Sbjct: 541 RESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRV 600
Query: 391 LDEMHVR--GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
+ M + G ++ L+AL HV++ + I + G D+ + LL L
Sbjct: 601 MMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDS---LLSVL 657
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
+ G+ A ++ ++ +L +Y+ +++ L G A +++ K+ + G D
Sbjct: 658 SEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDW 717
Query: 509 ITFETIISALFEKGENDKAEKLLR 532
+ + +I +L ++G +A+ L R
Sbjct: 718 KSSDELIKSLNQEGNTKQADVLSR 741
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 212/497 (42%), Gaps = 48/497 (9%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++ + FF M I+P FN ++ + K A L +M+ I P+ V+
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I + + + + + G P+ T++TL+ GLC GK+ A +++A+
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Query: 154 FQ-LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D + L+ K G AA E+L+ + + Y +I++ CK + A
Sbjct: 391 IAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRA 450
Query: 213 FDLYSEMIAKGI----------SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD 262
L +I K I P+ Y+ +I C GQ +A L +++ + + D
Sbjct: 451 IKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-D 507
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
N L+ KEG + +L +M ++GV + Y L+ Y E A+ +
Sbjct: 508 QDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALD 567
Query: 323 AMARRGVTPNVQSYNIMIYGLCK-----------IKMVDEALNLLEEMDYEKIIPNKVTY 371
+M G P+ + +I L + + M+D+ + + + MD
Sbjct: 568 SMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDL---------I 618
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC-KGHHVDKGIALIKKII 430
+ +++ L G V A +D ++ G AD+ +S L L KG K IA + K++
Sbjct: 619 AKILEALLMRGHVEEALGRIDLLNQNGHTADL---DSLLSVLSEKG----KTIAAL-KLL 670
Query: 431 DKGIQPDM----CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
D G++ D+ +Y+ +LD L G+ +A V + +KG + + + + +I L +E
Sbjct: 671 DFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQE 730
Query: 487 GLFDEALTLMSKMEDNG 503
G +A ++S+M G
Sbjct: 731 GNTKQA-DVLSRMIKKG 746
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 186/366 (50%), Gaps = 5/366 (1%)
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
+++ + + G +E +R+ I+P ++ ++ +V A ++ EM G
Sbjct: 140 ILSKMRQFGAVWGLIEEMRKTNPELIEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYG 197
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
+ P+ + L+ C G +K+A + ++M K P++ + L+ +EGK+ EAK
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
+L M + G++PD+V +++L+ GY ++ A D+ N M +RG PNV Y ++I L
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 344 CKI-KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
C+ K +DEA+ + EM+ + VTY++LI G CK G + + +LD+M +G
Sbjct: 317 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 376
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
+TY + A K ++ + LI+K+ +G PD+ YN+++ CK G +K+A ++
Sbjct: 377 QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWN 436
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
++ G + T+ MING +G EA +M G P + T+ S L
Sbjct: 437 EMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAP-QYGTLKSLLNNLV 495
Query: 523 ENDKAE 528
+DK E
Sbjct: 496 RDDKLE 501
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 193/431 (44%), Gaps = 11/431 (2%)
Query: 63 LVKTKHYSTAISLSRQMEITG---ITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGY 119
L K + + L +M T I P +L+ A VL + K G
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 120 HPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALE 179
PD F L+ LC +G + A + +D + + F + + +L+ G C+ G+ A E
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFED-MREKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 180 LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFC 239
+L +++ G++P +V++ ++ ++ A+DL ++M +G PNV Y+ LI C
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 240 IV-GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
++ +A+ + EM + D+VTY L+ K G + + ++L M K+GV P
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
VTY +M + + + ++ M RRG P++ YN++I CK+ V EA+ L E
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG--QPADIITYNSFLDALCKG 416
M+ + P T+ +I+G G + A EM RG T S L+ L +
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRD 497
Query: 417 HHVDKGIALIKKIIDK--GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
++ + I +K + ++ + I + L G +K+A D+ +
Sbjct: 498 DKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPN 557
Query: 475 TYNTMINGLCK 485
TY ++ GL K
Sbjct: 558 TYAKLMKGLNK 568
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 203 LCKVKLVSHAFDLYSEMIAKGISPNVVT---YSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
L K++ + L EM + +P ++ + L+ F +K+A+ +LDEM +
Sbjct: 141 LSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
+PD + L+DAL K G V+EA + M ++ P++ ++SL+ G+C ++ +A++
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
V M G+ P++ + ++ G + +A +L+ +M PN Y+ LI LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 380 KTGK-VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
+T K + A + EM G ADI+TY + + CK +DKG +++ + KG+ P
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
TY ++ K + ++ E+ + + ++G + + YN +I CK G EA+ L ++
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
ME NG TF +I+ +G +A +EM++R +
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 175/353 (49%), Gaps = 6/353 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V + F M + + P + F +L + A + QM+ G+ P+ V
Sbjct: 217 SVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFT 275
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLC-LHGKLHRALQFHDDVLA 151
L++ + + G+ A+ ++ ++ KRG+ P+ + LI+ LC ++ A++ ++
Sbjct: 276 NLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER 335
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G + D VTY LI+G CK G + +L + +G+ P+ V Y I+ + K +
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE 395
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+L +M +G P+++ Y+ +I C +G++K+A+ L +EM + P V T+ I+++
Sbjct: 396 CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMIN 455
Query: 272 ALGKEGKVREAKNMLAVMIKQGV--KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+G + EA N M+ +G+ P T SL++ +++ A+DV++ ++ +
Sbjct: 456 GFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTS 515
Query: 330 TP--NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
+ NV ++ I I+ L V EA + +M ++P TY+ L+ GL K
Sbjct: 516 SCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 192/369 (52%), Gaps = 14/369 (3%)
Query: 35 DDTVSFFNRMLQM--RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEI-----TGITPN 87
D + FN ++Q+ R+ P + + L L+ S ++LSR++ + G+ PN
Sbjct: 141 DKVMEMFN-LIQVIARVKPSLNAISTCLNLLID----SGEVNLSRKLLLYAKHNLGLQPN 195
Query: 88 FVTLNILINCHCYLGQTTSAFSVLANILKRG-YHPDTITFNTLIKGLCLHGKLHRALQFH 146
NIL+ HC G AF V+ + + G +P++IT++TL+ L H + A++
Sbjct: 196 TCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELF 255
Query: 147 DDVLA-QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
+D+++ +G D VT+ +ING C+ G+ E A ++L ++ G P V Y+ +++ CK
Sbjct: 256 EDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCK 315
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
V + A + E+ G+ + V Y+ L+ FC G+ +A+ LL EM D +T
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
YN+++ L EG+ EA ML +GV + +Y +++ C E+ KA + M+
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
RG+ P+ ++N ++ LC+ + + +L +IP ++ ++++ +CK K+
Sbjct: 436 ERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLV 495
Query: 386 NAWELLDEM 394
+ +ELLD +
Sbjct: 496 HVFELLDSL 504
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 180/354 (50%), Gaps = 13/354 (3%)
Query: 145 FHDDVLAQGFQLDQV---------TYATLINGLCKMGQTEAALELLRRIEGR-GIKPTVV 194
HD V+ + F L QV +T +N L G+ + +LL + G++P
Sbjct: 139 LHDKVM-EMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTC 197
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS-PNVVTYSALIYGFCIVGQLKQAIGLLDE 253
++N ++ CK ++ AF + EM GIS PN +TYS L+ + K+A+ L ++
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 254 MVLKN-IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
M+ K I PD VT+N++++ + G+V AK +L M K G P+V YS+LM+G+C V
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
++ +A+ F+ + + G+ + Y ++ C+ DEA+ LL EM + + +TY+
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
++ GL G+ A ++LD+ G + +Y L+ALC ++K + + + ++
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
GI P T+N L+ LC+ G + V + G ++ ++ +CKE
Sbjct: 438 GIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 163/314 (51%), Gaps = 2/314 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIK-PTVVMYNTIIDSLCKVKLVSH 211
G Q + + L+ CK G A ++ ++ GI P + Y+T++D L
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 212 AFDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A +L+ +MI+K GISP+ VT++ +I GFC G++++A +LD M +P+V Y+ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
+ K GK++EAK + K G+K D V Y++LM+ +C E ++A + M
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+ +YN+++ GL +EAL +L++ E + NK +Y +++ LC G++ A +
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
L M RG T+N + LC+ + + G+ ++ + G+ P ++ +++ +CK
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 451 CGRIKDAQEVFQDL 464
++ E+ L
Sbjct: 491 ERKLVHVFELLDSL 504
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 201/408 (49%), Gaps = 6/408 (1%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
++G++ + T++ L+ L H K + + + + + L+ + +
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 176 AALELLRRIEGRG-IKPTVVMYNTIIDSLCKVKLV--SHAFDLYSEMIAKGISPNVVTYS 232
+E+ I+ +KP++ +T ++ L V S LY++ G+ PN ++
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH-NLGLQPNTCIFN 200
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNID-PDVVTYNILVDALGKEGKVREAKNMLAVMI- 290
L+ C G + A +++EM I P+ +TY+ L+D L + +EA + MI
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K+G+ PD VT++ +++G+C EV +A+ + + M + G PNV +Y+ ++ G CK+ +
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA +E+ + + V Y++L++ C+ G+ A +LL EM AD +TYN L
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
L ++ + ++ + +G+ + +Y I+L+ LC G ++ A + + ++G
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ T+N ++ LC+ G + + ++ G I P ++ ++ ++
Sbjct: 441 PHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 142/288 (49%), Gaps = 3/288 (1%)
Query: 255 VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYSSLMDGYCLVNE 313
V+ + P + + ++ L G+V ++ +L G++P+ ++ L+ +C +
Sbjct: 152 VIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGD 211
Query: 314 VNKARDVFNAMARRGVT-PNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTY 371
+N A V M R G++ PN +Y+ ++ L EA+ L E+M E I P+ VT+
Sbjct: 212 INFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTF 271
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
+ +I+G C+ G+V A ++LD M G ++ Y++ ++ CK + + ++
Sbjct: 272 NVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKK 331
Query: 432 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 491
G++ D Y L++ C+ G +A ++ ++ + TYN ++ GL EG +E
Sbjct: 332 TGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEE 391
Query: 492 ALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
AL ++ + G + ++ I++AL GE +KA K L M R +
Sbjct: 392 ALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 1/268 (0%)
Query: 13 LSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMR-ITPPIIEFNKVLTSLVKTKHYST 71
+S PN + V F M+ I+P + FN ++ +
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
A + M+ G PN + L+N C +G+ A + K G DT+ + TL+
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
C +G+ A++ ++ A + D +TY ++ GL G++E AL++L + G+
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
Y I+++LC + A S M +GI P+ T++ L+ C G + + +L
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 252 DEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ + P ++ +V+++ KE K+
Sbjct: 467 IGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 117/293 (39%), Gaps = 75/293 (25%)
Query: 319 DVFN-AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE--------------- 362
D+FN A ++G N +Y++++ L + K +L +M YE
Sbjct: 74 DIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRH 133
Query: 363 ---------------------KIIPNKVTYSSLIDGLCKTGKVSNAWE-LLDEMHVRGQP 400
++ P+ S+ ++ L +G+V+ + + LL H G
Sbjct: 134 FSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQ 193
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI-------------------------- 434
+ +N + CK ++ +++++ GI
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 435 -----------QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
PD T+N++++G C+ G ++ A+++ + K G N N + Y+ ++NG
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
CK G EA +++ G D + + T+++ GE D+A KLL EM A
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 35/206 (16%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + ++ ++ K A +++ TG+ + V L+NC C G+T A +
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 111 LANILKRGYHPDTITFNTLIKGL-----------------------------------CL 135
L + DT+T+N +++GL C
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 136 HGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVM 195
+G+L +A++F + +G T+ L+ LC+ G TE + +L G+ P
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKS 480
Query: 196 YNTIIDSLCKVKLVSHAFDLYSEMIA 221
+ +++S+CK + + H F+L +++
Sbjct: 481 WGAVVESICKERKLVHVFELLDSLVS 506
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 209/423 (49%), Gaps = 10/423 (2%)
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
R T N LI+ G+ H A + G + ++Y TL+ + Q +
Sbjct: 43 RTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGS 98
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
++ +E G K + +N +I++ + + A +M G++P TY+ LI
Sbjct: 99 ISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIK 158
Query: 237 GFCIVGQLKQAIGLLDEMVLK-NID--PDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
G+ I G+ +++ LLD M+ + N+D P++ T+N+LV A K+ KV EA ++ M + G
Sbjct: 159 GYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARD--VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
V+PD VTY+++ Y E +A V + + PN ++ I++ G C+ V +
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRD 278
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
L + M ++ N V ++SLI+G + E+L M AD+ITY++ ++
Sbjct: 279 GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMN 338
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
A +++K + K+++ G++PD Y+IL G + K A+E+ + L +
Sbjct: 339 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RP 397
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
N + T+I+G C G D+A+ + +KM G + TFET++ E + KAE++L
Sbjct: 398 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 457
Query: 532 REM 534
+ M
Sbjct: 458 QMM 460
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 204/417 (48%), Gaps = 6/417 (1%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ + F + + P +I + +L ++ K Y + S+ ++E +G + + N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG-- 153
N G A L + + G +P T T+NTLIKG + GK R+ + D +L +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 154 -FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS-LCKVKLVSH 211
+ T+ L+ CK + E A E+++++E G++P V YNTI + K + V
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 212 AFDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
++ +M+ K PN T ++ G+C G+++ + + M ++ ++V +N L+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
+ + +L +M + VK DV+TYS++M+ + + KA VF M + GV
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
P+ +Y+I+ G + K +A LLE + E PN V ++++I G C G + +A +
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRV 421
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
++M G +I T+ + + + K +++ + G++P+ T+ +L +
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 207/440 (47%), Gaps = 6/440 (1%)
Query: 58 KVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKR 117
K++ L++ A ++ + + TG P+ ++ L+ Q S S+++ + +
Sbjct: 50 KLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G D+I FN +I G + A+Q + G TY TLI G G+ E +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 178 LELLRRIEGRG---IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
ELL + G + P + +N ++ + CK K V A+++ +M G+ P+ VTY+ +
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 235 IYGFCIVGQLKQAIG-LLDEMVLKN-IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+ G+ +A ++++MV+K P+ T I+V +EG+VR+ + M +
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
V+ ++V ++SL++G+ V + + +V M V +V +Y+ ++ +++A
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 349
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
+ +EM + P+ YS L G + + A ELL+ + V +P +++ + + +
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISG 408
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
C +D + + K+ G+ P++ T+ L+ G + + A+EV Q + G
Sbjct: 409 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Query: 473 NWTYNTMINGLCKEGLFDEA 492
N T+ + GL DE+
Sbjct: 469 NSTFLLLAEAWRVAGLTDES 488
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 6/319 (1%)
Query: 49 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAF 108
+ P I FN ++ + K K A + ++ME G+ P+ VT N + C+ G+T A
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 109 SVLAN--ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
S + ++K P+ T ++ G C G++ L+F + + + V + +LIN
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
G ++ + E+L ++ +K V+ Y+T++++ + A ++ EM+ G+ P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ YS L G+ + K+A LL+ +++++ P+VV + ++ G + +A +
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M K GV P++ T+ +LM GY V + KA +V M GV P ++ ++
Sbjct: 423 NKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVA 482
Query: 347 KMVDE---ALNLLEEMDYE 362
+ DE A+N L+ D E
Sbjct: 483 GLTDESNKAINALKCKDIE 501
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V D + F RM +MR+ ++ FN ++ V+ + M+ + + +T +
Sbjct: 276 VRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYST 335
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++N G A V ++K G PD ++ L KG + +A + + ++ +
Sbjct: 336 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES 395
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ + V + T+I+G C G + A+ + ++ G+ P + + T++ +VK A
Sbjct: 396 -RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAE 454
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID 260
++ M G+ P T+ L + + G ++ ++ + K+I+
Sbjct: 455 EVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 501
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 220/487 (45%), Gaps = 37/487 (7%)
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
T N LI+ + G+ A ++ + +LK G DT+TFNT+I HG L A +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
+G D TY L++ G EAALE R+I G+ P V + ++ LC+ K+V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL------------- 256
+ + +EM I + + ++ + G + QA L + L
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 257 -------------------KNIDP---DVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+N+ DV+ YN+++ A GK +A ++ M QG
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
PD TY+SL V+ V++A+ + M G P ++Y MI ++ ++ +A++
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
L E M+ + PN+V Y SLI+G ++G V A + M G ++ I S + A
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
K +++ + K+ D PD+ N +L G + +A+ +F L +KG +
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVI 725
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
++ TM+ G+ DEA+ + +M ++G + D +F +++ G+ + +L EM
Sbjct: 726 SFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Query: 535 -IARDLL 540
+ R LL
Sbjct: 786 LVERKLL 792
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 178/395 (45%), Gaps = 6/395 (1%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLH-RALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
G D + +N +IK KLH +AL + QG D+ TY +L L + +
Sbjct: 510 GQRNDVLEYNVMIKAYG-KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
A +L + G KP Y +I S ++ L+S A DLY M G+ PN V Y +LI
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
GF G +++AI M + + + L+ A K G + EA+ + M P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
DV +S++ + V++A +FNA+ +G T +V S+ M+Y + M+DEA+ +
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYNSFLDALCK 415
EEM ++ + +++ ++ G++S EL EM V R D T+ + L K
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKK 807
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
G + ++ ++ ++ +P + T I G A E Q+L ++
Sbjct: 808 GGVPSEAVSQLQTAYNEA-KP-LATPAITATLFSAMGLYAYALESCQELTSGEIPREHFA 865
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
YN +I G D AL +M++ G D +T
Sbjct: 866 YNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT 900
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 186/414 (44%), Gaps = 6/414 (1%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
++E+N ++ + K K + A+SL + M+ G P+ T N L + A +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
+L G P T+ +I G L A+ ++ + G + ++V Y +LING + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
E A++ R +E G++ ++ ++I + KV + A +Y +M P+V +
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+++ +G + +A + + + K DV+++ ++ G + EA + M +
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRES 753
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARRGVTPNVQSYNIMIYGLCKIKMVDE 351
G+ D +++ +M Y ++++ ++F+ M R + + ++ + L K + E
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSE 813
Query: 352 ALNLLEEMDYE-KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
A++ L+ E K + ++L + G + A E E+ P + YN+ +
Sbjct: 814 AVSQLQTAYNEAKPLATPAITATLFSAM---GLYAYALESCQELTSGEIPREHFAYNAVI 870
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
+D + ++ +KG++PD+ T L+ K G ++ + V L
Sbjct: 871 YTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 148/319 (46%), Gaps = 24/319 (7%)
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
PNV+ Y+ ++ G+ + EM + P TY +LVD GK G V+EA
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF--------------------NAMA 325
+ M ++ PD VT ++++ + E ++A F N A
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 326 RRGVTPNVQSY-NIMIYGLCKIKMVDEALNLLEEMDYEKIIPN-KVTYSSLIDGLCKTGK 383
+ V N++ + ++ ++ + ++++L+ D P T+++LID K G+
Sbjct: 263 QSPV--NLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGR 320
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
+++A L EM G P D +T+N+ + H+ + +L+KK+ +KGI PD TYNI
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
LL G I+ A E ++ + K G + T+ +++ LC+ + E ++++M+ N
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNS 440
Query: 504 CIHDPITFETIISALFEKG 522
D + I+ +G
Sbjct: 441 IRIDEHSVPVIMQMYVNEG 459
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 8/295 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ +++M P + N +L+ S A S+ + G T + ++
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFAT 729
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ-FHDDVLAQ 152
++ + +G A V + + G D +FN ++ G+L + FH+ ++ +
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVER 789
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP--TVVMYNTIIDSLCKVKLVS 210
LD T+ TL L K G A+ L+ KP T + T+ ++ L +
Sbjct: 790 KLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEA-KPLATPAITATLFSAM---GLYA 845
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
+A + E+ + I Y+A+IY + G + A+ M K ++PD+VT LV
Sbjct: 846 YALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
GK G V K + + + ++P + ++ D Y N + A V M+
Sbjct: 906 GIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEMS 960
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 179/380 (47%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ +S F++ +M ++ ++ L K++++ + R + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I + G A V I + NTLI L +G+L +A F D
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ + V++ LI G EAA ++ + ++P+VV YN++I LC+ + A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L +MI K I PN VT+ L+ G C G+ +A L+ +M + P +V Y IL+ LG
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
K G++ EAK +L M K+ +KPDVV Y+ L++ C V +A V M +G PN
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+Y +MI G C+I+ D LN+L M + P T+ ++ GL K G + +A +L+ M
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 395 HVRGQPADIITYNSFLDALC 414
+ + + L LC
Sbjct: 423 GKKNLSFGSGAWQNLLSDLC 442
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 188/390 (48%), Gaps = 2/390 (0%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
A S+ + G+ D ++++LI L Q V + + + + LI
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
K G + A+++ +I T+ NT+I+ L + A + + P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
N V+++ LI GF + A + DEM+ + P VVTYN L+ L + + +AK++L
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
MIK+ ++P+ VT+ LM G C E N+A+ + M RG P + +Y I++ L K
Sbjct: 245 EDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
+DEA LL EM +I P+ V Y+ L++ LC +V A+ +L EM ++G + TY
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
+D C+ D G+ ++ ++ P T+ ++ GL K G + A V + + K
Sbjct: 365 RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGK 424
Query: 467 KGYNLNNWTYNTMINGLCKE--GLFDEALT 494
K + + + +++ LC + G++ EAL+
Sbjct: 425 KNLSFGSGAWQNLLSDLCIKDGGVYCEALS 454
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 183/369 (49%), Gaps = 8/369 (2%)
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
E AL L + + G + Y+++I L K S FD +++ NV +L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAK----SRNFDAVDQILRLVRYRNVRCRESL 118
Query: 235 IYG----FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
G + G + +AI + ++ + + + N L++ L G++ +AK+
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
++P+ V+++ L+ G+ + A VF+ M V P+V +YN +I LC+ +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
+A +LLE+M ++I PN VT+ L+ GLC G+ + A +L+ +M RG ++ Y +
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
L K +D+ L+ ++ + I+PD+ YNIL++ LC R+ +A V ++ KG
Sbjct: 299 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 358
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
N TY MI+G C+ FD L +++ M + P TF +++ L + G D A +
Sbjct: 359 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFV 418
Query: 531 LREMIARDL 539
L M ++L
Sbjct: 419 LEVMGKKNL 427
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
SFF+ MR+ P + FN ++ + + A + +M + P+ VT N LI
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
C A S+L +++K+ P+ +TF L+KGLC G+ + A + D+ +G +
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
V Y L++ L K G+ + A LL ++ R IKP VV+YN +++ LC V A+ + +E
Sbjct: 292 VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 351
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M KG PN TY +I GFC + + +L+ M+ P T+ +V L K G
Sbjct: 352 MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGN 411
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
+ A +L VM K+ + + +L+ C+
Sbjct: 412 LDHACFVLEVMGKKNLSFGSGAWQNLLSDLCI 443
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 36/353 (10%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+VD + F+++ I N ++ LV A S + + PN V+ N
Sbjct: 131 SVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFN 190
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI +A V +L+ P +T+N+LI LC + + +A +D++ +
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ + VT+ L+ GLC G+ A +L+ +E RG KP +V Y ++ L K + A
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L EM + I P+VV Y+ L+ C ++ +A +L EM +K P+ TY +++
Sbjct: 311 KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI-- 368
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
DG+C + + + +V NAM P
Sbjct: 369 ---------------------------------DGFCRIEDFDSGLNVLNAMLASRHCPT 395
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC-KTGKV 384
++ M+ GL K +D A +LE M + + + +L+ LC K G V
Sbjct: 396 PATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 193/380 (50%), Gaps = 3/380 (0%)
Query: 48 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSA 107
RI P I F V+ + K S A+ + +M +LN L++ G+
Sbjct: 78 RIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKM 137
Query: 108 FSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLING 167
L++I + G PD T+N LI G G AL+ D+++ + + VT+ TLI+G
Sbjct: 138 KERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHG 196
Query: 168 LCKMGQTEAALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
LCK + + AL++ ++ G++PTV +Y ++I +LC++ +S AF L E I
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV 256
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ YS LI G+ + +L+EM K PD VTYN+L++ E A +L
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M+++G+KPDV++Y+ ++ + + + +A +F M RRG +P+ SY I+ GLC+
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
+EA +L+EM ++ P + + LC++GK+ +++ +H RG D +
Sbjct: 377 LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVW 435
Query: 407 NSFLDALCKGHHVDKGIALI 426
+ + +CK + I L+
Sbjct: 436 SVMIPTMCKEPVISDSIDLL 455
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 172/339 (50%), Gaps = 8/339 (2%)
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL---K 245
I PT +++ +I+ + KL S A ++ EM V + ++L+ G+L K
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+ + +DE PD TYNIL+ + G +A + M+K+ VKP VT+ +L+
Sbjct: 139 ERLSSIDEFG----KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 194
Query: 306 DGYCLVNEVNKARDVFNAMAR-RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
G C + V +A + + M + GV P V Y +I LC+I + A L +E KI
Sbjct: 195 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 254
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
+ YS+LI L K G+ + +L+EM +G D +TYN ++ C + +
Sbjct: 255 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 314
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
++ ++++KG++PD+ +YN++L + + ++A +F+D+ ++G + + +Y + +GLC
Sbjct: 315 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ F+EA ++ +M G E + L E G+
Sbjct: 375 EGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 174/363 (47%), Gaps = 4/363 (1%)
Query: 136 HGKL-HRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVV 194
GKL RAL D++ Q + +L++ L K G+ E E L I+ G KP
Sbjct: 95 RGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDAC 153
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
YN +I + A L+ EM+ K + P VT+ LI+G C ++K+A+ + +M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 255 V-LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNE 313
+ + + P V Y L+ AL + G++ A + + +K D YS+L+
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
N+ + M+ +G P+ +YN++I G C + A +L+EM + + P+ ++Y+
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
++ + K A L ++M RG D ++Y D LC+G ++ ++ +++ KG
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEAL 493
+P L LC+ G+++ +V L +G + ++ MI +CKE + +++
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMCKEPVISDSI 452
Query: 494 TLM 496
L+
Sbjct: 453 DLL 455
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 186/390 (47%), Gaps = 17/390 (4%)
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKP------TVVMYNTIIDSLCKVKLVSH 211
V+ L + L + AA++L R + P +++ Y+ II L K+
Sbjct: 6 SVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKM--- 62
Query: 212 AFDLYSEMIAK-----GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
FD +++ I P + + +I F +A+ + DEM V +
Sbjct: 63 -FDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSL 121
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
N L+ AL K G++ + K L+ + + G KPD TY+ L+ G + A +F+ M +
Sbjct: 122 NSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSLIDGLCKTGKVS 385
+ V P ++ +I+GLCK V EAL + +M + P Y+SLI LC+ G++S
Sbjct: 181 KKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELS 240
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A++L DE + D Y++ + +L K ++ +++++ +KG +PD TYN+L+
Sbjct: 241 FAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLI 300
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
+G C + A V ++ +KG + +YN ++ + ++EA L M GC
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMI 535
D +++ + L E + ++A +L EM+
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 2/227 (0%)
Query: 312 NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
E+ K ++ +++ G P+ +YNI+I+G + D+AL L +EM +K+ P VT+
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 372 SSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
+LI GLCK +V A ++ +M V G + Y S + ALC+ + L +
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+ I+ D Y+ L+ L K GR + + +++ +KG + TYN +ING C E +
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
A ++ +M + G D I++ I+ F + ++A L +M R
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 143/298 (47%), Gaps = 14/298 (4%)
Query: 255 VLKNIDPD-----------VVTYNILVDALGKEGKVREAKN-MLAVMIKQGVKPDVVTYS 302
+ +N DP+ ++ Y+I++ LG E +L + + P + +
Sbjct: 28 LFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFC 87
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
++++ + ++A +F+ M + V+S N ++ L K +++ L +D E
Sbjct: 88 NVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSID-E 146
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
P+ TY+ LI G ++G +A +L DEM + +T+ + + LCK V +
Sbjct: 147 FGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEA 206
Query: 423 IALIKKIID-KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
+ + ++ G++P + Y L+ LC+ G + A ++ + ++ ++ Y+T+I+
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
L K G +E ++ +M + GC D +T+ +I+ + +++ A ++L EM+ + L
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 198/456 (43%), Gaps = 36/456 (7%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P+ + +I L G L + L+ D++ +QG +Y LIN + G+ E +LEL
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF-DLYSEMIAKGISPNVVTYSALIYGFC 239
L R++ I P+++ YNT+I++ + L L++EM +GI P++VTY+ L+
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 240 IVG-----------------------------------QLKQAIGLLDEMVLKNIDPDVV 264
I G +L++ LL EM PD+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+YN+L++A K G ++EA + M G P+ TYS L++ + + R +F M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
P+ +YNI+I + E + L +M E I P+ TY +I K G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
+A ++L M Y ++A + ++ + + + G P + T++ L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
L + G +K+++ + L G N T+N I + G F+EA+ ME + C
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
D T E ++S D+ + EM A D+L
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDIL 594
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 218/461 (47%), Gaps = 3/461 (0%)
Query: 78 QMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHG 137
+M G++ + + LIN + G+ ++ +L + P +T+NT+I C G
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARG 224
Query: 138 KLHRA--LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVM 195
L L ++ +G Q D VTY TL++ G + A + R + GI P +
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 196 YNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
Y+ ++++ K++ + DL EM + G P++ +Y+ L+ + G +K+A+G+ +M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
P+ TY++L++ G+ G+ + + + M PD TY+ L++ +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
+ +F+ M + P++++Y +I+ K + ++A +L+ M I+P+ Y+ +I
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
+ + A + MH G I T++S L + +G V + A++ +++D GI
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
+ T+N ++ + G+ ++A + + D+ K + + T +++ L DE
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+M+ + + + + +++ + D +LL EM++
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS 625
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 207/461 (44%), Gaps = 45/461 (9%)
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
++ K Y D + + L G + R L D+ L+ +A + G
Sbjct: 66 SVEKGKYSYDVESLINKLSSLPPRGSIARCL----DIFKNKLSLND--FALVFKEFAGRG 119
Query: 173 QTEAALELLRRIEGRGI--KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
+ +L L + ++ R I KP +Y +I L + L+ +++ EM ++G+S +V +
Sbjct: 120 DWQRSLRLFKYMQ-RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG------------- 277
Y+ALI + G+ + ++ LLD M + I P ++TYN +++A + G
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 278 -------------------KVR----EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEV 314
+R EA+ + M G+ PD+ TYS L++ + + +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 315 NKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
K D+ MA G P++ SYN+++ K + EA+ + +M PN TYS L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 375 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI 434
++ ++G+ + +L EM D TYN ++ +G + + + L ++++ I
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 435 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 494
+PDM TY ++ K G +DA+++ Q + ++ Y +I + L++EAL
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 495 LMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+ M + G TF +++ + G ++E +L ++
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 220/508 (43%), Gaps = 2/508 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPNFVTLNI 93
+ ++ +RM +I+P I+ +N V+ + + + + L +M GI P+ VT N
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ G A V + G PD T++ L++ +L + ++ + G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D +Y L+ K G + A+ + +++ G P Y+ +++ +
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+ EM + P+ TY+ LI F G K+ + L +MV +NI+PD+ TY ++ A
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
GK G +A+ +L M + P Y+ +++ + +A FN M G P++
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
++++ ++Y + +V E+ +L + I N+ T+++ I+ + GK A + +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M D T + L VD+ +++ I P + Y ++L K R
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTER 612
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMING-LCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
D E+ +++ + + MI G + + ++ K+ GC +
Sbjct: 613 WDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYN 672
Query: 513 TIISALFEKGENDKAEKLLREMIARDLL 540
++ AL+ G+ ++A ++L E R L
Sbjct: 673 ALLDALWWLGQKERAARVLNEATKRGLF 700
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 11/401 (2%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P I +N +L + K+ A+ + QM+ G TPN T ++L+N G+ +
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ PD T+N LI+ G + D++ + + D TY +I K
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G E A ++L+ + I P+ Y +I++ + L A ++ M G +P++ T
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
+ +L+Y F G +K++ +L +V I + T+N ++A + GK EA M
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K PD T +++ Y V++ R+ F M + P++ Y +M+ K + D
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN--AWEL----LDEMHVRGQPADII 404
+ LLEEM + N+V+ + G G + W++ LD+++ G I
Sbjct: 615 DVNELLEEM-----LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIR 669
Query: 405 TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
YN+ LDAL ++ ++ + +G+ P++ N L+
Sbjct: 670 FYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 201/419 (47%), Gaps = 8/419 (1%)
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+L+N+ + D +N I GL + A + ++ + D VT A LI L
Sbjct: 260 LLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLR 319
Query: 170 KMGQT-EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNV 228
K G++ + E+ ++ +G+K + ++ ++ S C L A + +EM KGI N
Sbjct: 320 KAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNT 379
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAV 288
+ Y+ L+ + +++ GL EM K + P TYNIL+DA + + + +L
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNK-ARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M G++P+V +Y+ L+ Y +++ A D F M + G+ P+ SY +I+
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK---TGKVSNAWELLDEMHVRGQPADII 404
++A EEM E I P+ TY+S++D + TGK+ W+L+ ++G I
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT---RI 556
Query: 405 TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
TYN+ LD K + ++ + G+QP + TYN+L++ + G+ ++ +++
Sbjct: 557 TYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Query: 465 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
++ TY+TMI + F A M +G + DP ++E + + L +K +
Sbjct: 617 AALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAK 675
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 175/357 (49%), Gaps = 5/357 (1%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL-QFHDDVLAQGFQLDQVTYATLI 165
A+ V + K +PD +T LI L G+ + + + + + +G + Q + L+
Sbjct: 292 AWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLV 351
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
C G E AL + +E +GI+ ++YNT++D+ K + L++EM KG+
Sbjct: 352 KSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLK 411
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE-AKN 284
P+ TY+ L+ + Q LL EM ++P+V +Y L+ A G+ K+ + A +
Sbjct: 412 PSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAAD 471
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
M K G+KP +Y++L+ Y + KA F M + G+ P+V++Y ++
Sbjct: 472 AFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFR 531
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
+ + + + + M EKI ++TY++L+DG K G A +++ E G ++
Sbjct: 532 RSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVM 591
Query: 405 TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
TYN ++A +G K L+K++ ++PD TY+ ++ R++D + F
Sbjct: 592 TYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFV---RVRDFKRAF 645
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 174/394 (44%), Gaps = 8/394 (2%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTT-SAFSVLANI 114
+N ++ L ++ Y A + M+ + P+ VT ILI G++ + + +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
++G F L+K C G AL ++ +G + + + Y TL++ K
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
E L + +G+KP+ YN ++D+ + L EM G+ PNV +Y+ L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 235 IYGFCIVGQLKQAIGLLDEMVLK----NIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
I + G+ K+ + + L+ + P +Y L+ A G +A M
Sbjct: 456 ISAY---GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K+G+KP V TY+S++D + + K +++ M R + +YN ++ G K +
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA +++ E + P+ +TY+ L++ + G+ + +LL EM D ITY++ +
Sbjct: 573 EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
A + + K ++ G PD +Y L
Sbjct: 633 YAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 173/382 (45%), Gaps = 39/382 (10%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV-KLVSHAFDLYSEM 219
Y I+GL + + A E+ ++ + P V +I +L K + ++++ +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
KG+ + + L+ FC G ++A+ + EM K I + + YN L+DA K +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
E + + M +G+KP TY+ LMD Y + + + M G+ PNV+SY +
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 340 I--YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
I YG K KM D A + M + P+ +Y++LI +G A+ +EM
Sbjct: 456 ISAYGRTK-KMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM--- 511
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
CK +GI+P + TY +LD + G
Sbjct: 512 ----------------CK----------------EGIKPSVETYTSVLDAFRRSGDTGKL 539
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
E+++ + ++ TYNT+++G K+GL+ EA ++S+ G +T+ +++A
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599
Query: 518 LFEKGENDKAEKLLREMIARDL 539
G++ K +LL+EM A +L
Sbjct: 600 YARGGQDAKLPQLLKEMAALNL 621
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 173/375 (46%), Gaps = 2/375 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAI-SLSRQMEITGITPNFVTLNI 93
DD + M ++ + P + ++T+L K + + + +M G+ +
Sbjct: 290 DDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGG 349
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ C G A + + K+G +TI +NTL+ + ++ +G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH-A 212
+ TY L++ + Q + LLR +E G++P V Y +I + + K +S A
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMA 469
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
D + M G+ P+ +Y+ALI+ + + G ++A +EM + I P V TY ++DA
Sbjct: 470 ADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ G + + +M+++ +K +TY++L+DG+ +ARDV + ++ G+ P+
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPS 589
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YN+++ + + LL+EM + P+ +TYS++I + A+
Sbjct: 590 VMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHK 649
Query: 393 EMHVRGQPADIITYN 407
M GQ D +Y
Sbjct: 650 MMVKSGQVPDPRSYE 664
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 7/276 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++++ F M + P +N ++ + + +L R+ME G+ PN +
Sbjct: 394 HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 93 ILINCHCYLGQTTSAFSVLANILKR----GYHPDTITFNTLIKGLCLHGKLHRALQFHDD 148
LI+ + G+T + A+ R G P + ++ LI + G +A ++
Sbjct: 454 CLISAY---GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 149 VLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
+ +G + TY ++++ + G T +E+ + + IK T + YNT++D K L
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
A D+ SE G+ P+V+TY+ L+ + GQ + LL EM N+ PD +TY+
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
++ A + + A +M+K G PD +Y L
Sbjct: 631 MIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYST-AISLSRQMEITGITPNFVTLNILINC 97
+ M + + P + + ++++ +TK S A +M+ G+ P+ + LI+
Sbjct: 435 TLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHA 494
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
+ G A++ + K G P T+ +++ G + ++ +L + +
Sbjct: 495 YSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT 554
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
++TY TL++G K G A +++ G++P+V+ YN ++++ + + L
Sbjct: 555 RITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLK 614
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
EM A + P+ +TYS +IY F V K+A MV PD +Y L L +
Sbjct: 615 EMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKA 674
Query: 278 KVREAKNMLAVM 289
K + K+ A++
Sbjct: 675 KTKNRKDKTAIL 686
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 186/380 (48%), Gaps = 2/380 (0%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+N+++ K + + A L M+ + + T ILI + G + A +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
G PD I F+ +I L + A F D L F+ D + Y L+ G C+ G+
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A ++ + ++ GI+P V Y+ +ID+LC+ +S A D++++M+ G +PN +T++ L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G+ ++ + + ++M +PD +TYN L++A ++ + A +L MIK+ +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
+ T++++ +VN A +++ M PN +YNI++ K D L +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALC 414
+EMD +++ PN TY L+ C G +NA++L EM + + Y L L
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLR 512
Query: 415 KGHHVDKGIALIKKIIDKGI 434
+ + K L++K+I KG+
Sbjct: 513 RAGQLKKHEELVEKMIQKGL 532
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 212/447 (47%), Gaps = 14/447 (3%)
Query: 72 AISLS-RQMEITGITPNFVTLNILINC----HCYLGQTTSAFSVLANILKRGYHPDTITF 126
A+SL Q+E + ++P+ V ++ C H + AF A H +
Sbjct: 96 ALSLDFSQIETSQVSPSVVRC-VIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPY 154
Query: 127 NTLIKGLCLHGKLHR---ALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR 183
N +I L GK+ + A D + ++ ++ T+ LI + G A+ R
Sbjct: 155 NEMID---LSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
+E G P + ++ +I +L + + S A + + + P+V+ Y+ L+ G+C G+
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGE 270
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+ +A + EM L I+P+V TY+I++DAL + G++ A ++ A M+ G P+ +T+++
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
LM + K V+N M + G P+ +YN +I C+ + ++ A+ +L M +K
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
N T++++ + K V+ A + +M + +TYN + D +
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF-KKGYNLNNWTYNTMING 482
+ K++ DK ++P++ TY +L+ C G +A ++F+++ +K + Y ++
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPI 509
L + G + L+ KM G + P+
Sbjct: 511 LRRAGQLKKHEELVEKMIQKGLVARPL 537
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 168/345 (48%), Gaps = 1/345 (0%)
Query: 196 YNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
YN +ID KV+ A+ L M ++ + ++ T++ LI + G +A+ + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
PD + ++I++ L ++ + EA++ + K +PDV+ Y++L+ G+C E++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
+A VF M G+ PNV +Y+I+I LC+ + A ++ +M PN +T+++L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
K G+ ++ ++M G D ITYN ++A C+ +++ + ++ +I K +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
+ T+N + + K + A ++ + + N TYN ++ D L +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+M+D + T+ +++ G + A KL +EM+ L
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCL 497
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
SFF+ L+ R P +I + ++ + S A + ++M++ GI PN T +I+I+
Sbjct: 242 SFFDS-LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
C GQ + A V A++L G P+ ITFN L++ G+ + LQ ++ + G + D
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+TY LI C+ E A+++L + + + +NTI + K + V+ A +YS+
Sbjct: 361 ITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSK 420
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ PN VTY+ L+ F + + EM K ++P+V TY +LV G
Sbjct: 421 MMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGH 480
Query: 279 VREAKNMLAVMIKQG-VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
A + M+++ + P + Y ++ ++ K ++ M ++G+
Sbjct: 481 WNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+ + F M I P + ++ V+ +L + S A + M +G PN +T N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ H G+T V + K G PDTIT+N LI+ C L A++ + ++ +
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+++ T+ T+ + K A + ++ +P V YN ++ K
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDA 272
+ EM K + PNV TY L+ FC +G A L EMV K + P + Y +++
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 273 LGKEGKVREAKNMLAVMIKQGV 294
L + G++++ + ++ MI++G+
Sbjct: 511 LRRAGQLKKHEELVEKMIQKGL 532
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 217/479 (45%), Gaps = 7/479 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+N L + H+ A L M+ G P+ ILI H + + V +
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
K G+ P +N ++ L +G AL ++D G + T+ L+ GLCK G+ E
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
LE+L+R+ KP V Y +I +L + + ++ EM I P+V+ Y L+
Sbjct: 281 EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLV 340
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G C G++++ L EM K I D Y +L++ +GKVR A N+ ++ G
Sbjct: 341 VGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI 400
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
D+ Y++++ G C VN+V+KA +F + P+ ++ + ++ + + + N+
Sbjct: 401 ADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNV 460
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCK-TGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
LE + E P + LC K + A ++ + +G + YN ++AL
Sbjct: 461 LERIG-ELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGH-GSVSVYNILMEALY 518
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
K + K ++L ++ G +PD +Y+I + + G +K A + + + +
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE-KGENDKAEKLLR 532
Y ++ GLC+ G D + L+ + N P+ F+ ++ KG N AEK+++
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRECLGN-VESGPMEFKYALTVCHVCKGSN--AEKVMK 634
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 226/508 (44%), Gaps = 45/508 (8%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
+ +M + P + +N+++ +LVK ++ A+++ + G+ T IL+ C
Sbjct: 216 YEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCK 275
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G+ +L + + PD + +IK L G L +L+ D++ + D +
Sbjct: 276 AGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y TL+ GLCK G+ E EL ++G+ I +Y +I+ V A +L+ +++
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT--------------- 265
G ++ Y+A+I G C V Q+ +A L + + ++PD T
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 266 -YNILVDALGKEGK--------------VREAKNMLAV----MIKQGVKPDVVTYSSLMD 306
++ +++ +G+ G E KN +A+ ++K V Y+ LM+
Sbjct: 456 DFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILME 515
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
+ ++ K+ +F M + G P+ SY+I I + V A + E++ +P
Sbjct: 516 ALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVP 575
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEM--HVRGQPADIITYNSFLDALCKGHHVDKGIA 424
+ Y SL GLC+ G++ L+ E +V P + Y + +CKG + +K +
Sbjct: 576 SIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPME-FKYALTVCHVCKGSNAEKVMK 634
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY--NLNNWTYNTMING 482
++ ++ +G+ + Y ++ G+ K G IK A+EVF +L K+ + Y M+
Sbjct: 635 VVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIE 694
Query: 483 LCKEGLFDEALT------LMSKMEDNGC 504
K+ D L+ L SK+ GC
Sbjct: 695 QTKKKTADLVLSGIKFFGLESKLRAKGC 722
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 177/413 (42%), Gaps = 34/413 (8%)
Query: 145 FHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
FH +G++ D Y L + G AA +L ++ +G P+ + +I
Sbjct: 145 FHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHA 204
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+ + +Y +M G P V Y+ ++ G A+ + ++ + +
Sbjct: 205 DNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEEST 264
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
T+ ILV L K G++ E +L M + KPDV Y++++ ++ + V++ M
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
R + P+V +Y ++ GLCK V+ L EM ++I+ ++ Y LI+G GKV
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKV 384
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
+A L +++ G ADI YN+ + LC + VDK L + I++ ++PD T + +
Sbjct: 385 RSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPI 444
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNW------------------------------ 474
+ R+ D V + + + GY ++++
Sbjct: 445 MVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGH 504
Query: 475 ----TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
YN ++ L K G ++L+L +M G D ++ I EKG+
Sbjct: 505 GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%)
Query: 257 KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK 316
K D YN L + G R A + +M QG P + L+ + +
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 317 ARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID 376
V+ M + G P V YN ++ L K D AL + E+ + ++ T+ L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
GLCK G++ E+L M D+ Y + + L ++D + + ++ I+P
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
D+ Y L+ GLCK GR++ E+F ++ K ++ Y +I G +G A L
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 497 SKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ D+G I D + +I L + DKA KL + I +L
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 177/404 (43%), Gaps = 16/404 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+D ++ ++ M + I P ++ + ++ L K L +M+ I +
Sbjct: 313 NLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYR 372
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI G+ SA ++ +++ GY D +N +IKGLC ++ +A + + +
Sbjct: 373 VLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK-VKLVSH 211
+ D T + ++ M + +L RI G P LC + +
Sbjct: 433 ELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY-PVSDYLTQFFKLLCADEEKNAM 491
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A D++ + KG +V Y+ L+ +G +++++ L EM +PD +Y+I +
Sbjct: 492 ALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAIC 550
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
++G V+ A + +I+ P + Y SL G C + E++ + R
Sbjct: 551 CFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAV-----MLLVRECLG 605
Query: 332 NVQS------YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
NV+S Y + + +CK ++ + +++EM+ E + N+V Y ++I G+ K G +
Sbjct: 606 NVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIK 665
Query: 386 NAWELLDEMHVRG--QPADIITYNSFLDALCKGHHVDKGIALIK 427
A E+ E+ R AD++ Y L K D ++ IK
Sbjct: 666 VAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIK 709
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 299 VTYSSLMDGYCLVNEVNKARDVFN-AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
VT S + + L N+ A F+ A ++G + +YN Y L + A L E
Sbjct: 123 VTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPE 182
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
MD + P++ + LI + + + ++M G + YN +DAL K
Sbjct: 183 LMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNG 242
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+ D +A+ + + G+ + T+ IL+ GLCK GRI++ E+ Q + + + + Y
Sbjct: 243 YFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYT 302
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
MI L EG D +L + +M + D + + T++ L + G ++ +L EM +
Sbjct: 303 AMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 538 DLL 540
+L
Sbjct: 363 QIL 365
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 176/347 (50%), Gaps = 6/347 (1%)
Query: 160 TYATLINGLCKMGQTEAA---LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
Y +++ L KM Q A +E +R+ + I+P ++ ++ +V A ++
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVL 206
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
EM G P+ + L+ C G +K A L ++M ++ ++ + L+ +
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRV 265
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
GK+ EAK +L M + G +PD+V Y++L+ GY ++ A D+ M RRG PN Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
++I LCK+ ++EA+ + EM+ + + VTY++L+ G CK GK+ + +LD+M
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
+G +TY + A K ++ + L++K+ PD+ YN+++ CK G +K+
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
A ++ ++ + G + T+ MINGL +G EA +M G
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 207/477 (43%), Gaps = 40/477 (8%)
Query: 46 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG---ITPNFVTLNILINCHCYLG 102
Q R I + ++ L K + + L +M I P +L+
Sbjct: 140 QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASAD 197
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
A VL + K G+ PD F L+ LC HG + A + +D+ + F ++ +
Sbjct: 198 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFT 256
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
+L+ G C++G+ A +L ++ G +P +V Y ++ ++ A+DL +M +
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G PN Y+ LI C V ++++A+ + EM + DVVTY LV K GK+ +
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+L MIK+G+ P +TY +M + + ++ M + P++ YN++I
Sbjct: 377 YIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 436
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
CK+ V EA+ L EM+ + P T+ +I+GL G + A + EM RG
Sbjct: 437 ACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG---- 492
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
+ + + + T +LL+ + K +++ A++V+
Sbjct: 493 LFSVSQY-----------------------------GTLKLLLNTVLKDKKLEMAKDVWS 523
Query: 463 DLFKKGY-NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+ KG LN ++ I+ L +G EA + +M + + P TF ++ L
Sbjct: 524 CITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGL 580
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 171/352 (48%), Gaps = 6/352 (1%)
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG---ISPNVVTYSALIYGFCIVGQLKQAI 248
++ +Y +++ L K++ + L EM + I P + + L+ F +K+AI
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAI 203
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
+LDEM +PD + L+DAL K G V++A + M + ++ ++SL+ G+
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGW 262
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C V ++ +A+ V M G P++ Y ++ G + +A +LL +M PN
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
Y+ LI LCK ++ A ++ EM AD++TY + + CK +DK ++
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
+I KG+ P TY ++ K ++ E+ + + + Y+ + YN +I CK G
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
EA+ L ++ME+NG TF +I+ L +G +A +EM+ R L
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 188/406 (46%), Gaps = 7/406 (1%)
Query: 51 PPIIE---FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSA 107
P +IE F ++ AI + +M G P+ L++ C G A
Sbjct: 178 PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDA 237
Query: 108 FSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLING 167
+ ++ R + + F +L+ G C GK+ A + GF+ D V Y L++G
Sbjct: 238 AKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
G+ A +LLR + RG +P Y +I +LCKV + A ++ EM +
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
VVTY+AL+ GFC G++ + +LD+M+ K + P +TY ++ A K+ E ++
Sbjct: 357 VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M + PD+ Y+ ++ C + EV +A ++N M G++P V ++ IMI GL
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Query: 348 MVDEALNLLEEMDYEKI--IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADII 404
+ EA + +EM + + T L++ + K K+ A ++ + +G +++
Sbjct: 477 CLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVL 536
Query: 405 TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
++ ++ AL + + + ++I+ P T+ L+ GL K
Sbjct: 537 SWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKK 582
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 176/377 (46%), Gaps = 14/377 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V D F M +MR + F +L + A + QM G P+ V
Sbjct: 233 SVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYT 291
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L++ + G+ A+ +L ++ +RG+ P+ + LI+ LC ++ A++ ++
Sbjct: 292 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 351
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ D VTY L++G CK G+ + +L + +G+ P+ + Y I+ + K +
Sbjct: 352 ECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEEC 411
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L +M P++ Y+ +I C +G++K+A+ L +EM + P V T+ I+++
Sbjct: 412 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK------ARDVFNAMAR 326
L +G + EA + M+ +G+ V Y +L L+N V K A+DV++ +
Sbjct: 472 LASQGCLLEASDHFKEMVTRGL-FSVSQYGTLK---LLLNTVLKDKKLEMAKDVWSCITS 527
Query: 327 RGVTP-NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
+G NV S+ I I+ L EA + EM +P T++ L+ GL K
Sbjct: 528 KGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNRE 587
Query: 386 NAWELLDEMHVRGQPAD 402
A E+ ++ VR A+
Sbjct: 588 FAGEITEK--VRNMAAE 602
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 192/414 (46%), Gaps = 11/414 (2%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTS--AFSVLAN 113
+N ++ ++ +S A L M G P+ ++ N LIN G T A +L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ G PD IT+NTL+ L A++ +D+ A Q D TY +I+ + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
A L +E +G P V YN+++ + + + ++Y +M G + +TY+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 234 LIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+I+ + GQL A+ L +M L +PD +TY +L+D+LGK + EA +++ M+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
G+KP + TYS+L+ GY + +A D F+ M R G P+ +Y++M+ L + +A
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH--VRGQPADIITYNSFL 410
L +M + P+ Y +I GL K + + + + +M P +I +
Sbjct: 528 WGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISS----- 582
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
L KG D +K I G + + T +L GR +A E+ + L
Sbjct: 583 -VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFL 635
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 186/376 (49%), Gaps = 4/376 (1%)
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
A ++ L + Q A+E+ R E + V +YN ++ + S A +L M
Sbjct: 195 AAILGVLGRWNQESLAVEIFTRAEP-TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQ 253
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQ--AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+G P++++++ LI G L A+ LLD + + PD +TYN L+ A ++ +
Sbjct: 254 RGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNL 313
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
A + M +PD+ TY++++ Y +A +F + +G P+ +YN +
Sbjct: 314 DGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSL 373
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH-VRG 398
+Y + + ++ + ++M +++TY+++I K G++ A +L +M + G
Sbjct: 374 LYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSG 433
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
+ D ITY +D+L K + + AL+ +++D GI+P + TY+ L+ G K G+ ++A+
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAE 493
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+ F + + G +N Y+ M++ L + +A L M +G +E +I L
Sbjct: 494 DTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGL 553
Query: 519 FEKGENDKAEKLLREM 534
++ +D +K +R+M
Sbjct: 554 MKENRSDDIQKTIRDM 569
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 205/461 (44%), Gaps = 13/461 (2%)
Query: 49 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAF 108
+ P I +N +L++ + + A+ + ME P+ T N +I+ + G A
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
+ + +G+ PD +T+N+L+ + + + + GF D++TY T+I+
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 169 CKMGQTEAALELLRRIEG-RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
K GQ + AL+L + ++G G P + Y +IDSL K A L SEM+ GI P
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
+ TYSALI G+ G+ ++A M+ PD + Y++++D L + + R+A +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR-GVTPNVQSYNIMIYGLCKI 346
MI G P Y ++ G N + + M G+ P ++ ++++ G C
Sbjct: 533 DMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP-LEISSVLVKGEC-F 590
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
+ L + YE + N T S++ +G+ S A+ELL+ + + +
Sbjct: 591 DLAARQLKVAITNGYE--LEND-TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLIT 647
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC----GRIKDAQEVFQ 462
+ + CK +++ AL + D + + + + L C +A +VF
Sbjct: 648 EALIVLHCKVNNL--SAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFS 705
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
DL G + +M+ CK G + A ++++ E G
Sbjct: 706 DLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKG 746
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 185/402 (46%), Gaps = 15/402 (3%)
Query: 144 QFHDDVL-AQGFQLDQVTYATLINGLCKMGQT--EAALELLRRIEGRGI-KPTVVMYNTI 199
QF D+L A+ Q+ Y ++ + GQ + ALE+ + R P M I
Sbjct: 141 QFVADILDARLVQMTPTDYCFVVKSV---GQESWQRALEVFEWLNLRHWHSPNARMVAAI 197
Query: 200 IDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
+ L + S A ++++ + V Y+A++ + G+ +A L+D M +
Sbjct: 198 LGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGC 256
Query: 260 DPDVVTYNILVDALGKEGKVRE--AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
PD++++N L++A K G + A +L ++ G++PD +TY++L+ + ++ A
Sbjct: 257 VPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA 316
Query: 318 RDVFNAMARRGVTPNVQSYNIMI--YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
VF M P++ +YN MI YG C + EA L E++ + P+ VTY+SL+
Sbjct: 317 VKVFEDMEAHRCQPDLWTYNAMISVYGRCGL--AAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID-KGI 434
+ E+ +M G D +TYN+ + K +D + L K + G
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 435 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 494
PD TY +L+D L K R +A + ++ G TY+ +I G K G +EA
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 495 LMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
S M +G D + + ++ L E KA L R+MI+
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/538 (21%), Positives = 234/538 (43%), Gaps = 44/538 (8%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+ ML+ P + ++ +L L++ A L R M G TP++ ++I
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 101 LGQTTSAFSVLANILKR-GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
++ + ++ + G +P I+ + L+KG C R L+ + G++L+
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGECFD-LAARQLKV---AITNGYELEND 610
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY--- 216
T +++ G+ A ELL ++ ++ +I CKV +S A D Y
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFAD 670
Query: 217 ----------------------------------SEMIAKGISPNVVTYSALIYGFCIVG 242
S++ G + +++ +C +G
Sbjct: 671 PCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLG 730
Query: 243 QLKQAIGLLDEMVLKNIDPDVVT-YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
+ A ++++ K Y +++A GK+ ++A++++ + + G PD+ T+
Sbjct: 731 FPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTW 790
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+SLM Y +AR +FN M R G +P V+S NI+++ LC ++E ++EE+
Sbjct: 791 NSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQD 850
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+K + ++D + G + ++ M G I Y ++ LCKG V
Sbjct: 851 MGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
++ ++ + + ++ +N +L K +V+Q + + G + TYNT+I
Sbjct: 911 AEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLII 970
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
C++ +E LM +M + G T++++ISA ++ ++AE+L E++++ L
Sbjct: 971 MYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 214/521 (41%), Gaps = 31/521 (5%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+D V F M R P + +N +++ + + A L ++E+ G P+ VT N
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA- 151
L+ T V + K G+ D +T+NT+I G+L ALQ + D+
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G D +TY LI+ L K +T A L+ + GIKPT+ Y+ +I K
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A D +S M+ G P+ + YS ++ + ++A GL +M+ P Y +++
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 272 ALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
L KE + + + + M + G+ P ++ S L+ G C F+ AR+
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGEC-----------FDLAARQLKV 599
Query: 331 PNVQSYNIMIYGLCKI-------KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
Y + L I EA LLE + ++ +LI CK
Sbjct: 600 AITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNN 659
Query: 384 VSNAWELLDEMH----VRGQPADIIT-YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
+S A LDE V G T Y + L H + + + G +
Sbjct: 660 LSAA---LDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASE 716
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN-NWTYNTMINGLCKEGLFDEALTLMS 497
++ CK G + A +V KG++ + Y +I K+ L+ +A +++
Sbjct: 717 SVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVG 776
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
+ +G D T+ +++SA + G ++A + M+ RD
Sbjct: 777 NLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM-RD 816
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/463 (19%), Positives = 199/463 (42%), Gaps = 1/463 (0%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ +L V +HY+ A + + ++G + ++ +C LG +A V+
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 116 KRGYH-PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
+G+H + + +I+ +A ++ G D T+ +L++ + G
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
E A + + G PTV N ++ +LC + + + E+ G + + +
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ F G + + + M P + Y ++++ L K +VR+A+ M++ M +
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
K ++ ++S++ Y + + K V+ + G+ P+ +YN +I C+ + +E
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
L+++M + P TY SLI K + A +L +E+ +G D Y++ +
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
K L++ + + GI+P + T ++L+ G ++A++V +L L
Sbjct: 1044 DSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTL 1103
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
Y+++I+ + ++ + + +M+ G D + + A
Sbjct: 1104 PYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 174/414 (42%), Gaps = 35/414 (8%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ ++ + K K + A S+ + +G TP+ T N L++ + G A ++ ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G P + N L+ LC+ G+L +++ GF++ + + +++ + G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM---------------- 219
++ ++ G PT+ +Y +I+ LCK K V A + SEM
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 220 -------------------IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID 260
G+ P+ TY+ LI +C + ++ L+ +M +D
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
P + TY L+ A GK+ + +A+ + ++ +G+K D Y ++M +KA +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
M G+ P + + ++++ EA +L + ++ + YSS+ID +
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI 434
+ ++ E L EM G D + F+ A + + L+K + D G
Sbjct: 1115 SKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 128/328 (39%), Gaps = 35/328 (10%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ + ++ M P I + ++ L K K A + +ME N
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++ + + V I + G PD T+NTLI
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI---------------------- 969
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ Y C+ + E L++++ G+ P + Y ++I + K K + A
Sbjct: 970 ------IMY-------CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L+ E+++KG+ + Y ++ G +A LL M I+P + T ++L+ +
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVS 1076
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
G +EA+ +L+ + V+ + YSS++D Y + N + M + G+ P+
Sbjct: 1077 YSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMD 360
+ + + K E + LL+ ++
Sbjct: 1137 HRIWTCFVRAASFSKEKIEVMLLLKALE 1164
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 193/405 (47%), Gaps = 18/405 (4%)
Query: 139 LHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL----RRIEGRGIKPTVV 194
LH ++ + + GF L + +++N LCK + E A L+ R EG + +
Sbjct: 118 LHSVFKWAE--MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLV-SAD 174
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP------NVVTYSALIYGFCIVGQLKQAI 248
+ +I + +V A + A+ P + L+ C G +++A
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCKSATELRLLEVLLDALCKEGHVREAS 232
Query: 249 GLLDEM---VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
L+ + + N P V +NIL++ + K+++A+ + M VKP VVTY +L+
Sbjct: 233 MYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLI 292
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+GYC + V A +V M + N +N +I GL + + EAL ++E +
Sbjct: 293 EGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG 352
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
P VTY+SL+ CK G + A ++L M RG TYN F K + ++G+ L
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
K+I+ G PD TY+++L LC+ G++ A +V +++ +G + + T +I+ LC+
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ +EA G I ITF+ I + L KG +D A++L
Sbjct: 473 LEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 10/329 (3%)
Query: 91 LNILINCHCYLGQTTSAFSVLANI---LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHD 147
L +L++ C G A L I + + P FN L+ G KL +A + +
Sbjct: 215 LEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 148 DVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVK 207
++ A + VTY TLI G C+M + + A+E+L ++ ++ +++N IID L +
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 208 LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYN 267
+S A + P +VTY++L+ FC G L A +L M+ + +DP TYN
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
K K E N+ +I+ G PD +TY ++ C +++ A V M R
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA 387
G+ P++ + ++I+ LC+++M++EA + IIP +T+ + +GL G A
Sbjct: 455 GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMA 514
Query: 388 WELLDEM----HVRGQPADIITYNSFLDA 412
L M H + P TY +DA
Sbjct: 515 KRLSSLMSSLPHSKKLPN---TYREAVDA 540
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 41/358 (11%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV---TYSALIYGFCIVGQL 244
G + +++++++SLCK + A+ L + + N+V T+ LI + G +
Sbjct: 130 GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMV 189
Query: 245 KQAIGLLD-----EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
+QAI + E V K+ ++ +L+DAL KEG VREA
Sbjct: 190 QQAIRAFEFARSYEPVCKSAT-ELRLLEVLLDALCKEGHVREAS---------------- 232
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
Y + G N V P+V+ +NI++ G + + + +A L EEM
Sbjct: 233 MYLERIGGTMDSNWV----------------PSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 419
+ P VTY +LI+G C+ +V A E+L+EM + + + +N +D L + +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
+ + ++++ P + TYN L+ CK G + A ++ + + +G + TYN
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
K +E + L K+ + G D +T+ I+ L E G+ A ++ +EM R
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + FN +L +++ A L +M+ + P VT LI +C + + A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
L + + + FN +I GL G+L AL + VTY +L+ CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G A ++L+ + RG+ PT YN K +LY ++I G SP+ +T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y ++ C G+L A+ + EM + IDPD++T +L+ L + + EA +
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 291 KQGVKPDVVTYSSLMDG 307
++G+ P +T+ + +G
Sbjct: 488 RRGIIPQYITFKMIDNG 504
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 115/250 (46%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ M M + P ++ + ++ + + A+ + +M++ + NF+ N +I+
Sbjct: 272 LWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLG 331
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G+ + A ++ P +T+N+L+K C G L A + ++ +G
Sbjct: 332 EAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY K +TE + L ++ G P + Y+ I+ LC+ +S A + EM
Sbjct: 392 TYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEM 451
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+GI P+++T + LI+ C + L++A D V + I P +T+ ++ + L +G
Sbjct: 452 KNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMS 511
Query: 280 REAKNMLAVM 289
AK + ++M
Sbjct: 512 DMAKRLSSLM 521
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 209/449 (46%), Gaps = 20/449 (4%)
Query: 82 TGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHR 141
+ P+ + N+LI+ + Q A S+ +L+ Y P T+ LIK C+ G + R
Sbjct: 171 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230
Query: 142 ALQFHDDVLAQGFQLDQVT--------YATLINGLCKM-GQTEAALELLRRIEGRGIKPT 192
A +V+ Q V+ Y I GL K G TE A+++ +R++ KPT
Sbjct: 231 A-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 285
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
YN +I+ K ++ LY EM + PN+ TY+AL+ F G ++A + +
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
++ ++PDV YN L+++ + G A + ++M G +PD +Y+ ++D Y
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
+ A VF M R G+ P ++S+ +++ K + V + +++EM + P+ +
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
S+++ + G+ + ++L EM ADI TYN ++ K +++ L ++ +K
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 525
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
+PD+ T+ + + EVF+++ G + T +++ E ++
Sbjct: 526 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 585
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEK 521
+++ M H +T +++ L K
Sbjct: 586 TSVLRTM------HKGVTVSSLVPKLMAK 608
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 192/423 (45%), Gaps = 4/423 (0%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
K + PD I FN LI + A + +L + + TYA LI C G E
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 176 AALELLRRIEGRGIKPT---VVMYNTIIDSLCKVKL-VSHAFDLYSEMIAKGISPNVVTY 231
A +L ++ + P V +YN I+ L K K A D++ M P TY
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ +I + + + L EM P++ TY LV+A +EG +A+ + + +
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
G++PDV Y++LM+ Y A ++F+ M G P+ SYNIM+ + + +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A + EEM I P ++ L+ K V+ ++ EM G D NS L+
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
+ K ++ ++ + D+ TYNIL++ K G ++ +E+F +L +K +
Sbjct: 470 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 529
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
+ T+ + I ++ L+ + L + +M D+GC D T + ++SA + + ++ +L
Sbjct: 530 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
Query: 532 REM 534
R M
Sbjct: 590 RTM 592
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 12/349 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N ++ + F RM + R P +N ++ K + L +M PN T
Sbjct: 266 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 325
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L+N G A + + + G PD +N L++ G + A + +
Sbjct: 326 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 153 GFQLDQVTYATLINGLCKMG---QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
G + D+ +Y +++ + G EA E ++R+ GI PT+ + ++ + K + V
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL---GIAPTMKSHMLLLSAYSKARDV 442
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
+ + EM G+ P+ ++++ + +GQ + +L EM D+ TYNIL
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
++ GK G + + + + ++ +PDVVT++S + Y K +VF M G
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
P+ + +++ + V++ ++L M VT SSL+ L
Sbjct: 563 APDGGTAKVLLSACSSEEQVEQVTSVLRTMH------KGVTVSSLVPKL 605
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 152/356 (42%), Gaps = 4/356 (1%)
Query: 44 MLQMRITPPIIE---FNKVLTSLVKTK-HYSTAISLSRQMEITGITPNFVTLNILINCHC 99
M ++P I +N + L+K K + AI + ++M+ P T N++IN +
Sbjct: 238 MQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYG 297
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
++ ++ + + P+ T+ L+ G +A + + + G + D
Sbjct: 298 KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY 357
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y L+ + G A E+ ++ G +P YN ++D+ + L S A ++ EM
Sbjct: 358 VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 417
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
GI+P + ++ L+ + + + ++ EM ++PD N +++ G+ G+
Sbjct: 418 KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQF 477
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ + +LA M D+ TY+ L++ Y + + ++F + + P+V ++
Sbjct: 478 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSR 537
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
I + K+ + L + EEM P+ T L+ +V +L MH
Sbjct: 538 IGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 593
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 39/286 (13%)
Query: 288 VMIKQGVKPDVVTYSSLMD-----------------------------------GYCLVN 312
++ K +PDV+ ++ L+D YC+
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 313 EVNKARDVFNAMARRGVTP---NVQSYNIMIYGLCKIKM-VDEALNLLEEMDYEKIIPNK 368
+ +A V M V+P V YN I GL K K +EA+++ + M ++ P
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
TY+ +I+ K K +W+L EM +I TY + ++A + +K + ++
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
+ + G++PD+ YN L++ + G A E+F + G + +YN M++ + GL
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+A + +M+ G + ++SA + + K E +++EM
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 209/449 (46%), Gaps = 20/449 (4%)
Query: 82 TGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHR 141
+ P+ + N+LI+ + Q A S+ +L+ Y P T+ LIK C+ G + R
Sbjct: 149 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 208
Query: 142 ALQFHDDVLAQGFQLDQVT--------YATLINGLCKM-GQTEAALELLRRIEGRGIKPT 192
A +V+ Q V+ Y I GL K G TE A+++ +R++ KPT
Sbjct: 209 A-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 263
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
YN +I+ K ++ LY EM + PN+ TY+AL+ F G ++A + +
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
++ ++PDV YN L+++ + G A + ++M G +PD +Y+ ++D Y
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
+ A VF M R G+ P ++S+ +++ K + V + +++EM + P+ +
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
S+++ + G+ + ++L EM ADI TYN ++ K +++ L ++ +K
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
+PD+ T+ + + EVF+++ G + T +++ E ++
Sbjct: 504 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEK 521
+++ M H +T +++ L K
Sbjct: 564 TSVLRTM------HKGVTVSSLVPKLMAK 586
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 192/423 (45%), Gaps = 4/423 (0%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
K + PD I FN LI + A + +L + + TYA LI C G E
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 176 AALELLRRIEGRGIKPT---VVMYNTIIDSLCKVKL-VSHAFDLYSEMIAKGISPNVVTY 231
A +L ++ + P V +YN I+ L K K A D++ M P TY
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ +I + + + L EM P++ TY LV+A +EG +A+ + + +
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
G++PDV Y++LM+ Y A ++F+ M G P+ SYNIM+ + + +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A + EEM I P ++ L+ K V+ ++ EM G D NS L+
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
+ K ++ ++ + D+ TYNIL++ K G ++ +E+F +L +K +
Sbjct: 448 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 507
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
+ T+ + I ++ L+ + L + +M D+GC D T + ++SA + + ++ +L
Sbjct: 508 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
Query: 532 REM 534
R M
Sbjct: 568 RTM 570
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 12/349 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N ++ + F RM + R P +N ++ K + L +M PN T
Sbjct: 244 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 303
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L+N G A + + + G PD +N L++ G + A + +
Sbjct: 304 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 153 GFQLDQVTYATLINGLCKMG---QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
G + D+ +Y +++ + G EA E ++R+ GI PT+ + ++ + K + V
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL---GIAPTMKSHMLLLSAYSKARDV 420
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
+ + EM G+ P+ ++++ + +GQ + +L EM D+ TYNIL
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
++ GK G + + + + ++ +PDVVT++S + Y K +VF M G
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
P+ + +++ + V++ ++L M VT SSL+ L
Sbjct: 541 APDGGTAKVLLSACSSEEQVEQVTSVLRTMH------KGVTVSSLVPKL 583
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 152/356 (42%), Gaps = 4/356 (1%)
Query: 44 MLQMRITPPIIE---FNKVLTSLVKTK-HYSTAISLSRQMEITGITPNFVTLNILINCHC 99
M ++P I +N + L+K K + AI + ++M+ P T N++IN +
Sbjct: 216 MQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYG 275
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
++ ++ + + P+ T+ L+ G +A + + + G + D
Sbjct: 276 KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY 335
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y L+ + G A E+ ++ G +P YN ++D+ + L S A ++ EM
Sbjct: 336 VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 395
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
GI+P + ++ L+ + + + ++ EM ++PD N +++ G+ G+
Sbjct: 396 KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQF 455
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ + +LA M D+ TY+ L++ Y + + ++F + + P+V ++
Sbjct: 456 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSR 515
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
I + K+ + L + EEM P+ T L+ +V +L MH
Sbjct: 516 IGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 39/286 (13%)
Query: 288 VMIKQGVKPDVVTYSSLMD-----------------------------------GYCLVN 312
++ K +PDV+ ++ L+D YC+
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 313 EVNKARDVFNAMARRGVTP---NVQSYNIMIYGLCKIKM-VDEALNLLEEMDYEKIIPNK 368
+ +A V M V+P V YN I GL K K +EA+++ + M ++ P
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
TY+ +I+ K K +W+L EM +I TY + ++A + +K + ++
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
+ + G++PD+ YN L++ + G A E+F + G + +YN M++ + GL
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+A + +M+ G + ++SA + + K E +++EM
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 167/335 (49%), Gaps = 3/335 (0%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDV--LAQGFQLDQVTYATLINGLCKMGQTEAALELLRR 183
F + I C K+ AL D + L G + + Y T++NG K G + AL +R
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
+ KP V +N +I+ C+ A DL+ EM KG PNVV+++ LI GF G+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+++ + + EM+ T ILVD L +EG+V +A ++ ++ + V P Y S
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L++ C N+ +A ++ + ++G TP + ++ GL K ++A +E+M
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I+P+ VT++ L+ LC + ++A L +G D TY+ + K +G
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
L+ +++DK + PD+ TYN L+DGL G+ Q
Sbjct: 459 VLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 169/327 (51%), Gaps = 5/327 (1%)
Query: 195 MYNTIIDSLCKVKLVSHA---FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
++ + ID+ C+ + + +A FD +I PNV Y+ ++ G+ G + +A+
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 252 DEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLV 311
M + PDV T+NIL++ + K A ++ M ++G +P+VV++++L+ G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 312 NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
++ + + M G + + I++ GLC+ VD+A L+ ++ ++++P++ Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
SL++ LC K A E+++E+ +GQ I + ++ L K +K ++K+++
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 432 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 491
GI PD T+N+LL LC DA + KGY + TY+ +++G KEG E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 492 ALTLMSKMEDNGCIHDPITFETIISAL 518
L+++M D + D T+ ++ L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 152/307 (49%), Gaps = 1/307 (0%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + +N V+ VK+ A+ ++M P+ T NILIN +C + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ ++G P+ ++FNTLI+G GK+ ++ +++ G + + T L++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G+ + A L+ + + + P+ Y ++++ LC A ++ E+ KG +P +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
+ L+ G G+ ++A G +++M+ I PD VT+N+L+ L +A + +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL-CKIKMV 349
+G +PD TY L+ G+ + + N M + + P++ +YN ++ GL C K
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Query: 350 DEALNLL 356
+ + +L
Sbjct: 491 RKQVRML 497
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 231 YSALIYGFCIVGQLKQAIGLLDEM-VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
+ + I +C ++ A+ D M L + P+V YN +V+ K G + +A M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
K+ KPDV T++ L++GYC ++ + A D+F M +G PNV S+N +I G +
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL-LDEMHVRGQPADIITYNS 408
+E + + EM ++ T L+DGLC+ G+V +A L LD ++ R P++ Y S
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEF-DYGS 338
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
++ LC + + + +++++ KG P L++GL K GR + A + + G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
++ T+N ++ LC +A L G D T+ ++S ++G + E
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Query: 529 KLLREMIARDLL 540
L+ EM+ +D+L
Sbjct: 459 VLVNEMLDKDML 470
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%)
Query: 86 PNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
PN N ++N + G A + K PD TFN LI G C K AL
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
++ +G + + V++ TLI G G+ E +++ + G + + ++D LC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
V A L +++ K + P+ Y +L+ C + +A+ +++E+ K P +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
LV+ L K G+ +A + M+ G+ PD VT++ L+ C + A + +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
+G P+ +Y++++ G K E L+ EM + ++P+ TY+ L+DGL TGK S
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D + F+ RM + R P + FN ++ ++ + A+ L R+M+ G PN V+ N
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI G+ + +++ G T L+ GLC G++ A D+L +
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ Y +L+ LC + A+E++ + +G P + T+++ L K A
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+M+ GI P+ VT++ L+ C A L K +PD TY++LV
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSG 447
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
KEG+ +E + ++ M+ + + PD+ TY+ LMDG
Sbjct: 448 FTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDG 482
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 154/307 (50%), Gaps = 1/307 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHY-STAISLSRQMEITGITPNFVTLNI 93
+ +S F +ML+ TP N++L LV + Y A L + + G+ PN + N+
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ C + A+ + +L+R PD ++ LI+G C G+++ A++ DD+L +G
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
F D+++Y TL+N LC+ Q A +LL R++ +G P +V YNT+I C+ A
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ +M++ G SPN V+Y LI G C G + L+EM+ K P N LV
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
GKV EA +++ V++K G T+ ++ C +E K + + +T +
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 435
Query: 334 QSYNIMI 340
+ ++ I
Sbjct: 436 RIVDVGI 442
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 138/266 (51%)
Query: 172 GQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
G + A EL + G+ P YN ++ + C +S A+ L+ +M+ + + P+V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
LI GFC GQ+ A+ LLD+M+ K PD ++Y L+++L ++ ++REA +L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
+G PD+V Y++++ G+C + AR V + M G +PN SY +I GLC M DE
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
LEEM + P+ + L+ G C GKV A ++++ + G+ T+ +
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPD 437
+C +K ++ + + I D
Sbjct: 409 LICNEDESEKIKLFLEDAVKEEITGD 434
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 174/385 (45%), Gaps = 47/385 (12%)
Query: 138 KLHRALQFH--DDVLAQ----GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
KL R F+ DDVLA+ G+ L + LI + E L ++ P
Sbjct: 93 KLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTP 152
Query: 192 TVVMYNTIIDSLCKVK-LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
N I+D L + + AF+L+ G+ PN +Y+ L+ FC+ L A L
Sbjct: 153 QPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQL 212
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
+M+ +++ PDV +Y IL+ ++G+V A +L M+ +G PD ++Y++L++ C
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCR 272
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
++ +A + M +G P++ YN MI G C+ +A +L++M PN V+
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
Y +LI GLC G + L+EM I
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEM-----------------------------------I 357
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
KG P N L+ G C G++++A +V + + K G L++ T+ +I +C E D
Sbjct: 358 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE---D 414
Query: 491 EALTLMSKMEDNGCIHDPITFETII 515
E+ + +ED + + IT +T I
Sbjct: 415 ESEKIKLFLED--AVKEEITGDTRI 437
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 169/334 (50%), Gaps = 9/334 (2%)
Query: 213 FDLYSEMIAKGISP------NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
F+L +++AK S + TY +Y + + + + +M+ N P
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPE--KVLSTFYKMLEFNFTPQPKHL 157
Query: 267 NILVDAL-GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
N ++D L G +++A + GV P+ +Y+ LM +CL ++++ A +F M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
R V P+V SY I+I G C+ V+ A+ LL++M + +P++++Y++L++ LC+ ++
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A++LL M ++G D++ YN+ + C+ ++ ++ G P+ +Y L+
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
GLC G + ++ +++ KG++ + N ++ G C G +EA ++ + NG
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMIARDL 539
T+E +I + + E++K + L + + ++
Sbjct: 398 LHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 431
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 138/274 (50%), Gaps = 3/274 (1%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
L++L++ YL + AF + + G P+T ++N L++ CL+ L A Q +L
Sbjct: 161 LDVLVSHRGYLQK---AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
+ D +Y LI G C+ GQ A+ELL + +G P + Y T+++SLC+ +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A+ L M KG +P++V Y+ +I GFC + A +LD+M+ P+ V+Y L+
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
L +G E K L MI +G P + L+ G+C +V +A DV + + G T
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+ ++ ++I +C ++ LE+ E+I
Sbjct: 398 LHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 431
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
V+ + + ML P + + +L SL + A L +M++ G P+ V N
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I C + A VL ++L G P+++++ TLI GLC G ++ ++++++
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 359
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
GF L+ G C G+ E A +++ + G + +I +C
Sbjct: 360 GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 1/348 (0%)
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
F++ + + + A R+ GIKP V + ++ SLC K V+HA
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ + + GI P+ TYS L+ G+ + A + DEM+ +N D++ YN L+DAL
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
K G V M M G+KPD +++ + YC +V+ A V + M R + PNV
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
++N +I LCK + VD+A LL+EM + P+ TY+S++ C +V+ A +LL
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC-KCG 452
M D TYN L L + D+ + + + ++ P + TY +++ GL K G
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
++++A F+ + +G + T + N L G D L KME
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 156/337 (46%), Gaps = 1/337 (0%)
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
+ + + L S A ++ M+ GI P V L++ C + A +
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
I P TY+ILV + A+ + M+++ D++ Y++L+D C +V+
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
+F M G+ P+ S+ I I+ C V A +L+ M ++PN T++ +I L
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 323
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
CK KV +A+ LLDEM +G D TYNS + C V++ L+ ++ PD
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDR 383
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC-KEGLFDEALTLMS 497
TYN++L L + GR A E+++ + ++ + TY MI+GL K+G +EA
Sbjct: 384 HTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFE 443
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
M D G T E + + L G+ D + L +M
Sbjct: 444 MMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
+ A +++ G P + L+ LC ++ A +F G TY+ L
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
+ G ++ A ++ + R ++ YN ++D+LCK V + ++ EM G+
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
P+ +++ I+ +C G + A +LD M ++ P+V T+N ++ L K KV +A
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
+L MI++G PD TY+S+M +C EVN+A + + M R P+ +YN+++ L
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC-KTGKVSNAWELLDEMHVRGQP 400
+I D A + E M K P TY+ +I GL K GK+ A + M G P
Sbjct: 395 RIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIP 451
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 157/332 (47%), Gaps = 8/332 (2%)
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN----IDPDVVT 265
+H F L++ I + ++ +Y L+ I+G KQ L D ++ +
Sbjct: 85 AHRFFLWARRIP-DFAHSLESYHILVE---ILGSSKQFALLWDFLIEAREYNYFEISSKV 140
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
+ I+ A + EA M++ G+KP V L+ C VN A++ F
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
G+ P+ ++Y+I++ G +I+ A + +EM + + + Y++L+D LCK+G V
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
+++ EM G D ++ F+ A C V ++ ++ + P++ T+N ++
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
LCK ++ DA + ++ +KG N + WTYN+++ C + A L+S+M+ C+
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 506 HDPITFETIISALFEKGENDKAEKLLREMIAR 537
D T+ ++ L G D+A ++ M R
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 5/294 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
FNRM++ I P + + +++L SL KH + A + + GI P+ T +IL+
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+ + A V +L+R D + +N L+ LC G + + ++ G + D +
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+A I+ C G +A ++L R++ + P V +N II +LCK + V A+ L EMI
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
KG +P+ TY++++ C ++ +A LL M PD TYN+++ L + G+
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV---FNAMARRGVTP 331
A + M ++ P V TY+ ++ G LV + K + F M G+ P
Sbjct: 401 RATEIWEGMSERKFYPTVATYTVMIHG--LVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 1/291 (0%)
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+A + MV I P V + L+ +L + V A+ G+ P TYS L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
G+ + + + AR VF+ M R ++ +YN ++ LCK VD + +EM +
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
P+ +++ I C G V +A+++LD M ++ T+N + LCK VD L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+ ++I KG PD TYN ++ C + A ++ + + + TYN ++ L +
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALF-EKGENDKAEKLLREMI 535
G FD A + M + T+ +I L +KG+ ++A + MI
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMI 446
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 3/223 (1%)
Query: 321 FNAMARR--GVTPNVQSYNIMIYGLCKIKMVDEALN-LLEEMDYEKIIPNKVTYSSLIDG 377
F ARR +++SY+I++ L K + L+E +Y + + +
Sbjct: 88 FFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRA 147
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
+ S A + M G + + L +LC HV+ K GI P
Sbjct: 148 YSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPS 207
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
TY+IL+ G + A++VF ++ ++ ++ YN +++ LCK G D +
Sbjct: 208 AKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQ 267
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+M + G D +F I A + G+ A K+L M DL+
Sbjct: 268 EMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV 310
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 215/474 (45%), Gaps = 70/474 (14%)
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
+N+LI G+ A +V + + G+ P I++ TL+ + + + +V
Sbjct: 52 MNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVE 107
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
G +LD + + +IN + G E A++ L +++ G+ PT YNT
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNT------------ 155
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NID--PDVVTYN 267
LI G+ I G+ +++ LLD M+ + N+D P++ T+N
Sbjct: 156 -----------------------LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD--VFNAMA 325
+LV A K+ KV EA ++ M + GV+PD VTY+++ Y E +A V +
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK----- 380
+ PN ++ I++ G C+ V + L + M ++ N V ++SLI+G +
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 381 --------------------TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
G ++L M AD+ITY++ ++A +++
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
K + K+++ G++PD Y+IL G + K A+E+ + L + N + T+I
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVI 431
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+G C G D+A+ + +KM G + TFET++ E + KAE++L+ M
Sbjct: 432 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 485
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 208/442 (47%), Gaps = 31/442 (7%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ + F + + P +I + +L ++ K Y + S+ ++E +G + + N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG-- 153
N G A L + + G +P T T+NTLIKG + GK R+ + D +L +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 154 -FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS-LCKVKLVSH 211
+ T+ L+ CK + E A E+++++E G++P V YNTI + K + V
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 212 AFDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
++ +M+ K PN T ++ G+C G+++ + + M ++ ++V +N L+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 271 D---------------------ALGKE----GKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+ + +E G + +L +M + VK DV+TYS++M
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+ + + KA VF M + GV P+ +Y+I+ G + K +A LLE + E
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-R 421
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
PN V ++++I G C G + +A + ++M G +I T+ + + + K +
Sbjct: 422 PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Query: 426 IKKIIDKGIQPDMCTYNILLDG 447
++ + G++P+ T+ +L +
Sbjct: 482 LQMMRGCGVKPENSTFLLLAEA 503
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 226/487 (46%), Gaps = 16/487 (3%)
Query: 58 KVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKR 117
K++ L++ A ++ + + TG P+ ++ L+ Q S S+++ + +
Sbjct: 50 KLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G D+I FN +I G + A+Q + G TY TLI G G+ E +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 178 LELLRRIEGRG---IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
ELL + G + P + +N ++ + CK K V A+++ +M G+ P+ VTY+ +
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 235 IYGFCIVGQLKQAIG-LLDEMVLKN-IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+ G+ +A ++++MV+K P+ T I+V +EG+VR+ + M +
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
V+ ++V ++SL++G+ V + RD + + +T + S+N + + KM +
Sbjct: 290 RVEANLVVFNSLINGFVEVMD----RDGIDEVT---LTLLLMSFNEEVELVGNQKMKVQV 342
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
L L++E + + + +TYS++++ G + A ++ EM G D Y+
Sbjct: 343 LTLMKECNVKADV---ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
+ K L++ +I + +P++ + ++ G C G + DA VF + K G + N
Sbjct: 400 YVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
T+ T++ G + +A ++ M G + TF + A G D++ K +
Sbjct: 459 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAIN 518
Query: 533 EMIARDL 539
+ +D+
Sbjct: 519 ALKCKDI 525
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 23/245 (9%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V D + F RM +MR+ ++ FN ++ V+ M+ GI + VTL +
Sbjct: 276 VRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV------------MDRDGI--DEVTLTL 321
Query: 94 LI---NCHCYL-GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
L+ N L G VL + + D IT++T++ G + +A Q ++
Sbjct: 322 LLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRR--IEGRGIKPTVVMYNTIIDSLCKVK 207
+ G + D Y+ L G + + + A ELL +E R P VV++ T+I C
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNG 438
Query: 208 LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYN 267
+ A ++++M G+SPN+ T+ L++G+ V Q +A +L M + P+ T+
Sbjct: 439 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFL 498
Query: 268 ILVDA 272
+L +A
Sbjct: 499 LLAEA 503
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 39/208 (18%)
Query: 370 TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKI 429
+ + L++ L + G+ A + + G +I+Y + L A+ +++ ++
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 430 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING------- 482
G + D +N +++ + G ++DA + + + G N TYNT+I G
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 483 -------------------------------LCKEGLFDEALTLMSKMEDNGCIHDPITF 511
CK+ +EA ++ KME+ G D +T+
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 512 ETIISALFEKGENDKAE-KLLREMIARD 538
TI + +KGE +AE +++ +M+ ++
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKE 254
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 221/479 (46%), Gaps = 22/479 (4%)
Query: 66 TKHYSTAISLSRQMEITG--ITPN--FVTLNILINCHCYLGQTTSAFSVLANILKRGYHP 121
T+ Y + + +++I+G I P + L I H Y A V + G+ P
Sbjct: 86 TREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIY----DKAIEVYTGMSSFGFVP 141
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL- 180
+T N ++ ++ AL+ + + + F ++ ++ C G + +
Sbjct: 142 NTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLVGVK 197
Query: 181 --LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
L+R+ G G P + I+ C+ VS AF + MI GIS +V +S L+ GF
Sbjct: 198 IVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGF 257
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
G+ ++A+ L ++M+ P++VTY L+ G V EA +L+ + +G+ PD+
Sbjct: 258 FRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDI 317
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
V + ++ Y + +AR VF ++ +R + P+ ++ ++ LC D +
Sbjct: 318 VLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG 377
Query: 359 M--DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+ D++ + N ++ + K G S A ++L M + D TY +L ALC+G
Sbjct: 378 IGTDFDLVTGNLLS-----NCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRG 432
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
I + K II + D ++ ++D L + G+ A +F+ + Y L+ +Y
Sbjct: 433 GAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSY 492
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
I GL + +EA +L M++ G + T+ TIIS L ++ E +K K+LRE I
Sbjct: 493 TVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 212/453 (46%), Gaps = 10/453 (2%)
Query: 69 YSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNT 128
Y AI + M G PN +N++++ + L A + I R + +F+
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDI 179
Query: 129 LIKGLCLHGKLHRALQFH---DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
+ C G + ++ +GF ++ + ++ C+ G A +++ +
Sbjct: 180 ALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMI 239
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
GI +V +++ ++ + A DL+++MI G SPN+VTY++LI GF +G +
Sbjct: 240 CSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVD 299
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+A +L ++ + + PD+V N+++ + G+ EA+ + + K+ + PD T++S++
Sbjct: 300 EAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL 359
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
CL + + + + + G ++ + N++ KI AL +L M Y+
Sbjct: 360 SSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFA 416
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
+ TY+ + LC+ G A ++ + + D +++ +D+L + + + L
Sbjct: 417 LDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHL 476
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
K+ I + D+ +Y + + GL + RI++A + D+ + G N TY T+I+GLCK
Sbjct: 477 FKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCK 536
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
E ++ ++ + G DP T + S L
Sbjct: 537 EKETEKVRKILRECIQEGVELDPNTKFQVYSLL 569
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 166/362 (45%), Gaps = 7/362 (1%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
RM+ P F ++L +T S A + M +GI+ + ++L++ G
Sbjct: 202 RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSG 261
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ A + +++ G P+ +T+ +LIKG G + A V ++G D V
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
+I+ ++G+ E A ++ +E R + P + +I+ SLC +S FDL I
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC----LSGKFDLVPR-ITH 376
Query: 223 GISPN--VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
GI + +VT + L F +G A+ +L M K+ D TY + + AL + G R
Sbjct: 377 GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPR 436
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A M ++IK+ D +S+++D + + N A +F +V SY + I
Sbjct: 437 AAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAI 496
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
GL + K ++EA +L +M I PN+ TY ++I GLCK + ++L E G
Sbjct: 497 KGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVE 556
Query: 401 AD 402
D
Sbjct: 557 LD 558
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 7/307 (2%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
V FN+M+Q+ +P ++ + ++ V A ++ +++ G+ P+ V N++I+
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
+ LG+ A V ++ KR PD TF +++ LCL GK + + G
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDF 382
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D VT L N K+G AL++L + + Y + +LC+ A +Y
Sbjct: 383 DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY 442
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+I + + +SA+I +G+ A+ L +L+ DVV+Y + + L +
Sbjct: 443 KIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRA 502
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT--PNV- 333
++ EA ++ M + G+ P+ TY +++ G C E K R + + GV PN
Sbjct: 503 KRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTK 562
Query: 334 -QSYNIM 339
Q Y+++
Sbjct: 563 FQVYSLL 569
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 315 NKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
+KA +V+ M+ G PN ++ N+M+ K+ +V+ AL + E + + + S
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHF 184
Query: 375 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI 434
+ G + +L M G + + L C+ V + ++ +I GI
Sbjct: 185 CSRGGR-GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGI 243
Query: 435 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 494
+ +++L+ G + G + A ++F + + G + N TY ++I G G+ DEA T
Sbjct: 244 SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 495 LMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
++SK++ G D + +I G ++A K+ + R L+
Sbjct: 304 VLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLV 349
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 219/507 (43%), Gaps = 69/507 (13%)
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L C C G A ++ ++ GY+ D + + L+K C + A++ + ++ +
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS 302
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
F+LD + TLI+G K+G + + ++ +G++ V Y+ +I S CK V +A
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 214 DLY-SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL--- 269
L+ + ++ IS NV Y+ LI+GF G + +A+ LL M+ I PD +TY +L
Sbjct: 363 RLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKM 422
Query: 270 ----------------------------VDALGK-EGKV--------REAKNMLAV---- 288
+D LG E KV R+ N+ AV
Sbjct: 423 LPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAV 482
Query: 289 --------------------MIKQGVKPDVVTYSSLMDGYCLVNE--VNKARDVFNAMAR 326
M+ G P +Y+S++ CL E + + N +
Sbjct: 483 VTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK--CLFQENIIEDLASLVNIIQE 540
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
P+V +Y I++ LCK D A +++ M+ + P YSS+I L K G+V
Sbjct: 541 LDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE 600
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
A E +M G D I Y ++ + +D+ L+++++ ++P TY +L+
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Query: 447 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
G K G ++ + + + G + N Y +I K+G F + TL M +N H
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH 720
Query: 507 DPITFETIISALFEKGENDKAEKLLRE 533
D I + T++S L+ K +++ E
Sbjct: 721 DHIAYITLLSGLWRAMARKKKRQVIVE 747
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 216/474 (45%), Gaps = 15/474 (3%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
+S +M+ + TP +N V+ L + SL ++ P+ T I++N
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
C +AF+++ + + G P ++++I L G++ A + +L G Q
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D++ Y +IN + G+ + A EL+ + ++P+ Y +I K+ ++
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+M+ G+SPNVV Y+ALI F G K + L M +I D + Y L+ L +
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 277 GKVREAKNMLAVMIKQGV-------KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
++ + ++ K+ + KP V SSL + + A +V + ++ +
Sbjct: 736 MARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGN----YGSKSFAMEVIGKV-KKSI 790
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
PN+ +N +I G C +DEA N LE M E I+PN VTY+ L+ + G + +A +
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAID 850
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
L + + +P D + Y++ L LC +AL+ ++ GI P+ +Y LL LC
Sbjct: 851 LFEGTNC--EP-DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
+A +V +D+ + + +I LC+E EA L + M +G
Sbjct: 908 YSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/569 (22%), Positives = 234/569 (41%), Gaps = 69/569 (12%)
Query: 39 SFFN-RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
+F+N R++ I P + ++ LVK + + A + ++ +G P+ + +++++
Sbjct: 116 TFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDE 175
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG-FQL 156
C + AF + +RG L KGLC HG L+ A+ D + L
Sbjct: 176 LCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPL 235
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
Y +L CK G A L +E G VMY ++ CK ++ A LY
Sbjct: 236 PVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
M+ + + ++ LI+GF +G L + + +M+ K + +V TY+I++ + KE
Sbjct: 296 LRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE 355
Query: 277 GKV------------------------------------REAKNMLAVMIKQGVKPDVVT 300
G V +A ++L M+ G+ PD +T
Sbjct: 356 GNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHIT 415
Query: 301 Y--------------------SSLMDGYCLVN----------EVNKARDVFNAMARRGVT 330
Y S++D C +N EV K + +AR+
Sbjct: 416 YFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEV-KVESLLGEIARKDAN 474
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
++ LC + AL+ +E+M P +Y+S+I L + + + L
Sbjct: 475 LAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASL 534
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
++ + D+ TY ++ LCK + D A+I + + G++P + Y+ ++ L K
Sbjct: 535 VNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGK 594
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
GR+ +A+E F + + G + Y MIN + G DEA L+ ++ + T
Sbjct: 595 QGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFT 654
Query: 511 FETIISALFEKGENDKAEKLLREMIARDL 539
+ +IS + G +K + L +M+ L
Sbjct: 655 YTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 220/509 (43%), Gaps = 31/509 (6%)
Query: 33 NVDDTVSFF-NRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPN---- 87
NVD + F N I+ + + ++ K A+ L +M GI P+
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Query: 88 FVTLNILINCHCYLGQTTSAFSVLANILKRG--YHPDTIT--FNTLIKGLCLHGKLHRAL 143
FV L +L CH + A +L +IL G +P I N +K L G++ R
Sbjct: 417 FVLLKMLPKCH----ELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR-- 470
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
+ L V A + LC AAL + ++ G P YN++I L
Sbjct: 471 --------KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Query: 204 CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDV 263
+ ++ L + + P+V TY ++ C A ++D M + P V
Sbjct: 523 FQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTV 582
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
Y+ ++ +LGK+G+V EA+ A M++ G++PD + Y +++ Y +++A ++
Sbjct: 583 AIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEE 642
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
+ + + P+ +Y ++I G K+ M+++ L++M + + PN V Y++LI K G
Sbjct: 643 VVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGD 702
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI-----KKIIDKGIQPDM 438
++ L M D I Y + L L + K +I +K++ + I+
Sbjct: 703 FKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKP 762
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
+ L G A EV + KK N + +NT+I G C G DEA +
Sbjct: 763 LVS--IPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLES 819
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKA 527
M+ G + + +T+ ++ + E G+ + A
Sbjct: 820 MQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 173/403 (42%), Gaps = 42/403 (10%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D + + M ++ + P + ++ ++ SL K A +M +GI P+ + I+
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
IN + G+ A ++ ++K P + T+ LI G G + + Q+ D +L G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV-------- 206
+ V Y LI K G + + L + IK + Y T++ L +
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQ 743
Query: 207 --------KLV----------------------SHAFDLYSEMIAKGISPNVVTYSALIY 236
KL+ S A ++ + + K I PN+ ++ +I
Sbjct: 744 VIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIIT 802
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
G+C G+L +A L+ M + I P++VTY IL+ + + G + A ++ +P
Sbjct: 803 GYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEP 859
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
D V YS+L+ G C A + M + G+ PN SY ++ LC ++ EA+ ++
Sbjct: 860 DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVV 919
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
++M I P + ++ LI LC+ K+ A L M G+
Sbjct: 920 KDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 176/442 (39%), Gaps = 67/442 (15%)
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL-RRIEGRGIKPTVVMYNTIIDSLCK 205
D + G +LD Y LI L +MGQ A +R+ G GI P + ++++ L K
Sbjct: 84 DFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVK 143
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYS--------------------------------- 232
++ A +IA G +P+ + S
Sbjct: 144 LRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWC 203
Query: 233 --ALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
L G C G L +AIG+LD + + + V Y L K G EA+ + M
Sbjct: 204 CKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHM 263
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
G D V Y+ LM YC N + A ++ M R + +N +I+G K+ M+
Sbjct: 264 EVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGML 323
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL-LDEMHVRGQPADIITYNS 408
D+ + +M + + N TY +I CK G V A L ++ ++ Y +
Sbjct: 324 DKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTN 383
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
+ K +DK + L+ +++D GI PD TY +LL L KC +K A + Q + G
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Query: 469 YNLNNWTYNTMIN-----------------------------GLCKEGLFDEALTLMSKM 499
+N + + N LC + + AL+ + KM
Sbjct: 444 CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503
Query: 500 EDNGCIHDPITFETIISALFEK 521
+ GC P ++ ++I LF++
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQE 525
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 163/376 (43%), Gaps = 21/376 (5%)
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
+LI L + G ++A E++RR+ ID + + D +
Sbjct: 48 SLIVKLGRRGLLDSAREVIRRV---------------IDGSSSISEAALVADF---AVDN 89
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN-IDPDVVTYNILVDALGKEGKVRE 281
GI + Y ALI +GQ A ++ V+ N I PD + +V L K + E
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 282 AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
A+ L +I G P + S ++D C + +A F + RG + +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVT-YSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
GLC ++EA+ +L+ + +P V Y SL CK G + A L D M V G
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
D + Y + CK +++ + L +++++ + D C +N L+ G K G + + +
Sbjct: 270 VDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVM 329
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI-TFETIISALF 519
F + KKG N +TY+ MI CKEG D AL L + I + + +I +
Sbjct: 330 FSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFY 389
Query: 520 EKGENDKAEKLLREMI 535
+KG DKA LL M+
Sbjct: 390 KKGGMDKAVDLLMRML 405
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 110/261 (42%), Gaps = 2/261 (0%)
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA-MARRGVTPNVQSYN 337
+ EA + + G++ D Y +L+ + + A +N + G+ P+ +
Sbjct: 76 ISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLD 135
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
M++ L K++ DEA L+ + P++ + S ++D LC + A+ +++ R
Sbjct: 136 SMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKER 195
Query: 398 GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP-DMCTYNILLDGLCKCGRIKD 456
G + LC H+++ I ++ + P + Y L CK G +
Sbjct: 196 GSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAE 255
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
A+ +F + GY ++ Y ++ CK+ A+ L +M + DP F T+I
Sbjct: 256 AEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIH 315
Query: 517 ALFEKGENDKAEKLLREMIAR 537
+ G DK + +MI +
Sbjct: 316 GFMKLGMLDKGRVMFSQMIKK 336
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 152/314 (48%), Gaps = 5/314 (1%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+ L++ LCK G + LLRR+ R +KP +N + C+V+ A L EM
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID---PDVVTYNILVDALGKE 276
I G P TY A I FC G + +A L D M+ K P T+ +++ AL K
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
K E ++ MI G PDV TY +++G C+ +V++A + M+ +G P++ +Y
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
N + LC+ + DEAL L M + P+ TY+ LI + A+ EM
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
R D+ TY + ++ L H + L++++++KG++ ++ L L + G +K
Sbjct: 475 RDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKA 534
Query: 457 AQEVFQDLFKKGYN 470
+V + + KK YN
Sbjct: 535 IHKVSEHM-KKFYN 547
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 39/300 (13%)
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
P + ++ L+ C G +K+ LL M + + PD T+N+L + ++A +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT---PNVQSYNIMIYG 342
L MI+ G KP+ TY + +D +C V++A D+F+ M +G P +++ +MI
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
L K +E L+ M +P+ TY +I+G+C KV A++ LDEM +G P D
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL----------------- 445
I+TYN FL LC+ D+ + L ++++ P + TYN+L+
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 446 ------------------DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+GL C R K+A + +++ KG L +++ + L + G
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 139/282 (49%), Gaps = 4/282 (1%)
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
P++ +N+L+DAL K G V+E + +L M + VKPD T++ L G+C V + KA +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII---PNKVTYSSLIDG 377
M G P +Y I C+ MVDEA +L + M + P T++ +I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
L K K +EL+ M G D+ TY ++ +C VD+ + ++ +KG PD
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+ TYN L LC+ + +A +++ + + + TYN +I+ + D A +
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+M+ C+ D T+ +I+ LF+ +A LL E++ + L
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 4/268 (1%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
+ ++++ P I FN +L +L K +L R+M + P+ T N+L C +
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVR 282
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT-- 160
A +L +++ G+ P+ T+ I C G + A D ++ +G + T
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 161 -YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+A +I L K + E EL+ R+ G P V Y +I+ +C + V A+ EM
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
KG P++VTY+ + C + +A+ L MV P V TYN+L+ +
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDG 307
A N M K+ DV TY ++++G
Sbjct: 463 DGAFNTWTEMDKRDCVQDVETYCAMING 490
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 3/266 (1%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
R ++ R+ P FN + + + A+ L +M G P T I+ C G
Sbjct: 258 RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 103 QTTSAFSVLANILKRGYH---PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
A + ++ +G P TF +I L + K + +++ G D
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY +I G+C + + A + L + +G P +V YN + LC+ + A LY M
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ +P+V TY+ LI F + A EM ++ DV TY +++ L +
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLM 305
+EA +L ++ +G+K + S +
Sbjct: 498 KEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 97/250 (38%), Gaps = 38/250 (15%)
Query: 34 VDDTVSFFNRML---QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVT 90
VD+ F+ M+ P F ++ +L K L +M TG P+ T
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
+I C + A+ L + +GY PD +T+N ++ LC + K AL+
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL----- 433
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
Y ++ C P+V YN +I ++
Sbjct: 434 ----------YGRMVESRC--------------------APSVQTYNMLISMFFEMDDPD 463
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
AF+ ++EM + +V TY A+I G + K+A LL+E+V K + ++ +
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Query: 271 DALGKEGKVR 280
L + G ++
Sbjct: 524 MRLSEVGNLK 533
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 166/325 (51%), Gaps = 2/325 (0%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRG 118
V+ + + AI ME + PN V N L++ C A V N+ R
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR- 232
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
+ PD+ T++ L++G L +A + +++ G D VTY+ +++ LCK G+ + AL
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
++R ++ KPT +Y+ ++ + + A D + EM G+ +V +++LI F
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C ++K +L EM K + P+ + NI++ L + G+ EA ++ MIK +PD
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDA 411
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
TY+ ++ +C E+ A V+ M ++GV P++ +++++I GLC+ + +A LLEE
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGK 383
M I P+ VT+ L L K +
Sbjct: 472 MIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 173/349 (49%), Gaps = 3/349 (0%)
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
R + +V Y+ +I+S K++ +DL + M K + NV T+ ++ + ++ +
Sbjct: 128 RHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDE 186
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
AI + M ++ P++V +N L+ AL K VR+A+ + M + PD TYS L++
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLE 245
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
G+ + KAR+VF M G P++ +Y+IM+ LCK VDEAL ++ MD P
Sbjct: 246 GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
YS L+ ++ A + EM G AD+ +NS + A CK + + ++
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
K++ KG+ P+ + NI+L L + G +A +VF+ + K + TY +I C++
Sbjct: 366 KEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD-TYTMVIKMFCEK 424
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+ A + M G TF +I+ L E+ KA LL EMI
Sbjct: 425 KEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 174/354 (49%), Gaps = 4/354 (1%)
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
L+ T+ ++ + + + A+ +E + P +V +N ++ +LCK K V A ++
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ M + +P+ TYS L+ G+ L +A + EM+ PD+VTY+I+VD L K
Sbjct: 226 FENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
G+V EA ++ M KP YS L+ Y N + +A D F M R G+ +V
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
+N +I CK + +L+EM + + PN + + ++ L + G+ A+++ +M
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
+P D TY + C+ ++ + K + KG+ P M T+++L++GLC+ +
Sbjct: 405 KVCEP-DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 509
A + +++ + G + T+ + L KE D L KM N +++P+
Sbjct: 464 KACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM--NVLVNEPL 515
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 159/329 (48%), Gaps = 8/329 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD+ + FN M + + P ++ FN +L++L K+K+ A + M TP+ T +I
Sbjct: 184 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSI 242
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+ A V ++ G HPD +T++ ++ LC G++ AL +
Sbjct: 243 LLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 302
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ Y+ L++ + E A++ +E G+K V ++N++I + CK + + +
Sbjct: 303 CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVY 362
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ EM +KG++PN + + ++ G+ +A + +M+ K +PD TY +++
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMF 421
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
++ ++ A + M K+GV P + T+S L++G C KA + M G+ P+
Sbjct: 422 CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSG 481
Query: 334 QSYNIMIYGLCK------IKMVDEALNLL 356
++ + L K +K ++E +N+L
Sbjct: 482 VTFGRLRQLLIKEEREDVLKFLNEKMNVL 510
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 1/303 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF+ D TY T++ L + Q A +LL + G +P V YN +I S + ++ A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++++M G P+ VTY LI G L A+ + M + PD TY+++++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
LGK G + A + M+ QG P++VTY+ +MD + A ++ M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+Y+I++ L ++EA + EM + IP++ Y L+D K G V AW+
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M G ++ T NS L + + + + L++ ++ G++P + TY +LL C G
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Query: 453 RIK 455
R K
Sbjct: 658 RSK 660
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 142/285 (49%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ ++ +L + K + L +M G PN VT N LI+ + A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G PD +T+ TLI G L A+ + + A G D TY+ +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
AA +L + +G P +V YN ++D K + +A LY +M G P+ VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G L++A + EM KN PD Y +LVD GK G V +A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
P+V T +SL+ + VN++ +A ++ M G+ P++Q+Y +++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 3/335 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G ++D ++ + G L+R G K Y T++ +L + K
Sbjct: 326 GLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L EM+ G PN VTY+ LI+ + L +A+ + ++M PD VTY L+D
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G + A +M M G+ PD TYS +++ + A +F M +G TPN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ +YNIM+ K + AL L +M P+KVTYS +++ L G + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM + D Y +D K +V+K + ++ G++P++ T N LL +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+I +A E+ Q++ G + TY T++ C +G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 148/312 (47%), Gaps = 18/312 (5%)
Query: 115 LKR--GYHPDTITFNTLIKGLCLHGKLHRALQFH------DDVLAQGFQLDQVTYATLIN 166
LKR G+ D T+ T++ G L RA QF D+++ G Q + VTY LI+
Sbjct: 354 LKRQPGFKHDGHTYTTMV------GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
+ A+ + +++ G KP V Y T+ID K + A D+Y M A G+SP
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ TYS +I G L A L EMV + P++VTYNI++D K + A +
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 287 AVMIKQGVKPDVVTYSSLMD--GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
M G +PD VTYS +M+ G+C + +A VF M ++ P+ Y +++
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
K V++A + M + + PN T +SL+ + K++ A+ELL M G +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 405 TYNSFLDALCKG 416
TY L G
Sbjct: 646 TYTLLLSCCTDG 657
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 1/274 (0%)
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+L +++ G P+T+T+N LI L+ A+ + + G + D+VTY TLI+
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K G + A+++ +R++ G+ P Y+ II+ L K + A L+ EM+ +G +PN+V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ ++ + A+ L +M +PD VTY+I+++ LG G + EA+ + M
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
++ PD Y L+D + V KA + AM G+ PNV + N ++ ++ +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
EA LL+ M + P+ TY+ L+ C G+
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 140/275 (50%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
D TY +V LG+ + +L M++ G +P+ VTY+ L+ Y N +N+A +VF
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
N M G P+ +Y +I K +D A+++ + M + P+ TYS +I+ L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G + A +L EM +G +++TYN +D K + + L + + + G +PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
+I+++ L CG +++A+ VF ++ +K + + Y +++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
G + T +++S + +A +LL+ M+A
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%)
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ ++ Q LLDEMV P+ VTYN L+ + G+ + EA N+ M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ G KPD VTY +L+D + ++ A D++ M G++P+ +Y+++I L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
A L EM + PN VTY+ ++D K NA +L +M G D +TY+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
++ L ++++ A+ ++ K PD Y +L+D K G ++ A + +Q + G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
N T N++++ + EA L+ M
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%)
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ G K D TY++++ + + + M R G PN +YN +I+ + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA+N+ +M P++VTY +LID K G + A ++ M G D TY+ +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
+ L K H+ L +++D+G P++ TYNI++D K ++A ++++D+ G+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ TY+ ++ L G +EA + ++M+ I D + ++ + G +KA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 531 LREMIARDL 539
+ M+ L
Sbjct: 597 YQAMLHAGL 605
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 165/362 (45%), Gaps = 7/362 (1%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ M++ P + +N+++ S + + + A+++ QM+ G P+ VT LI+ H
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G A + + G PDT T++ +I L G L A + +++ QG + V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY +++ K + AL+L R ++ G +P V Y+ +++ L + A +++EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
K P+ Y L+ + G +++A M+ + P+V T N L+ + K+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF--NAMARRGVTPNVQSYN 337
EA +L M+ G++P + TY+ L+ C + +K F MA G ++
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS--CCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA---WELLDEM 394
+ G + + A N L+ M E + +++D L K+G+ A WE+ +
Sbjct: 684 MPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 743
Query: 395 HV 396
+V
Sbjct: 744 NV 745
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ ++ FN+M + P + + ++ K A+ + ++M+ G++P+ T ++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGK---LHRALQFHDDVL 150
+INC G +A + ++ +G P+ +T+N ++ LH K AL+ + D+
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQ 531
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
GF+ D+VTY+ ++ L G E A + ++ + P +Y ++D K V
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A+ Y M+ G+ PNV T ++L+ F V ++ +A LL M+ + P + TY +L+
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 271 D 271
Sbjct: 652 S 652
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 41/316 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + + RM ++P ++ ++ L K H A L +M G TPN VT NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+++ H +A + ++ G+ PD +T++ +++ L G L A ++ +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D+ Y L++ K G E A + + + G++P V N+++ + +V ++ A+
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 214 DLYSEMIAKGISPNVVTYSALIY-----------GFCIVGQLKQAIG------------- 249
+L M+A G+ P++ TY+ L+ GFC GQL + G
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC--GQLMASTGHPAHMFLLKMPAA 687
Query: 250 -------------LLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
LD M ++ + + +VD L K G+ EA ++ V ++ V P
Sbjct: 688 GPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFP 747
Query: 297 DVVTYSSLMDGYCLVN 312
D + S Y L+N
Sbjct: 748 DALREKSC--SYWLIN 761
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 1/303 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF+ D TY T++ L + Q A +LL + G +P V YN +I S + ++ A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++++M G P+ VTY LI G L A+ + M + PD TY+++++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
LGK G + A + M+ QG P++VTY+ +MD + A ++ M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+Y+I++ L ++EA + EM + IP++ Y L+D K G V AW+
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M G ++ T NS L + + + + L++ ++ G++P + TY +LL C G
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Query: 453 RIK 455
R K
Sbjct: 658 RSK 660
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 142/285 (49%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ ++ +L + K + L +M G PN VT N LI+ + A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G PD +T+ TLI G L A+ + + A G D TY+ +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
AA +L + +G P +V YN ++D K + +A LY +M G P+ VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G L++A + EM KN PD Y +LVD GK G V +A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
P+V T +SL+ + VN++ +A ++ M G+ P++Q+Y +++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 3/335 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G ++D ++ + G L+R G K Y T++ +L + K
Sbjct: 326 GLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L EM+ G PN VTY+ LI+ + L +A+ + ++M PD VTY L+D
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G + A +M M G+ PD TYS +++ + A +F M +G TPN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ +YNIM+ K + AL L +M P+KVTYS +++ L G + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM + D Y +D K +V+K + ++ G++P++ T N LL +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+I +A E+ Q++ G + TY T++ C +G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 148/312 (47%), Gaps = 18/312 (5%)
Query: 115 LKR--GYHPDTITFNTLIKGLCLHGKLHRALQFH------DDVLAQGFQLDQVTYATLIN 166
LKR G+ D T+ T++ G L RA QF D+++ G Q + VTY LI+
Sbjct: 354 LKRQPGFKHDGHTYTTMV------GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
+ A+ + +++ G KP V Y T+ID K + A D+Y M A G+SP
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ TYS +I G L A L EMV + P++VTYNI++D K + A +
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 287 AVMIKQGVKPDVVTYSSLMD--GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
M G +PD VTYS +M+ G+C + +A VF M ++ P+ Y +++
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
K V++A + M + + PN T +SL+ + K++ A+ELL M G +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 405 TYNSFLDALCKG 416
TY L G
Sbjct: 646 TYTLLLSCCTDG 657
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 1/274 (0%)
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+L +++ G P+T+T+N LI L+ A+ + + G + D+VTY TLI+
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K G + A+++ +R++ G+ P Y+ II+ L K + A L+ EM+ +G +PN+V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ ++ + A+ L +M +PD VTY+I+++ LG G + EA+ + M
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
++ PD Y L+D + V KA + AM G+ PNV + N ++ ++ +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
EA LL+ M + P+ TY+ L+ C G+
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
D TY +V LG+ + +L M++ G +P+ VTY+ L+ Y N +N+A +VF
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
N M G P+ +Y +I K +D A+++ + M + P+ TYS +I+ L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G + A +L EM +G +++TYN +D K + + L + + + G +PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
+I+++ L CG +++A+ VF ++ +K + + Y +++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
G + T +++S + +A +LL+ M+A L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%)
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ ++ Q LLDEMV P+ VTYN L+ + G+ + EA N+ M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ G KPD VTY +L+D + ++ A D++ M G++P+ +Y+++I L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
A L EM + PN VTY+ ++D K NA +L +M G D +TY+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
++ L ++++ A+ ++ K PD Y +L+D K G ++ A + +Q + G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
N T N++++ + EA L+ M
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%)
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ G K D TY++++ + + + M R G PN +YN +I+ + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA+N+ +M P++VTY +LID K G + A ++ M G D TY+ +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
+ L K H+ L +++D+G P++ TYNI++D K ++A ++++D+ G+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ TY+ ++ L G +EA + ++M+ I D + ++ + G +KA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 531 LREMIARDL 539
+ M+ L
Sbjct: 597 YQAMLHAGL 605
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 165/362 (45%), Gaps = 7/362 (1%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ M++ P + +N+++ S + + + A+++ QM+ G P+ VT LI+ H
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G A + + G PDT T++ +I L G L A + +++ QG + V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY +++ K + AL+L R ++ G +P V Y+ +++ L + A +++EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
K P+ Y L+ + G +++A M+ + P+V T N L+ + K+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF--NAMARRGVTPNVQSYN 337
EA +L M+ G++P + TY+ L+ C + +K F MA G ++
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS--CCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA---WELLDEM 394
+ G + + A N L+ M E + +++D L K+G+ A WE+ +
Sbjct: 684 MPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 743
Query: 395 HV 396
+V
Sbjct: 744 NV 745
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ ++ FN+M + P + + ++ K A+ + ++M+ G++P+ T ++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGK---LHRALQFHDDVL 150
+INC G +A + ++ +G P+ +T+N ++ LH K AL+ + D+
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQ 531
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
GF+ D+VTY+ ++ L G E A + ++ + P +Y ++D K V
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A+ Y M+ G+ PNV T ++L+ F V ++ +A LL M+ + P + TY +L+
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 271 D 271
Sbjct: 652 S 652
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 41/316 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + + RM ++P ++ ++ L K H A L +M G TPN VT NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+++ H +A + ++ G+ PD +T++ +++ L G L A ++ +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D+ Y L++ K G E A + + + G++P V N+++ + +V ++ A+
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 214 DLYSEMIAKGISPNVVTYSALIY-----------GFCIVGQLKQAIG------------- 249
+L M+A G+ P++ TY+ L+ GFC GQL + G
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC--GQLMASTGHPAHMFLLKMPAA 687
Query: 250 -------------LLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
LD M ++ + + +VD L K G+ EA ++ V ++ V P
Sbjct: 688 GPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFP 747
Query: 297 DVVTYSSLMDGYCLVN 312
D + S Y L+N
Sbjct: 748 DALREKSC--SYWLIN 761
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 1/303 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF+ D TY T++ L + Q A +LL + G +P V YN +I S + ++ A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++++M G P+ VTY LI G L A+ + M + PD TY+++++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
LGK G + A + M+ QG P++VTY+ +MD + A ++ M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+Y+I++ L ++EA + EM + IP++ Y L+D K G V AW+
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M G ++ T NS L + + + + L++ ++ G++P + TY +LL C G
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Query: 453 RIK 455
R K
Sbjct: 658 RSK 660
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 142/285 (49%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ ++ +L + K + L +M G PN VT N LI+ + A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G PD +T+ TLI G L A+ + + A G D TY+ +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
AA +L + +G P +V YN ++D K + +A LY +M G P+ VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G L++A + EM KN PD Y +LVD GK G V +A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
P+V T +SL+ + VN++ +A ++ M G+ P++Q+Y +++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 3/335 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G ++D ++ + G L+R G K Y T++ +L + K
Sbjct: 326 GLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGAI 383
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L EM+ G PN VTY+ LI+ + L +A+ + ++M PD VTY L+D
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G + A +M M G+ PD TYS +++ + A +F M +G TPN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ +YNIM+ K + AL L +M P+KVTYS +++ L G + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM + D Y +D K +V+K + ++ G++P++ T N LL +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+I +A E+ Q++ G + TY T++ C +G
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 148/312 (47%), Gaps = 18/312 (5%)
Query: 115 LKR--GYHPDTITFNTLIKGLCLHGKLHRALQFH------DDVLAQGFQLDQVTYATLIN 166
LKR G+ D T+ T++ G L RA QF D+++ G Q + VTY LI+
Sbjct: 354 LKRQPGFKHDGHTYTTMV------GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
+ A+ + +++ G KP V Y T+ID K + A D+Y M A G+SP
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ TYS +I G L A L EMV + P++VTYNI++D K + A +
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 287 AVMIKQGVKPDVVTYSSLMD--GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
M G +PD VTYS +M+ G+C + +A VF M ++ P+ Y +++
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
K V++A + M + + PN T +SL+ + K++ A+ELL M G +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 405 TYNSFLDALCKG 416
TY L G
Sbjct: 646 TYTLLLSCCTDG 657
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 1/274 (0%)
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+L +++ G P+T+T+N LI L+ A+ + + G + D+VTY TLI+
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K G + A+++ +R++ G+ P Y+ II+ L K + A L+ EM+ +G +PN+V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ ++ + A+ L +M +PD VTY+I+++ LG G + EA+ + M
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
++ PD Y L+D + V KA + AM G+ PNV + N ++ ++ +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
EA LL+ M + P+ TY+ L+ C G+
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
D TY +V LG+ + +L M++ G +P+ VTY+ L+ Y N +N+A +VF
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
N M G P+ +Y +I K +D A+++ + M + P+ TYS +I+ L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G + A +L EM +G +++TYN +D K + + L + + + G +PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
+I+++ L CG +++A+ VF ++ +K + + Y +++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
G + T +++S + +A +LL+ M+A L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%)
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ ++ Q LLDEMV P+ VTYN L+ + G+ + EA N+ M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ G KPD VTY +L+D + ++ A D++ M G++P+ +Y+++I L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
A L EM + PN VTY+ ++D K NA +L +M G D +TY+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
++ L ++++ A+ ++ K PD Y +L+D K G ++ A + +Q + G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
N T N++++ + EA L+ M
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%)
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ G K D TY++++ + + + M R G PN +YN +I+ + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA+N+ +M P++VTY +LID K G + A ++ M G D TY+ +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
+ L K H+ L +++D+G P++ TYNI++D K ++A ++++D+ G+
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ TY+ ++ L G +EA + ++M+ I D + ++ + G +KA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 531 LREMIARDL 539
+ M+ L
Sbjct: 597 YQAMLHAGL 605
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 165/362 (45%), Gaps = 7/362 (1%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ M++ P + +N+++ S + + + A+++ QM+ G P+ VT LI+ H
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G A + + G PDT T++ +I L G L A + +++ QG + V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY +++ K + AL+L R ++ G +P V Y+ +++ L + A +++EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
K P+ Y L+ + G +++A M+ + P+V T N L+ + K+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF--NAMARRGVTPNVQSYN 337
EA +L M+ G++P + TY+ L+ C + +K F MA G ++
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLS--CCTDGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA---WELLDEM 394
+ G + + A N L+ M E + +++D L K+G+ A WE+ +
Sbjct: 684 MPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQK 743
Query: 395 HV 396
+V
Sbjct: 744 NV 745
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+++ ++ FN+M + P + + ++ K A+ + ++M+ G++P+ T ++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGK---LHRALQFHDDVL 150
+INC G +A + ++ +G P+ +T+N ++ LH K AL+ + D+
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQ 531
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
GF+ D+VTY+ ++ L G E A + ++ + P +Y ++D K V
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A+ Y M+ G+ PNV T ++L+ F V ++ +A LL M+ + P + TY +L+
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 271 D 271
Sbjct: 652 S 652
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 41/316 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + + RM ++P ++ ++ L K H A L +M G TPN VT NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+++ H +A + ++ G+ PD +T++ +++ L G L A ++ +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D+ Y L++ K G E A + + + G++P V N+++ + +V ++ A+
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 214 DLYSEMIAKGISPNVVTYSALIY-----------GFCIVGQLKQAIG------------- 249
+L M+A G+ P++ TY+ L+ GFC GQL + G
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFC--GQLMASTGHPAHMFLLKMPAA 687
Query: 250 -------------LLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
LD M ++ + + +VD L K G+ EA ++ V ++ V P
Sbjct: 688 GPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFP 747
Query: 297 DVVTYSSLMDGYCLVN 312
D + S Y L+N
Sbjct: 748 DALREKSC--SYWLIN 761
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 176/360 (48%), Gaps = 5/360 (1%)
Query: 177 ALELLRRIEG-RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
AL + + E +G K T YN +I+SL K+K + L +M AK + T++ +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALIS 169
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
+ ++K+AIG +M + +N ++D L K V +A+ + M K+ +
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
PD+ +Y+ L++G+ + + +V M G P+V +Y I+I CK K +EA+
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
EM+ P+ + SLI+GL K+++A E + G P + TYN+ + A C
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
++ + ++ KG+ P+ TY+I+L L + R K+A EV+Q + T
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVST 406
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
Y M+ C + D A+ + +M+ G + F ++I+AL + + D+A + EM+
Sbjct: 407 YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 175/385 (45%), Gaps = 4/385 (1%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
++G+ T +N LI+ L + DD+ A+ L + T+A + + + +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVK 179
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A+ ++E G K +N ++D+L K + V A ++ +M K P++ +Y+ L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G+ L + + EM + +PDVV Y I+++A K K EA M ++ K
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
P + SL++G ++N A + F G +YN ++ C + +++A
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKT 359
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
++EM + + PN TY ++ L + + A+E+ M +P + TY + C
Sbjct: 360 VDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSC--EPT-VSTYEIMVRMFCN 416
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+D I + ++ KG+ P M ++ L+ LC ++ +A E F ++ G
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHM 476
Query: 476 YNTMINGLCKEGLFDEALTLMSKME 500
++ + L EG D+ L+ KM+
Sbjct: 477 FSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 3/331 (0%)
Query: 64 VKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDT 123
+ + AI +ME G N +++ A V + K+ + PD
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 124 ITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR 183
++ L++G L R + + ++ +GF+ D V Y +IN CK + E A+
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
+E R KP+ ++ ++I+ L K ++ A + + + G TY+AL+ +C +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
++ A +DEM LK + P+ TY+I++ L + + +EA + M +P V TY
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEI 409
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
++ +C ++ A +++ M +GV P + ++ +I LC +DEA EM
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
I P +S L L G+ +L+ +M
Sbjct: 470 IRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV D F++M + R P I + +L + + ++R+M+ G P+ V
Sbjct: 212 NVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYG 271
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+IN HC + A + +R P F +LI GL KL+ AL+F + +
Sbjct: 272 IIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSS 331
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF L+ TY L+ C + E A + + + +G+ P Y+ I+ L +++ A
Sbjct: 332 GFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++Y M P V TY ++ FC +L AI + DEM K + P + ++ L+ A
Sbjct: 392 YEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
L E K+ EA M+ G++P +S L
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 162/345 (46%), Gaps = 1/345 (0%)
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y P ++ + L K L H K + + + T +I K G + A+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 179 ELLRRIEGR-GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
EL + G + TV +YN+++ +LC VK+ A+ L MI KG+ P+ TY+ L+ G
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
+C G++K+A LDEM + +P ++L++ L G + AK M++ M K G PD
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
+ T++ L++ EV +++ + G+ ++ +Y +I + KI +DEA LL
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
+ P Y+ +I G+C+ G +A+ +M V+ P + Y + +G
Sbjct: 347 NCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGG 406
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
+ ++ + G+ P ++++ DGL G+ A + Q
Sbjct: 407 KFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 161/342 (47%), Gaps = 3/342 (0%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
PT + Y + SL K + + +M + + T +I + G + QA+ L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 251 LDEMVLKNI--DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
+ V K + V YN L+ AL A ++ MI++G+KPD TY+ L++G+
Sbjct: 169 FNG-VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 309 CLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK 368
C ++ +A++ + M+RRG P + +++I GL ++ A ++ +M +P+
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 369 VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKK 428
T++ LI+ + K+G+V E+ G DI TY + + A+ K +D+ L+
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
++ G +P Y ++ G+C+ G DA F D+ K + N Y +I + G
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK 407
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
F +A + +M + G + F+ + L G++D A ++
Sbjct: 408 FVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 3/367 (0%)
Query: 35 DDTVSFFNRMLQ-MRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D++ FFN TP +E+ ++ SL K Y + + +QM+ + + TL
Sbjct: 92 NDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCF 151
Query: 94 LINCHCYLGQTTSAFSVLANILKR-GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I + G A + + K G +N+L+ LC H A ++ +
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D+ TYA L+NG C G+ + A E L + RG P + +I+ L + A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ S+M G P++ T++ LI G+++ I + + D+ TY L+ A
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ K GK+ EA +L ++ G KP Y+ ++ G C + A F+ M + PN
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN 391
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
Y ++I + +A N L EM ++P + + DGL GK A +
Sbjct: 392 RPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Query: 393 -EMHVRG 398
E+ +RG
Sbjct: 452 LEVQLRG 458
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 1/275 (0%)
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
P + Y L +L K +L M + T +++ Y V++A ++
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 321 FNAMARR-GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
FN + + G V YN +++ LC +KM A L+ M + + P+K TY+ L++G C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
GK+ A E LDEM RG + ++ L +++ ++ K+ G PD+
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
T+NIL++ + K G ++ E++ K G ++ TY T+I + K G DEA L++
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
++G P + II + G D A +M
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 1/276 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIE-FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTL 91
+VD V FN + + ++ +N +L +L K + A +L R+M G+ P+ T
Sbjct: 161 HVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTY 220
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
IL+N C G+ A L + +RG++P + LI+GL G L A + +
Sbjct: 221 AILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTK 280
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
GF D T+ LI + K G+ E +E+ G+ + Y T+I ++ K+ +
Sbjct: 281 GGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDE 340
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
AF L + + G P Y+ +I G C G A +M +K P+ Y +L+
Sbjct: 341 AFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT 400
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
G+ GK +A N L M + G+ P + + DG
Sbjct: 401 MCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 235/531 (44%), Gaps = 37/531 (6%)
Query: 33 NVDDTVSFFNRMLQMR------ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITP 86
++D +S F M + P I +N ++ L A+ + +++++G P
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
+ T ILI C + A + + G+ PDTI +N L+ G K+ A Q
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
+ ++ +G + TY LI+GL + G+ EA L ++ +G + ++ + LC+
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCRE 442
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
+ A L EM +G S ++VT S+L+ GF G+ L+ + N+ P+V+ +
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Query: 267 NILVDALGKEGKVREAK---------NMLAVMIKQG----------VKP---DVVTYSSL 304
N V+A K + ++ + L +M G V P D + S
Sbjct: 503 NAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPY 562
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI-MIYGLCKIKM----VDEALNLLEEM 359
MD L ++ N+ + +F + V S+++ M+ I + + A L E
Sbjct: 563 MDQ--LAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIF 620
Query: 360 DYEKIIP-NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
+ + TY+S++ K G A +LD+M ADI TYN + L K
Sbjct: 621 NGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGR 680
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
D A++ ++ +G D+ YN L++ L K R+ +A ++F + G N + +YNT
Sbjct: 681 ADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNT 740
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
MI K G EA + M D GC+ + +T +TI+ L ++ E + +K
Sbjct: 741 MIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGKEMEKARFKK 790
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 204/436 (46%), Gaps = 30/436 (6%)
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
L+ GY ++ + + +C G L + G LDQ L++ L + G+
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 175 EAALELLRRIE--GRGIKPTVVMYNTIIDSLCK-----------VKLV----SHAFDLYS 217
E+AL +L +E G + P+V Y++++ +L K KL+ +H+ D
Sbjct: 144 ESALGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 218 EMIAKGISPNVVTYSALIYGFC---IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
+I P V + L+ G + + K+ L M K D +YNI + G
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM--KRFKFDTWSYNICIHGFG 259
Query: 275 KEGKVREAKNMLAVMIKQG------VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
G + A ++ M ++ PD+ TY+SL+ CL + A V++ + G
Sbjct: 260 CWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSG 319
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
P+ +Y I+I G CK +D+A+ + EM Y +P+ + Y+ L+DG K KV+ A
Sbjct: 320 HEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
+L ++M G A TYN +D L + + G L + KG D T++I+ L
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
C+ G+++ A ++ +++ +G++++ T ++++ G K+G +D LM + + + +
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV 499
Query: 509 ITFETIISALFEKGEN 524
+ + + A ++ ++
Sbjct: 500 LRWNAGVEASLKRPQS 515
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 26/374 (6%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
G K + Y+ I ++C+ L+ DL M G++ + L+ G+ + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 248 IGLLD--EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK---------- 295
+G+LD E + ++P V Y+ ++ AL K+ ++R A ++L +++
Sbjct: 147 LGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204
Query: 296 -----PDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARRGVTPNVQSYNIMIYGLCKIKMV 349
P V + L+ G + ++ + VF + + + SYNI I+G +
Sbjct: 205 IVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDL 264
Query: 350 DEALNLLEEMDYEKII------PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
D AL+L +EM + P+ TY+SLI LC GK +A + DE+ V G D
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
TY + CK + +D + + ++ G PD YN LLDG K ++ +A ++F+
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ ++G + WTYN +I+GL + G + TL ++ G D ITF + L +G+
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 524 NDKAEKLLREMIAR 537
+ A KL+ EM R
Sbjct: 445 LEGAVKLVEEMETR 458
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 181/416 (43%), Gaps = 49/416 (11%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRG 118
+L SL+++ + +A+ + ME G N + ++ + A S+L +L+
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEAS 192
Query: 119 ---------------YHPDTITFNTLIKGLC---LHGKLHRALQFHDDVLAQGFQLDQVT 160
Y P T+ N L+ GL + + R + + + F+ D +
Sbjct: 193 DNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM--KRFKFDTWS 250
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y I+G G +AAL L + ++ R S +
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKER-----------------------------SSVY 281
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
P++ TY++LI+ C+ G+ K A+ + DE+ + +PD TY IL+ K ++
Sbjct: 282 GSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMD 341
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+A + M G PD + Y+ L+DG +V +A +F M + GV + +YNI+I
Sbjct: 342 DAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
GL + + L ++ + + +T+S + LC+ GK+ A +L++EM RG
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
D++T +S L K D L+K I + + P++ +N ++ K + KD
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD 517
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 178/371 (47%), Gaps = 3/371 (0%)
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
QGF D TY ++++ L K Q E + +L + +G+ T+ + + + K
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A ++ M V T + L+ K+A L D++ + P+++TY +L++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 306
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ + EA + MI QG+KPD+V ++ +++G + + A +F+ M +G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV+SY IMI CK ++ A+ ++M + P+ Y+ LI G K+ +ELL
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
EM +G P D TYN+ + + + + K+I I+P + T+N+++
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
+ + V++++ KKG ++ +Y +I GL EG EA + +M D G + P+
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG-MKTPLID 545
Query: 512 ETIISALFEKG 522
+A F +G
Sbjct: 546 YNKFAADFHRG 556
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 5/306 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC--HCYLGQTTSAFSVLAN 113
F + + K A+ + M+ T+N L++ LG+ VL +
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---VLFD 288
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
LK + P+ +T+ L+ G C L A + +D++ QG + D V + ++ GL + +
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
A++L ++ +G P V Y +I CK + A + + +M+ G+ P+ Y+
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI GF +L LL EM K PD TYN L+ + + A + MI+
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE 468
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
++P + T++ +M Y + R V+ M ++G+ P+ SY ++I GL EA
Sbjct: 469 IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREAC 528
Query: 354 NLLEEM 359
LEEM
Sbjct: 529 RYLEEM 534
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 135/284 (47%), Gaps = 4/284 (1%)
Query: 45 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQT 104
L+ R TP ++ + +L + ++ A + M G+ P+ V N+++ +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
+ A + + +G P+ ++ +I+ C + A+++ DD++ G Q D Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
I G + + ELL+ ++ +G P YN +I + K+ HA +Y++MI I
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
P++ T++ ++ + + + + +EM+ K I PD +Y +L+ L EGK REA
Sbjct: 470 EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACR 529
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
L M+ +G+K ++ Y+ + + ++F +A+R
Sbjct: 530 YLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRA 569
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ + +N M+ + P I+ N +L L++++ S AI L M+ G PN +
Sbjct: 313 NLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+I C +A +++ G PD + LI G KL + ++ +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D TY LI + E A + ++ I+P++ +N I+ S +
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMG 492
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ EMI KGI P+ +Y+ LI G G+ ++A L+EM+ K + ++ YN
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 273 LGKEGK 278
+ G+
Sbjct: 553 FHRGGQ 558
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 35/246 (14%)
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV------------- 369
A R+G + ++YN M+ L K + + +++LEEM + ++ +
Sbjct: 185 AAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKE 244
Query: 370 ---------------------TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
T + L+D L + A L D++ R P +++TY
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP-NMMTYTV 303
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
L+ C+ ++ + + +ID+G++PD+ +N++L+GL + + DA ++F + KG
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
N +Y MI CK+ + A+ M D+G D + +I+ + + D
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 529 KLLREM 534
+LL+EM
Sbjct: 424 ELLKEM 429
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 176/387 (45%), Gaps = 1/387 (0%)
Query: 145 FHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
F V G D +Y+ ++ L + +++L+ + G+ P + +DS
Sbjct: 138 FDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFV 197
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+V V A +L+ E + G+ + +++AL+ C + A + + NI D
Sbjct: 198 RVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSC 256
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+YNI++ K G+V E + +L M++ G PD ++YS L++G +N + ++F+ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
+G P+ YN MI + DE++ M E+ PN TYS L+ GL K KV
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
S+A E+ +EM RG SFL LC + + +K G + Y +L
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLL 436
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
L L + G+ V+ ++ + GY + Y +++GLC G + A+ +M + G
Sbjct: 437 LKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Query: 505 IHDPITFETIISALFEKGENDKAEKLL 531
+ + + S L + + A KL
Sbjct: 497 CPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 177/384 (46%), Gaps = 46/384 (11%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL----AQGFQLDQVTYATLINGLCKMGQ 173
G D +++ +++ L G+ + F DVL +G D ++ ++
Sbjct: 146 GVTKDVGSYSVILRAL---GR-RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP-NVVTYS 232
A+EL E G+K + +N ++ LC+ VS A +++ KG P + +Y+
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYN 259
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+I G+ +G++++ +L EMV PD ++Y+ L++ LG+ G++ ++ + + +
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
G PD Y++++ + + +++ + M PN+++Y+ ++ GL K + V +A
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTG-----------------KVS-NAWELL--- 391
L + EEM ++P +S + LC G ++S +A++LL
Sbjct: 380 LEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKR 439
Query: 392 --------------DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
DEM G P+D+ Y +D LC H++ + ++++ + KG P+
Sbjct: 440 LSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Query: 438 MCTYNILLDGLCKCGRIKDAQEVF 461
Y+ L L + + A ++F
Sbjct: 500 RFVYSRLSSKLMASNKTELAYKLF 523
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 174/394 (44%), Gaps = 4/394 (1%)
Query: 38 VSFFNRML-QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
V+FF+ + + +T + ++ +L +L + K +S + + + M G+ P+ L I ++
Sbjct: 135 VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMD 194
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
+ A + G T +FN L++ LC + A +
Sbjct: 195 SFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPF 253
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D +Y +I+G K+G+ E ++L+ + G P + Y+ +I+ L + ++ + +++
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+ KG P+ Y+A+I F +++ M+ + +P++ TY+ LV L K
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
KV +A + M+ +GV P +S + C + A ++ + G + +Y
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAY 433
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV-TYSSLIDGLCKTGKVSNAWELLDEMH 395
+++ L + LN+ +EM E P+ V Y ++DGLC G + NA +++E
Sbjct: 434 KLLLKRLSRFGKCGMLLNVWDEMQ-ESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAM 492
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKI 429
+G + Y+ L + + L KI
Sbjct: 493 RKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKI 526
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 3/249 (1%)
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
GV DV +YS ++ + DV M GV P+++ I + ++ V A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLD 411
+ L EE + + + ++++L+ LC+ VS A + + +G P D +YN +
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFDSCSYNIMIS 263
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
K V++ ++K++++ G PD +Y+ L++GL + GRI D+ E+F ++ KG
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
+ YN MI FDE++ +M D C + T+ ++S L + + A ++
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 532 REMIARDLL 540
EM++R +L
Sbjct: 384 EEMLSRGVL 392
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 36/316 (11%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
FN +L L + H S A S+ + I + + NI+I+ LG+ VL ++
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG---------------------- 153
+ G+ PD ++++ LI+GL G+++ +++ D++ +G
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 154 -------FQLDQV------TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTII 200
LD+ TY+ L++GL K + ALE+ + RG+ PT + + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 201 DSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID 260
LC A +Y + G + Y L+ G+ + + DEM
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
DV Y +VD L G + A ++ +++G P+ YS L N+ A +
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Query: 321 FNAMARRGVTPNVQSY 336
F + + T N +S+
Sbjct: 523 FLKIKKARATENARSF 538
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D+V F+ + P +N ++ + + + + ++ R+M PN T +
Sbjct: 306 INDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSK 365
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ + + A + +L RG P T + +K LC +G H A+ + G
Sbjct: 366 LVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG 425
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
++ + Y L+ L + G+ L + ++ G V +Y I+D LC + + +A
Sbjct: 426 CRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAV 485
Query: 214 DLYSEMIAKGISPNVVTYSAL 234
+ E + KG PN YS L
Sbjct: 486 LVMEEAMRKGFCPNRFVYSRL 506
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 80/184 (43%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ D+++ ++ RML P + ++K+++ L+K + S A+ + +M G+ P +
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+ C G +A + K G + L+K L GK L D++
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G+ D Y +++GLC +G E A+ ++ +G P +Y+ + L A
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Query: 213 FDLY 216
+ L+
Sbjct: 520 YKLF 523
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 141/596 (23%), Positives = 249/596 (41%), Gaps = 114/596 (19%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
+I +N +L L K + SL +M GI P T LI+ + G A L
Sbjct: 187 VIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLG 246
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH-----DDVLAQGFQ-LDQVTYATLIN 166
+ K G PD +T +++ + +A +F D+ A L TY T+I+
Sbjct: 247 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 306
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIID------------SLCK-VKL----- 208
K GQ + A E +R+ GI PT V +NT+I SL K +KL
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD 366
Query: 209 ----------------VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
+ A + EM G+ P+ V+Y L+Y F I +++A GL+
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 253 EMVLKNIDPDVVT----------------------------------YNILVDALGKEGK 278
EM N++ D T Y+ +DA G+ G
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGY 486
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+ EA+ + + ++ K V+ Y+ ++ Y + KA ++F +M GVTP+ +YN
Sbjct: 487 LSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 339 MIY----------GLCKIKMVDEA---------------------LNLLEEMDYE----K 363
++ G C ++ + E LN+ EE+ E
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I P+ V Y LI+ TG V A ++ M G P + + YNS + K ++D+
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 424 ALIKKII---DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
A+ +K++ +K PD+ T N +++ + ++ A+ +F + ++G N +T+ M+
Sbjct: 666 AIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMML 724
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
K G F+EA + +M + + DP+++ +++ G +A + +EM++
Sbjct: 725 CMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS 780
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 223/511 (43%), Gaps = 9/511 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ + F RML+ I P + FN ++ SL + M++ P+ T N
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYN 371
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI+ H A + + G PD +++ TL+ + + A ++
Sbjct: 372 ILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD 431
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
++D+ T + L + E + +R G + Y+ ID+ + +S A
Sbjct: 432 NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEA 490
Query: 213 FDLYSEMIAKGISPN-VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
++ + + ++ V+ Y+ +I + I ++A L + M+ + PD TYN LV
Sbjct: 491 ERVF--ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
L + + L M + G D + Y +++ + + ++N A +V+ M + P
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEP 608
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA---W 388
+V Y ++I V +A++ +E M I N V Y+SLI K G + A +
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
L + + Q D+ T N ++ + V K A+ + +G + + T+ ++L
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMY 727
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
K GR ++A ++ + + + + +YN+++ +G F EA+ +M +G D
Sbjct: 728 KKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDD 787
Query: 509 ITFETIISALFEKGENDKAEKLLREMIARDL 539
TF+++ + L + G + KA + + E+ +++
Sbjct: 788 STFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 195/429 (45%), Gaps = 13/429 (3%)
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y + I +N +++ L K D+++ +G + TY TLI+ K G AL
Sbjct: 183 YELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHAL 242
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA------KGISPNVVTYS 232
L ++ G++P V ++ K + A + + + + + TY+
Sbjct: 243 CWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYN 302
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+I + GQ+K+A M+ + I P VT+N ++ G G++ E +++ M K
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KL 361
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
PD TY+ L+ + N++ +A F M G+ P+ SY ++Y MV+EA
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
L+ EMD + + ++ T S+L + + +W HV G + Y++ +DA
Sbjct: 422 EGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS-EGYSANIDA 480
Query: 413 LCKGHHVDKG--IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
+ ++ + + + + ++K + YN+++ + A E+F+ + G
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRT---VIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ TYNT++ L + + + KM + G + D I + +IS+ + G+ + AE++
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 531 LREMIARDL 539
+EM+ ++
Sbjct: 598 YKEMVEYNI 606
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 154/339 (45%), Gaps = 8/339 (2%)
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
YL + F + KR I +N +IK + +A + + +++ G D+
Sbjct: 486 YLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC 541
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY TL+ L L ++ G + Y +I S K+ ++ A ++Y EM
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ I P+VV Y LI F G ++QA+ ++ M I + V YN L+ K G +
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYL 661
Query: 280 REAKNMLAVMIKQGVK---PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
EA+ + +++ K PDV T + +++ Y + V KA +F++M +RG N ++
Sbjct: 662 DEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTF 720
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
+M+ K +EA + ++M KI+ + ++Y+S++ G+ A E EM
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS 780
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
G D T+ S L K K + I++I K I+
Sbjct: 781 SGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 176/379 (46%), Gaps = 8/379 (2%)
Query: 87 NFVTLN--ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ 144
NF ++ +LI + LG A VL+ + K G P+ I++ L++ GK + A
Sbjct: 136 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA 195
Query: 145 FHDDVLAQGFQLDQVTYATLINGLC---KMGQTEAALELLRRIEGRGIKPTVVMYNTIID 201
+ + G + +TY ++ K + E E L + +KP MY+ +I
Sbjct: 196 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 255
Query: 202 SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP 261
K A ++S M+ KG+ + VTY++L+ K+ + D+M +I P
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQP 312
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
DVV+Y +L+ A G+ + EA ++ M+ GV+P Y+ L+D + + V +A+ VF
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
+M R + P++ SY M+ ++ A + + + PN VTY +LI G K
Sbjct: 373 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 432
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
V E+ ++M + G A+ + +DA + + + K++ G+ PD
Sbjct: 433 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAK 492
Query: 442 NILLDGLCKCGRIKDAQEV 460
N+LL +++A+E+
Sbjct: 493 NVLLSLASTQDELEEAKEL 511
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 10/362 (2%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
I+F ++T+ K +++ A + + G TPN ++ L+ + G+ +A ++
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG---FQLDQVTYATLINGLCK 170
+ G P IT+ ++K K A + + +L + + DQ Y +I K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G E A ++ + G+G+ + V YN+++ K VS +Y +M I P+VV+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVS 316
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+ LI + + ++A+ + +EM+ + P YNIL+DA G V +AK + M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ + PD+ +Y++++ Y +++ A F + G PN+ +Y +I G K V+
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 436
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLID--GLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
+ + + E+M I N+ ++++D G CK + W EM G P D N
Sbjct: 437 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW--YKEMESCGVPPDQKAKNV 494
Query: 409 FL 410
L
Sbjct: 495 LL 496
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 175/382 (45%), Gaps = 10/382 (2%)
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ ++ + LI K+G A +L + G P V+ Y +++S + ++A
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN---IDPDVVTYNILV 270
++ M + G P+ +TY ++ F + K+A + + ++ + + PD Y++++
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
K G +A+ + + M+ +GV VTY+SLM EV+K +++ M R +
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQ 311
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
P+V SY ++I + + +EAL++ EEM + P Y+ L+D +G V A +
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
M D+ +Y + L A ++ K+I G +P++ TY L+ G K
Sbjct: 372 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN--GLCKEGLFDEALTLMSKMEDNGCIHDP 508
++ EV++ + G N T+++ G CK F AL +ME G D
Sbjct: 432 ANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQ 489
Query: 509 ITFETIISALFEKGENDKAEKL 530
++S + E ++A++L
Sbjct: 490 KAKNVLLSLASTQDELEEAKEL 511
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI + +G A +L + P+V++Y L+++ G+ GK A+ + M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAM---ARRGVTPNVQSYNIMIYGLCKIKMVD 350
+P +TY ++ + ++ +A +VF + + + P+ + Y++MIY K +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
+A + M + + + VTY+SL+ +VS ++ D+M D+++Y +
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLI 321
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
A + ++ +++ ++++D G++P YNILLD G ++ A+ VF+ + +
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ W+Y TM++ + A +++ +G + +T+ T+I + + +K ++
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 531 LREM 534
+M
Sbjct: 442 YEKM 445
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 3/256 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N + F+ M+ + + +N +++ K S + QM+ + I P+ V+
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYA 318
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI + + A SV +L G P +N L+ + G + +A +
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D +Y T+++ E A + +RI+ G +P +V Y T+I K V
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++Y +M GI N + ++ A+G EM + PD N+L+
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 498
Query: 273 LGKEGKVREAKNMLAV 288
+ ++ EAK + +
Sbjct: 499 ASTQDELEEAKELTGI 514
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 6/203 (2%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ +S F ML + P +N +L + + A ++ + M I P+ + +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ + A I G+ P+ +T+ TLIKG + + ++ ++ + G
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ +Q T+++ + +AL + +E G+ P N ++ L S +
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS------LASTQDE 504
Query: 215 LYSEMIAKGISPNVVTYSALIYG 237
L GI T A +YG
Sbjct: 505 LEEAKELTGIRNETATIIARVYG 527
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 156/321 (48%), Gaps = 4/321 (1%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
+++ L+K G+ + D+++ GF T+ LI + G + A+ +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
+ +P YN I++SL VK +Y +M+ G SP+V+TY+ L++ +G++
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
+ L DEM PD TYNIL+ LGK K A L M + G+ P V+ Y++L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+DG + + + M + G P+V Y +MI G +D+A + EM +
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
+PN TY+S+I GLC G+ A LL EM RG + + Y++ + L K + +
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 425 LIKKIIDKG----IQPDMCTY 441
+I++++ KG + P M Y
Sbjct: 451 VIREMVKKGHYVHLVPKMMKY 471
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 180/361 (49%), Gaps = 3/361 (0%)
Query: 179 ELLRRIEGRGIKPTVV--MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
EL R+ G ++ +V + N D+ + +++ F L+S + V +Y L+
Sbjct: 99 ELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGE-QECFRHTVNSYHLLMK 157
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
F G+ K L+DEMV T+N+L+ + G+ G ++A +P
Sbjct: 158 IFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRP 217
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+Y+++++ V + V+ M G +P+V +YNI+++ ++ +D L
Sbjct: 218 FKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLF 277
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+EM + P+ TY+ L+ L K K A L+ M G ++ Y + +D L +
Sbjct: 278 DEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRA 337
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+++ + +++ G +PD+ Y +++ G G + A+E+F+++ KG N +TY
Sbjct: 338 GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
N+MI GLC G F EA L+ +ME GC + + + T++S L + G+ +A K++REM+
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Query: 537 R 537
+
Sbjct: 458 K 458
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 124/243 (51%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P +N +L SL+ K Y + +QM G +P+ +T NIL+ + LG+ +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ + G+ PD+ T+N L+ L K AL + + G + Y TLI+GL +
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G EA L + G +P VV Y +I + A +++ EM KG PNV T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+++I G C+ G+ ++A LL EM + +P+ V Y+ LV L K GK+ EA+ ++ M+
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Query: 291 KQG 293
K+G
Sbjct: 457 KKG 459
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 146/310 (47%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+Y L+ + G+ +A L+ + G T +N +I S + L A + +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
P +Y+A++ V Q K + +M+ PDV+TYNIL+ + GK+
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ M + G PD TY+ L+ N+ A N M G+ P+V Y +
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I GL + ++ L+EM P+ V Y+ +I G +G++ A E+ EM V+GQ
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
++ TYNS + LC + L+K++ +G P+ Y+ L+ L K G++ +A++
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 460 VFQDLFKKGY 469
V +++ KKG+
Sbjct: 451 VIREMVKKGH 460
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 154/319 (48%)
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
E + TV Y+ ++ + + L EM+ G T++ LI G
Sbjct: 141 EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLA 200
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
KQA+ + N P +YN ++++L + + + + M++ G PDV+TY+ L
Sbjct: 201 KQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL 260
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+ + ++++ +F+ MAR G +P+ +YNI+++ L K AL L M I
Sbjct: 261 LWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI 320
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
P+ + Y++LIDGL + G + LDEM G D++ Y + +DK
Sbjct: 321 DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKE 380
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
+ +++ KG P++ TYN ++ GLC G ++A + +++ +G N N Y+T+++ L
Sbjct: 381 MFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLR 440
Query: 485 KEGLFDEALTLMSKMEDNG 503
K G EA ++ +M G
Sbjct: 441 KAGKLSEARKVIREMVKKG 459
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 120/231 (51%), Gaps = 4/231 (1%)
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
V +L+ G+ PD +T+N L+ GK+ R + D++ GF D TY L++ L
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K + AAL L ++ GI P+V+ Y T+ID L + + EM+ G P+VV
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
Y+ +I G+ + G+L +A + EM +K P+V TYN ++ L G+ REA +L M
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG----VTPNVQSY 336
+G P+ V YS+L+ ++++AR V M ++G + P + Y
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
+ +ML+ +P ++ +N +L + + L +M G +P+ T NIL++
Sbjct: 242 YKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGK 301
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+ +A + L ++ + G P + + TLI GL G L F D+++ G + D V
Sbjct: 302 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y +I G G+ + A E+ R + +G P V YN++I LC A L EM
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK 257
++G +PN V YS L+ G+L +A ++ EMV K
Sbjct: 422 SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 4/195 (2%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+ M + +P +N +L L K A++ M+ GI P+ + LI+
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
G + L ++K G PD + + +I G + G+L +A + ++ +G + T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y ++I GLC G+ A LL+ +E RG P V+Y+T++ L K +S A + EM+
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Query: 221 AKG----ISPNVVTY 231
KG + P ++ Y
Sbjct: 457 KKGHYVHLVPKMMKY 471
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 4/272 (1%)
Query: 273 LGKEGKVREAKNMLAVMIKQG----VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
L + K R AK + G + V +Y LM + E + + M + G
Sbjct: 120 LSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDG 179
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
+++N++I + + +A+ + P K +Y+++++ L +
Sbjct: 180 FPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIE 239
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
+ +M G D++TYN L + +D+ L ++ G PD TYNILL L
Sbjct: 240 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
K + A + + G + + Y T+I+GL + G + + +M GC D
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 509 ITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ + +I+ GE DKA+++ REM + L
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ F + M++ P ++ + ++T V + A + R+M + G PN T N
Sbjct: 339 NLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 398
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I C G+ A +L + RG +P+ + ++TL+ L GKL A + +++ +
Sbjct: 399 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Query: 153 G 153
G
Sbjct: 459 G 459
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 170/343 (49%), Gaps = 3/343 (0%)
Query: 164 LINGLCKMGQT-EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
++ +C Q E A +LR ++ G+ +Y T+I S K V F+++ +M
Sbjct: 472 MLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNS 531
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G+ N+ T+ ALI G GQ+ +A G + KN+ PD V +N L+ A G+ G V A
Sbjct: 532 GVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRA 591
Query: 283 KNMLAVMIKQ--GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
++LA M + + PD ++ +LM C +V +A++V+ + + G+ + Y I +
Sbjct: 592 FDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAV 651
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
K D A ++ ++M + + P++V +S+LID + A+ +L + +G
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
I+Y+S + A C K + L +KI ++P + T N L+ LC+ ++ A E
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEY 771
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
++ G N TY+ ++ ++ F+ + L+S+ + +G
Sbjct: 772 LDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 164/370 (44%), Gaps = 10/370 (2%)
Query: 84 ITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL 143
+ P T N+L++ A VL + + G D + TLI GK+
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
+ + G + + T+ LI+G + GQ A + + +KP V++N +I +
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 204 CKVKLVSHAFDLYSEMIAK--GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP 261
+ V AFD+ +EM A+ I P+ ++ AL+ C GQ+++A + + I
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
Y I V++ K G A ++ M ++ V PD V +S+L+D +++A +
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
+G+ SY+ ++ C K +AL L E++ K+ P T ++LI LC+
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
++ A E LDE+ G + ITY+ + A + + L+ + G+ P++
Sbjct: 763 NQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI-- 820
Query: 442 NILLDGLCKC 451
+C+C
Sbjct: 821 ------MCRC 824
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 167/375 (44%), Gaps = 3/375 (0%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLG 102
R ++ + P + FN +++ ++ A + R ++ +G+T + LI+ G
Sbjct: 457 RFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSG 516
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ + F V + G + TF LI G G++ +A + + ++ + D+V +
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFN 576
Query: 163 TLINGLCKMGQTEAALELLR--RIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
LI+ + G + A ++L + E I P + ++ + C V A ++Y +
Sbjct: 577 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIH 636
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
GI Y+ + G A + +M K++ PD V ++ L+D G +
Sbjct: 637 KYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA +L QG++ ++YSSLM C + KA +++ + + P + + N +I
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
LC+ + +A+ L+E+ + PN +TYS L+ + +++LL + G
Sbjct: 757 TALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVS 816
Query: 401 ADIITYNSFLDALCK 415
++I + +LCK
Sbjct: 817 PNLIMCRC-ITSLCK 830
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 141/320 (44%), Gaps = 9/320 (2%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VD F++M + + F ++ + + A + + P+ V N
Sbjct: 518 VDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNA 577
Query: 94 LINCHCYLGQTTSAFSVLANILKRGY--HPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
LI+ G AF VLA + + PD I+ L+K C G++ RA + + +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G + Y +N K G + A + + ++ + + P V ++ +ID K++
Sbjct: 638 YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDE 697
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
AF + + ++GI ++YS+L+ C K+A+ L +++ + P + T N L+
Sbjct: 698 AFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALIT 757
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
AL + ++ +A L + G+KP+ +TYS LM ++ + + + GV+P
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSP 817
Query: 332 NVQSYNIM---IYGLCKIKM 348
N+ IM I LCK +
Sbjct: 818 NL----IMCRCITSLCKRRF 833
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 242 GQLKQAIGLLDEMVLKNI-DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
G++K I LL+++ +++ D D + + A K+ V+EA +++ P + T
Sbjct: 414 GRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILN----PTMST 469
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
++ LM ++ AR V + G+T + + Y +I K VD + +M
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS 529
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ N T+ +LIDG + G+V+ A+ + + D + +N+ + A + VD
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVD 589
Query: 421 KGIALIK--KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
+ ++ K I PD + L+ C G+++ A+EV+Q + K G Y
Sbjct: 590 RAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTI 649
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
+N K G +D A ++ M++ D + F +I
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
++P + T+N+L+ + A+ +L ++ + G+ D Y++L+ +V+
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
+VF+ M+ GV N+ ++ +I G + V +A + + + P++V +++LI
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 379 CKTGKVSNAWELLDEMHVRGQP--ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
++G V A+++L EM P D I+ + + A C V++ + + I GI+
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
Y I ++ K G A +++D+ +K + ++ +I+ + DEA ++
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 497 SKMEDNGCIHDPITFETIISA 517
+ G I++ +++ A
Sbjct: 703 QDAKSQGIRLGTISYSSLMGA 723
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 349 VDEALNLLEEMDYEKIIP-NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
+ + ++LLE++D ++ +K+ ++S K V A+ + P + T+N
Sbjct: 416 IKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLIL---NPT-MSTFN 471
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 467
+ ++ +++ + + G+ D Y L+ K G++ EVF +
Sbjct: 472 MLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNS 531
Query: 468 GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKA 527
G N T+ +I+G + G +A + D + F +ISA + G D+A
Sbjct: 532 GVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRA 591
Query: 528 EKLLREMIA 536
+L EM A
Sbjct: 592 FDVLAEMKA 600
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 176/379 (46%), Gaps = 8/379 (2%)
Query: 87 NFVTLN--ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ 144
NF ++ +LI + LG A VL+ + K G P+ I++ L++ GK + A
Sbjct: 143 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA 202
Query: 145 FHDDVLAQGFQLDQVTYATLINGLC---KMGQTEAALELLRRIEGRGIKPTVVMYNTIID 201
+ + G + +TY ++ K + E E L + +KP MY+ +I
Sbjct: 203 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 262
Query: 202 SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP 261
K A ++S M+ KG+ + VTY++L+ K+ + D+M +I P
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQP 319
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
DVV+Y +L+ A G+ + EA ++ M+ GV+P Y+ L+D + + V +A+ VF
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
+M R + P++ SY M+ ++ A + + + PN VTY +LI G K
Sbjct: 380 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 439
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
V E+ ++M + G A+ + +DA + + + K++ G+ PD
Sbjct: 440 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAK 499
Query: 442 NILLDGLCKCGRIKDAQEV 460
N+LL +++A+E+
Sbjct: 500 NVLLSLASTQDELEEAKEL 518
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 10/362 (2%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
I+F ++T+ K +++ A + + G TPN ++ L+ + G+ +A ++
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG---FQLDQVTYATLINGLCK 170
+ G P IT+ ++K K A + + +L + + DQ Y +I K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G E A ++ + G+G+ + V YN+++ K VS +Y +M I P+VV+
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVS 323
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y+ LI + + ++A+ + +EM+ + P YNIL+DA G V +AK + M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ + PD+ +Y++++ Y +++ A F + G PN+ +Y +I G K V+
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 443
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLID--GLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
+ + + E+M I N+ ++++D G CK + W EM G P D N
Sbjct: 444 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW--YKEMESCGVPPDQKAKNV 501
Query: 409 FL 410
L
Sbjct: 502 LL 503
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 175/382 (45%), Gaps = 10/382 (2%)
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ ++ + LI K+G A +L + G P V+ Y +++S + ++A
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN---IDPDVVTYNILV 270
++ M + G P+ +TY ++ F + K+A + + ++ + + PD Y++++
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
K G +A+ + + M+ +GV VTY+SLM EV+K +++ M R +
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQ 318
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
P+V SY ++I + + +EAL++ EEM + P Y+ L+D +G V A +
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
M D+ +Y + L A ++ K+I G +P++ TY L+ G K
Sbjct: 379 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN--GLCKEGLFDEALTLMSKMEDNGCIHDP 508
++ EV++ + G N T+++ G CK F AL +ME G D
Sbjct: 439 ANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQ 496
Query: 509 ITFETIISALFEKGENDKAEKL 530
++S + E ++A++L
Sbjct: 497 KAKNVLLSLASTQDELEEAKEL 518
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI + +G A +L + P+V++Y L+++ G+ GK A+ + M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAM---ARRGVTPNVQSYNIMIYGLCKIKMVD 350
+P +TY ++ + ++ +A +VF + + + P+ + Y++MIY K +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
+A + M + + + VTY+SL+ +VS ++ D+M D+++Y +
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLI 328
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
A + ++ +++ ++++D G++P YNILLD G ++ A+ VF+ + +
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ W+Y TM++ + A +++ +G + +T+ T+I + + +K ++
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 531 LREM 534
+M
Sbjct: 449 YEKM 452
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 3/256 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N + F+ M+ + + +N +++ K S + QM+ + I P+ V+
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYA 325
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI + + A SV +L G P +N L+ + G + +A +
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
D +Y T+++ E A + +RI+ G +P +V Y T+I K V
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++Y +M GI N + ++ A+G EM + PD N+L+
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 505
Query: 273 LGKEGKVREAKNMLAV 288
+ ++ EAK + +
Sbjct: 506 ASTQDELEEAKELTGI 521
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 6/203 (2%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ +S F ML + P +N +L + + A ++ + M I P+ + +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ + A I G+ P+ +T+ TLIKG + + ++ ++ + G
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ +Q T+++ + +AL + +E G+ P N ++ L S +
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS------LASTQDE 511
Query: 215 LYSEMIAKGISPNVVTYSALIYG 237
L GI T A +YG
Sbjct: 512 LEEAKELTGIRNETATIIARVYG 534
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 215/437 (49%), Gaps = 42/437 (9%)
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
++ F+++ +I P LI LC GK+ A + D + + D VT+
Sbjct: 26 RSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWT 81
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
+I G K+G A EL R++ R VV + ++ + K +S A L+ EM +
Sbjct: 82 HVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
NVV+++ +I G+ G++ +A+ L DEM +NI V++N +V AL + G++ EA
Sbjct: 139 ----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEA 190
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
N+ M ++ DVV++++++DG +V++AR +F+ M R N+ S+N MI G
Sbjct: 191 MNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITG 242
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNK--VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
+ +DEA L + ++P + +++++I G + +++ A L D M +
Sbjct: 243 YAQNNRIDEADQLFQ------VMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK--- 293
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKII-DKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
++I++ + + + ++ + + K++ D ++P++ TY +L + + Q+
Sbjct: 294 -NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG--CIHDPITFETIISA 517
+ Q + K + N + ++N K G L KM DNG C D I++ ++I+
Sbjct: 353 IHQLISKSVHQKNEIVTSALLNMYSKSG----ELIAARKMFDNGLVCQRDLISWNSMIAV 408
Query: 518 LFEKGENDKAEKLLREM 534
G +A ++ +M
Sbjct: 409 YAHHGHGKEAIEMYNQM 425
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 153/295 (51%), Gaps = 27/295 (9%)
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
Q L+ + + P V L+ L K GK+ EA+ + + ++ DVVT++ ++
Sbjct: 29 QLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVI 84
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
GY + ++ +AR++F+ + R NV ++ M+ G + K + A L +EM
Sbjct: 85 TGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER--- 138
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
N V+++++IDG ++G++ A EL DEM R +I+++NS + AL + +D+ + L
Sbjct: 139 -NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNL 193
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+++ + D+ ++ ++DGL K G++ +A+ +F + ++ N+ +W N MI G +
Sbjct: 194 FERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER--NIISW--NAMITGYAQ 245
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
DEA L M + D ++ T+I+ E +KA L M ++++
Sbjct: 246 NNRIDEADQLFQVMPE----RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/497 (20%), Positives = 212/497 (42%), Gaps = 75/497 (15%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
++ + +++ +++K S A L ++M N V+ N +I+ + G+ A +
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
+ +R + +++N+++K L G++ A+ + + + D V++ +++GL K G
Sbjct: 165 EMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNG 216
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
+ + A L + R I + +N +I + + A L+ M + + +++
Sbjct: 217 KVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWN 268
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
+I GF ++ +A GL D M KN V+++ ++ + + EA N+ + M++
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKN----VISWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 293 G-VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN--VQSYNIMIYG-----LC 344
G VKP+V TY S++ + + + + + +++ N V S + +Y +
Sbjct: 325 GSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA 384
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
KM D L ++ ++++S+I G A E+ ++M G +
Sbjct: 385 ARKMFDNGLVCQRDL---------ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 405 TYNSFLDALCKGHHVDKGIALIKKII-DKGIQPDMCTYNILLDGLCKCGRIKD------- 456
TY + L A V+KG+ K ++ D+ + Y L+D + GR+KD
Sbjct: 436 TYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINC 495
Query: 457 -------------------------AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDE 491
A+EV + + + G + + TY M N G +E
Sbjct: 496 DDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREE 554
Query: 492 ALTLMSKMEDNGCIHDP 508
A + KM++ G P
Sbjct: 555 AAEMRMKMKEKGLKKQP 571
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 182/440 (41%), Gaps = 65/440 (14%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ ++ F RM + ++ + ++ L K A L M N ++ N
Sbjct: 187 IDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNA 238
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I + + A + + +R D ++NT+I G + ++++A D + +
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG-IKPTVVMYNTIIDSLCKVKLVSHA 212
+++ T+I G + + E AL + ++ G +KP V Y +I+ + + +
Sbjct: 295 V----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 350
Query: 213 FDLYSEMIAKGI-SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
++ ++I+K + N + SAL+ + G+L A + D ++ D++++N ++
Sbjct: 351 QQIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV--CQRDLISWNSMIA 407
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
G +EA M M K G KP VTY +L+ V K + F + R
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR----- 462
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
DE+L L EE Y+ L+D + G++ + +
Sbjct: 463 ------------------DESLPLREE-----------HYTCLVDLCGRAGRLKDVTNFI 493
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP---DMCTYNILLDGL 448
+ D SF A+ +V +++ K+++ K ++ D TY ++ +
Sbjct: 494 N-------CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIY 546
Query: 449 CKCGRIKDAQEVFQDLFKKG 468
G+ ++A E+ + +KG
Sbjct: 547 AANGKREEAAEMRMKMKEKG 566
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 3/371 (0%)
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
QGF D TY ++++ L K Q E + +L + +G+ T+ + + + K
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 246
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A ++ M V T + L+ K+A L D++ + P+++TY +L++
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 305
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ + EA + MI G+KPD+V ++ +++G + + A +F+ M +G P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV+SY IMI CK ++ A+ ++M + P+ Y+ LI G K+ +ELL
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
EM +G P D TYN+ + + + G + K+I I+P + T+N+++
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
+ + V+ ++ KKG ++ +Y +I GL EG EA + +M D G + P+
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG-MKTPLID 544
Query: 512 ETIISALFEKG 522
+A F +G
Sbjct: 545 YNKFAADFHRG 555
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 5/306 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC--HCYLGQTTSAFSVLAN 113
F + + K A+ + M+ T+N L++ LG+ VL +
Sbjct: 231 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---VLFD 287
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
LK + P+ +T+ L+ G C L A + +D++ G + D V + ++ GL + +
Sbjct: 288 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
A++L ++ +G P V Y +I CK + A + + +M+ G+ P+ Y+
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI GF +L LL EM K PD TYN L+ + + + MI+
Sbjct: 408 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 467
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
++P + T++ +M Y + R V++ M ++G+ P+ SY ++I GL EA
Sbjct: 468 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREAC 527
Query: 354 NLLEEM 359
LEEM
Sbjct: 528 RYLEEM 533
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 134/284 (47%), Gaps = 4/284 (1%)
Query: 45 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQT 104
L+ R TP ++ + +L + ++ A + M G+ P+ V N+++ +
Sbjct: 289 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
+ A + + +G P+ ++ +I+ C + A+++ DD++ G Q D Y L
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
I G + + ELL+ ++ +G P YN +I + K+ H +Y++MI I
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
P++ T++ ++ + + + + DEM+ K I PD +Y +L+ L EGK REA
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 528
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
L M+ +G+K ++ Y+ + + ++F +A+R
Sbjct: 529 YLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRA 568
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ + +N M+ + P I+ N +L L+++ S AI L M+ G PN +
Sbjct: 312 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+I C +A +++ G PD + LI G KL + ++ +
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D TY LI + E + ++ I+P++ +N I+ S +
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ EMI KGI P+ +Y+ LI G G+ ++A L+EM+ K + ++ YN
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 551
Query: 273 LGKEGK 278
+ G+
Sbjct: 552 FHRGGQ 557
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 35/246 (14%)
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV------------- 369
A R+G + ++YN M+ L K + + +++LEEM + ++ +
Sbjct: 184 AAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKE 243
Query: 370 ---------------------TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
T + L+D L + A L D++ R P +++TY
Sbjct: 244 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP-NMMTYTV 302
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
L+ C+ ++ + + +ID G++PD+ +N++L+GL + + DA ++F + KG
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
N +Y MI CK+ + A+ M D+G D + +I+ + + D
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 529 KLLREM 534
+LL+EM
Sbjct: 423 ELLKEM 428
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 210/503 (41%), Gaps = 41/503 (8%)
Query: 37 TVSFFNRMLQMR-ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ FFN Q + I ++ + SL ++ +S +L +Q++ I + LI
Sbjct: 65 ALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLI 124
Query: 96 NCHCYLGQTTSAFSVLANILKRGY--HPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+ + SAF VL G HPD N L+ GL G A + + +G
Sbjct: 125 DTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKG 182
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPT-VVMYNTIIDSLCKVKLVSHA 212
L+ + + I C+ +T L L+ ++ + ++ I+ SLCK A
Sbjct: 183 VSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDA 242
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
F + E+ P+ + Y + F + G L + +L + + P Y +
Sbjct: 243 FYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILD 302
Query: 273 LGKEGKVREAKNM----------------------------------LAVMIKQGVKPDV 298
L ++ EAK + L M+ G P +
Sbjct: 303 LISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAI 362
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
T S L C ++ + + ++ +G +QSY++MI LCK V E+ L+E
Sbjct: 363 RTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQE 422
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M E + P+ Y++LI+ CK + A +L DEM V G ++ TYN + L +
Sbjct: 423 MKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGE 482
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY-NLNNWTYN 477
++ + L K++++GI+PD Y L++GLCK +I+ A EVF+ ++ + + +
Sbjct: 483 AEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLS 542
Query: 478 TMINGLCKEGLFDEALTLMSKME 500
+ LC G EA L+ + E
Sbjct: 543 EFVLNLCSNGHSGEASQLLRERE 565
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 205/461 (44%), Gaps = 45/461 (9%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
GY D+I+++++ K L L + V + LD Y +LI+ L + ++A
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSA 136
Query: 178 LELLRRI--EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
+L G+ I P V N ++ L +A L+ +M KG+S N + + I
Sbjct: 137 FWVLEEAFSTGQEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYI 194
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV-DALGKEGKVREAKNMLAVMIKQGV 294
FC + Q + L+DE+ N++ + +L+ +L K + +A +L +
Sbjct: 195 GWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDC 254
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
KPD + Y + + + + + + + V + GV P Y I L K + EA
Sbjct: 255 KPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKE 314
Query: 355 LLE-------EMDYEKI---------------------------IPNKVTYSSLIDGLCK 380
+ E MD + + +P T S L LC+
Sbjct: 315 VAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCR 374
Query: 381 TGKVSN---AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
K + A+ELL +G +++ +Y+ + LCK V + ++++ +G+ PD
Sbjct: 375 HDKSDHLIKAYELLSS---KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPD 431
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+ YN L++ CK I+ A++++ ++F +G +N TYN +I L +EG +E+L L
Sbjct: 432 VSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFD 491
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
KM + G D + ++I L ++ + + A ++ R+ + RD
Sbjct: 492 KMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 123/281 (43%), Gaps = 14/281 (4%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
D V F M+ P I +K+ +L + I + G + +++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+ C G+ +++ L + K G PD +N LI+ C + A + D++ +G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+++ TY LI L + G+ E +L L ++ RGI+P +Y ++I+ LCK + A +
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 215 LYS---EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILV 270
++ E K ++ V+ S + C G +A LL E L++ VV +
Sbjct: 524 VFRKCMERDHKTVTRRVL--SEFVLNLCSNGHSGEASQLLREREHLEHTGAHVVLLKCVA 581
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVV--TYSSLMDGYC 309
DA E +R + IK+ V P +V S L+ +C
Sbjct: 582 DAKEVEIGIRHMQ-----WIKE-VSPSLVHTISSDLLASFC 616
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
V ++ + M + + P + +N ++ + K + A L +M + G N T N
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYN 471
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+LI G+ + + +L+RG PD + +LI+GLC K+ A++ + +
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
Query: 153 GFQ-LDQVTYATLINGLCKMGQTEAALELLRRIE 185
+ + + + + LC G + A +LLR E
Sbjct: 532 DHKTVTRRVLSEFVLNLCSNGHSGEASQLLRERE 565
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 5/235 (2%)
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR-GVTPNVQSYNIMIYGLCKIKM 348
+ + P +V + ++D + L+N + A FN A++ G + + SY+ + L +
Sbjct: 41 FRHSISPSLV--ARVIDPF-LLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQ 97
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
L +++ KI+ + Y SLID L K +A+ +L+E GQ N
Sbjct: 98 FSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNR 157
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
L L D L K+ KG+ + + + + C+ + ++ K
Sbjct: 158 LLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKAN 217
Query: 469 YNLNNWTYNTMI-NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
N+N +I + LCK +A ++ ++ + C D + + I A G
Sbjct: 218 LNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTG 272
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 162/365 (44%), Gaps = 7/365 (1%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFS 109
TP + N + +L+ K A S ++ TG P L + C G A
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSF---LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 110 VLANILK-RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
V N+LK G +T N+++ G KL R + H +++ F +++ LI L
Sbjct: 167 VY-NVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIR--CLIRAL 223
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNV 228
C G ELL++ +G+ P +Y +I C++ + ++ MIA P++
Sbjct: 224 CDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSM 283
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAV 288
Y +I G C+ + +A + + K PD V Y ++ ++G + A+ +
Sbjct: 284 YIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFE 343
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
MIK+G++P+ Y+ ++ G+ E++ +N M R G + S N MI G C
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
DEA + + M + PN +TY++LI G CK KV +L E+ G + Y +
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAA 463
Query: 409 FLDAL 413
+ L
Sbjct: 464 LVRNL 468
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 155/331 (46%), Gaps = 2/331 (0%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
G KP + + L + LV A ++Y+ + GIS +VVT ++++ G +L +
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
L EMV D + + L+ AL G V E +L +KQG+ P Y+ L+ G
Sbjct: 200 WELHKEMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
+C + +V + M P++ Y +I GLC K EA + + + + P+
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPD 317
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
+V Y+++I G C+ G + +A +L EM +G + YN + K + A
Sbjct: 318 RVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYN 377
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+++ G M + N ++ G C G+ +A E+F+++ + G N TYN +I G CKE
Sbjct: 378 EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISAL 518
++ L L +++ G + + ++ L
Sbjct: 438 KVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V + + L+ + P + K+++ + +Y+ + M P+
Sbjct: 228 DVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQ 287
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I C + A+ + N+ +GY PD + + T+I+G C G L A + +++ +
Sbjct: 288 KIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + ++ Y +I+G K G+ + G T++ NT+I C A
Sbjct: 348 GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEA 407
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
F+++ M G++PN +TY+ALI GFC ++++ + L E+ + P + Y LV
Sbjct: 408 FEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRN 467
Query: 273 LGKEGKVREAKNM 285
L V + N+
Sbjct: 468 LKMSDSVATSLNL 480
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 212/495 (42%), Gaps = 84/495 (16%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P I N VL + ++ Y + L + GI PN +T N++ + + + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 111 LANILKRG-YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+ +P TF L+KGL + L +A++ +D+ +GF +D V Y+ L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK--GISPN 227
K N+ D + K LY E+ K G +
Sbjct: 248 K--------------------------NSDADGVLK---------LYQELKEKLGGFVDD 272
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKN--IDPDVVTYNILVDALGKEGKVREAKNM 285
V Y L+ G+ + K+A+ +E V +N + + YN +++AL + GK EA +
Sbjct: 273 GVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKL 332
Query: 286 LAVMIKQGVKP-----DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+ K+ P ++ T++ +++GYC + +A +VF M +P+ S+N ++
Sbjct: 333 FDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLM 392
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
LC +++ EA L EM+ + + P++ TY L+D K GK
Sbjct: 393 NQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK----------------- 435
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+D+G A K +++ ++P++ YN L D L K G++ DA+
Sbjct: 436 ------------------IDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSF 477
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
F D+ +++ Y ++ L + G DE L ++ +M D+ + + +
Sbjct: 478 F-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELR 536
Query: 521 KG--ENDKAEKLLRE 533
KG E D EKL+ E
Sbjct: 537 KGGREGD-LEKLMEE 550
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 165/359 (45%), Gaps = 12/359 (3%)
Query: 190 KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIG 249
+PT+ NT++ + + L+ + GI+PN++TY+ + + V + + A+
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALE 186
Query: 250 LLDEMVLKN--IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
++ + N ++P + T+ ILV L + +A + M +G D V YS LM G
Sbjct: 187 HY-KLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 308 YCLVNEVNKARDVFNAMARR--GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM--DYEK 363
++ + ++ + + G + Y ++ G +M EA+ EE + K
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSK 305
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA-----DIITYNSFLDALCKGHH 418
+ + + Y+ +++ L + GK A +L D + P ++ T+N ++ C G
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++ + + +++ D PD ++N L++ LC + +A++++ ++ +K + +TY
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
+++ KEG DE M ++ + + + L + G+ D A+ M+++
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 176/371 (47%), Gaps = 3/371 (0%)
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
QGF TY ++++ L K Q E + +L + +G+ T+ + + + K
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A ++ M V T + L+ K+A L D++ + P+++TY +L++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 306
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ + EA + MI G+KPD+V ++ +++G + + A +F+ M +G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 366
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV+SY IMI CK ++ A+ ++M + P+ Y+ LI G K+ +ELL
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
EM +G P D TYN+ + + + G + K+I I+P + T+N+++
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 486
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
+ + V+ ++ KKG ++ +Y +I GL EG EA + +M D G + P+
Sbjct: 487 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG-MKTPLID 545
Query: 512 ETIISALFEKG 522
+A F +G
Sbjct: 546 YNKFAADFHRG 556
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 5/306 (1%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC--HCYLGQTTSAFSVLAN 113
F + + K A+ + M+ T+N L++ LG+ VL +
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---VLFD 288
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
LK + P+ +T+ L+ G C L A + +D++ G + D V + ++ GL + +
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
A++L ++ +G P V Y +I CK + A + + +M+ G+ P+ Y+
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI GF +L LL EM K PD TYN L+ + + + MI+
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 468
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
++P + T++ +M Y + R V++ M ++G+ P+ SY ++I GL EA
Sbjct: 469 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREAC 528
Query: 354 NLLEEM 359
LEEM
Sbjct: 529 RYLEEM 534
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 134/284 (47%), Gaps = 4/284 (1%)
Query: 45 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQT 104
L+ R TP ++ + +L + ++ A + M G+ P+ V N+++ +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
+ A + + +G P+ ++ +I+ C + A+++ DD++ G Q D Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
I G + + ELL+ ++ +G P YN +I + K+ H +Y++MI I
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
P++ T++ ++ + + + + DEM+ K I PD +Y +L+ L EGK REA
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 529
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
L M+ +G+K ++ Y+ + + ++F +A+R
Sbjct: 530 YLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRA 569
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ + +N M+ + P I+ N +L L+++ S AI L M+ G PN +
Sbjct: 313 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+I C +A +++ G PD + LI G KL + ++ +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D TY LI + E + ++ I+P++ +N I+ S +
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++ EMI KGI P+ +Y+ LI G G+ ++A L+EM+ K + ++ YN
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 273 LGKEGK 278
+ G+
Sbjct: 553 FHRGGQ 558
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 35/246 (14%)
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV------------- 369
A R+G ++YN M+ L K + + +++LEEM + ++ +
Sbjct: 185 AAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKE 244
Query: 370 ---------------------TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
T + L+D L + A L D++ R P +++TY
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP-NMMTYTV 303
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
L+ C+ ++ + + +ID G++PD+ +N++L+GL + + DA ++F + KG
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
N +Y MI CK+ + A+ M D+G D + +I+ + + D
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 529 KLLREM 534
+LL+EM
Sbjct: 424 ELLKEM 429
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF+ D TY T++ L + Q +LL + G KP V YN +I S + + A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+++++M G P+ VTY LI G L A+ + M + PD TY+++++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
LGK G + A + M+ QG P++VT++ ++ + A ++ M G P+
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+Y+I++ L ++EA + EM + +P++ Y L+D K G V AW+
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
M G ++ T NS L + H + + L++ ++ G+ P + TY +LL
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ ++ +L + K + L +M G PN VT N LI+ + A +V +
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ G PD +T+ TLI G L A+ + + G D TY+ +IN L K G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
AA L + G+G P +V +N +I K + A LY +M G P+ VTYS ++
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G L++A G+ EM KN PD Y +LVD GK G V +A M++ G++
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
P+V T +SL+ + V+ +++A ++ +M G+ P++Q+Y +++
Sbjct: 602 PNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 145/277 (52%), Gaps = 2/277 (0%)
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
+L +++ G P+T+T+N LI L A+ + + G + D+VTY TLI+
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
K G + A+++ +R++ G+ P Y+ II+ L K + A L+ EM+ +G +PN+V
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
T++ +I + A+ L +M PD VTY+I+++ LG G + EA+ + A M
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
++ PD Y L+D + V+KA + AM + G+ PNV + N ++ ++ +
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
EA NLL+ M + P+ TY+ L+ C T SN
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLLS--CCTDARSN 655
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 2/329 (0%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF++D ++ + L+R G K Y T++ +L + K
Sbjct: 321 GFRMDAYQANQVLKQMDNYANALGFFYWLKRQPG--FKHDGHTYTTMVGNLGRAKQFGEI 378
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L EM+ G PN VTY+ LI+ + LK+A+ + ++M +PD VTY L+D
Sbjct: 379 NKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDI 438
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G + A +M M + G+ PD TYS +++ + A +F M +G TPN
Sbjct: 439 HAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ ++NIMI K + + AL L +M P+KVTYS +++ L G + A +
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM + D Y +D K +VDK + ++ G++P++ T N LL +
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
R+ +A + Q + G + + TY +++
Sbjct: 619 RMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 138/278 (49%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
D TY +V LG+ + E +L M++ G KP+ VTY+ L+ Y N + +A +VF
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
N M G P+ +Y +I K +D A+++ + M + P+ TYS +I+ L K
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G + A L EM +G +++T+N + K + + + L + + + G QPD TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
+I+++ L CG +++A+ VF ++ +K + + Y +++ K G D+A M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
G + T +++S +A LL+ M+A L
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 143/306 (46%), Gaps = 18/306 (5%)
Query: 115 LKR--GYHPDTITFNTLIKGLCLHGKLHRALQFH------DDVLAQGFQLDQVTYATLIN 166
LKR G+ D T+ T++ G L RA QF D+++ G + + VTY LI+
Sbjct: 349 LKRQPGFKHDGHTYTTMV------GNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIH 402
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
+ + A+ + +++ G +P V Y T+ID K + A D+Y M G+SP
Sbjct: 403 SYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSP 462
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ TYS +I G L A L EMV + P++VT+NI++ K A +
Sbjct: 463 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 522
Query: 287 AVMIKQGVKPDVVTYSSLMD--GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
M G +PD VTYS +M+ G+C E +A VF M R+ P+ Y +++
Sbjct: 523 RDMQNAGFQPDKVTYSIVMEVLGHCGFLE--EAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
K VD+A + M + PN T +SL+ + ++S A+ LL M G +
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 405 TYNSFL 410
TY L
Sbjct: 641 TYTLLL 646
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%)
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
TY+ ++ Q + LLDEMV P+ VTYN L+ + G+ ++EA N+ M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
+ G +PD VTY +L+D + ++ A D++ M G++P+ +Y+++I L K +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
A L EM + PN VT++ +I K A +L +M G D +TY+
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
++ L +++ + ++ K PD Y +L+D K G + A + +Q + + G
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
N T N++++ + EA L+ M
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 175/396 (44%), Gaps = 18/396 (4%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ M++ P + +N+++ S + + A+++ QM+ G P+ VT LI+ H
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G A + + + G PDT T++ +I L G L A + +++ QG + V
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
T+ +I K E AL+L R ++ G +P V Y+ +++ L + A +++EM
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
K P+ Y L+ + G + +A M+ + P+V T N L+ + ++
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA------MARRGVTPNV 333
EA N+L M+ G+ P + TY+ L+ C + AR F+ MA G ++
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLLS--CCTD----ARSNFDMGFCGQLMAVSGHPAHM 674
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG---KVSNAWEL 390
+ G K+ D N L+ M E + +++D L K+G + + WE+
Sbjct: 675 FLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEV 734
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
+V D + S+ L H + +G A+I
Sbjct: 735 AAGKNVY---PDALREKSYSYWLINLHVMSEGTAVI 767
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 118/238 (49%), Gaps = 6/238 (2%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ ++ FN+M + P + + ++ K A+ + ++M+ G++P+ T +++I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHR---ALQFHDDVLAQ 152
NC G +A + ++ +G P+ +TFN +I LH K AL+ + D+
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI---ALHAKARNYETALKLYRDMQNA 528
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GFQ D+VTY+ ++ L G E A + ++ + P +Y ++D K V A
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
+ Y M+ G+ PNV T ++L+ F V ++ +A LL M+ + P + TY +L+
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 119/249 (47%)
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+ G K D TY++++ + + + + M R G PN +YN +I+ + +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA+N+ +M P++VTY +LID K G + A ++ M G D TY+ +
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
+ L K H+ L +++ +G P++ T+NI++ K + A ++++D+ G+
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
+ TY+ ++ L G +EA + ++M+ + D + ++ + G DKA +
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 531 LREMIARDL 539
+ M+ L
Sbjct: 592 YQAMLQAGL 600
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 41/316 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + + RM + ++P ++ ++ L K H A L +M G TPN VT NI
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I H +A + ++ G+ PD +T++ +++ L G L A ++ +
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ D+ Y L++ K G + A + + + G++P V N+++ + +V +S A+
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 214 DLYSEMIAKGISPNVVTYSALI-----------YGFCIVGQLKQAIGLLDEMVLKNIDP- 261
+L M+A G+ P++ TY+ L+ GFC GQL G M L + P
Sbjct: 625 NLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFC--GQLMAVSGHPAHMFLLKMPPA 682
Query: 262 --------DVVT-----------------YNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
D V+ + +VD L K G EA ++ V + V P
Sbjct: 683 GPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYP 742
Query: 297 DVVTYSSLMDGYCLVN 312
D + S Y L+N
Sbjct: 743 DALREKSY--SYWLIN 756
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 182/371 (49%), Gaps = 46/371 (12%)
Query: 176 AALELLRRIEG-RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY--- 231
+AL +L+ E +G K + Y+ +D L K K +D E + + +VT
Sbjct: 103 SALGILKWAESCKGHKHSSDAYDMAVDILGKAK----KWDRMKEFVERMRGDKLVTLNTV 158
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ ++ F G+ ++A+G+ D + ++ + + N+L+D L KE +
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR------------- 205
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
V +AR V + + +TPN ++NI I+G CK V+E
Sbjct: 206 ----------------------VEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
AL ++EM P ++Y+++I C+ + +E+L EM G P + ITY + +
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ-DLFKKGYN 470
+L ++ + + ++ G +PD YN L+ L + GR+++A+ VF+ ++ + G +
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEKGENDKAEK 529
+N TYN+MI C D+A+ L+ +ME N C D T++ ++ + F++G+ + K
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 530 LLREMIARDLL 540
LL+EM+ + L
Sbjct: 423 LLKEMVTKHHL 433
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 4/321 (1%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ V F+R+ + + N +L +L K K A + Q++ + ITPN T NI
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+ C + A + + G+ P I++ T+I+ C + + + ++ A G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ +TY T+++ L + E AL + R++ G KP + YN +I +L + + A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 215 LYS-EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI-DPDVVTYNILVDA 272
++ EM G+S N TY+++I +C + +AI LL EM N+ +PDV TY L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 273 LGKEGKVREAKNMLAVMI-KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
K G V E +L M+ K + D TY+ L+ C N A +F M + +TP
Sbjct: 411 CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Query: 332 NVQSYNIMIYGLCKIKMVDEA 352
++ +++ + K M + A
Sbjct: 471 RHRTCLLLLEEVKKKNMHESA 491
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 12/300 (4%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA----LQFHDDVLAQGFQLD 157
G+ A + + + G +T + N L+ LC ++ +A LQ +
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH--- 225
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
T+ I+G CK + E AL ++ ++G G +P V+ Y TII C+ +++ S
Sbjct: 226 --TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
EM A G PN +TY+ ++ + ++A+ + M PD + YN L+ L + G
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 278 KVREAKNMLAV-MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV-TPNVQS 335
++ EA+ + V M + GV + TY+S++ YC +E +KA ++ M + P+V +
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIP-NKVTYSSLIDGLCKTGKVSNAWELLDEM 394
Y ++ K V E LL+EM + + ++ TY+ LI LC+ A+ L +EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 7/343 (2%)
Query: 124 ITFNT---LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
+T NT +++ G+ A+ D + G + + + L++ LCK + E A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
L +++ I P +N I CK V A EM G P V++Y+ +I +C
Sbjct: 213 LLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
+ + +L EM P+ +TY ++ +L + + EA + M + G KPD +
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 301 YSSLMDGYCLVNEVNKARDVFNA-MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
Y+ L+ + +A VF M GV+ N +YN MI C D+A+ LL+EM
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 360 DYEKII-PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA-DIITYNSFLDALCKGH 417
+ + P+ TY L+ K G V +LL EM + + D TY + LC+ +
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ L +++I + I P T +LL+ + K + A+ +
Sbjct: 452 MCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 147/312 (47%), Gaps = 6/312 (1%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
T A ++ G+ E A+ + R+ G++ N ++D+LCK K V A + ++
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ I+PN T++ I+G+C ++++A+ + EM P V++Y ++ ++ +
Sbjct: 217 KSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ ML+ M G P+ +TY+++M E +A V M R G P+ YN +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 340 IYGLCKIKMVDEALNLLE-EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
I+ L + ++EA + EM + N TY+S+I C + A ELL EM
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 399 --QPADIITYNSFLDALCK-GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
P D+ TY L + K G V+ G L + + + D TY L+ LC+ +
Sbjct: 396 LCNP-DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 456 DAQEVFQDLFKK 467
A +F+++ +
Sbjct: 455 WAYCLFEEMISQ 466
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 3/259 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + M P +I + ++ + + + +ME G PN +T
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ-FHDDVLAQ 152
+++ + A V + + G PD++ +N LI L G+L A + F ++
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGI-KPTVVMYNTIIDSLCKVKLVSH 211
G ++ TY ++I C + + A+ELL+ +E + P V Y ++ S K V
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
Query: 212 AFDLYSEMIAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
L EM+ K +S + TY+ LI C + A L +EM+ ++I P T +L+
Sbjct: 420 VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Query: 271 DALGKEGKVREAKNMLAVM 289
+ + K+ A+ + +M
Sbjct: 480 EEVKKKNMHESAERIEHIM 498
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 182/371 (49%), Gaps = 46/371 (12%)
Query: 176 AALELLRRIEG-RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY--- 231
+AL +L+ E +G K + Y+ +D L K K +D E + + +VT
Sbjct: 103 SALGILKWAESCKGHKHSSDAYDMAVDILGKAK----KWDRMKEFVERMRGDKLVTLNTV 158
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ ++ F G+ ++A+G+ D + ++ + + N+L+D L KE +
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR------------- 205
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
V +AR V + + +TPN ++NI I+G CK V+E
Sbjct: 206 ----------------------VEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
AL ++EM P ++Y+++I C+ + +E+L EM G P + ITY + +
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ-DLFKKGYN 470
+L ++ + + ++ G +PD YN L+ L + GR+++A+ VF+ ++ + G +
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKME-DNGCIHDPITFETIISALFEKGENDKAEK 529
+N TYN+MI C D+A+ L+ +ME N C D T++ ++ + F++G+ + K
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 530 LLREMIARDLL 540
LL+EM+ + L
Sbjct: 423 LLKEMVTKHHL 433
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 4/321 (1%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ V F+R+ + + N +L +L K K A + Q++ + ITPN T NI
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+ C + A + + G+ P I++ T+I+ C + + + ++ A G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ +TY T+++ L + E AL + R++ G KP + YN +I +L + + A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 215 LYS-EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI-DPDVVTYNILVDA 272
++ EM G+S N TY+++I +C + +AI LL EM N+ +PDV TY L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 273 LGKEGKVREAKNMLAVMI-KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
K G V E +L M+ K + D TY+ L+ C N A +F M + +TP
Sbjct: 411 CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Query: 332 NVQSYNIMIYGLCKIKMVDEA 352
++ +++ + K M + A
Sbjct: 471 RHRTCLLLLEEVKKKNMHESA 491
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 12/300 (4%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA----LQFHDDVLAQGFQLD 157
G+ A + + + G +T + N L+ LC ++ +A LQ +
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH--- 225
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
T+ I+G CK + E AL ++ ++G G +P V+ Y TII C+ +++ S
Sbjct: 226 --TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
EM A G PN +TY+ ++ + ++A+ + M PD + YN L+ L + G
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 278 KVREAKNMLAV-MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV-TPNVQS 335
++ EA+ + V M + GV + TY+S++ YC +E +KA ++ M + P+V +
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIP-NKVTYSSLIDGLCKTGKVSNAWELLDEM 394
Y ++ K V E LL+EM + + ++ TY+ LI LC+ A+ L +EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 7/343 (2%)
Query: 124 ITFNT---LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
+T NT +++ G+ A+ D + G + + + L++ LCK + E A +
Sbjct: 153 VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV 212
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
L +++ I P +N I CK V A EM G P V++Y+ +I +C
Sbjct: 213 LLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
+ + +L EM P+ +TY ++ +L + + EA + M + G KPD +
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 301 YSSLMDGYCLVNEVNKARDVFNA-MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
Y+ L+ + +A VF M GV+ N +YN MI C D+A+ LL+EM
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 360 DYEKII-PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA-DIITYNSFLDALCKGH 417
+ + P+ TY L+ K G V +LL EM + + D TY + LC+ +
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ L +++I + I P T +LL+ + K + A+ +
Sbjct: 452 MCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 147/312 (47%), Gaps = 6/312 (1%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
T A ++ G+ E A+ + R+ G++ N ++D+LCK K V A + ++
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ I+PN T++ I+G+C ++++A+ + EM P V++Y ++ ++ +
Sbjct: 217 KSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ ML+ M G P+ +TY+++M E +A V M R G P+ YN +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 340 IYGLCKIKMVDEALNLLE-EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
I+ L + ++EA + EM + N TY+S+I C + A ELL EM
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 399 --QPADIITYNSFLDALCK-GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
P D+ TY L + K G V+ G L + + + D TY L+ LC+ +
Sbjct: 396 LCNP-DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 456 DAQEVFQDLFKK 467
A +F+++ +
Sbjct: 455 WAYCLFEEMISQ 466
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 3/259 (1%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ + M P +I + ++ + + + +ME G PN +T
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ-FHDDVLAQ 152
+++ + A V + + G PD++ +N LI L G+L A + F ++
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGI-KPTVVMYNTIIDSLCKVKLVSH 211
G ++ TY ++I C + + A+ELL+ +E + P V Y ++ S K V
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
Query: 212 AFDLYSEMIAKG-ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
L EM+ K +S + TY+ LI C + A L +EM+ ++I P T +L+
Sbjct: 420 VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Query: 271 DALGKEGKVREAKNMLAVM 289
+ + K+ A+ + +M
Sbjct: 480 EEVKKKNMHESAERIEHIM 498
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 9/316 (2%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D Y+ LI+ + K GQT A+ L ++ G +P +YN +I + + + A +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 217 SEMI--AKGIS---PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+ KGI PNVVTY+ L+ F G++ Q L ++ + + PDV T+N ++D
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
A GK G ++E + +L M KPD++T++ L+D Y E K F ++ R P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+ ++N MI K +M+D+A + ++M+ IP+ +TY +I G VS A E+
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+E+ + T N+ L+ C+ + L + PD TY L K
Sbjct: 372 EEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Query: 452 GRIKDAQEVFQDLFKK 467
D +E Q L KK
Sbjct: 432 ----DMKEQVQILMKK 443
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 176/415 (42%), Gaps = 22/415 (5%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI---LINC-H 98
R + RIT I + L + + + S I+ P TL+ ++ C H
Sbjct: 40 RSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDH 99
Query: 99 CYL-----GQTTSAFSVLANIL----KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
C+L G++ L +R Y PD ++ LI + G+ A+ ++
Sbjct: 100 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM 159
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLR----RIEG-RGIKPTVVMYNTIIDSLC 204
G + D Y LI ALE +R +++G +P VV YN ++ +
Sbjct: 160 KNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFA 219
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+ V L+ ++ +SP+V T++ ++ + G +K+ +L M PD++
Sbjct: 220 QSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII 279
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
T+N+L+D+ GK+ + + + +++ KP + T++S++ Y ++KA VF M
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 325 ARRGVTPNVQSYN--IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
P+ +Y IM+YG C V A + EE+ + T +++++ C+ G
Sbjct: 340 NDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
A +L D TY A K ++ L+KK+ GI P+
Sbjct: 398 LYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 5/314 (1%)
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA-LGKEGKVREAKN 284
P+ YS LI GQ + A+ L EM PD YN L+ A L K + +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 285 MLAVMIK-QGV---KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+ + K +G+ +P+VVTY+ L+ + +V++ +F + V+P+V ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
K M+ E +L M + P+ +T++ LID K + + + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ T+NS + K +DK + KK+ D P TY ++ CG + A+E+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
F+++ + L T N M+ C+ GL+ EA L D T++ + A +
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 521 KGENDKAEKLLREM 534
++ + L+++M
Sbjct: 431 ADMKEQVQILMKKM 444
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
IP+ YS LI + K G+ A L EM G D YN+ + A K +
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 425 LIKKIID--KGI---QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
++ +D KGI QP++ TYNILL + G++ +F+DL + + +T+N +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
++ K G+ E ++++M N C D ITF +I + +K E +K E+ + ++
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 9/299 (3%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAIS-----LSRQMEITGITPNFVTLNILI 95
F+ M P +N ++T+ + T+ + A+ L + I PN VT NIL+
Sbjct: 156 FSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILL 215
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
G+ ++ ++ PD TFN ++ +G + + + +
Sbjct: 216 RAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECK 275
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D +T+ LI+ K + E + + + KPT+ +N++I + K +++ A +
Sbjct: 276 PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 216 YSEMIAKGISPNVVTYSALI--YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ +M P+ +TY +I YG+C G + +A + +E+ + T N +++
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ G EA + V PD TY L Y + + + + M + G+ PN
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 160/342 (46%), Gaps = 7/342 (2%)
Query: 116 KRGYHPDTITFNTLIK--GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ GY ++ +N IK G K R+L + ++ QG + Q T+A +I + G
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFY--EMRRQGCLITQDTWAIMIMQYGRTGL 728
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLC--KVKLVSHAFDLYSEMIAKGISPNVVTY 231
T A+ + ++ G+ P+ + +I LC K + V A + EMI G P+
Sbjct: 729 TNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELV 788
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ C VG K A LD + P V Y+I + AL + GK+ EA + LA
Sbjct: 789 QDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEG 847
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
+ D TY S++ G ++ KA D N+M G P V Y +I K K +++
Sbjct: 848 ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
L ++M+ E P+ VTY+++I G GKV AW M RG D TY+ F++
Sbjct: 908 VLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
LC+ + + L+ +++DKGI P + + GL + G+
Sbjct: 968 CLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 187/399 (46%), Gaps = 3/399 (0%)
Query: 140 HRALQFHDDVLAQ-GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNT 198
H A++F + V + GF Y T+++ + + EL+ +E G + +
Sbjct: 170 HLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTI 229
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
+I K K + ++ +M G + Y+ +I CI G+ A+ EM+ K
Sbjct: 230 LISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG 289
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
I + TY +L+D + K KV +++ M++ + + L+ +C+ ++ +A
Sbjct: 290 ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEAL 349
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
++ + + + + + + I++ GLC+ + +AL +++ M K+ + V Y +I G
Sbjct: 350 ELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGY 408
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
+ VS A E + + G+P + TY + L K +KG L ++I+ GI+PD
Sbjct: 409 LRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDS 468
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
++ G R+ +A +VF + +KG +Y+ + LC+ +DE + + ++
Sbjct: 469 VAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQ 528
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
M + + F +IS++ + GE +K L++E+ R
Sbjct: 529 MHASKIVIRDDIFSWVISSMEKNGEKEKIH-LIKEIQKR 566
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 167/367 (45%), Gaps = 4/367 (1%)
Query: 173 QTEAALELLRRIEGR-GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
Q A L + R G K YN I K L+ EM +G T+
Sbjct: 657 QGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTW 716
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL-GKEGK-VREAKNMLAVM 289
+ +I + G AI EM + P T+ L+ L K+G+ V EA M
Sbjct: 717 AIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREM 776
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
I+ G PD + C V A+ +++ + G P +Y+I I LC+I +
Sbjct: 777 IRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKL 835
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
+EAL+ L + E+ + ++ TY S++ GL + G + A + ++ M G + Y S
Sbjct: 836 EEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSL 895
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+ K ++K + +K+ + +P + TY ++ G G++++A F+++ ++G
Sbjct: 896 IVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGT 955
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
+ + TY+ IN LC+ ++AL L+S+M D G I F T+ L +G++D A
Sbjct: 956 SPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARI 1015
Query: 530 LLREMIA 536
L++ A
Sbjct: 1016 ALQKKSA 1022
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 134/269 (49%), Gaps = 3/269 (1%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLV--KTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
F M M + P F ++T L K ++ A R+M +G P+ + + C
Sbjct: 736 FKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCL 795
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
C +G T A S L ++ K G+ P T+ ++ I+ LC GKL AL + LDQ
Sbjct: 796 CEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQ 854
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
TY ++++GL + G + AL+ + ++ G KP V +Y ++I K K + + +
Sbjct: 855 YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQK 914
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M + P+VVTY+A+I G+ +G++++A M + PD TY+ ++ L + K
Sbjct: 915 MEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACK 974
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+A +L+ M+ +G+ P + + ++ G
Sbjct: 975 SEDALKLLSEMLDKGIAPSTINFRTVFYG 1003
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 167/374 (44%), Gaps = 36/374 (9%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+N +L+ + ++ L +ME G + T ILI+ + + V +
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
K G+ D +N +I+ LC+ G+ AL+F+ +++ +G TY L++ + K
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAK----- 306
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
V + +I D + ++ +S + L+
Sbjct: 307 --------------SEKVDVVQSIADDMVRICEISEH----------------DAFGYLL 336
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
FC+ G++K+A+ L+ E+ K + D + ILV L + ++ +A ++ +M ++ +
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL- 395
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
D Y ++ GY N+V+KA + F + + G P V +Y ++ L K+K ++ NL
Sbjct: 396 DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNL 455
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
EM I P+ V ++++ G +V+ AW++ M +G +Y+ F+ LC+
Sbjct: 456 FNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Query: 416 GHHVDKGIALIKKI 429
D+ I + ++
Sbjct: 516 SSRYDEIIKIFNQM 529
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/537 (22%), Positives = 229/537 (42%), Gaps = 48/537 (8%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F +M + +N ++ SL A+ ++M GIT T +L++C
Sbjct: 247 FEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAK 306
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVT 160
+ S+ ++++ + F L+K C+ GK+ AL+ ++ + LD
Sbjct: 307 SEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKY 366
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ L+ GLC+ + ALE++ ++ R + + V Y II + VS A + + +
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIK 425
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
G P V TY+ ++ + Q ++ L +EM+ I+PD V +V + +V
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
EA + + M ++G+KP +YS + C + ++ +FN M + ++ +I
Sbjct: 486 EAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
Query: 341 YGLCK---------IKMVDEALNLL---------------EEMDYEKIIPNKVTYSSL-- 374
+ K IK + + N EE+ + P V S+L
Sbjct: 546 SSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPP 605
Query: 375 ---------IDGLCKTGKVSNAW----ELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+ +C+ S W E L++ V+ P ++ A +G+ V +
Sbjct: 606 ALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEV--LRHAKIQGNAVLR 663
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGR-IKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ + K G + + YN+ + + CG+ K + +F ++ ++G + T+ MI
Sbjct: 664 FFSWVGK--RNGYKHNSEAYNMSIK-VAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMI 720
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE-KGEN-DKAEKLLREMI 535
+ GL + A+ +M+D G I TF+ +I+ L E KG N ++A + REMI
Sbjct: 721 MQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMI 777
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 42 NRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYL 101
N M ++ P + + ++ K K + ++ME P+ VT +I + L
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
G+ A++ N+ +RG PD T++ I LC K AL+ ++L +G + +
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Query: 162 ATLINGLCKMGQTEAA 177
T+ GL + G+ + A
Sbjct: 998 RTVFYGLNREGKHDLA 1013
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%)
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
EL+ EM G DI T+ + K + KG+ + +K+ G + D YNI++ L
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
C GR A E ++++ +KG TY +++ + K D ++ M I +
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH 329
Query: 509 ITFETIISALFEKGENDKAEKLLREMIARDL 539
F ++ + G+ +A +L+RE+ +++
Sbjct: 330 DAFGYLLKSFCVSGKIKEALELIRELKNKEM 360
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 9/316 (2%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D Y+ LI+ + K GQT A+ L ++ G +P +YN +I + + + A +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 217 SEMI--AKGIS---PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+ KGI PNVVTY+ L+ F G++ Q L ++ + + PDV T+N ++D
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
A GK G ++E + +L M KPD++T++ L+D Y E K F ++ R P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+ ++N MI K +M+D+A + ++M+ IP+ +TY +I G VS A E+
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+E+ + T N+ L+ C+ + L + PD TY L K
Sbjct: 372 EEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Query: 452 GRIKDAQEVFQDLFKK 467
D +E Q L KK
Sbjct: 432 ----DMKEQVQILMKK 443
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 176/415 (42%), Gaps = 22/415 (5%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI---LINC-H 98
R + RIT I + L + + + S I+ P TL+ ++ C H
Sbjct: 40 RSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDH 99
Query: 99 CYL-----GQTTSAFSVLANIL----KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
C+L G++ L +R Y PD ++ LI + G+ A+ ++
Sbjct: 100 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM 159
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLR----RIEG-RGIKPTVVMYNTIIDSLC 204
G + D Y LI ALE +R +++G +P VV YN ++ +
Sbjct: 160 KNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFA 219
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+ V L+ ++ +SP+V T++ ++ + G +K+ +L M PD++
Sbjct: 220 QSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII 279
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
T+N+L+D+ GK+ + + + +++ KP + T++S++ Y ++KA VF M
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 325 ARRGVTPNVQSYN--IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
P+ +Y IM+YG C V A + EE+ + T +++++ C+ G
Sbjct: 340 NDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
A +L D TY A K ++ L+KK+ GI P+
Sbjct: 398 LYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 5/314 (1%)
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA-LGKEGKVREAKN 284
P+ YS LI GQ + A+ L EM PD YN L+ A L K + +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 285 MLAVMIK-QGV---KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
+ + K +G+ +P+VVTY+ L+ + +V++ +F + V+P+V ++N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
K M+ E +L M + P+ +T++ LID K + + + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ T+NS + K +DK + KK+ D P TY ++ CG + A+E+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
F+++ + L T N M+ C+ GL+ EA L D T++ + A +
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 521 KGENDKAEKLLREM 534
++ + L+++M
Sbjct: 431 ADMKEQVQILMKKM 444
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
IP+ YS LI + K G+ A L EM G D YN+ + A K +
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 425 LIKKIID--KGI---QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
++ +D KGI QP++ TYNILL + G++ +F+DL + + +T+N +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
++ K G+ E ++++M N C D ITF +I + +K E +K E+ + ++
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 9/299 (3%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAIS-----LSRQMEITGITPNFVTLNILI 95
F+ M P +N ++T+ + T+ + A+ L + I PN VT NIL+
Sbjct: 156 FSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILL 215
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
G+ ++ ++ PD TFN ++ +G + + + +
Sbjct: 216 RAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECK 275
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D +T+ LI+ K + E + + + KPT+ +N++I + K +++ A +
Sbjct: 276 PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 216 YSEMIAKGISPNVVTYSALI--YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ +M P+ +TY +I YG+C G + +A + +E+ + T N +++
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ G EA + V PD TY L Y + + + + M + G+ PN
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 181/391 (46%), Gaps = 2/391 (0%)
Query: 74 SLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGL 133
SL EI+ TP + ++L+ C+ + F V + G+ IT NTLI
Sbjct: 152 SLLDTYEISSSTP--LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYS 209
Query: 134 CLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTV 193
+ ++ + + +++T +I LCK G+ + ++LL RI G+ P+V
Sbjct: 210 SKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSV 269
Query: 194 VMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 253
++ +++ + + + + L ++ K + + + YS ++Y G L A + DE
Sbjct: 270 IVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDE 329
Query: 254 MVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNE 313
M+ + + Y + V ++G V+EA+ +L+ M + GV P T++ L+ G+
Sbjct: 330 MLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
K + M RG+ P+ ++N M+ + KI+ V+ A +L + + +P++ TYS
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSH 449
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
LI G + + A +L EM R + S + LC V+ G +K + +
Sbjct: 450 LIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
I+P+ Y+ L+ K G +A V+ ++
Sbjct: 510 IEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 186/397 (46%), Gaps = 13/397 (3%)
Query: 148 DVLAQGFQLDQVT---YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
D L +++ T + L+ K+ E ++ +R+ G +V+ NT+I
Sbjct: 151 DSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSS 210
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
K K+ + +Y I K I PN +T +I C G+LK+ + LLD + K P V+
Sbjct: 211 KSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVI 270
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
LV + +E ++ E+ ++L ++ + + D + YS ++ ++ AR VF+ M
Sbjct: 271 VNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEM 330
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
+RG + N Y + + C+ V EA LL EM+ + P T++ LI G + G
Sbjct: 331 LQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWE 390
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
E + M RG +N + ++ K +V++ ++ K IDKG PD TY+ L
Sbjct: 391 EKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHL 450
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA---LTLMSK--M 499
+ G + I A ++F ++ + + + ++I GLC G + L +M K +
Sbjct: 451 IRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLI 510
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
E N I+D +I A + G+ A+++ EMI+
Sbjct: 511 EPNADIYD-----ALIKAFQKIGDKTNADRVYNEMIS 542
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ V +R+ R P +I ++ +++ ++SL +++ + + + + +I++
Sbjct: 252 EVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVV 311
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
G SA V +L+RG+ ++ + ++ C G + A + ++ G
Sbjct: 312 YAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVS 371
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
T+ LI G + G E LE + RG+ P+ +N ++ S+ K++ V+ A ++
Sbjct: 372 PYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEI 431
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
++ I KG P+ TYS LI GF + QA+ L EM + + P + L+ L
Sbjct: 432 LTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCT 491
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
GKV + L +M K+ ++P+ Y +L+ + + + A V+N M
Sbjct: 492 CGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 159/349 (45%), Gaps = 37/349 (10%)
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
T ++++ ++ K++ + FD++ + G + +V+T + LI+ + ++ + +
Sbjct: 163 TPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVWRI 221
Query: 252 DEMVL-KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
E + K I P+ +T I++ L KEG+++E ++L + + P V+ +SL
Sbjct: 222 YECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSL------ 275
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
++ + + ++E+++LL+ + + ++ + +
Sbjct: 276 -----------------------------VFRVLEEMRIEESMSLLKRLLMKNMVVDTIG 306
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
YS ++ K G + +A ++ DEM RG A+ Y F+ C+ V + L+ ++
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+ G+ P T+N L+ G + G + E + + +G + +N M+ + K +
Sbjct: 367 ESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
A +++K D G + D T+ +I E + D+A KL EM R +
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM 475
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 119/237 (50%)
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L+ Y + + DVF + G T +V + N +I+ K K+ D + E ++
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR 229
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I PN++T +I LCK G++ +LLD + + +I S + + + +++ +
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+L+K+++ K + D Y+I++ K G + A++VF ++ ++G++ N++ Y +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
C++G EA L+S+ME++G TF +I G +K + M+ R L+
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V + + M + ++P FN ++ + + M G+ P+ N
Sbjct: 354 DVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFN 413
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV--- 149
++ + A +L + +G+ PD T++ LI+G + +AL+ ++
Sbjct: 414 EMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR 473
Query: 150 -LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
++ GF++ + +LI GLC G+ EA + L+ ++ R I+P +Y+ +I + K+
Sbjct: 474 KMSPGFEV----FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 209 VSHAFDLYSEMIA 221
++A +Y+EMI+
Sbjct: 530 KTNADRVYNEMIS 542
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
R + ++SY + I+ L K +++ +A L+E + N S L+D L T ++S+
Sbjct: 107 RNLRHGIKSYALTIHILVKARLLIDARALIESS-----LLNSPPDSDLVDSLLDTYEISS 161
Query: 387 AWELLDEMHVR---------------------GQPADIITYNSFLDALCKGHHVDKGIAL 425
+ L+ ++ V+ G +IT N+ + K D +
Sbjct: 162 STPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRI 221
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+ IDK I P+ T I++ LCK GR+K+ ++ + K + +++ + +
Sbjct: 222 YECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLE 281
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
E +E+++L+ ++ + D I + ++ A ++G+ A K+ EM+ R
Sbjct: 282 EMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQR 333
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 153/308 (49%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
++ L+K G+ + D+++ G+ T+ LI + G +E + +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
+P YN I+ SL VK +Y +M+ G +P+V+TY+ +++ +G+
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+ LLDEMV PD+ TYNIL+ L K A N+L M + GV+P V+ +++L+
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
DG ++ + + + G TP+V Y +MI G +++A + +EM + +
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
PN TY+S+I G C GK A LL EM RG + + Y++ ++ L V + +
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Query: 426 IKKIIDKG 433
+K +++KG
Sbjct: 455 VKDMVEKG 462
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 153/311 (49%), Gaps = 14/311 (4%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ-------GF 154
G+ + ++ ++K GY TFN LI C G+ A DV+ Q +
Sbjct: 166 GEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLA----RDVVEQFIKSKTFNY 218
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ + +Y +++ L + Q + + ++ G P V+ YN ++ + ++ +
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
L EM+ G SP++ TY+ L++ + A+ LL+ M ++P V+ + L+D L
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
+ GK+ K + +K G PDVV Y+ ++ GY E+ KA ++F M +G PNV
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
+YN MI G C EA LL+EM+ PN V YS+L++ L GKV A E++ +M
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Query: 395 HVRGQPADIIT 405
+G +I+
Sbjct: 459 VEKGHYVHLIS 469
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D V F + P +N +L SL+ K Y + QM G TP+ +T NI++
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ LG+T + +L ++K G+ PD T+N L+ L K AL + + G +
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ + TLI+GL + G+ EA + G P VV Y +I + A ++
Sbjct: 325 PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEM 384
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ EM KG PNV TY+++I GFC+ G+ K+A LL EM + +P+ V Y+ LV+ L
Sbjct: 385 FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN 444
Query: 276 EGKVREAKNMLAVMIKQG 293
GKV EA ++ M+++G
Sbjct: 445 AGKVLEAHEVVKDMVEKG 462
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 150/307 (48%)
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
Y L+ F G+ K L+DEM+ T+N+L+ G+ G R+
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
+P +Y++++ V + V+ M G TP+V +YNI+++ ++ D
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
LL+EM + P+ TY+ L+ L K A LL+ M G +I + + +
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
D L + ++ + + + G PD+ Y +++ G G ++ A+E+F+++ +KG
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
N +TYN+MI G C G F EA L+ +ME GC + + + T+++ L G+ +A ++
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Query: 531 LREMIAR 537
+++M+ +
Sbjct: 455 VKDMVEK 461
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 150/318 (47%)
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+ F+ Y L+ + G+ +A L+ + G T +N +I + + L
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARD 205
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+ + + P +Y+A+++ V Q K + ++M+ PDV+TYNI++
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMF 265
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
A + GK +L M+K G PD+ TY+ L+ N+ A ++ N M GV P
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEP 325
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
V + +I GL + ++ ++E P+ V Y+ +I G G++ A E+
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
EM +GQ ++ TYNS + C + AL+K++ +G P+ Y+ L++ L
Sbjct: 386 KEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNA 445
Query: 452 GRIKDAQEVFQDLFKKGY 469
G++ +A EV +D+ +KG+
Sbjct: 446 GKVLEAHEVVKDMVEKGH 463
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 144/292 (49%), Gaps = 6/292 (2%)
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK---NIDPDVVTYNILVD 271
L EMI G T++ LI C G+ A ++++ + N P +YN ++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+L + + + M++ G PDV+TY+ +M + + ++ + + M + G +P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
++ +YNI+++ L ALNLL M + P + +++LIDGL + GK+ +
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
DE G D++ Y + G ++K + K++ +KG P++ TYN ++ G C
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
G+ K+A + +++ +G N N Y+T++N L G EA ++ M + G
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
D + M++ +P + +N +L L A++L M G+ P +
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ G+ + + +K G PD + + +I G G+L +A + ++ +G
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ TY ++I G C G+ + A LL+ +E RG P V+Y+T++++L V A
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
Query: 214 DLYSEMIAKG 223
++ +M+ KG
Sbjct: 453 EVVKDMVEKG 462
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 112/278 (40%), Gaps = 41/278 (14%)
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
Y++L+ + G+ + ++ MIK G T++ L+ C E ARDV
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 326 RRGV---TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
+ P SYN +++ L +K LID
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQY-----------------------KLID------ 242
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
W + ++M G D++TYN + A + D+ L+ +++ G PD+ TYN
Sbjct: 243 -----W-VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYN 296
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDN 502
ILL L + A + + + G + T+I+GL + G + M +
Sbjct: 297 ILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV 356
Query: 503 GCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
GC D + + +I+ GE +KAE++ +EM + L
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 14/320 (4%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N LN LI LG++ +AF V + + G+ P+ T+ ++ LC + A
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL--LRRIEGRGIKPTVVMYNTIIDSLC 204
+ +L G + +I CK G+ E A + L + + + + P V T+I +LC
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALC 347
Query: 205 K----VKLVSHAF-DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
K + DL E +GI P +S +I+ C + +K A LL +M+ K
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGP 403
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
P +N++V A K G + EAK +L +M +G+KPDV TY+ ++ GY +++A++
Sbjct: 404 APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQE 463
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+ ++ + +Y+ +I G CKI+ DEAL LL EMD + PN Y+ LI C
Sbjct: 464 ILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Query: 380 -KTGKVSNAWELLDEMHVRG 398
K A L +EM +G
Sbjct: 524 LKALDWEKAEVLFEEMKQKG 543
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 151/322 (46%), Gaps = 12/322 (3%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
N+++ K A + + E G TPN T + + C A SV +L
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKM-GQT 174
K G + +I C GK A ++ + L ATLI LCK G
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTI 353
Query: 175 EAALELLRRIEG----RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
A E+L + G RGIKP ++ +I SLC+++ V A L +MI+KG +P
Sbjct: 354 TFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
++ +++ G L +A +L M + + PDV TY +++ K G + EA+ +LA
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K+ K VTY +L+ GYC + E ++A + N M R GV PN YN +I C +K +D
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC-LKALD 528
Query: 351 --EALNLLEEMDYEKIIPNKVT 370
+A L EEM + + N ++
Sbjct: 529 WEKAEVLFEEMKQKGLHLNAIS 550
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 153/313 (48%), Gaps = 6/313 (1%)
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
LI K+G+++AA ++ + E G P Y +++LCK + A + +M+ G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGL--LDEMVLKNIDPDVVTYNILVDALGK-EGKVR 280
+ +I FC G+ ++A + L + K++ P V L+ AL K +G +
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTIT 354
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A+ ML + + + + +S ++ C + V A+ + M +G P +N+++
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
+ K +DEA +L+ M+ + P+ TY+ +I G K G + A E+L E + +
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC-KCGRIKDAQE 459
+TY++ + CK D+ + L+ ++ G+QP+ YN L+ C K + A+
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEV 534
Query: 460 VFQDLFKKGYNLN 472
+F+++ +KG +LN
Sbjct: 535 LFEEMKQKGLHLN 547
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 149/319 (46%), Gaps = 10/319 (3%)
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
N+ + LI F +G+ K A + + P+ TY + ++AL K + A ++
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK- 345
M+K GV + +++ +C + +A V+ + + + +I LCK
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKN 349
Query: 346 ---IKMVDEAL-NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
I E L +L E I P +S +I LC+ V +A LL +M +G
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAP 405
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
+N + A K +D+ ++K + +G++PD+ TY +++ G K G + +AQE+
Sbjct: 406 GNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEIL 465
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
+ KK L+ TY+ +I G CK +DEAL L+++M+ G + + +I + K
Sbjct: 466 AEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK 525
Query: 522 G-ENDKAEKLLREMIARDL 539
+ +KAE L EM + L
Sbjct: 526 ALDWEKAEVLFEEMKQKGL 544
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 35 DDTVSFFNRML-------QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPN 87
D T++F ML + R P F+ V+ SL + ++ A +L M G P
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKP---FSDVIHSLCRMRNVKDAKALLLDMISKGPAPG 406
Query: 88 FVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHD 147
N++++ G A VL + RG PD T+ +I G G + A +
Sbjct: 407 NAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILA 466
Query: 148 DVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC-KV 206
+ + +L VTY LI G CK+ + + AL+LL ++ G++P YN +I S C K
Sbjct: 467 EAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKA 526
Query: 207 KLVSHAFDLYSEMIAKGISPNVVT 230
A L+ EM KG+ N ++
Sbjct: 527 LDWEKAEVLFEEMKQKGLHLNAIS 550
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 6/276 (2%)
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL---VDALGKEGKVREAKNML 286
TY+A++ L++EM KN + +VT + + + L K GK +A +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 287 AVMIKQ-GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
M K GVK D + +SLMD N + A +VF + + P+ +++NI+I+G CK
Sbjct: 227 LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCK 285
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
+ D+A +++ M + P+ VTY+S ++ CK G E+L+EM G +++T
Sbjct: 286 ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT 345
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
Y + +L K V + + + +K+ + G PD Y+ L+ L K GR KDA E+F+D+
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMT 405
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
+G + YNTMI+ + AL L+ +MED
Sbjct: 406 NQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 173/392 (44%), Gaps = 77/392 (19%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIE-GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
T + ++ L K G+ A++ +E G+K + N+++D+L K + HA +++
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-- 262
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
+ L D I PD T+NIL+ K K
Sbjct: 263 -----------------------------LKLFD-----TIKPDARTFNILIHGFCKARK 288
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+A+ M+ +M PDVVTY+S ++ YC + + ++ M G PNV +Y I
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTI 348
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+++ L K K V EAL + E+M + +P+ YSSLI L KTG+ +A E+ ++M +G
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDK-------------------------- 432
D++ YN+ + A + + L+K++ D+
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMK 468
Query: 433 ------------GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMI 480
+ D+ TY +L+ GLC G++++A F++ +KG + T ++
Sbjct: 469 LLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Query: 481 NGLCKEGLFDEALTLMSKMEDNGCI--HDPIT 510
+ L K+ + + L + S ++ I H P++
Sbjct: 529 DELEKKNMAEAKLKIQSLVQSKTMIDSHSPLS 560
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 160/347 (46%), Gaps = 8/347 (2%)
Query: 111 LANILKRGYHPDTITFNTL---IKGLCLHGKLHRALQ-FHDDVLAQGFQLDQVTYATLIN 166
L N + + +T +T+ ++ L GK ++A+ F + + G + D + +L++
Sbjct: 188 LVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMD 247
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
L K E A E+ ++ IKP +N +I CK + A + M +P
Sbjct: 248 ALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTP 306
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+VVTY++ + +C G ++ +L+EM +P+VVTY I++ +LGK +V EA +
Sbjct: 307 DVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVY 366
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M + G PD YSSL+ A ++F M +GV +V YN MI
Sbjct: 367 EKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHH 426
Query: 347 KMVDEALNLLEEMDYEK---IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
+ AL LL+ M+ E+ PN TY+ L+ C K+ LL M D+
Sbjct: 427 SRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDV 486
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
TY + LC V++ ++ + KG+ P T +L+D L K
Sbjct: 487 STYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 10/260 (3%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
DD + + M TP ++ + + + K + + +M G PN VT I+
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
++ Q A V + + G PD +++LI L G+ A + +D+ QG
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRI---EGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+ D + Y T+I+ + E AL LL+R+ EG P V Y ++ C K +
Sbjct: 410 RRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKL 469
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
L M+ +S +V TY LI G C+ G++++A +E V K + P T +LVD
Sbjct: 470 LGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
Query: 272 ALGKEGKVREAKNMLAVMIK 291
L E KNM +K
Sbjct: 530 EL-------EKKNMAEAKLK 542
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 141/305 (46%), Gaps = 4/305 (1%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
I N ++ +LVK A + ++ I P+ T NILI+ C + A +++
Sbjct: 240 IAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDL 298
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ + PD +T+ + ++ C G R + +++ G + VTY +++ L K Q
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
AL + +++ G P Y+++I L K A +++ +M +G+ +V+ Y+
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 234 LIYGFCIVGQLKQAIGLLDEMVL---KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
+I + + A+ LL M ++ P+V TY L+ + K++ +L M+
Sbjct: 419 MISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMV 478
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K V DV TY L+ G C+ +V +A F R+G+ P + +++ L K M +
Sbjct: 479 KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAE 538
Query: 351 EALNL 355
L +
Sbjct: 539 AKLKI 543
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 3/261 (1%)
Query: 49 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAF 108
I P FN ++ K + + A ++ M++T TP+ VT + +C G
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
+L + + G +P+ +T+ ++ L ++ AL ++ + G D Y++LI+ L
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM---IAKGIS 225
K G+ + A E+ + +G++ V++YNT+I + A L M + S
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
PNV TY+ L+ C ++K LL MV ++ DV TY +L+ L GKV EA
Sbjct: 449 PNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLF 508
Query: 286 LAVMIKQGVKPDVVTYSSLMD 306
+++G+ P T L+D
Sbjct: 509 FEEAVRKGMVPRDSTCKMLVD 529
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 178/358 (49%), Gaps = 13/358 (3%)
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTI---IDSLCKVKL 208
QG+ Y ++I+ L KM + + A L+ E R P++V T+ I C V
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLID--EMRKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP-DVVTYN 267
V A + + + + + +L+ C + A L+ K+ P D ++N
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270
Query: 268 ILVDALGKE-GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
I+++ G REA+ + M GVK DVV+YSS++ Y +NK +F+ M +
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK-IIPNKVTYSSLIDGLCKTGKVS 385
+ P+ + YN +++ L K V EA NL++ M+ EK I PN VTY+SLI LCK K
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A ++ DEM +G I TY++F+ L G V + +A ++K+ G +P + TY +L+
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKM---GCEPTVETYIMLI 447
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
LC+ + ++ ++ +K + +Y MI+GL G +EA +M+D G
Sbjct: 448 RKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 132/255 (51%), Gaps = 5/255 (1%)
Query: 116 KRGYHPDTITFNTLIKGLC-LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
K Y D +FN ++ G C + G A + ++ G + D V+Y+++I+ K G
Sbjct: 259 KDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSL 318
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA-KGISPNVVTYSA 233
L+L R++ I+P +YN ++ +L K VS A +L M KGI PNVVTY++
Sbjct: 319 NKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNS 378
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI C + ++A + DEM+ K + P + TY+ + L +V E +LA M K G
Sbjct: 379 LIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFE---LLAKMRKMG 435
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+P V TY L+ C + + +++ M + V P++ SY +MI+GL ++EA
Sbjct: 436 CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAY 495
Query: 354 NLLEEMDYEKIIPNK 368
+EM + + PN+
Sbjct: 496 GYYKEMKDKGMRPNE 510
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 170/356 (47%), Gaps = 17/356 (4%)
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL---IYGFCIVGQ 243
+G +V Y+++I L K++ A+ L EM + SP++V L I +C V
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
+ +AI ++ + + L+ AL + V +A +++ K D +++
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCN-KDKYPFDAKSFNI 271
Query: 304 LMDGYC-LVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
+++G+C ++ +A V+ M GV +V SY+ MI K +++ L L + M E
Sbjct: 272 VLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE 331
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV-RGQPADIITYNSFLDALCKGHHVDK 421
I P++ Y++++ L K VS A L+ M +G +++TYNS + LCK ++
Sbjct: 332 CIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEE 391
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ---DLFKKGYNLNNWTYNT 478
+ ++++KG+ P + TY+ + L + +EVF+ + K G TY
Sbjct: 392 AKQVFDEMLEKGLFPTIRTYHAFMRIL------RTGEEVFELLAKMRKMGCEPTVETYIM 445
Query: 479 MINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+I LC+ FD L L +M++ D ++ +I LF G+ ++A +EM
Sbjct: 446 LIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V ++ F+ + ++ I +F +L++L + K+ S A L + + N
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNKDKYPFDAKSFN 270
Query: 93 ILINCHC-YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
I++N C +G A V + G D ++++++I G L++ L+ D +
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEG-RGIKPTVVMYNTIIDSLCKVKLVS 210
+ + D+ Y +++ L K A L++ +E +GI+P VV YN++I LCK +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 211 HAFDLYSEMIAKGISPNVVTYSA--------------------------------LIYGF 238
A ++ EM+ KG+ P + TY A LI
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
C + L DEM K + PD+ +Y +++ L GK+ EA M +G++P+
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 124/283 (43%), Gaps = 43/283 (15%)
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM---DGYCLVNEVNKARD 319
V Y+ ++ LGK K A ++ M K P +V +L+ YC V++V KA +
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
F+A R + + + ++ LC+ K V +A +L+ + +K + +++ +++G C
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIF-CNKDKYPFDAKSFNIVLNGWC 277
Query: 380 KT-GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
G A + EM G D+++Y+S + KG ++K + L ++ + I+PD
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD- 336
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
YN +++ L K EA LM
Sbjct: 337 ----------------------------------RKVYNAVVHALAKASFVSEARNLMKT 362
Query: 499 MEDNGCIH-DPITFETIISALFEKGENDKAEKLLREMIARDLL 540
ME+ I + +T+ ++I L + + ++A+++ EM+ + L
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 405
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 189/428 (44%), Gaps = 42/428 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D +S F + + + F+ +L +VK A + R+
Sbjct: 96 RLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK-------------- 141
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+CY + S + L N L+K LC + A Q ++ Q
Sbjct: 142 -----YCYGWEVNSRITAL---------------NLLMKVLCQVNRSDLASQVFQEMNYQ 181
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELL----RRIEGRGIKPTVVMYNTIIDSLCKVKL 208
G D+ +Y L+ G C G+ E A LL RI +G +V+Y ++D+LC
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ--LKQAIGLLDEMVLKNIDPDVVTY 266
V A ++ +++ KG+ Y + G +++ LL E +++ P + +Y
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
+ + L +EGK+ E + +L M +G +P Y + + C ++ +A V N
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 327 RG-VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE-KIIPNKVTYSSLIDGLCKTGKV 384
+G P V YN++I GLC EA+ L++M + + N+ TY +L+DGLC+ G+
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
A ++++EM ++ + TY+ + LC + + +++++ + + P+ + L
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Query: 445 LDGLCKCG 452
+ +C C
Sbjct: 482 AESVCFCA 489
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 9/383 (2%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR-I 184
F ++I+ G+L A+ + +++ TL+ + K + EAA + R+
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
G + + N ++ LC+V A ++ EM +G P+ +Y L+ GFC+ G+L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 245 KQAIGLLDEMVL----KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
++A LL M K D+V Y IL+DAL G+V +A +L ++++G+K
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 301 YSSLMDGYCLVNE--VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
Y + G+ + + + + + RG P + SY+ M L + + E +L
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII-TYNSFLDALCKGH 417
M + P Y + + LC+ GK+ A ++++ ++G + YN + LC
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 418 HVDKGIALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+ + +KK+ + + TY L+DGLC+ G+ +A +V +++ K + TY
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 477 NTMINGLCKEGLFDEALTLMSKM 499
+ MI GLC EA+ + +M
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEM 466
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 164/389 (42%), Gaps = 48/389 (12%)
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
+Y T+ID L K V + M ++++I F G+L+ AI L +
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 255 VLKNIDPDVVTYNILVDALGKEGKVREAKNML-AVMIKQGVKPDVVTYSSLMDGYCLVNE 313
N ++++ L+ + KE ++ A ++ V + + LM C VN
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK----- 368
+ A VF M +G P+ SY I++ G C ++EA +LL M + I K
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR--ISQKGSGED 225
Query: 369 -VTYSSLIDGLCKTGKVSNA--------------------------WE-----------L 390
V Y L+D LC G+V +A WE L
Sbjct: 226 IVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRL 285
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
L E +RG + +Y++ L + + +G ++ + KG +P Y + LC+
Sbjct: 286 LTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCR 345
Query: 451 CGRIKDAQEVFQDLFKKGYNLNN-WTYNTMINGLCKEGLFDEALTLMSKMEDN-GCIHDP 508
G++K+A V +G+ L YN +I GLC +G EA+ + KM C+ +
Sbjct: 346 AGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 509 ITFETIISALFEKGENDKAEKLLREMIAR 537
T++T++ L G+ +A +++ EM+ +
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 189/428 (44%), Gaps = 42/428 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++D +S F + + + F+ +L +VK A + R+
Sbjct: 96 RLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK-------------- 141
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+CY + S + L N L+K LC + A Q ++ Q
Sbjct: 142 -----YCYGWEVNSRITAL---------------NLLMKVLCQVNRSDLASQVFQEMNYQ 181
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELL----RRIEGRGIKPTVVMYNTIIDSLCKVKL 208
G D+ +Y L+ G C G+ E A LL RI +G +V+Y ++D+LC
Sbjct: 182 GCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ--LKQAIGLLDEMVLKNIDPDVVTY 266
V A ++ +++ KG+ Y + G +++ LL E +++ P + +Y
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
+ + L +EGK+ E + +L M +G +P Y + + C ++ +A V N
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 327 RG-VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE-KIIPNKVTYSSLIDGLCKTGKV 384
+G P V YN++I GLC EA+ L++M + + N+ TY +L+DGLC+ G+
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
A ++++EM ++ + TY+ + LC + + +++++ + + P+ + L
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Query: 445 LDGLCKCG 452
+ +C C
Sbjct: 482 AESVCFCA 489
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 9/383 (2%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR-I 184
F ++I+ G+L A+ + +++ TL+ + K + EAA + R+
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
G + + N ++ LC+V A ++ EM +G P+ +Y L+ GFC+ G+L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 245 KQAIGLLDEMVL----KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
++A LL M K D+V Y IL+DAL G+V +A +L ++++G+K
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 301 YSSLMDGYCLVNE--VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
Y + G+ + + + + + RG P + SY+ M L + + E +L
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII-TYNSFLDALCKGH 417
M + P Y + + LC+ GK+ A ++++ ++G + YN + LC
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 418 HVDKGIALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+ + +KK+ + + TY L+DGLC+ G+ +A +V +++ K + TY
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 477 NTMINGLCKEGLFDEALTLMSKM 499
+ MI GLC EA+ + +M
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEM 466
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 164/389 (42%), Gaps = 48/389 (12%)
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
+Y T+ID L K V + M ++++I F G+L+ AI L +
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 255 VLKNIDPDVVTYNILVDALGKEGKVREAKNML-AVMIKQGVKPDVVTYSSLMDGYCLVNE 313
N ++++ L+ + KE ++ A ++ V + + LM C VN
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK----- 368
+ A VF M +G P+ SY I++ G C ++EA +LL M + I K
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR--ISQKGSGED 225
Query: 369 -VTYSSLIDGLCKTGKVSNA--------------------------WE-----------L 390
V Y L+D LC G+V +A WE L
Sbjct: 226 IVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRL 285
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
L E +RG + +Y++ L + + +G ++ + KG +P Y + LC+
Sbjct: 286 LTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCR 345
Query: 451 CGRIKDAQEVFQDLFKKGYNLNN-WTYNTMINGLCKEGLFDEALTLMSKMEDN-GCIHDP 508
G++K+A V +G+ L YN +I GLC +G EA+ + KM C+ +
Sbjct: 346 AGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 509 ITFETIISALFEKGENDKAEKLLREMIAR 537
T++T++ L G+ +A +++ EM+ +
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEMLIK 434
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 154/301 (51%), Gaps = 6/301 (1%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
A+ + + + GI + V + L+ C A ++ + +R + D N ++
Sbjct: 197 AVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILN 255
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
G C+ G +H A +F D++A + D V+Y T+IN L K G+ A+EL R + P
Sbjct: 256 GWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNP 315
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
V + N +ID+LC K + A +++ E+ KG PNVVTY++L+ C + + ++ L+
Sbjct: 316 DVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELV 375
Query: 252 DEMVLK--NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC 309
+EM LK + P+ VT++ L L + ++ +L M K + Y+ + Y
Sbjct: 376 EEMELKGGSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYV 432
Query: 310 LVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV 369
++ K R++++ M R G+ P+ ++Y I I+GL + EAL+ +EM + ++P
Sbjct: 433 QWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPR 492
Query: 370 T 370
T
Sbjct: 493 T 493
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 177/361 (49%), Gaps = 13/361 (3%)
Query: 114 ILKRGYH-PDTITFNTLIKGLCLHGKLHRALQFH---DDVLAQGFQLDQVTYATLINGLC 169
++K+ H ++ +N ++ L GK+ R +FH D++ + +++ TY L+N
Sbjct: 133 VVKQSVHLSSSMLYNEILDVL---GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYA 189
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
+ + A+ + R + GI +V ++ ++ LC+ K V A L+ + ++
Sbjct: 190 AAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIK 248
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
+ ++ G+C++G + +A +++ PDVV+Y +++AL K+GK+ +A + M
Sbjct: 249 AMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAM 308
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
PDV ++++D C + +A +VF ++ +G PNV +YN ++ LCKI+
Sbjct: 309 WDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRT 368
Query: 350 DEALNLLEEMDYE--KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
++ L+EEM+ + PN VT+S L+ ++ V +L+ M YN
Sbjct: 369 EKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYN 425
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 467
+ +K + ++ G+ PD TY I + GL G+I +A FQ++ K
Sbjct: 426 LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSK 485
Query: 468 G 468
G
Sbjct: 486 G 486
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
+ ++YN I+D L K++ ++ EM + N TY L+ + ++ +A+G+
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 252 DEMVLKNIDPDVVTY----------------------------------NILVDALGKEG 277
+ ID D+V + N++++ G
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLG 261
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
V EAK +I +PDVV+Y ++++ ++ KA +++ AM P+V+ N
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
+I LC K + EAL + E+ + PN VTY+SL+ LCK + WEL++EM ++
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 398 G---QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
G P D +T++ L + VD +++++ + YN++ + +
Sbjct: 382 GGSCSPND-VTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKE 437
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
+ +E++ ++ + G + TY I+GL +G EAL+ +M G + +P T
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
NV + F+ ++ + P ++ + ++ +L K A+ L R M T P+ N
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I+ C+ + A V I ++G P+ +T+N+L+K LC + + + +++ +
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 153 GFQL--DQVTYATLINGLCKMGQTEAALEL-LRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
G + VT++ L+ K Q +++ L R+ + T +YN + +
Sbjct: 382 GGSCSPNDVTFSYLL----KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKE 437
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
+++SEM G+ P+ TY+ I+G G++ +A+ EM+ K + P+ T +L
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 288 VMIKQGVK-PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
+++KQ V + Y+ ++D + + VF+ M++R N ++Y +++
Sbjct: 132 LVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAA 191
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
VDEA+ + E I + V + L+ LC+ V A E L R DI
Sbjct: 192 HKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAM 250
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
N L+ C +V + K II +PD+ +Y +++ L K G++ A E+++ ++
Sbjct: 251 NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWD 310
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDK 526
N + N +I+ LC + EAL + ++ + G + +T+ +++ L + +K
Sbjct: 311 TRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEK 370
Query: 527 AEKLLREM 534
+L+ EM
Sbjct: 371 VWELVEEM 378
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/561 (21%), Positives = 234/561 (41%), Gaps = 56/561 (9%)
Query: 9 RFPFLSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKH 68
RF + P+ + D F+ M + + ++ ++ + +
Sbjct: 106 RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENR 161
Query: 69 YSTAISLSRQMEITGITPN-FVTLNILINC-HCYLGQTTSAFSVLANILKRGYHPDTITF 126
+ L R M G+ P+ F+ IL C +C G + + + ++K G
Sbjct: 162 WREVAKLFRLMMKDGVLPDDFLFPKILQGCANC--GDVEAGKVIHSVVIKLGMSSCLRVS 219
Query: 127 NTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEG 186
N+++ G+L A +F + + D + + +++ C+ G+ E A+EL++ +E
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
GI P +V +N +I ++ A DL +M GI+ +V T++A+I G G Q
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
A+ + +M L + P+ VT V A + + + ++ +K G DV+ +SL+D
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
Y ++ AR VF+++ + +V ++N MI G C+ +A L M + P
Sbjct: 396 MYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHVDKGIAL 425
N +T++++I G K G A +L M G+ + T+N + + D+ + L
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 426 IKKIIDKGIQPDMCTY-----------------------------------NILLDGLCK 450
+K+ P+ T N L D K
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAK 571
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
G I+ ++ +F + K + T+N++I G G + AL L ++M+ G + T
Sbjct: 572 SGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 511 FETIISALFEKGENDKAEKLL 531
+II A G D+ +K+
Sbjct: 628 LSSIILAHGLMGNVDEGKKVF 648
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 193/437 (44%), Gaps = 48/437 (10%)
Query: 133 LCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPT 192
LC +G L A + D + QG ++ + TY L+ G L R G +P
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPD 114
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
V + ++ K ++ A ++ M + N+ T+SA+I + + ++ L
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
M+ + PD + ++ G V K + +V+IK G+ + +S++ Y
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
E++ A F M R +V ++N ++ C+ +EA+ L++EM+ E I P VT++
Sbjct: 231 ELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
LI G + GK A +L+ +M G AD+ T+ + + L + + + +K+
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 433 GIQPDMCTY-----------------------------------NILLDGLCKCGRIKDA 457
G+ P+ T N L+D KCG+++DA
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
++VF + N + +T+N+MI G C+ G +A L ++M+D + IT+ T+IS
Sbjct: 407 RKVFDSV----KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 518 LFEKGENDKAEKLLREM 534
+ G+ +A L + M
Sbjct: 463 YIKNGDEGEAMDLFQRM 479
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 176/452 (38%), Gaps = 78/452 (17%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ V M + I+P ++ +N ++ + A+ L ++ME GIT + T +
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I+ + G A + + G P+ +T + + +++ + H + GF
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 155 -------------------------------QLDQVTYATLINGLCKMGQTEAALELLRR 183
D T+ ++I G C+ G A EL R
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTR 443
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG-ISPNVVTYSALIYGFCIVG 242
++ ++P ++ +NT+I K A DL+ M G + N T++ +I G+ G
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTY-----------------------------------N 267
+ +A+ L +M P+ VT N
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
L D K G + ++ + M + D++T++SL+ GY L A +FN M +
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM--DYEKIIPNKVTYSSLIDGLCKTGKVS 385
G+TPN + + +I + VDE + + DY IIP S+++ + ++
Sbjct: 620 GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH-IIPALEHCSAMVYLYGRANRLE 678
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
A + + EM+++ + + SFL C+ H
Sbjct: 679 EALQFIQEMNIQSETP---IWESFLTG-CRIH 706
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 186/450 (41%), Gaps = 51/450 (11%)
Query: 86 PNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
PN + N + H SA + ++ G P++ TF ++K Q
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
H VL G LD + +LI+ + G+ E A ++ + R VV Y +I
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYAS 212
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
+ +A L+ E+ K +VV+++A+I G+ G K+A+ L +M+ N+ PD T
Sbjct: 213 RGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
+V A + G + + + + G ++ ++L+D Y E+ A +F +
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
+ +V S+N +I G + + EAL L +EM PN VT S++ G +
Sbjct: 329 YK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 386 -NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
W +HV ++DK + KG+ L
Sbjct: 385 IGRW-----IHV---------------------YIDKRL--------KGVTNASSLRTSL 410
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
+D KCG I+ A +VF + K +L++W N MI G G D + L S+M G
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHK--SLSSW--NAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREM 534
D ITF ++SA G D + R M
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 46/292 (15%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
+ V+ N +I+ + G A + +++K PD T T++ G + Q H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
+ GF + LI+ K G+ E A L R+ + V+ +NT+I +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHM 345
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTY----------------------------------- 231
L A L+ EM+ G +PN VT
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 232 --SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
++LI + G ++ A + + ++ K++ ++N ++ G+ + ++ + M
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSRM 461
Query: 290 IKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR-RGVTPNVQSYNIMI 340
K G++PD +T+ L+ ++ R +F M + +TP ++ Y MI
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
+P+++ ++++ G+ L ++ A ++ M G+ PN ++ ++ K K E
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
+ + + ++SLI + G++ +A ++ D+ R D+++Y AL
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYT----ALI 207
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
KG+ I +K+ D+ D+ ++N ++ G + G K+A E+F+D+ K +
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
T T+++ + G + + ++D+G + +I + GE + A L +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 535 IARDLL 540
+D++
Sbjct: 328 PYKDVI 333
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 230/508 (45%), Gaps = 17/508 (3%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCY 100
F+R+ + + P + ++ + +Y A ++++ G PN L LIN
Sbjct: 372 FHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAK 431
Query: 101 LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL-----QFHDDVLAQGFQ 155
G A + ++ G +I +++ GK+ FH+ + +
Sbjct: 432 YGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHI-----R 485
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
L+Q ++++L+ K G + L LLR + R +Y+ +I S + ++ A +
Sbjct: 486 LNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKI 545
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
Y+ + N+ S +I + ++G+ +A L + + D + ++I+V K
Sbjct: 546 YNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVK 605
Query: 276 EGKVREAKNMLAVMIKQ-GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
G + EA ++L +M +Q + PDV + ++ Y + +K + ++ + + G+ N +
Sbjct: 606 AGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQE 665
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID--GLCKTGKVSNAWELLD 392
YN +I + +DE EEM PN VT++ L+D G K K N LL
Sbjct: 666 MYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLA 725
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
+ H D+I+YN+ + A K + IK + G + YN LLD K
Sbjct: 726 KRH---GVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+++ + + + + K +++TYN MIN ++G DE ++ +++++G D ++
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYN 842
Query: 513 TIISALFEKGENDKAEKLLREMIARDLL 540
T+I A G ++A L++EM R+++
Sbjct: 843 TLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/492 (19%), Positives = 218/492 (44%), Gaps = 3/492 (0%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M Q R+ + + +L + + A S+ ME G +PN + N LI + + +
Sbjct: 305 MKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFK 364
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
+A + + G PD ++ ++I+G A ++ ++ G++ + T
Sbjct: 365 MEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFT 424
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
LIN K G + A++ + + G G + + ++ I+ + KV + +
Sbjct: 425 LINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNH 483
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
I N ++S+L+ + G + +GLL E ++ + Y++L+ + + G++ +A
Sbjct: 484 IRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAV 543
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
+ ++ + ++ S+++D Y ++ E ++A ++ + GV + ++I++
Sbjct: 544 KIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMY 603
Query: 344 CKIKMVDEALNLLEEMDYEK-IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
K ++EA ++LE MD +K I+P+ + ++ K L + G +
Sbjct: 604 VKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWN 663
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
YN ++ + +D+ +++I G P+ T+N+LLD K K E+F
Sbjct: 664 QEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL 723
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
L K+ ++ +YNT+I K + + + M+ +G + T++ A +
Sbjct: 724 -LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 523 ENDKAEKLLREM 534
+ +K +L+ M
Sbjct: 783 QMEKFRSILKRM 794
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 139/296 (46%), Gaps = 4/296 (1%)
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDALGKEGKVREAKNM 285
N V YS ++ + +A L+ E+ +N ++ A K+G V+ A
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
+M++ GV+P+V T LM Y V +A F+ M + G+ +Y+ MI +
Sbjct: 233 FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYTR 291
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
+++ D+A +++ M +++ + +++ + GK+ A +L M G +II
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIA 351
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
YN+ + K ++ L ++ + G++PD +Y +++G + ++A+ +Q+L
Sbjct: 352 YNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELK 411
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
+ GY N++ T+IN K G D A+ + M GC + I II +EK
Sbjct: 412 RCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL--GIILQAYEK 465
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 163/368 (44%), Gaps = 24/368 (6%)
Query: 36 DTVSFFNRMLQ------MRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFV 89
D V +N ++ + IT +I+ V+ +S A L ++ +G+ + +
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMG------EFSEAEKLYLNLKSSGVVLDRI 594
Query: 90 TLNILINCHCYLGQTTSAFSVLANI-LKRGYHPDTITFNTLIKGLCLHGKLHRALQ-FHD 147
+I++ + G A SVL + ++ PD F +++ + L LQ +
Sbjct: 595 GFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR-IYQKCDLQDKLQHLYY 653
Query: 148 DVLAQGFQLDQVTYATLINGLCK---MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
+ G +Q Y +IN + + + E + R G P V +N ++D
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRY---GFTPNTVTFNVLLDVYG 710
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
K KL +L+ G+ +V++Y+ +I + + M +
Sbjct: 711 KAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE 769
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
YN L+DA GK+ ++ + +++L M K PD TY+ +++ Y +++ DV +
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
G+ P++ SYN +I MV+EA+ L++EM IIP+KVTY++L+ L + +
Sbjct: 830 KESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Query: 385 SNA--WEL 390
A W L
Sbjct: 890 LEAIKWSL 897
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
Query: 83 GITPNFVTLNILINCH--CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLH 140
G TPN VT N+L++ + L + + +LA KR D I++NT+I +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFLLA---KRHGVVDVISYNTIIAAYGKNKDYT 750
Query: 141 RALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTII 200
++ GF + Y TL++ K Q E +L+R++ P YN +I
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 201 DSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID 260
+ + + D+ E+ G+ P++ +Y+ LI + I G +++A+GL+ EM +NI
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
PD VTY LV AL + + EA M + G+
Sbjct: 871 PDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 202/468 (43%), Gaps = 80/468 (17%)
Query: 142 ALQFHDDVLAQGFQLDQ-VTYATLINGLCKMGQTEAALELLRRIEG-RGIKPTVVMYNTI 199
A++F D + G + V Y+ ++ L + + + A +L++ + G + + ++NT+
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 200 IDSLCK---VKLVSHAFDLYSEMIAKGISPNVVT-------------------------- 230
I + K VKL S F + M+ G+ PNV T
Sbjct: 217 IYACTKKGNVKLASKWFHM---MLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRK 273
Query: 231 --------YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
YS++I + + +A ++D M + + + ++++A ++GK+ A
Sbjct: 274 FGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELA 333
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+++L M G P+++ Y++L+ GY + ++ A+ +F+ + G+ P+ SY MI G
Sbjct: 334 ESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG 393
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI---------DGLCKT------------ 381
+ +EA + +E+ PN +LI DG KT
Sbjct: 394 WGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS 453
Query: 382 ---GKVSNAWELLDEMHV-----RGQPADII-----TYNSFLDALCKGHHVDKGIALI-- 426
G + A+E + ++ V +G + I +++S + A K VD + L+
Sbjct: 454 SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
KK D + + Y++L+ + G++ DA +++ + +N +TMI+
Sbjct: 514 KKWRDSAFESHL--YHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVM 571
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
G F EA L ++ +G + D I F ++ + G ++A +L M
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/518 (20%), Positives = 200/518 (38%), Gaps = 65/518 (12%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
FN V+ + K + A M G+ PN T+ +L+ + A +++
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR 272
Query: 116 KRG-----YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG-FQLDQVTYATLINGLC 169
K G + IT T ++ L+ K + D++ Q +L + ++N
Sbjct: 273 KFGIVCESAYSSMITIYTRLR---LYDKAEEVI----DLMKQDRVRLKLENWLVMLNAYS 325
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
+ G+ E A +L +E G P ++ YNT+I K+ + A L+ + G+ P+
Sbjct: 326 QQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDET 385
Query: 230 TYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM 289
+Y ++I G+ ++A E+ P+ L++ K G A + M
Sbjct: 386 SYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Query: 290 IKQGVKPDVVTYSS----LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
G + YSS ++ Y V +++ V + N S++ ++ K
Sbjct: 446 TGIGCQ-----YSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVK 500
Query: 346 IKMVDEALNLLEEMDYE--------------------------KIIPNKVTY-------- 371
MVD+ L LL E + KI +K+
Sbjct: 501 HGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHI 560
Query: 372 -SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
S++ID G+ S A +L + G D I ++ + K +++ +++ +I+
Sbjct: 561 TSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL-EIM 619
Query: 431 D--KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
D K I PD+ + +L KC Q ++ + K G + N YN +IN +
Sbjct: 620 DEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALP 679
Query: 489 FDEALTLMSKMEDNGCIHDPITFETII-----SALFEK 521
DE +M G + +TF ++ + LF+K
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKK 717
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D+ F M++ TP + FN +L K K + L + G+ + ++ N
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNT 738
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
+I + T+ S + N+ G+ +NTL+ ++ + +
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D TY +IN + G + ++L+ ++ G+ P + YNT+I + +V A
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAV 858
Query: 214 DLYSEMIAKGISPNVVTYSALI 235
L EM + I P+ VTY+ L+
Sbjct: 859 GLVKEMRGRNIIPDKVTYTNLV 880
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 197/466 (42%), Gaps = 43/466 (9%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
+ +N ++ L+K + + +M + G++PN T+N + C G A +
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
+ + G+ P +++N LI LC + + +A + +G L T++TL N LC G
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
+ + A EL+ R + P + II +LC V V A + G+ + ++
Sbjct: 477 KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFT 536
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDP------------------------------- 261
+LIYG + + A L+ M K P
Sbjct: 537 SLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQL 596
Query: 262 -----DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK 316
V YN+ ++ G GK + A+ + +M + G+ P V + ++ Y ++
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 317 ARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID 376
A F+ + +G T + Y +MI GLCK +D+A++ LEEM E + P+ Y I
Sbjct: 657 ALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQ 715
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
LC K A L++E G+ N L K V + ++ I DK P
Sbjct: 716 KLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--IP 773
Query: 437 DMCTYNILLDGLCKCGRIKDAQEV--FQDLFKKGYNLNNWTYNTMI 480
+M + L+ GL GRI E+ ++ +K Y L+ +TYN ++
Sbjct: 774 EMKSLGELI-GLFS-GRIDMEVELKRLDEVIEKCYPLDMYTYNMLL 817
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 214/516 (41%), Gaps = 39/516 (7%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
++ +L +LV+ K + + + Q+ + G VT +IL+ C G+ A L +L
Sbjct: 220 YHVLLNALVEEKCFDSFDVIFDQISVRGFVCA-VTHSILVKKFCKQGKLDEAEDYLRALL 278
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
L+ LC K A + D++ G Y I L K G
Sbjct: 279 PNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLN 338
Query: 176 AALELLRRIEG-RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
+ L++I G + V YN+++ L K + +D+ +EM+ +G+SPN T +A
Sbjct: 339 NPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAA 398
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ FC G + +A+ L P ++YN L+ L V +A ++L I +G
Sbjct: 399 LCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGH 458
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
T+S+L + C + + AR++ A A R + P + +I LC + V++AL
Sbjct: 459 FLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALM 518
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
+ E + + + ++SLI G + A +L+ M +G Y + + +C
Sbjct: 519 INELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVC 578
Query: 415 KGHHVDK----------------------------GIA-------LIKKIIDK-GIQPDM 438
+ +K G A L+ ++D+ GI P +
Sbjct: 579 EMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTV 638
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
+ ++L K +I DA F DL ++G Y MI GLCK D+A+ + +
Sbjct: 639 ASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEE 697
Query: 499 MEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
M+ G +E I L + + D+A L+ E
Sbjct: 698 MKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEF 733
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 174/409 (42%), Gaps = 4/409 (0%)
Query: 127 NTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEG 186
+ L+ G + G+ ALQ ++ +G LD Y L+N L + ++ + +I
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISV 245
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
RG V ++ ++ CK + A D ++ + L+ C + ++
Sbjct: 246 RGF-VCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQE 304
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA-VMIKQGVKPDVVTYSSLM 305
A LLDE+ L YNI + AL K G + + L + +G + +V Y+S++
Sbjct: 305 ATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMV 364
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
N ++ D+ M RGV+PN ++ N + CK VDEAL L
Sbjct: 365 FQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFA 424
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
P ++Y+ LI LC V A+++L RG T+++ +ALC D L
Sbjct: 425 PTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL 484
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+ ++ + P ++ LC G+++DA + + K G + + + ++I G
Sbjct: 485 VIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSIT 544
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISAL--FEKGENDKAEKLLR 532
D A L+ +M++ G + +I + E GE + LL+
Sbjct: 545 LMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLK 593
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 164/355 (46%), Gaps = 3/355 (0%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA-KGISPNVVTYSALIYGFCIVGQLKQ 246
G T ++ I L KLV+ D + + ++ AL+ G+ + G+
Sbjct: 141 GFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDI 200
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
A+ M + +D D Y++L++AL +E K ++ +++ I VT+S L+
Sbjct: 201 ALQHFGNMRFRGLDLDSFGYHVLLNALVEE-KCFDSFDVIFDQISVRGFVCAVTHSILVK 259
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
+C ++++A D A+ I++ LC + EA LL+E+ +
Sbjct: 260 KFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVN 319
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMH-VRGQPADIITYNSFLDALCKGHHVDKGIAL 425
Y+ I L K G ++N + L ++ + G ++ YNS + L K +++D +
Sbjct: 320 MDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDI 379
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+ +++ +G+ P+ T N L CK G + +A E+++ + G+ +YN +I+ LC
Sbjct: 380 LTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCA 439
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
++A ++ D G TF T+ +AL KG+ D A +L+ RDLL
Sbjct: 440 NESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLL 494
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 190/480 (39%), Gaps = 38/480 (7%)
Query: 59 VLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK-R 117
++ +L + + A L ++++ G NI I G + L I
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G + +N+++ L L +++ +G ++ T + CK G + A
Sbjct: 352 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 411
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
LEL R G PT + YN +I +LC + V A+D+ I +G T+S L
Sbjct: 412 LELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNA 471
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
C G+ A L+ +++ P + ++ AL GKV +A + + K GV
Sbjct: 472 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTS 531
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD------- 350
++SL+ G + + A + M +G TP Y +I +C+++ +
Sbjct: 532 FKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTL 591
Query: 351 ------------EALNLLEE-----------------MDYEKIIPNKVTYSSLIDGLCKT 381
+A NL E MD + I P + ++ K
Sbjct: 592 LKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKN 651
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
K+++A ++ +G+ + Y + LCK + +D + ++++ +G+QP + Y
Sbjct: 652 EKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECY 710
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
+ + LC + +A + + K G + + N +++ K EA T M +ED
Sbjct: 711 EVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIED 770
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 108/248 (43%), Gaps = 12/248 (4%)
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
N+ I + G+ A V + + G P + +++ + K+ AL F D+
Sbjct: 607 NLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLRE 666
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
QG + + Y +I GLCK + + A+ L ++G G++P++ Y I LC +
Sbjct: 667 QG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDE 725
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNID---PDVVTYN 267
A L +E G + L++ ++ G+ + ++NI+ P++ +
Sbjct: 726 AVGLVNEFRKSGRRITAFIGNVLLH------NAMKSKGVYEAWTRMRNIEDKIPEMKSLG 779
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
L+ + L +I++ D+ TY+ L+ ++N+ A ++ +ARR
Sbjct: 780 ELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLR-MIVMNQAEDAYEMVERIARR 838
Query: 328 GVTPNVQS 335
G PN ++
Sbjct: 839 GYVPNERT 846
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 138/267 (51%), Gaps = 1/267 (0%)
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
A +IN ++G E A ++ + R K T + +N ++++ K ++ E+
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 222 K-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
K I P+V +Y+ LI G C G +A+ L+DE+ K + PD +T+NIL+ +GK
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
E + + A M+++ VK D+ +Y++ + G + N+ + +F+ + + P+V ++ MI
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
G +DEA+ +E++ P K ++SL+ +CK G + +A+EL E+ +
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Query: 401 ADIITYNSFLDALCKGHHVDKGIALIK 427
D +DAL KG D+ +++
Sbjct: 350 VDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 7/261 (2%)
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
E +N M K+G + +++ Y V A+ VF+ M R S+N ++
Sbjct: 95 EEQNKYPNMSKEGF------VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALL 148
Query: 341 YGLCKIKMVDEALNLLEEMDYE-KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
K D + +E+ + I P+ +Y++LI GLC G + A L+DE+ +G
Sbjct: 149 NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL 208
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
D IT+N L ++G + ++++K ++ D+ +YN L GL + ++
Sbjct: 209 KPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS 268
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+F L + +T+ MI G EG DEA+T ++E NGC F +++ A+
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 520 EKGENDKAEKLLREMIARDLL 540
+ G+ + A +L +E+ A+ LL
Sbjct: 329 KAGDLESAYELCKEIFAKRLL 349
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 143/320 (44%), Gaps = 1/320 (0%)
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
+F A+ F+ + Y + L + E E+L II+
Sbjct: 57 KFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLY 116
Query: 204 CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPD 262
+V + +A ++ EM + ++++AL+ + G+ E+ K +I+PD
Sbjct: 117 GRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPD 176
Query: 263 VVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
V +YN L+ L +G EA ++ + +G+KPD +T++ L+ + + ++
Sbjct: 177 VASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWA 236
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
M + V +++SYN + GL +E ++L +++ ++ P+ T++++I G G
Sbjct: 237 RMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEG 296
Query: 383 KVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYN 442
K+ A E+ G +NS L A+CK ++ L K+I K + D
Sbjct: 297 KLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQ 356
Query: 443 ILLDGLCKCGRIKDAQEVFQ 462
++D L K + +A+E+ +
Sbjct: 357 EVVDALVKGSKQDEAEEIVE 376
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 165/355 (46%), Gaps = 12/355 (3%)
Query: 190 KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIG 249
KP+++ T+++ K ++ F + A+ N+ Y + + +
Sbjct: 38 KPSLI---TLVNDERDPKFITEKFKKACQ--AEWFRKNIAVYERTVRRLAAAKKFEWVEE 92
Query: 250 LLDEMVLKNIDPDVVTYNI---LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
+L+E +N P++ +++ G+ G A+ + M ++ K +++++L++
Sbjct: 93 ILEE---QNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLN 149
Query: 307 GYCLVNEVNKARDVFNAM-ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+ + +F + + + P+V SYN +I GLC EA+ L++E++ + +
Sbjct: 150 ACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLK 209
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
P+ +T++ L+ GK ++ M + DI +YN+ L L + ++ ++L
Sbjct: 210 PDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSL 269
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
K+ ++PD+ T+ ++ G G++ +A ++++ K G + +N+++ +CK
Sbjct: 270 FDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICK 329
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
G + A L ++ + D + ++ AL + + D+AE+++ D L
Sbjct: 330 AGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYL 384
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPNFVTLNILINCHC 99
F+ M + + FN +L + V +K + + +++ I P+ + N LI C
Sbjct: 129 FDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLC 188
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G T A +++ I +G PD ITFN L+ GK Q ++ + + D
Sbjct: 189 GKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR 248
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+Y + GL ++E + L +++G +KP V + +I + A Y E+
Sbjct: 249 SYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEI 308
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
G P +++L+ C G L+ A L E+ K + D +VDAL K K
Sbjct: 309 EKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQ 368
Query: 280 REAKNML 286
EA+ ++
Sbjct: 369 DEAEEIV 375
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 89 VTLNILINCHCYLGQTTSAFSVLANILKR-----GYHPDTITFNTLIKGLCLHGKLHRAL 143
++ N L+N C + F ++ I K PD ++NTLIKGLC G A+
Sbjct: 142 LSFNALLNA-CV---NSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAV 197
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
D++ +G + D +T+ L++ G+ E ++ R+ + +K + YN + L
Sbjct: 198 ALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGL 257
Query: 204 CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDV 263
L+ ++ + P+V T++A+I GF G+L +AI E+ P
Sbjct: 258 AMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLK 317
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
+N L+ A+ K G + A + + + + D ++D ++ ++A ++
Sbjct: 318 FVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 204/428 (47%), Gaps = 37/428 (8%)
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
D+ ++NT+I G + ++ AL + + + + V+++ +I G C+ G+ ++A+ L
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLF 190
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
R++ + P + +I + ++ + Y +++ G V Y+ LI G+
Sbjct: 191 RKMPVKDSSPLCALVAGLIKNE-RLSEAAWVLGQYGSLVS-GREDLVYAYNTLIVGYGQR 248
Query: 242 GQLKQAIGLLDEM-----------VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
GQ++ A L D++ + +VV++N ++ A K G V A+ ++
Sbjct: 249 GQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSAR----LLF 304
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
Q D +++++++DGY V+ + A +F+ M R + S+N+M+ G + V+
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVE 360
Query: 351 EALNLLEEMDYEKIIPNK--VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
A + E+ P K V+++S+I K A +L M++ G+ D T S
Sbjct: 361 LARHYFEK------TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 409 FLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
L A ++ G+ + +I+ K + PD+ +N L+ +CG I +++ +F ++ K
Sbjct: 415 LLSASTGLVNLRLGMQM-HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR 473
Query: 469 YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
+ T+N MI G G EAL L M+ NG ITF ++++A G D+A+
Sbjct: 474 EVI---TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 529 KLLREMIA 536
M++
Sbjct: 531 AQFVSMMS 538
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 205/463 (44%), Gaps = 48/463 (10%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+N +++ K + A+ L +M N V+ + +I C G+ SA + +
Sbjct: 139 WNTMISGYAKNRRIGEALLLFEKMP----ERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQF--HDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ D+ L+ GL + +L A L G + Y TLI G + GQ
Sbjct: 195 VK----DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ 250
Query: 174 TEAALELLRRI-------EGRGIKP----TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
EAA L +I G + VV +N++I + KV V A L+ +M +
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
+ ++++ +I G+ V +++ A L EM + D ++N++V G V A
Sbjct: 311 ----DTISWNTMIDGYVHVSRMEDAFALFSEMP----NRDAHSWNMMVSGYASVGNVELA 362
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY- 341
++ ++ + V+++S++ Y + +A D+F M G P+ + ++
Sbjct: 363 RHYF----EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Query: 342 --GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
GL +++ + + ++ + +IP+ +++LI + G++ + + DEM ++
Sbjct: 419 STGLVNLRLGMQ----MHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK-- 472
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
++IT+N+ + + + + L + GI P T+ +L+ G + +A+
Sbjct: 473 -REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 460 VF---QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
F ++K + + Y++++N +G F+EA+ +++ M
Sbjct: 532 QFVSMMSVYKIEPQMEH--YSSLVNVTSGQGQFEEAMYIITSM 572
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 134/282 (47%), Gaps = 36/282 (12%)
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
+ G + EA+++ + + + VT+++++ GY E+N+AR +F+ M +R +V
Sbjct: 52 RSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVV 103
Query: 335 SYNIMIYGLCK---IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
++N MI G I+ ++EA L +EM + +++++I G K ++ A L
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLF 159
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
++M R + +++++ + C+ VD + L +K+ K P +C L+ GL K
Sbjct: 160 EKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-LCA---LVAGLIKN 211
Query: 452 GRIKDAQEVFQDL--FKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-----EDNGC 504
R+ +A V G + YNT+I G + G + A L ++ +D+G
Sbjct: 212 ERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGG 271
Query: 505 ------IHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ +++ ++I A + G+ A L +M RD +
Sbjct: 272 EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 135/325 (41%), Gaps = 48/325 (14%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
+ +N ++ + K K Y A+ L +M I G P+ TL L+ SA + L N
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL----------SASTGLVN 424
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
L+ G I T+I + +H LI + G+
Sbjct: 425 -LRLGMQMHQIVVKTVIPDVPVHN-------------------------ALITMYSRCGE 458
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
+E R + +K V+ +N +I S A +L+ M + GI P+ +T+ +
Sbjct: 459 I---MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVS 515
Query: 234 LIYGFCIVGQLKQAIG-LLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
++ G + +A + M + I+P + Y+ LV+ +G+ EA + ++
Sbjct: 516 VLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEA---MYIITSM 572
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL-CKIKMVDE 351
+PD + +L+D + N V A AM+R + P + +++Y + + + DE
Sbjct: 573 PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSR--LEPESSTPYVLLYNMYADMGLWDE 630
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLID 376
A + M+ ++I K SS +D
Sbjct: 631 ASQVRMNMESKRI--KKERGSSWVD 653
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 166/344 (48%), Gaps = 6/344 (1%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY L L Q + A L + G+KPT+ +Y ++I K +L+ AF M
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205
Query: 220 IAKGIS---PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
K +S P+V T++ LI C +G+ ++ EM + VTYN ++D GK
Sbjct: 206 --KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKA 263
Query: 277 GKVREAKNMLAVMIKQGVK-PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
G E +++LA MI+ G PDV T +S++ Y + K ++ GV P++ +
Sbjct: 264 GMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITT 323
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
+NI+I K M + ++++ M+ VTY+ +I+ K G++ ++ +M
Sbjct: 324 FNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMK 383
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
+G + ITY S ++A K V K +++++I++ + D +N +++ + G +
Sbjct: 384 YQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLA 443
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
+E++ + ++ + T+ TMI G+FD L +M
Sbjct: 444 TMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 2/283 (0%)
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
+P TY L LG + +A + VM+ +G+KP + Y+SL+ Y ++KA
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 320 VFNAMAR-RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
M P+V ++ ++I CK+ D +++ EM Y + + VTY+++IDG
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 379 CKTGKVSNAWELLDEMHVRGQP-ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
K G +L +M G D+ T NS + + G ++ K + + G+QPD
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
+ T+NIL+ K G K V + K+ ++L TYN +I K G ++ +
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
KM+ G + IT+ ++++A + G K + +LR+++ D++
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 127/260 (48%), Gaps = 3/260 (1%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + F +++ K + S+ +M G+ + VT N +I+ + G SV
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 111 LANILKRGYH-PDTITFNTLIKGLCLHGKLHRALQ-FHDDVLAQGFQLDQVTYATLINGL 168
LA++++ G PD T N++I G +G+ R ++ ++ G Q D T+ LI
Sbjct: 273 LADMIEDGDSLPDVCTLNSII-GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 331
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNV 228
K G + ++ +E R T V YN +I++ K + D++ +M +G+ PN
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 391
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAV 288
+TY +L+ + G + + +L ++V ++ D +N +++A G+ G + K +
Sbjct: 392 ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 451
Query: 289 MIKQGVKPDVVTYSSLMDGY 308
M ++ KPD +T+++++ Y
Sbjct: 452 MEERKCKPDKITFATMIKTY 471
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 140/327 (42%), Gaps = 2/327 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQME-ITGITPNFVTLNI 93
D F ML + P I + +++ K++ A S M+ ++ P+ T +
Sbjct: 161 DQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTV 220
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+C C LG+ S++ + G T+T+NT+I G G D++ G
Sbjct: 221 LISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
Query: 154 FQLDQVTYATLINGLCKMGQTEAALE-LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
L V I G G+ +E R + G++P + +N +I S K +
Sbjct: 281 DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKM 340
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ M + S VTY+ +I F G++++ + +M + + P+ +TY LV+A
Sbjct: 341 CSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNA 400
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
K G V + ++L ++ V D ++ +++ Y ++ ++++ M R P+
Sbjct: 401 YSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPD 460
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEM 359
++ MI + D L ++M
Sbjct: 461 KITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 92/209 (44%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P + N ++ S ++ S + ++ G+ P+ T NILI G SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ + KR + T+T+N +I+ G++ + + QG + + +TY +L+N K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G +LR+I + +N II++ + ++ +LY +M + P+ +T
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
++ +I + G L +M+ +I
Sbjct: 464 FATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 85/209 (40%)
Query: 86 PNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
P+ TLN +I + S + G PD TFN LI G +
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
D + + F L VTY +I K G+ E ++ R+++ +G+KP + Y +++++ K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVT 265
LV + +++ + + ++ +I + G L L +M + PD +T
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 266 YNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ ++ G + + MI +
Sbjct: 464 FATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ S+++R M + P I FN ++ S K Y S+ ME + VT N
Sbjct: 301 NMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYN 360
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
I+I G+ V + +G P++IT+ +L+ G + + ++
Sbjct: 361 IVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNS 420
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
LD + +IN + G EL ++E R KP + + T+I + +
Sbjct: 421 DVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAV 480
Query: 213 FDLYSEMIAKGISPNVVT 230
+L +MI+ I +T
Sbjct: 481 QELEKQMISSDIGKKRLT 498
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 156/340 (45%), Gaps = 1/340 (0%)
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
+TI +N +K L + + +++ G +LD +TY+T+I + A+E
Sbjct: 185 ETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
R+ G+ P V Y+ I+D K V LY +A G P+ + +S L F
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
G +L EM ++ P+VV YN L++A+G+ GK A+++ M++ G+ P+ T
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTL 364
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
++L+ Y A ++ M + + YN ++ I + +EA L +M
Sbjct: 365 TALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKE 424
Query: 362 E-KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ P+ +Y+++++ GK A EL +EM G +++ + L K +D
Sbjct: 425 SVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRID 484
Query: 421 KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ + I +G++PD LL + C +DA++V
Sbjct: 485 DVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 147/296 (49%), Gaps = 7/296 (2%)
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
E ALE+++ G++ + Y+TII + L + A + + M G+ P+ VTYSA+
Sbjct: 207 EMALEMVKD----GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAI 262
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ + G++++ + L + V PD + +++L G+ G + +L M V
Sbjct: 263 LDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDV 322
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
KP+VV Y++L++ + AR +FN M G+TPN ++ ++ K + +AL
Sbjct: 323 KPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQ 382
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH--VRGQPADIITYNSFLDA 412
L EEM +K + + Y++L++ G A L ++M V+ +P D +Y + L+
Sbjct: 383 LWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRP-DNFSYTAMLNI 441
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
G +K + L ++++ G+Q ++ L+ L K RI D VF K+G
Sbjct: 442 YGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 154/320 (48%), Gaps = 4/320 (1%)
Query: 37 TVSFFNRMLQMRITP-PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
T +FFN + + P I +N + SL + + ++ +M G+ + +T + +I
Sbjct: 169 THTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTII 228
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
C A + K G PD +T++ ++ GK+ L ++ +A G++
Sbjct: 229 TCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWK 288
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D + ++ L + G + +L+ ++ +KP VV+YNT+++++ + A L
Sbjct: 289 PDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSL 348
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
++EM+ G++PN T +AL+ + + A+ L +EM K D + YN L++
Sbjct: 349 FNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCAD 408
Query: 276 EGKVREAKNMLAVMIKQGV--KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
G EA+ + M K+ V +PD +Y+++++ Y + KA ++F M + GV NV
Sbjct: 409 IGLEEEAERLFNDM-KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 467
Query: 334 QSYNIMIYGLCKIKMVDEAL 353
++ L K K +D+ +
Sbjct: 468 MGCTCLVQCLGKAKRIDDVV 487
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 3/282 (1%)
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
+ YN + SL + ++ EM+ G+ + +TYS +I +AI +
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
M + PD VTY+ ++D K GKV E ++ + G KPD + +S L +
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
+ + R V M V PNV YN ++ + + A +L EM + PN+ T +
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+L+ K +A +L +EM + P D I YN+ L+ +C +++ + + +
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKE 424
Query: 433 GIQ--PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
+Q PD +Y +L+ G+ + A E+F+++ K G +N
Sbjct: 425 SVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 135/275 (49%), Gaps = 1/275 (0%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
+ + YN+ + +L + + + M M+K GV+ D +TYS+++ N NKA + F
Sbjct: 185 ETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
M + G+ P+ +Y+ ++ K V+E L+L E P+ + +S L +
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G +L EM +++ YN+ L+A+ + +L ++++ G+ P+ T
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTL 364
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
L+ K +DA ++++++ K + ++ YNT++N GL +EA L + M++
Sbjct: 365 TALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKE 424
Query: 502 N-GCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+ C D ++ +++ G+ +KA +L EM+
Sbjct: 425 SVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 1/293 (0%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+ + +F RM + + P + ++ +L K+ +SL + TG P+ + ++L
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
G VL + P+ + +NTL++ + GK A +++L G
Sbjct: 298 GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
++ T L+ K AL+L ++ + ++YNT+++ + L A
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAER 417
Query: 215 LYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
L+++M P+ +Y+A++ + G+ ++A+ L +EM+ + +V+ LV L
Sbjct: 418 LFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
GK ++ + + + IK+GVKPD L+ L A V + R
Sbjct: 478 GKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 530
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V++ +S + R + P I F+ + + Y + ++M+ + PN V N
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA---LQFHDDVL 150
L+ G+ A S+ +L+ G P+ T L+K ++GK A LQ +++
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVK---IYGKARWARDALQLWEEMK 388
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNTIIDSLCKVKLV 209
A+ + +D + Y TL+N +G E A L + E +P Y +++
Sbjct: 389 AKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKA 448
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
A +L+ EM+ G+ NV+ + L+ ++ + + D + + + PD L
Sbjct: 449 EKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCL 508
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+ + +A+ ++A + + K +VT+ +L+
Sbjct: 509 LSVMALCESSEDAEKVMACLERANKK--LVTFVNLI 542
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 44/264 (16%)
Query: 311 VNEVNKARDVFNAMARRGVTP-NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP--- 366
+ E K FN + + + P YN+ + L L+EEM E +
Sbjct: 163 LREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSL----RFGRQFQLIEEMALEMVKDGVE 218
Query: 367 -NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
+ +TYS++I + + A E + M+ G D +TY++ LD K V++ ++L
Sbjct: 219 LDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSL 278
Query: 426 IKKIIDKGIQPD-----------------------------------MCTYNILLDGLCK 450
++ + G +PD + YN LL+ + +
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR 338
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
G+ A+ +F ++ + G N T ++ K +AL L +M+ D I
Sbjct: 339 AGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL 398
Query: 511 FETIISALFEKGENDKAEKLLREM 534
+ T+++ + G ++AE+L +M
Sbjct: 399 YNTLLNMCADIGLEEEAERLFNDM 422
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%)
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
P + I YN + +L G + +++ G++ D TY+ ++ +C A E
Sbjct: 183 PMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIE 242
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
F+ ++K G + TY+ +++ K G +E L+L + G D I F +
Sbjct: 243 WFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFG 302
Query: 520 EKGENDKAEKLLREMIARDL 539
E G+ D +L+EM + D+
Sbjct: 303 EAGDYDGIRYVLQEMKSMDV 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 380 KTGKVSNAWELLDEMHVR----GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
K+ + ++L++EM + G D ITY++ + + + +K I +++ G+
Sbjct: 194 KSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLM 253
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
PD TY+ +LD K G++++ +++ G+ + ++ + + G +D +
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYV 313
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ +M+ + + + T++ A+ G+ A L EM+ L
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 167/365 (45%), Gaps = 17/365 (4%)
Query: 89 VTLNILINCHCYLGQTTSAFSVLANILKR-GYHPDTITFNTLIKGLCLHGKLHRALQFHD 147
VTLN + N +A VL N+L+ + I +N +K L ++ + D
Sbjct: 147 VTLNNMTN-------PETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFD 199
Query: 148 DVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVK 207
++L +G + D T+ T+I+ + G + A+E ++ G +P V +ID+ +
Sbjct: 200 EMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAG 259
Query: 208 LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYN 267
V A LY + + VT+S LI + + G + + +EM + P++V YN
Sbjct: 260 NVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
L+D++G+ + +AK + +I G P+ TY++L+ Y + A ++ M +
Sbjct: 320 RLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK 379
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSLIDGLCKTGKVSN 386
G++ V YN ++ + VDEA + ++M + E P+ T+SSLI +G+VS
Sbjct: 380 GLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSE 439
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
A L +M G + S + K VD + ++++ GI PD D
Sbjct: 440 AEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD--------D 491
Query: 447 GLCKC 451
C C
Sbjct: 492 RFCGC 496
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 1/327 (0%)
Query: 42 NRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYL 101
N + M+ + +I +N + K+K + L +M GI P+ T +I+C
Sbjct: 164 NLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQN 223
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTY 161
G A + G PD +T +I G + AL +D + +++D VT+
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 162 ATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA 221
+TLI G + L + ++ G+KP +V+YN +IDS+ + K A +Y ++I
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 222 KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
G +PN TY+AL+ + A+ + EM K + V+ YN L+ V E
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Query: 282 AKNMLAVMIK-QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI 340
A + M + PD T+SSL+ Y V++A M G P + +I
Sbjct: 404 AFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVI 463
Query: 341 YGLCKIKMVDEALNLLEEMDYEKIIPN 367
K K VD+ + +++ I P+
Sbjct: 464 QCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 151/326 (46%), Gaps = 10/326 (3%)
Query: 189 IKPT--VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
+KP+ V++YN + K K + + L+ EM+ +GI P+ T++ +I G K+
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 247 AIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
A+ ++M +PD VT ++DA G+ G V A ++ + + D VT+S+L+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
Y + + +++ M GV PN+ YN +I + + K +A + +++ P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
N TY++L+ + +A + EM +G +I YN+ L +VD+ +
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 427 KKIID-KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN--GL 483
+ + + + PD T++ L+ GR+ +A+ + + G+ + ++I G
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGK 468
Query: 484 CKE-----GLFDEALTLMSKMEDNGC 504
K+ FD+ L L +D C
Sbjct: 469 AKQVDDVVRTFDQVLELGITPDDRFC 494
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 255 VLKNIDP--DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
+L+ + P +V+ YN+ + K + +++ + M+++G+KPD T+++++
Sbjct: 165 LLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNG 224
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
+A + F M+ G P+ + MI + VD AL+L + EK + VT+S
Sbjct: 225 VPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFS 284
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+LI +G + +EM G +++ YN +D++ + + + K +I
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
G P+ TY L+ + DA +++++ +KG +L YNT+++ DEA
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 493 LTLMSKMED-NGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+ M++ C D TF ++I+ G +AE L +M
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQM 447
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 134/301 (44%), Gaps = 1/301 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+++ + F+ ML+ I P F +++ + A+ +M G P+ VT+
Sbjct: 190 DLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMA 249
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I+ + G A S+ + D +TF+TLI+ + G L ++++ A
Sbjct: 250 AMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL 309
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + + V Y LI+ + + + A + + + G P Y ++ + + + A
Sbjct: 310 GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVD 271
+Y EM KG+S V+ Y+ L+ + +A + +M + DPD T++ L+
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLIT 429
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
G+V EA+ L M + G +P + +S++ Y +V+ F+ + G+TP
Sbjct: 430 VYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Query: 332 N 332
+
Sbjct: 490 D 490
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
++I YN + K ++K L +++++GI+PD T+ ++ + G K A E F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
+ + G +N T MI+ + G D AL+L + D +TF T+I
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 522 GENDKAEKLLREMIA 536
G D + EM A
Sbjct: 294 GNYDGCLNIYEEMKA 308
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 225/503 (44%), Gaps = 50/503 (9%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
++ + F RM + + +N +++ ++ + A L +M + V+ N++
Sbjct: 81 NEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVSWNVM 132
Query: 95 INCHCY---LGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
I + LG+ F ++ D ++NT++ G +G + A D +
Sbjct: 133 IKGYVRNRNLGKARELFEIMP-------ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+ + V++ L++ + + E A L + E + V +N ++ K K +
Sbjct: 186 K----NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVE 237
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A + M + +VV+++ +I G+ G++ +A L DE ++ DV T+ +V
Sbjct: 238 ARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVS 289
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
+ V EA+ + M ++ + V++++++ GY + A+++F+ M R
Sbjct: 290 GYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR---- 341
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
NV ++N MI G + + EA NL ++M + V+++++I G ++G A L
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+M G + +++S L ++ G L +++ G + N LL CKC
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
G I++A ++F+++ G ++ +W NTMI G + G + AL M+ G D T
Sbjct: 458 GSIEEANDLFKEM--AGKDIVSW--NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 512 ETIISALFEKGENDKAEKLLREM 534
++SA G DK + M
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTM 536
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
T+NT+I G GK+ A D + + D V++A +I G + G + AL L ++
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
E G + +++ + + V + L+ ++ G +AL+ +C G +
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
++A L EM K D+V++N ++ + G A M ++G+KPD T ++
Sbjct: 461 EEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 305 MDGYCLVNEVNKARDVFNAMARR-GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
+ V+K R F M + GV PN Q Y M+ L + ++++A NL++ M +E
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE- 575
Query: 364 IIPNKVTYSSLI 375
P+ + +L+
Sbjct: 576 --PDAAIWGTLL 585
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 32/286 (11%)
Query: 255 VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEV 314
+LK D D+ +N+ + + + G+ EA + M + V+Y+ ++ GY E
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEF 111
Query: 315 NKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK--VTYS 372
AR +F+ M R ++ S+N+MI G + + + +A L E I+P + +++
Sbjct: 112 ELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFE------IMPERDVCSWN 161
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
+++ G + G V +A + D M + +++N+ L A + +++ L K +
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMPEKND----VSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
+ ++N LL G K +I +A++ F + + ++ +W NT+I G + G DEA
Sbjct: 218 AL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR--DVVSW--NTIITGYAQSGKIDEA 269
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
L D + D T+ ++S + ++A +L +M R+
Sbjct: 270 RQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+++ +N+ I + +EAL + + M + V+Y+ +I G + G+ A +L
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARKLF 118
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
DEM R D++++N + KG+ ++ + +++ + + D+C++N +L G +
Sbjct: 119 DEMPER----DLVSWN----VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 452 GRIKDAQEVFQDLFKK---GYNL---------------------NNW---TYNTMINGLC 484
G + DA+ VF + +K +N NW ++N ++ G
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
K+ EA M + D +++ TII+ + G+ D+A +L E +D+
Sbjct: 231 KKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 10/285 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEF-NKVLTSLVKTKHYSTAISLSRQMEITGITPNF--- 88
N+ D S FN + P ++F N VL S + + L + I PNF
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQH--ILKSQPNFRPG 121
Query: 89 -VTLNILINCHCYLGQTT--SAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
T IL++ C ++ + VL ++ G PD +T + ++ LC G++ A
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNTIIDSLC 204
++ + D TY L+ LCK E + + + +KP +V + +ID++C
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
K + A L S++ G P+ Y+ ++ GFC + + +A+G+ +M + ++PD +
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC 309
TYN L+ L K G+V EA+ L M+ G +PD TY+SLM+G C
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 145/286 (50%), Gaps = 8/286 (2%)
Query: 209 VSHAFDLYSEMIAKGISP-NVVTYSALIYGFCIVGQLKQAIGLLDEMVLK---NIDPDVV 264
+S A L++ + A P ++ +++++ + + + + L + +LK N P
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLF-QHILKSQPNFRPGRS 123
Query: 265 TYNILVD--ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFN 322
T+ IL+ + + +L +M+ G++PD VT + C V++A+D+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSLIDGLCKT 381
+ + P+ +YN ++ LCK K + ++EM D + P+ V+++ LID +C +
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
+ A L+ ++ G D YN+ + C + + + KK+ ++G++PD TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
N L+ GL K GR+++A+ + + GY + TY +++NG+C++G
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 122/232 (52%), Gaps = 3/232 (1%)
Query: 154 FQLDQVTYATLINGLCKMGQTEAA--LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
F+ + T+ L++ C+ + + +L + G++P V + + SLC+ V
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILV 270
A DL E+ K P+ TY+ L+ C L +DEM ++ PD+V++ IL+
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
D + +REA +++ + G KPD Y+++M G+C +++ ++A V+ M GV
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
P+ +YN +I+GL K V+EA L+ M P+ TY+SL++G+C+ G
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 244 LKQAIGLLDEMVLKNIDP-DVVTYNILVDALGKEGKVREAKNMLAVMIKQ--GVKPDVVT 300
L A L + + + P D+ +N ++ + G V + + ++K +P T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 301 YSSLMDGYCLV--NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
+ L+ C + ++ V N M G+ P+ + +I + LC+ VDEA +L++E
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH--VRGQPADIITYNSFLDALCKG 416
+ + P+ TY+ L+ LCK + +E +DEM +P D++++ +D +C
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP-DLVSFTILIDNVCNS 243
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
++ + + L+ K+ + G +PD YN ++ G C + +A V++ + ++G + TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
NT+I GL K G +EA + M D G D T+ ++++ + KG
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 133/274 (48%), Gaps = 20/274 (7%)
Query: 275 KEGKVREAKNMLAVMIKQGVKP-DVVTYSSLMDGYCLVNEVNKARDVFNAM--ARRGVTP 331
K + +AK++ + P D+ ++S++ Y + VN +F + ++ P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 332 NVQSYNIMIYGLCK-----IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
++ I++ C+ I V LNL+ E P++VT + LC+TG+V
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLE---PDQVTTDIAVRSLCETGRVDE 177
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK-----GIQPDMCTY 441
A +L+ E+ + P D TYN L LCK K + ++ + +D+ ++PD+ ++
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKC----KDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
IL+D +C +++A + L G+ + + YNT++ G C EA+ + KM++
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
G D IT+ T+I L + G ++A L+ M+
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 42/250 (16%)
Query: 34 VDDTVSFFNRML--QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEI---TGITPNF 88
V+DTV F +L Q P F +L+ + S + ++ R + + G+ P+
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSIS-NVHRVLNLMVNNGLEPDQ 159
Query: 89 VTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDD 148
VT +I + C G+ A ++ + ++ PDT T+N L+K LC LH +F D+
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 149 VLAQ------------------------------------GFQLDQVTYATLINGLCKMG 172
+ GF+ D Y T++ G C +
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
+ A+ + ++++ G++P + YNT+I L K V A M+ G P+ TY+
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 233 ALIYGFCIVG 242
+L+ G C G
Sbjct: 340 SLMNGMCRKG 349
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 193/440 (43%), Gaps = 32/440 (7%)
Query: 86 PNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
P+ N ++N LG T + + + + PD +T+N +IK G+ +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
+ ++ +G ++ T +L+ G A +++ + + LCK
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR------------RDLCK 341
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ--AIGLLDEMVLKNIDP-- 261
V +A DL + + G+ ++ + + + +++ ++DP
Sbjct: 342 VLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSG 401
Query: 262 -----------DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK---PDVVTYSSLMDG 307
D Y L+ K G+V + ML M +Q + PD VTY++++
Sbjct: 402 EPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSA 461
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK-IIP 366
+ +++AR V MAR GV N +YN+++ G CK +D A +LL EM + I P
Sbjct: 462 FVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEP 521
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
+ V+Y+ +IDG + A +EM RG I+Y + + A +
Sbjct: 522 DVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 427 KKII-DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+++ D ++ D+ +N+L++G C+ G I+DAQ V + + G+ N TY ++ NG+ +
Sbjct: 582 DEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 486 EGLFDEALTLMSKMEDNGCI 505
+AL L ++++ +
Sbjct: 642 ARKPGDALLLWKEIKERCAV 661
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 201/504 (39%), Gaps = 56/504 (11%)
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGK----------- 138
+L +L GQT A SV+ ++++ GY P + + L G
Sbjct: 155 SLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFI 214
Query: 139 --LHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMY 196
R +F D L + D + ++N +G T+ +L + +P V+ Y
Sbjct: 215 AITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTY 274
Query: 197 NTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL 256
N +I +V + +I KGI + T +L+ + G L+ A ++ M
Sbjct: 275 NVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMRE 334
Query: 257 KNID-----------------------------PDVVTYNILVDALGKEGKVREAKNML- 286
K D D + D + +EG V K +L
Sbjct: 335 KRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLP 394
Query: 287 --------AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR---RGVTPNVQS 335
++ + PD Y++LM GY V + AM R R P+ +
Sbjct: 395 NSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVT 454
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM- 394
Y ++ ++D A +L EM + N++TY+ L+ G CK ++ A +LL EM
Sbjct: 455 YTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT 514
Query: 395 HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
G D+++YN +D +A ++ +GI P +Y L+ G+
Sbjct: 515 EDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 455 KDAQEVFQDLFKKGY-NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFET 513
K A VF ++ ++ +N ++ G C+ GL ++A ++S+M++NG + T+ +
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGS 634
Query: 514 IISALFEKGENDKAEKLLREMIAR 537
+ + + + + A L +E+ R
Sbjct: 635 LANGVSQARKPGDALLLWKEIKER 658
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 21/279 (7%)
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
R HPD +T+ T++ G + RA Q ++ G +++TY L+ G CK Q +
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505
Query: 177 ALELLRRI-EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A +LLR + E GI+P VV YN IID + + A ++EM +GI+P ++Y+ L+
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 236 YGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
F + GQ K A + DEM+ + D++ +N+LV+ + G + +A+ +++ M + G
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 295 KPDVVTYSSLMDG-------------------YCLVNEVNKARDVFNAMARRGVTPNVQS 335
P+V TY SL +G C V + D + A + P+
Sbjct: 626 YPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGL 685
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
+ + + +AL ++ M+ I PNK Y +
Sbjct: 686 LDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 30/320 (9%)
Query: 149 VLAQGFQLDQVTYATLINGLCKMGQ---TEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
+L + F D Y TL+ G K G+ T LE +RR + R P V Y T++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 206 VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL-KNIDPDVV 264
L+ A + +EM G+ N +TY+ L+ G+C Q+ +A LL EM I+PDVV
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+YNI++D A M +G+ P ++Y++LM + + + A VF+ M
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 325 ARRGVTPNVQ----SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
P V+ ++N+++ G C++ ++++A ++ M PN TY SL +G+ +
Sbjct: 585 MN---DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 381 TGKVSNAWELLDEMHVR------GQPADIIT-------------YNSFLDALCKGHHVDK 421
K +A L E+ R P+D + ++ D + K
Sbjct: 642 ARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKK 701
Query: 422 GIALIKKIIDKGIQPDMCTY 441
+ +I + + GI P+ Y
Sbjct: 702 ALEIIACMEENGIPPNKTKY 721
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 177/464 (38%), Gaps = 92/464 (19%)
Query: 128 TLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGR 187
+L + + +L Q H +LD + L K GQT A+ +++ +
Sbjct: 131 SLTRAQSILTRLRNERQLH--------RLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRS 182
Query: 188 GIKPTVVMYNTIIDSLC---------KVKL---VSHAFDLYSEMIAKGIS-PNVVTYSAL 234
G P V + + SL +KL ++ + + G S P+ ++A+
Sbjct: 183 GYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAV 242
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ +G + L +EM + +PDV+TYN+++ + G+ +L +I +G+
Sbjct: 243 LNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGI 302
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAM--ARRGVTPNVQSYNIMIYGLCKIKMVD-- 350
K + T SL+ Y ++ A + AM RR + ++ N + + +
Sbjct: 303 KVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDD 362
Query: 351 ---------EALNLLEEMD-------YEKIIPNKVT------------------YSSLID 376
+ +E+ ++K++PN V Y++L+
Sbjct: 363 EDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMK 422
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
G K G+V++ +L+ M ++ D+ P
Sbjct: 423 GYMKNGRVADTARMLEAM--------------------------------RRQDDRNSHP 450
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
D TY ++ G + A++V ++ + G N TYN ++ G CK+ D A L+
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 497 SKM-EDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
+M ED G D +++ II ++ A EM R +
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGI 554
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 198/433 (45%), Gaps = 24/433 (5%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
A V ++ G + T ++ +K G++ FH V+ GF+ + +TL
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM-IAKGIS 225
G ++ RR+ +P V+ + ++ + K L A L+ M KG+
Sbjct: 207 ---LYGVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
P+ T+ ++ + +LKQ + +++ I +VV + L+D GK G VREA+ +
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
M K+ + V++S+L+ GYC E KA ++F M + ++ + ++
Sbjct: 323 FNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAG 374
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
+ V + + N + S+LID K+G + +A + +M +R ++IT
Sbjct: 375 LAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMIT 430
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
+N+ L AL + ++ ++ ++ KGI+PD ++ +L G + + + F L
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFV-LM 489
Query: 466 KKGYNLNNWT--YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
K Y + T Y+ MI+ L + GLF+EA L+ + E C +D + ++ +
Sbjct: 490 AKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE---CRNDASLWGVLLGPCAANAD 546
Query: 524 NDK-AEKLLREMI 535
+ AE++ + M+
Sbjct: 547 ASRVAERIAKRMM 559
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/436 (17%), Positives = 177/436 (40%), Gaps = 76/436 (17%)
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS-- 225
LCK+GQ A+ +L I T +Y +++ + KV H ++ ++ G+
Sbjct: 36 LCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETD 95
Query: 226 ------------------------------PNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
+ +++++++ G+ + +A+ + EMV
Sbjct: 96 RNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV 155
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV--------------------- 294
+D + T + V A + G+VR + V+I G
Sbjct: 156 SFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPV 215
Query: 295 ----------KPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR-RGVTPNVQSYNIMIYGL 343
+PDV+ +++++ + + +A +F AM R +G+ P+ ++ ++
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
++ + + + ++ I N V SSL+D K G V A ++ + M +
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM----SKKNS 331
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
+++++ L C+ +K I + +++ +K D+ + +L ++ +E+
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
++G N + +I+ K G D A + SKM I + IT+ ++SAL + G
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQNGR 443
Query: 524 NDKAEKLLREMIARDL 539
++A +M+ + +
Sbjct: 444 GEEAVSFFNDMVKKGI 459
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 118/220 (53%), Gaps = 6/220 (2%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
GI+P + YN +I C+ S ++ + +EM KGI PN ++ +I GF + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+L M + ++ V TYNI + +L K K +EAK +L M+ G+KP+ VTYS L+ G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
+C ++ +A+ +F M RG P+ + Y +IY LCK + AL+L +E + +P+
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
SL++GL K KV A EL+ GQ + T N
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELI------GQVKEKFTRN 395
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 3/323 (0%)
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
++D++ ++ + L + A LL IE R + I + ++ H+
Sbjct: 77 RIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSL 136
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDA 272
++ ++ IS V + +AL++ + K+A + EM + I+PD+ TYN ++
Sbjct: 137 RVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKV 196
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ G + +++A M ++G+KP+ ++ ++ G+ ++ ++ V M RGV
Sbjct: 197 FCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIG 256
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V +YNI I LCK K EA LL+ M + PN VTYS LI G C A +L
Sbjct: 257 VSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M RG D Y + + LCKG + ++L K+ ++K P L++GL K
Sbjct: 317 IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDS 376
Query: 453 RIKDAQEVFQDLFKK-GYNLNNW 474
++++A+E+ + +K N+ W
Sbjct: 377 KVEEAKELIGQVKEKFTRNVELW 399
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 6/312 (1%)
Query: 194 VMYNTIIDSLCKVK---LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
+ ++ +++L + K VS+ D + E S ++ ++Y L ++ +
Sbjct: 81 IAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYA--QANMLDHSLRV 138
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYSSLMDGYC 309
++ I V + N L+ A +EAK + M K G++PD+ TY+ ++ +C
Sbjct: 139 FRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFC 198
Query: 310 LVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV 369
+ + + M R+G+ PN S+ +MI G DE +L M +
Sbjct: 199 ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS 258
Query: 370 TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKI 429
TY+ I LCK K A LLD M G + +TY+ + C ++ L K +
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM 318
Query: 430 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 489
+++G +PD Y L+ LCK G + A + ++ +K + + +++NGL K+
Sbjct: 319 VNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKV 378
Query: 490 DEALTLMSKMED 501
+EA L+ ++++
Sbjct: 379 EEAKELIGQVKE 390
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 119/225 (52%), Gaps = 2/225 (0%)
Query: 309 CLV-NEVNKARDVFNAMARR-GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
CLV + +A+ V+ M + G+ P++++YN MI C+ + +++ EM+ + I P
Sbjct: 161 CLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKP 220
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
N ++ +I G K ++L M RG + TYN + +LCK + AL+
Sbjct: 221 NSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALL 280
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
++ G++P+ TY+ L+ G C ++A+++F+ + +G ++ Y T+I LCK
Sbjct: 281 DGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKG 340
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
G F+ AL+L + + + +++++ L + + ++A++L+
Sbjct: 341 GDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 37/305 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPNFVTLN 92
+D ++ F + + I+ + N +L + + K Y A + +M ++ GI P+ T N
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 191
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I C G +S++S++A + ++G P++ +F +I G + +D
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGF-----------YAED---- 236
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ D+V ++L ++ RG+ V YN I SLCK K A
Sbjct: 237 --KSDEVG------------------KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L M++ G+ PN VTYS LI+GFC ++A L MV + PD Y L+
Sbjct: 277 KALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYY 336
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
L K G A ++ +++ P SL++G ++V +A+++ + + T N
Sbjct: 337 LCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRN 395
Query: 333 VQSYN 337
V+ +N
Sbjct: 396 VELWN 400
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 12/284 (4%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG---YCLVNEVNKAR 318
D + ++ V+ L ++ N+L I+ +PD+ + Y N ++ +
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIEN--RPDLKSERFAAHAIVLYAQANMLDHSL 136
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSLIDG 377
VF + + ++ V+S N +++ K EA + EM I P+ TY+ +I
Sbjct: 137 RVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKV 196
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYN---SFLDALCKGHHVDKGIALIKKIIDKGI 434
C++G S+++ ++ EM +G + ++ S A K V K +A++K D+G+
Sbjct: 197 FCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMK---DRGV 253
Query: 435 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 494
+ TYNI + LCK + K+A+ + + G N TY+ +I+G C E F+EA
Sbjct: 254 NIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKK 313
Query: 495 LMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
L M + GC D + T+I L + G+ + A L +E + ++
Sbjct: 314 LFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 357
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 211/466 (45%), Gaps = 20/466 (4%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
I + +++SLV + + A+ +M G+ PN T L+ +LG ++ +N
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGK-TIHSN 249
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
I+ RG + + +L+ K+ A++ VL + D + ++++G + +
Sbjct: 250 IIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR----VLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
+ A+ + G++P Y+ I+ V+ + ++S+ I G + +A
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 234 LI--YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
L+ Y C ++ +A + MV P+VV++ L+ L G V++ +L M+K
Sbjct: 366 LVDMYMKCSASEV-EASRVFGAMV----SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
+ V+P+VVT S ++ + V + ++ + RR V + N ++ + VD
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY 480
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A N++ M + +TY+SL+ + GK A +++ M+ G D ++ F+
Sbjct: 481 AWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFIS 536
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL 471
A ++ G L + G N L+D KCG ++DA++VF+++ ++
Sbjct: 537 ASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP--DV 594
Query: 472 NNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
+W N +++GL G AL+ +M D +TF ++SA
Sbjct: 595 VSW--NGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/512 (21%), Positives = 220/512 (42%), Gaps = 58/512 (11%)
Query: 47 MRITPPIIEF---------NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
+ I P+I+F N +L+ +KT A L +M + ++I+
Sbjct: 43 LHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV----FAWTVMISA 98
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
+ SA S+ ++ G HP+ TF+++++ + + H V+ GF+ +
Sbjct: 99 FTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN 158
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
V ++L + K GQ + A EL ++ + + +I SL + A YS
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQ----NADTISWTMMISSLVGARKWREALQFYS 214
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
EM+ G+ PN T+ L+ +G L+ + ++++ I +VV LVD +
Sbjct: 215 EMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
K+ +A +L +Q DV ++S++ G+ +A F M G+ PN +Y+
Sbjct: 274 KMEDAVRVLNSSGEQ----DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYS 329
Query: 338 IMIYGLCKIKMVD------------------EALNLL---------EEMDYEKII----- 365
++ ++ +D + N L E++ ++
Sbjct: 330 AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS 389
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
PN V++++LI GL G V + + LL EM R +++T + L A K HV + + +
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
++ + + +M N L+D ++ A V + + ++ +N TY +++ +
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNE 505
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
G + AL++++ M +G D ++ ISA
Sbjct: 506 LGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 126/308 (40%), Gaps = 47/308 (15%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V D M++ + P ++ + VL + K +H + + + + V N
Sbjct: 408 VQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ + + A++V+ ++ +R D IT+ +L+ GK AL + + G
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
++DQ++ I+ +G E L G + N+++D K + A
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA- 272
++ E+ +P+VV+++ L+ G G + A+ +EM +K +PD VT+ IL+ A
Sbjct: 584 KVFEEIA----TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSAC 639
Query: 273 -----------------------------------LGKEGKVREAKNMLAVMIKQGVKPD 297
LG+ G++ EA ++ M +KP+
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM---HLKPN 696
Query: 298 VVTYSSLM 305
+ + +L+
Sbjct: 697 AMIFKTLL 704
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 8/210 (3%)
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
+C N + + + G+ N+ N ++ K + A L +EM + +
Sbjct: 33 FCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVF-- 90
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
++ +I K+ + ++A L +EM G + T++S + + + G +
Sbjct: 91 --AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
+I G + + + L D KCG+ K+A E+F L N + ++ MI+ L
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL----QNADTISWTMMISSLVGAR 204
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISA 517
+ EAL S+M G + TF ++ A
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/500 (20%), Positives = 207/500 (41%), Gaps = 47/500 (9%)
Query: 38 VSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
++F ++ P I +N ++ + H+ A+ + M++ ++P+ T L+
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
L V A + + G+ D N LI L+ K R + +G L
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLI---ALYAKCRRLGSAR--TVFEGLPLP 183
Query: 158 Q---VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ V++ +++ + G+ ALE+ ++ +KP V +++++ ++ +
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 215 LYSEMIAKGI-------------------------------SPNVVTYSALIYGFCIVGQ 243
+++ ++ G+ SPN++ ++A+I G+ G
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
++AI + EM+ K++ PD ++ + A + G + +A++M + + + DV S+
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L+D + V AR VF+ R + +V ++ MI G EA++L M+
Sbjct: 364 LIDMFAKCGSVEGARLVFD----RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
+ PN VT+ L+ +G V W + M Y +D L + H+D+
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+IK + +QP + + LL K ++ + Q LF + N Y + N
Sbjct: 480 EVIKCM---PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS-NTGHYVQLSNLY 535
Query: 484 CKEGLFDEALTLMSKMEDNG 503
L+D + +M++ G
Sbjct: 536 AAARLWDRVAEVRVRMKEKG 555
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 175/441 (39%), Gaps = 55/441 (12%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G H D+ + +LI +L Q H +L G Q LI+ G A
Sbjct: 17 GIHSDSF-YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
++ + +P + +N II + A +YS M +SP+ T+ L+
Sbjct: 73 RQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDV---------------------------------V 264
+ L+ + ++ D DV V
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
++ +V A + G+ EA + + M K VKPD V S+++ + + ++ + R + ++
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 325 ARRG--VTPNVQ-SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
+ G + P++ S N M Y C V A L ++M PN + ++++I G K
Sbjct: 249 VKMGLEIEPDLLISLNTM-YAKCG--QVATAKILFDKMKS----PNLILWNAMISGYAKN 301
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G A ++ EM + D I+ S + A + +++ ++ + + + D+
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
+ L+D KCG ++ A+ VF + + ++ MI G G EA++L ME
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVV----WSAMIVGYGLHGRAREAISLYRAMER 417
Query: 502 NGCIHDPITFETIISALFEKG 522
G + +TF ++ A G
Sbjct: 418 GGVHPNDVTFLGLLMACNHSG 438
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 153/349 (43%), Gaps = 26/349 (7%)
Query: 195 MYNTIIDSLC-KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 253
Y ++IDS K +L +++ ++ G+ + + LI+ G + A + D+
Sbjct: 23 FYASLIDSATHKAQLKQ----IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 254 MVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNE 313
+ P + +N ++ + ++A M + M V PD T+ L+ ++
Sbjct: 79 LP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK--VTY 371
+ R V + R G +V N +I K + + A + E + +P + V++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----LPERTIVSW 190
Query: 372 SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
++++ + G+ A E+ +M D + S L+A + +G ++ ++
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 432 KG--IQPDMCTYNILLDGL-CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
G I+PD+ I L+ + KCG++ A+ +F + K NL W N MI+G K G
Sbjct: 251 MGLEIEPDLL---ISLNTMYAKCGQVATAKILFDKM--KSPNLILW--NAMISGYAKNGY 303
Query: 489 FDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
EA+ + +M + D I+ + ISA + G ++A + E + R
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY-EYVGR 351
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 159/345 (46%), Gaps = 1/345 (0%)
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
AF + G DT T+N L+ G ++A + ++ + LD TY +I
Sbjct: 262 AFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIP 321
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
L K G+ +AA +L ++++ R ++P+ ++++++DS+ K + + +Y EM G P
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRP 381
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+ + +LI + G+L A+ L DEM P+ Y +++++ K GK+ A +
Sbjct: 382 SATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVF 441
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M K G P TYS L++ + +V+ A ++N+M G+ P + SY ++ L
Sbjct: 442 KDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANK 501
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITY 406
++VD A +L EM + V S ++ K V A + L M G +
Sbjct: 502 RLVDVAGKILLEMKAMGYSVD-VCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFII 560
Query: 407 NSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
++ K D L++ ++ + D+ Y +L L +C
Sbjct: 561 RQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRC 605
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 164/372 (44%), Gaps = 1/372 (0%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
Y +I L K + E A ++ + G K YN ++ L AF++Y M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ TY +I G+L A L +M + + P ++ LVD++GK G++
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
+ + M G +P + SL+D Y +++ A +++ M + G PN Y ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I K ++ A+ + ++M+ +P TYS L++ +G+V +A ++ + M G
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
+ +Y S L L VD ++ ++ G D+C ++L+ + K + A +
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALK 543
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
+ + G NN+ + K GL+D A L+ + + D + + +I++ L
Sbjct: 544 WLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLV 603
Query: 520 EKGENDKAEKLL 531
+ DK +L+
Sbjct: 604 RCQDEDKERQLM 615
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 159/367 (43%), Gaps = 3/367 (0%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+N+V+ L K + A ++ + +G + T N L+ G AF + ++
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
K D T+ +I L G+L A + + + + +++L++ + K G+ +
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
++++ ++G G +P+ M+ ++IDS K + A L+ EM G PN Y+ +I
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G+L+ A+ + +M P TY+ L++ G+V A + M G++
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI-MIYGLCKIKMVDEALN 354
P + +Y SL+ V+ A + M G + +V + ++ MIY K VD AL
Sbjct: 486 PGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIY--IKDASVDLALK 543
Query: 355 LLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALC 414
L M I N L + K G +A LL+ + D++ Y S L L
Sbjct: 544 WLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLV 603
Query: 415 KGHHVDK 421
+ DK
Sbjct: 604 RCQDEDK 610
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 136/291 (46%), Gaps = 3/291 (1%)
Query: 249 GLLDEMVLKNI---DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
L +EMV + D YN ++ L K K+ A + G K D TY++LM
Sbjct: 226 SLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLM 285
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
+ KA +++ +M + + +Y ++I L K +D A L ++M K+
Sbjct: 286 MLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLR 345
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
P+ +SSL+D + K G++ + ++ EM G + S +D+ K +D + L
Sbjct: 346 PSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL 405
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
++ G +P+ Y ++++ K G+++ A VF+D+ K G+ TY+ ++
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
G D A+ + + M + G ++ ++++ L K D A K+L EM A
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 1/340 (0%)
Query: 196 YNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
YN +I L K + + AF + + G + TY+ L+ F G +A + + M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
+ D TY +++ +L K G++ A + M ++ ++P +SSL+D ++
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
+ V+ M G P+ + +I K +D AL L +EM PN Y+ +I
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQ 435
+ K+GK+ A + +M G TY+ L+ VD + + + + G++
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 436 PDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
P + +Y LL L + A ++ ++ GY+++ + ++ + K+ D AL
Sbjct: 486 PGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKW 544
Query: 496 MSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+ M +G + + + + G D A LL ++
Sbjct: 545 LRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLV 584
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 128/293 (43%), Gaps = 1/293 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+D F +M + ++ P F+ ++ S+ K T++ + +M+ G P+
Sbjct: 328 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 387
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ + G+ +A + + K G+ P+ + +I+ GKL A+ D+
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKA 447
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
GF TY+ L+ GQ ++A+++ + G++P + Y +++ L +LV A
Sbjct: 448 GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVA 507
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ EM A G S +V L+ + + A+ L M I + L ++
Sbjct: 508 GKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFES 566
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
K G A+ +L ++ K D+V Y+S++ + +K R + + ++
Sbjct: 567 CMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSILS 619
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 185/379 (48%), Gaps = 23/379 (6%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL-YSE 218
TY LI+ C + + L++I IK T ++ +T+ S + D+ Y+
Sbjct: 26 TYLRLIDTQC------STMRELKQIHASLIK-TGLISDTVTASRVLAFCCASPSDMNYAY 78
Query: 219 MIAKGIS-PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN--IDPDVVTYNILVDALGK 275
++ I+ N ++ +I GF + AI + +M+ + + P +TY + A G+
Sbjct: 79 LVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGR 138
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
G+ R+ + + ++IK+G++ D ++++ Y + +A +F M + +V +
Sbjct: 139 LGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVA 194
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
+N MI G K ++D+A NL +EM N V+++S+I G + G+ +A ++ EM
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
+ D T S L+A ++G + + I+ + + L+D CKCG I+
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
+ VF+ KK L+ W N+MI GL G + A+ L S++E +G D ++F ++
Sbjct: 311 EGLNVFECAPKK--QLSCW--NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 516 SALFEKGENDKAEKLLREM 534
+A GE +A++ R M
Sbjct: 367 TACAHSGEVHRADEFFRLM 385
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 192/479 (40%), Gaps = 74/479 (15%)
Query: 55 EFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANI 114
E ++ SL+KT S ++ SR + +P+ + + YL +
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN-------YAYL------------V 80
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL--AQGFQLDQVTYATLINGLCKMG 172
R H + +NT+I+G A+ D+L + + ++TY ++ ++G
Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
Q +L + G++ + NT++ + A+ ++ MI +VV ++
Sbjct: 141 QARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWN 196
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
++I GF G + QA L DEM +N V++N ++ + G+ ++A +M M ++
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRN----GVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
VKPD T SL++ + + R + + R N +I CK ++E
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
LN+ E C K + W NS +
Sbjct: 313 LNVFE---------------------CAPKKQLSCW------------------NSMILG 333
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
L ++ + L ++ G++PD ++ +L G + A E F+ L K+ Y +
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR-LMKEKYMIE 392
Query: 473 NWT--YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
Y M+N L GL +EA L+ M D + + +++SA + G + A++
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE---EDTVIWSSLLSACRKIGNVEMAKR 448
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 18/290 (6%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + F+ M Q + +N +++ V+ + A+ + R+M+ + P+ T+
Sbjct: 208 IDQAQNLFDEMPQRNG----VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L+N YLG + + I++ + ++I LI C G + L + A
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE--CAPK 321
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
QL + ++I GL G E A++L +E G++P V + ++ + V A
Sbjct: 322 KQLS--CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 214 DLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ + M K I P++ Y+ ++ G L++A L+ M ++ D V ++ L+ A
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSA 436
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPD----VVTYSSLMDGYCLVNEVNKAR 318
K G V AK + K + PD V S+ Y L E + R
Sbjct: 437 CRKIGNVEMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEEAVEQR 484
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 222/500 (44%), Gaps = 34/500 (6%)
Query: 39 SFFNRMLQMRIT-PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
S++ R++ +T P + N + K + + L Q GI P+ + ++I
Sbjct: 56 SYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVI-- 113
Query: 98 HCYLGQTTSAFSVLANIL--KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
++ F +L L K G+ D N ++ H + A + D + Q
Sbjct: 114 -----KSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQIS----Q 164
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ +I+G K G E A +L + + VV + +I KVK + +A
Sbjct: 165 RKGSDWNVMISGYWKWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKY 220
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ M K +VV+++A++ G+ G + A+ L ++M+ + P+ T+ I++ A
Sbjct: 221 FDRMPEK----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
++++ ++ ++ V+ + ++L+D + ++ AR +FN + G N+ +
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVT 333
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
+N MI G +I + A L + M N V+++SLI G G+ + A E ++M
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 396 VRGQP-ADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
G D +T S L A ++ G ++ I I+ + Y L+ + G +
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETI 514
+A+ VF ++ ++ +YNT+ G E L L+SKM+D G D +T+ ++
Sbjct: 450 WEAKRVFDEMKERDVV----SYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 515 ISALFEKGENDKAEKLLREM 534
++A G + +++ + +
Sbjct: 506 LTACNRAGLLKEGQRIFKSI 525
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 198/442 (44%), Gaps = 56/442 (12%)
Query: 133 LCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPT 192
LC L RA++ D + + G D TY+ LI + R + G +P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
+ + N +I+ K L++ A L+ +M + NV++++ +I + ++A+ LL
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLV 151
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAV-MIKQGVKPDVVTYSSLMDGYCLV 311
M+ N+ P+V TY+ ++ + VR ML +IK+G++ DV S+L+D + +
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDVR----MLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 312 NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY 371
E A VF+ M VT + +N +I G + D AL L + M I + T
Sbjct: 208 GEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 372 SS---------------------------------LIDGLCKTGKVSNAWELLDEMHVRG 398
+S L+D CK G + +A + ++M R
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER- 322
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
D+IT+++ + L + + + + L +++ G +P+ T +L G ++D
Sbjct: 323 ---DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGW 379
Query: 459 EVFQDLFKKGYNLN--NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIIS 516
F+ + KK Y ++ Y MI+ L K G D+A+ L+++ME C D +T+ T++
Sbjct: 380 YYFRSM-KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLG 435
Query: 517 ALFEKGENDKAEKLLREMIARD 538
A + AE +++IA D
Sbjct: 436 ACRVQRNMVLAEYAAKKVIALD 457
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 189/487 (38%), Gaps = 61/487 (12%)
Query: 60 LTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK-RG 118
T L + A+ ++ G+ + T + LI C C + +++ L G
Sbjct: 33 FTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKC-CISNRAVHEGNLICRHLYFNG 91
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
+ P N LI L+ A Q D Q Q + +++ T+I+ K + AL
Sbjct: 92 HRPMMFLVNVLINMYVKFNLLNDAHQLFD----QMPQRNVISWTTMISAYSKCKIHQKAL 147
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
ELL + ++P V Y++++ S +S L+ +I +G+ +V SALI F
Sbjct: 148 ELLVLMLRDNVRPNVYTYSSVLRS---CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
+G+ + A+ + DEMV D + +N ++ + + A + M + G +
Sbjct: 205 AKLGEPEDALSVFDEMV----TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 299 VTYSS---------------------------------LMDGYCLVNEVNKARDVFNAMA 325
T +S L+D YC + A VFN M
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
R +V +++ MI GL + EAL L E M PN +T ++ G +
Sbjct: 321 ER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 386 NAWELLDEM-HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
+ W M + G Y +D L K +D + L+ ++ +PD T+ L
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTL 433
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNL---NNWTYNTMINGLCKEGLFDEALTLMSKMED 501
L G C R++ + + KK L + TY + N +D + ++M D
Sbjct: 434 L-GAC---RVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRD 489
Query: 502 NGCIHDP 508
G +P
Sbjct: 490 RGIKKEP 496
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 25/301 (8%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+D +S F+ M +T I +N ++ + A+ L ++M+ G TL +
Sbjct: 211 EDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
+ L +I+K Y D I N L+ C G L AL+ V Q
Sbjct: 267 LRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALR----VFNQMK 320
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D +T++T+I+GL + G ++ AL+L R++ G KP + ++ + L+ +
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWY 380
Query: 215 LYSEMIA-KGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ M GI P Y +I G+L A+ LL+EM +PD VT+ L+
Sbjct: 381 YFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLL--- 434
Query: 274 GKEGKVREAKNM-LAVMIKQGV----KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
G R +NM LA + V D TY+ L + Y + + ++ M RG
Sbjct: 435 ---GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRG 491
Query: 329 V 329
+
Sbjct: 492 I 492
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 220/532 (41%), Gaps = 74/532 (13%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
++ F N++ + +N+++ +++ ++ A+ L R+M+ +G T+ L+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
+ +L+ G + N+LI +GKL + + + + +
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS- 156
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
++ ++++ K+G + A+ LL +E G+KP +V +N+++ L A +
Sbjct: 157 ---SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 217 SEMIAKGISPNVVTYSAL---------------IYGFCIVGQLKQAI----GLLD----- 252
M G+ P+ + S+L I+G+ + QL + L+D
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 253 ------EMVLKNIDP-DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
MV +D ++V +N LV L +++A+ ++ M K+G+KPD +T++SL
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
GY + + KA DV M +GV PNV S+ + G K AL + +M E +
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIAL 425
PN T S+L+ L L L G V G L
Sbjct: 394 PNAATMSTLLKIL-----------------------------GCLSLLHSGKEV-HGFCL 423
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
K +I D L+D K G ++ A E+F + K +L +W N M+ G
Sbjct: 424 RKNLI-----CDAYVATALVDMYGKSGDLQSAIEIFWGI--KNKSLASW--NCMLMGYAM 474
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
G +E + S M + G D ITF +++S G + K M +R
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 184/420 (43%), Gaps = 46/420 (10%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VDD + + M + P I+ +N +L+ AI++ ++M+I G+ P+ +++
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 94 LINC-----HCYLGQTTSAFSVLANIL---------------KRGYHP------------ 121
L+ H LG+ + +L N L K GY P
Sbjct: 231 LLQAVAEPGHLKLGKAIHGY-ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
+ + +N+L+ GL L A + +G + D +T+ +L +G +G+ E AL+++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 182 RRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIV 241
+++ +G+ P VV + I K +A ++ +M +G+ PN T S L+ +
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK-PDVVT 300
L + + KN+ D LVD GK G ++ A + I G+K + +
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA-----IEIFWGIKNKSLAS 464
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK-IKMVDEALNLLEEM 359
++ ++ GY + + F+ M G+ P+ ++ ++ +CK +V E + M
Sbjct: 465 WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL-SVCKNSGLVQEGWKYFDLM 523
Query: 360 DYE-KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
IIP S ++D L ++G + AW+ + M ++ D + +FL + CK H
Sbjct: 524 RSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGAFLSS-CKIHR 579
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 199/444 (44%), Gaps = 19/444 (4%)
Query: 62 SLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHP 121
SL+ + + LSR++ + N + N +++ + LG A +L + G P
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
D +T+N+L+ G G A+ + G + + ++L+ + + G L+L
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH----LKLG 244
Query: 182 RRIEGRGIKPT----VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
+ I G ++ V + T+ID K + +A ++ M AK N+V +++L+ G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSG 300
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
LK A L+ M + I PD +T+N L GK +A +++ M ++GV P+
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLE 357
VV+++++ G A VF M GV PN + + ++ L + ++ +
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG 420
Query: 358 EMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
+ +I + ++L+D K+G + +A E+ + + + ++N L
Sbjct: 421 FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI----KNKSLASWNCMLMGYAMFG 476
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL--NNWT 475
++GIA +++ G++PD T+ +L G +++ + F DL + Y +
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYF-DLMRSRYGIIPTIEH 535
Query: 476 YNTMINGLCKEGLFDEALTLMSKM 499
+ M++ L + G DEA + M
Sbjct: 536 CSCMVDLLGRSGYLDEAWDFIQTM 559
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 187/419 (44%), Gaps = 5/419 (1%)
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
L+ Y P + + +++ GK+ A + ++L G + D V T++ + G+
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
A L + ++ R I + +YN ++ SL K DL+ EM+ +G+ PN TY+ +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+ + G ++A+ EM P+ VTY+ ++ K G +A + M QG+
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGI 359
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN--VQSYNIMIYGLCKIKMVDEA 352
P T ++++ Y KA +F M R + + ++ I IYG K+ + +A
Sbjct: 360 VPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYG--KLGLFHDA 417
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
++ EE + ++ ++ TY ++ +G V A ++++ M R P Y L
Sbjct: 418 QSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQC 477
Query: 413 LCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLN 472
K +VD + + G+ PD + N +L+ + + A+ + + + +
Sbjct: 478 YAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFD 536
Query: 473 NWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
Y T + CKEG+ EA L+ KM + D +T+ ++ ++DK E +L
Sbjct: 537 IELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVL 595
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 200/461 (43%), Gaps = 52/461 (11%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
+ + L +++N G ++L + K + N +I G + +A
Sbjct: 601 DVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIA 658
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
D ++ G ++++ T ATLI + GR K
Sbjct: 659 DIIIRLGLRMEEETIATLIA-----------------VYGRQHK---------------- 685
Query: 207 KLVSHAFDLYSEMIAKGIS--PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+ A LY +A G S P ++I + G L+ A GL E K DP V
Sbjct: 686 --LKEAKRLY---LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAV 740
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
T +ILV+AL GK REA+++ +++ ++ D V Y++L+ ++ A +++ M
Sbjct: 741 TISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERM 800
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
GV ++Q+YN MI + +D+A+ + + ++ Y+++I K GK+
Sbjct: 801 HTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKM 860
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLD--ALCKGHH-VDKGIALIKKIIDKGIQPDMCTY 441
S A L EM +G +YN + A + HH VD+ L++ + G D+ TY
Sbjct: 861 SEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDE---LLQAMERNGRCTDLSTY 917
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
L+ + + +A++ + +KG L++ ++++++ L K G+ +EA KM +
Sbjct: 918 LTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSE 977
Query: 502 NGCIHDPITFETIISALFEKGENDKA----EKLLREMIARD 538
G D TI+ G+ +K EK++R + D
Sbjct: 978 AGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 142/332 (42%), Gaps = 1/332 (0%)
Query: 85 TPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQ 144
TP + +I+ + G A+ + ++G P +T + L+ L GK A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 145 FHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLC 204
L + +LD V Y TLI + + G+ + A E+ R+ G+ ++ YNT+I
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+ + A +++S G+ + Y+ +I + G++ +A+ L EM K I P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
+YN++V E +L M + G D+ TY +L+ Y ++ +A +
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
+G+ + ++ ++ L K M++EA +M I P+ +++ G G
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDA 1000
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
++M +R D +S ++ L K
Sbjct: 1001 EKGILFYEKM-IRSSVEDDRFVSSVVEDLYKA 1031
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 122/594 (20%), Positives = 223/594 (37%), Gaps = 98/594 (16%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+ + + M I P +L+ KT++Y A+SL ME I + V ++
Sbjct: 345 EKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLI 404
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I + LG A S+ + D T+ + + G + +AL + + +
Sbjct: 405 IRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDI 464
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRG-------------------------- 188
L + Y ++ K+ + A E R + G
Sbjct: 465 PLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGF 524
Query: 189 IKPTVV--------MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
IK +V +Y T + CK +V+ A DL +M + + L I
Sbjct: 525 IKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHI 584
Query: 241 VGQLKQ-------------AIGLLDEMVLK--NIDPDVVTYNIL-------------VDA 272
V + + A+GL+ + LK N++ N++ + +
Sbjct: 585 VNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISS 644
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+EG V +A+ + ++I+ G++ + T ++L+ Y +++ +A+ ++ A A TP
Sbjct: 645 FVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLA-AGESKTPG 703
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT---------------------- 370
MI + +++A L E + P VT
Sbjct: 704 KSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISR 763
Query: 371 -------------YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
Y++LI + + GK+ A E+ + MH G P I TYN+ + +G
Sbjct: 764 TCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGL 823
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
+DK I + G+ D Y ++ K G++ +A +F ++ KKG +YN
Sbjct: 824 QLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN 883
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
M+ L E L+ ME NG D T+ T+I E + +AEK +
Sbjct: 884 MMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/532 (18%), Positives = 218/532 (40%), Gaps = 34/532 (6%)
Query: 38 VSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
++F+ + + RI +N +L+SL K + I L +M G+ PN T ++++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 98 HCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
+ G A + G+ P+ +T++++I G +A+ ++D+ +QG
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS 362
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
T AT+++ K AL L +E I V+ II K+ L A ++
Sbjct: 363 NYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE 422
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
E + + TY A+ G + +A+ +++ M ++I Y +++ K
Sbjct: 423 ETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQ 482
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
V A+ + K G+ PD + + +++ Y +N KA+ + V +++ Y
Sbjct: 483 NVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYK 541
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL------------------- 378
+ CK MV EA +L+ +M E + + +L + +
Sbjct: 542 TAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLD 601
Query: 379 -----------CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
K G ++ +L+ M + + N + + + V K +
Sbjct: 602 VMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIAD 659
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
II G++ + T L+ + ++K+A+ ++ + +MI+ + G
Sbjct: 660 IIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAA-GESKTPGKSVIRSMIDAYVRCG 718
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
++A L + + GC +T +++AL +G++ +AE + R + +++
Sbjct: 719 WLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNI 770
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 11/304 (3%)
Query: 83 GITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA 142
G P VT++IL+N G+ A + L++ DT+ +NTLIK + GKL A
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 143 LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS 202
+ ++ + G TY T+I+ + Q + A+E+ G+ +Y +I
Sbjct: 794 SEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMH 853
Query: 203 LCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIG-LLDEMVLKNIDP 261
K +S A L+SEM KGI P +Y+ ++ C +L + LL M
Sbjct: 854 YGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV-KICATSRLHHEVDELLQAMERNGRCT 912
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
D+ TY L+ + + EA+ + ++ ++G+ +SSL+ + +A +
Sbjct: 913 DLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTY 972
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT----YSSLIDG 377
M+ G++P+ ++ G ++ + + YEK+I + V SS+++
Sbjct: 973 CKMSEAGISPDSACKRTILKGYMTCGDAEKGI-----LFYEKMIRSSVEDDRFVSSVVED 1027
Query: 378 LCKT 381
L K
Sbjct: 1028 LYKA 1031
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 176/425 (41%), Gaps = 5/425 (1%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+++T + N M + + + N+V++S V+ S A ++ + G+ T+
Sbjct: 617 NLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIA 674
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI + + A L P ++I G L A + +
Sbjct: 675 TLIAVYGRQHKLKEA-KRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEK 733
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G VT + L+N L G+ A + R + I+ V YNT+I ++ + + A
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
++Y M G+ ++ TY+ +I + QL +AI + + D Y ++
Sbjct: 794 SEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMH 853
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD-VFNAMARRGVTP 331
GK GK+ EA ++ + M K+G+KP +Y+ +M C + ++ D + AM R G
Sbjct: 854 YGKGGKMSEALSLFSEMQKKGIKPGTPSYN-MMVKICATSRLHHEVDELLQAMERNGRCT 912
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
++ +Y +I + EA + + + I + +SSL+ L K G + A
Sbjct: 913 DLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTY 972
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
+M G D + L +KGI +K+I ++ D +++ D
Sbjct: 973 CKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAV 1032
Query: 452 GRIKD 456
G+ +D
Sbjct: 1033 GKEQD 1037
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
P VV Y I++ G+ GK++ A+ M++ G +PD V +++ Y +
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
+ A+ R + + YN M+ L K + ++L EM E + PN+ TY+ ++ K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCT 440
G A + EM G P+ T
Sbjct: 306 QGFKEEALKAFGEMK-----------------------------------SLGFVPEEVT 330
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
Y+ ++ K G + A +++D+ +G +N+T TM++ K + +AL+L + ME
Sbjct: 331 YSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADME 390
Query: 501 DNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
N D + II + G A+ + E +LL
Sbjct: 391 RNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLL 430
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 102 GQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ-----L 156
G+ + A S+ + + K+G P T ++N ++K +C +LH + D L Q +
Sbjct: 858 GKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEV----DELLQAMERNGRCT 912
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D TY TLI + Q A + + ++ +GI + +++++ +L K ++ A Y
Sbjct: 913 DLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTY 972
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD---AL 273
+M GISP+ ++ G+ G ++ I ++M+ +++ D +++ D A+
Sbjct: 973 CKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAV 1032
Query: 274 GKEGKV 279
GKE V
Sbjct: 1033 GKEQDV 1038
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 228/504 (45%), Gaps = 24/504 (4%)
Query: 35 DDTVSFFNRMLQMRITPPII-EFNKVLTSLVKTKHYSTAISLSRQMEITGITPN--FVTL 91
+ +S F +L IT I ++++ ++ L K L Q G+ PN F
Sbjct: 12 NSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKK 71
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
+ C G + A+ + I + PD + +N +IKG ++ + ++L
Sbjct: 72 LFVFWCSRLGGHVSYAYKLFVKIPE----PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLK 127
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+G D T+ L+NGL + G AL +++ +K + + ++L K+ +
Sbjct: 128 EGVTPDSHTFPFLLNGLKRDG---GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
D+ + + +V +++ +I G+ + + +++I LL EM + P VT +++
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
A K K + + + +P + ++L++ Y E++ A +F +M R
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR---- 300
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
+V S+ ++ G + + A ++M + ++++++ +IDG + G + + E+
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG-IQPDMCTYNILLDGLCK 450
EM G D T S L A ++ G IK IDK I+ D+ N L+D K
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
CG + AQ+VF D+ ++ + +T+ M+ GL G EA+ + +M+D D IT
Sbjct: 416 CGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 511 FETIISALFEKGENDKAEKLLREM 534
+ ++SA G D+A K +M
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKM 495
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 183/412 (44%), Gaps = 46/412 (11%)
Query: 161 YATLIN--GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
Y+ I+ G+CK T+ +L + RG+ P + C +L H Y +
Sbjct: 34 YSRFISILGVCK--TTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCS-RLGGHVSYAY-K 89
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
+ K P+VV ++ +I G+ V + + L M+ + + PD T+ L++ L ++G
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149
Query: 279 VRE-AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
K + ++K G+ ++ ++L+ Y L ++ AR VF+ R +V S+N
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD----RRCKEDVFSWN 205
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL------------------C 379
+MI G ++K +E++ LL EM+ + P VT ++ C
Sbjct: 206 LMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 380 KT-------GKVSNAWELLDEMHV-----RGQPA-DIITYNSFLDALCKGHHVDKGIALI 426
KT + NA+ EM + R A D+I++ S + KG+ + L
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTS----IVKGYVERGNLKLA 321
Query: 427 KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE 486
+ D+ D ++ I++DG + G ++ E+F+++ G + +T +++
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARD 538
G + + + ++ N +D + +I F+ G ++KA+K+ +M RD
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRD 433
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 234/540 (43%), Gaps = 77/540 (14%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+ + + F +M I I ++++ + S A + +M + T +
Sbjct: 65 NLQEAEAIFRQMSNRSIVSWI----AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMIT 120
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I C LG+ A+ + +I ++ + +++ T+I G G+ A + + +
Sbjct: 121 AMIKNKCDLGK---AYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
F+ D V L++G + G+ E +R +G +K VV ++++ CK+ + A
Sbjct: 174 -FR-DSVASNVLLSGYLRAGKWN---EAVRVFQGMAVKE-VVSCSSMVHGYCKMGRIVDA 227
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILVD 271
L+ M + NV+T++A+I G+ G + GL M + ++ + T ++
Sbjct: 228 RSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFK 283
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
A + RE + ++ + ++ D+ +SLM Y + + +A+ VF M +
Sbjct: 284 ACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK---- 339
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK--VTYSSLIDGLCKTGKVSNAWE 389
+ S+N +I GL + K + EA L E+M P K V+++ +I G G++S E
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKM------PGKDMVSWTDMIKGFSGKGEISKCVE 393
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI------ 443
L M + D IT+ + + A + ++ + K++ K + P+ T++
Sbjct: 394 LFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Query: 444 ----LLDGL-------------------------CKCGRIKDAQEVFQDLFKKGYNLNNW 474
L++GL CKCG DA ++F + + N
Sbjct: 450 SLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP----NIV 505
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+YNTMI+G G +AL L S +E +G + +TF ++SA G D K + M
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 10/244 (4%)
Query: 67 KHYSTAISLSRQMEITGITP--NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTI 124
K +S +S+ +E+ G+ P + +T +I+ G A +L++ P++
Sbjct: 380 KGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
TF++++ L LQ H V+ D +L++ CK G T A ++ I
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Query: 185 EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL 244
+P +V YNT+I A L+S + + G PN VT+ AL+ VG +
Sbjct: 500 S----EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYV 555
Query: 245 KQAIGLLDEMVLK-NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
M NI+P Y +VD LG+ G + +A N+++ M KP + S
Sbjct: 556 DLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM---PCKPHSGVWGS 612
Query: 304 LMDG 307
L+
Sbjct: 613 LLSA 616
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 183/427 (42%), Gaps = 46/427 (10%)
Query: 106 SAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLI 165
S+ LA +LK N +++ + G+ +Q + + G ++ TY++ I
Sbjct: 87 SSLQRLATVLK------VQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCI 139
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
ALE+ + I K V + N+I+ L K + L+ +M G+
Sbjct: 140 K-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLK 198
Query: 226 PNVVTYSALIYGFCIVGQ--LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
P+VVTY+ L+ G CI + +AI L+ E+ I D V Y ++ G+ EA+
Sbjct: 199 PDVVTYNTLLAG-CIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE 257
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
N + M +G P++ YSSL++ Y + KA ++ M G+ PN ++
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG----- 398
K + D + LL E++ N++ Y L+DGL K GK+ A + D+M +G
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDG 377
Query: 399 ------------------------------QPADIITYNSFLDALCKGHHVDKGIALIKK 428
+ D++ N+ L A C+ ++ + ++KK
Sbjct: 378 YANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKK 437
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL 488
+ ++ + PD T++IL+ K A + D+ KG+ L +++I L K
Sbjct: 438 MDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRA 497
Query: 489 FDEALTL 495
EA ++
Sbjct: 498 QAEAFSV 504
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 160/346 (46%), Gaps = 5/346 (1%)
Query: 172 GQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
G+ + ++L ++ G K +V Y++ I K VS A ++Y + + NV
Sbjct: 112 GRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYIC 169
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK-EGKVREAKNMLAVMI 290
++++ G+L I L D+M + PDVVTYN L+ K + +A ++ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 291 KQGVKPDVVTYSSLMDGYCLVN-EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
G++ D V Y +++ C N +A + M G +PN+ Y+ ++
Sbjct: 230 HNGIQMDSVMYGTVL-AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 350 DEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSF 409
+A L+ EM ++PNKV ++L+ K G + ELL E+ G + + Y
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 410 LDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+D L K +++ ++ + KG++ D +I++ LC+ R K+A+E+ +D
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 408
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
+ NTM+ C+ G + + +M KM++ D TF +I
Sbjct: 409 KCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 2/309 (0%)
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+V TYS+ I F + +A+ + + ++ +V N ++ L K GK+ +
Sbjct: 131 SVSTYSSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLV-NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
M + G+KPDVVTY++L+ G V N KA ++ + G+ + Y ++
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICAS 249
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
+EA N +++M E PN YSSL++ G A EL+ EM G + +
Sbjct: 250 NGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVM 309
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
+ L KG D+ L+ ++ G + Y +L+DGL K G++++A+ +F D+
Sbjct: 310 MTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMK 369
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 525
KG + + + MI+ LC+ F EA L E D + T++ A GE +
Sbjct: 370 GKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEME 429
Query: 526 KAEKLLREM 534
+++++M
Sbjct: 430 SVMRMMKKM 438
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 166/361 (45%), Gaps = 21/361 (5%)
Query: 63 LVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPD 122
V K+ S A+ + + + N N +++C G+ S + + + G PD
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 123 TITFNTLIKGLCLHGK--LHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
+T+NTL+ G C+ K +A++ ++ G Q+D V Y T++ G++E A
Sbjct: 201 VVTYNTLLAG-CIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENF 259
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
+++++ G P + Y+++++S A +L +EM + G+ PN V + L+ +
Sbjct: 260 IQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIK 319
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
G ++ LL E+ + + Y +L+D L K GK+ EA+++ M +GV+ D
Sbjct: 320 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYA 379
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
S ++ C +A+++ ++ N M+ C+ ++ + ++++MD
Sbjct: 380 NSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ + P+ T+ LI K +++H ++ Y + LD KGH ++
Sbjct: 440 EQAVSPDYNTFHILIKYFIK-----------EKLH-------LLAYQTTLDMHSKGHRLE 481
Query: 421 K 421
+
Sbjct: 482 E 482
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 1/293 (0%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI-NCHCYLGQTTSAFSVLANIL 115
N +L+ LVK + I L QM+ G+ P+ VT N L+ C A ++ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
G D++ + T++ +G+ A F + +G + Y++L+N G +
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 176 AALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
A EL+ ++ G+ P VM T++ K L + +L SE+ + G + N + Y L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 236 YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK 295
G G+L++A + D+M K + D +I++ AL + + +EAK + K
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
D+V ++++ YC E+ + M + V+P+ +++I+I K K+
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKL 462
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 124/279 (44%), Gaps = 36/279 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKH-YSTAISLS---------------- 76
+D + F++M + + P ++ +N +L +K K+ Y AI L
Sbjct: 182 LDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYG 241
Query: 77 -------------------RQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKR 117
+QM++ G +PN + L+N + + G A ++ +
Sbjct: 242 TVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSI 301
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G P+ + TL+K G R+ + ++ + G+ +++ Y L++GL K G+ E A
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
+ ++G+G++ + +I +LC+ K A +L + ++V + ++
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCA 421
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+C G+++ + ++ +M + + PD T++IL+ KE
Sbjct: 422 YCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKE 460
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 38/233 (16%)
Query: 42 NRMLQMRI---TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
N + QM++ +P I ++ +L S Y A L +M+ G+ PN V + L+ +
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD- 157
G + +L+ + GY + + + L+ GL GKL A DD+ +G + D
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDG 377
Query: 158 --------------------------QVTYA--------TLINGLCKMGQTEAALELLRR 183
+ TY T++ C+ G+ E+ + ++++
Sbjct: 378 YANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKK 437
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
++ + + P ++ +I K KL A+ +M +KG S+LIY
Sbjct: 438 MDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIY 490
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 201/449 (44%), Gaps = 32/449 (7%)
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL---DQV 159
++ S +S L ++ G+ P + TL CL H +L+F + + + L D
Sbjct: 53 RSKSRWSTLRSLQPSGFTPSQFSEITL----CLRNNPHLSLRFF--LFTRRYSLCSHDTH 106
Query: 160 TYATLINGLCKMGQTEAALELLR---RIEGRGIKPTVVM--YNTIIDSLCKVKLVSHAFD 214
+ +TLI+ L + A E++R R+ V+ + ++I S + FD
Sbjct: 107 SCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFD 166
Query: 215 LY--SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
L S + +K I V+ L I Q+ L+ E+ + + Y + +
Sbjct: 167 LLIKSCLDSKEIDGAVMVMRKL-RSRGINAQISTCNALITEVSRRRGASN--GYKMYREV 223
Query: 273 LG-KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR-GVT 330
G + V EAK M+ +KP+ T++S+M + E ++ M G +
Sbjct: 224 FGLDDVSVDEAKKMIG-----KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCS 278
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
PNV SYN+++ C ++ EA + EEM ++ + V Y+++I GLC +V A EL
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKEL 338
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC- 449
+M ++G +TY ++ CK VD G+ + +++ KG + D T L++GLC
Sbjct: 339 FRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCD 398
Query: 450 --KCGRIKDAQEVFQDLFKKG--YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
R+ +A ++ +D ++ Y N Y ++ LC++G D AL + ++M G
Sbjct: 399 DRDGQRVVEAADIVKDAVREAMFYPSRN-CYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 506 HDPITFETIISALFEKGENDKAEKLLREM 534
T+ I G+ + + L EM
Sbjct: 458 PSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 6/253 (2%)
Query: 48 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEI-TGITPNFVTLNILINCHCYLGQTTS 106
+I P FN ++ S + + R+ME G +PN + N+L+ +C G +
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 107 AFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLIN 166
A V + RG D + +NT+I GLC + ++ +A + D+ +G + +TY L+N
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVN 359
Query: 167 GLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVK---LVSHAFDLYSEMIAKG 223
G CK G ++ L + R ++ +G + + +++ LC + V A D+ + + +
Sbjct: 360 GYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREA 419
Query: 224 I-SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
+ P+ Y L+ C G++ +A+ + EMV K P TY +D G G E
Sbjct: 420 MFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD-EET 478
Query: 283 KNMLAVMIKQGVK 295
+LA+ + + +K
Sbjct: 479 SALLAIEMAESLK 491
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 150/310 (48%), Gaps = 12/310 (3%)
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++++ + T+ A + K + P F L+ LC HG + +A +F +LA
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF---MLAS 250
Query: 153 G--FQLDQVTYATLINGLCKMGQ--TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
F +D + ++NG C + TEA + R + I P Y+ +I KV
Sbjct: 251 KKLFPVDVEGFNVILNGWCNIWTDVTEAK-RIWREMGNYCITPNKDSYSHMISCFSKVGN 309
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
+ + LY EM +G++P + Y++L+Y +A+ L+ ++ + + PD VTYN
Sbjct: 310 LFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNS 369
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
++ L + GK+ A+N+LA MI + + P V T+ + ++ VN K +V M
Sbjct: 370 MIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEA---VN-FEKTLEVLGQMKISD 425
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
+ P +++ +++ L K K + AL + EMD +I+ N Y + I GL G + A
Sbjct: 426 LGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAR 485
Query: 389 ELLDEMHVRG 398
E+ EM +G
Sbjct: 486 EIYSEMKSKG 495
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 154/313 (49%), Gaps = 8/313 (2%)
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
++D S A + M +P + L+ C G +++A + + K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 259 IDP-DVVTYNILVDALGK-EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK 316
+ P DV +N++++ V EAK + M + P+ +YS ++ + V +
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 317 ARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID 376
+ +++ M +RG+ P ++ YN ++Y L + DEA+ L+++++ E + P+ VTY+S+I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
LC+ GK+ A +L M + T+++FL+A+ + +K + ++ ++ + P
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGP 428
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
T+ ++L L K + ++A +++ ++ + N Y I GL G ++A +
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIY 488
Query: 497 SKMEDNGCIHDPI 509
S+M+ G + +P+
Sbjct: 489 SEMKSKGFVGNPM 501
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 40/257 (15%)
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
+++D +A +M K P + L+ C + KA + +A +
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASK 251
Query: 328 GVTP-NVQSYNIMIYGLCKIKM-VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
+ P +V+ +N+++ G C I V EA + EM I PNK +YS +I K G +
Sbjct: 252 KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
++ L DEM RG I YNS + L + D+ + L+KK+ ++G++PD T
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT----- 366
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
YN+MI LC+ G D A +++ M
Sbjct: 367 ------------------------------YNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 506 HDPITFETIISAL-FEK 521
TF + A+ FEK
Sbjct: 397 PTVDTFHAFLEAVNFEK 413
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 137/302 (45%), Gaps = 8/302 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITP-NFVTL 91
+ + F+ M + + TP F +L +L + H A + + P +
Sbjct: 204 DTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEGF 261
Query: 92 NILINCHCYLG-QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
N+++N C + T A + + P+ +++ +I G L +L+ +D++
Sbjct: 262 NVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMK 321
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
+G Y +L+ L + + A++L++++ G+KP V YN++I LC+ +
Sbjct: 322 KRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLD 381
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A ++ + MI++ +SP V T+ A + ++ + +L +M + ++ P T+ +++
Sbjct: 382 VARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLIL 437
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
L K + A + A M + + + Y + + G + KAR++++ M +G
Sbjct: 438 GKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
Query: 331 PN 332
N
Sbjct: 498 GN 499
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 13/234 (5%)
Query: 307 GYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIP 366
+CL+ RD+FN ++ +M+ +A+ + MD K P
Sbjct: 174 AWCLI------RDMFNV-----SKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTP 222
Query: 367 NKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIAL 425
+ L+ LC+ G + A E + + P D+ +N L+ C V + +
Sbjct: 223 YDEAFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRI 281
Query: 426 IKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCK 485
+++ + I P+ +Y+ ++ K G + D+ ++ ++ K+G YN+++ L +
Sbjct: 282 WREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTR 341
Query: 486 EGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
E FDEA+ LM K+ + G D +T+ ++I L E G+ D A +L MI+ +L
Sbjct: 342 EDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 10/218 (4%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF-----CIVG 242
GI V +N I S C++ ++ A+ EM G++P+VVTY+ LI C++G
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
GL + MVLK P++ T+N+ + L + +A ++L +M K V+PD +TY+
Sbjct: 232 N-----GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
++ G+ L + A V+ AM +G PN++ Y MI+ LCK D A + ++ +
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK 346
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQP 400
K PN T L+ GL K G++ A +++ +H R P
Sbjct: 347 KWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPP 384
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDV 263
K + A D + M G +V +++A + L L + K ID D
Sbjct: 118 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 177
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
V++NI + + + G + A + M K G+ PDVVTY++L+ ++N
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
M +G PN+ ++N+ I L + +A +LL M ++ P+ +TY+ +I G
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 297
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
A + MH +G ++ Y + + LCK + D + K + K P++ T +
Sbjct: 298 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKK 467
LL GL K G++ A+ + + + ++
Sbjct: 358 LLKGLVKKGQLDQAKSIMELVHRR 381
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF-NAMARRGVTPN 332
GK G ++A + M G K V ++++ + +++ + +A ++ G+ +
Sbjct: 117 GKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDID 176
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
S+NI I C++ ++D A + EM+ + P+ VTY++LI L K + L +
Sbjct: 177 AVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWN 236
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M ++G ++ T+N + L L+ + ++PD TYN+++ G
Sbjct: 237 LMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF-LA 295
Query: 453 RIKD-AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
R D A+ V+ + KGY N Y TMI+ LCK G FD A T+ + T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 512 ETIISALFEKGENDKAEKLLREMIAR 537
E ++ L +KG+ D+A+ ++ E++ R
Sbjct: 356 EMLLKGLVKKGQLDQAKSIM-ELVHR 380
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 4/292 (1%)
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCK 205
H L QG + + ++ G K G T+ AL+ ++ G K +V +N + L
Sbjct: 96 HQKTLPQGRREGFIVRIIMLYG--KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSF 153
Query: 206 VKLVSHAFDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVV 264
+ ++ + +K GI + V+++ I FC +G L A + EM + PDVV
Sbjct: 154 NPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVV 213
Query: 265 TYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
TY L+ AL K + + +M+ +G KP++ T++ + A D+ M
Sbjct: 214 TYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLM 273
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
+ V P+ +YN++I G + D A + M + PN Y ++I LCK G
Sbjct: 274 PKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNF 333
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
A+ + + + ++ T L L K +D+ +++ +++ + + P
Sbjct: 334 DLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 15/260 (5%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
+V FN LQ ++ FN L ++ + H + + GI + V+ NI I
Sbjct: 140 SVKSFNAALQ------VLSFNPDLHTIWEFLHDAPSK--------YGIDIDAVSFNIAIK 185
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
C LG A+ + + K G PD +T+ TLI L H + + ++ +G +
Sbjct: 186 SFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKP 245
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
+ T+ I L + A +LL + ++P + YN +I + A +Y
Sbjct: 246 NLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVY 305
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+ M KG PN+ Y +I+ C G A + + + K P++ T +L+ L K+
Sbjct: 306 TAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKK 365
Query: 277 GKVREAKNMLAVMIKQGVKP 296
G++ +AK+++ ++ + V P
Sbjct: 366 GQLDQAKSIME-LVHRRVPP 384
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 229/493 (46%), Gaps = 49/493 (9%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
I+ N +LT VK + + A +L R+M N V+ +++ C G++ A +
Sbjct: 108 IVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFD 162
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
+ +R + +++NTL+ GL +G + +A Q D + ++ D V++ +I G +
Sbjct: 163 EMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIEND 214
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
E A L G + VV + +++ C+ V A+ L+ EM + N+V+++
Sbjct: 215 GMEEAKLLF----GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWT 266
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNID---PDVVTYNILVDALGKEGK--VREAKNMLA 287
A+I GF ++A+ L EM K++D P+ T L A G G R + + A
Sbjct: 267 AMISGFAWNELYREALMLFLEMK-KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHA 325
Query: 288 VMIKQG---VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
+I G V D SL+ Y + A+ + N + ++QS NI+I
Sbjct: 326 QVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYL 379
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
K ++ A L E + K + +KV+++S+IDG + G VS A+ L ++H + D +
Sbjct: 380 KNGDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGV 432
Query: 405 TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
T+ + L + + +L+ ++ G++P TY++LL + + + +
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 465 FKKG--YNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
K Y+ + N++++ K G ++A + +KM D +++ ++I L G
Sbjct: 493 AKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHG 548
Query: 523 ENDKAEKLLREMI 535
DKA L +EM+
Sbjct: 549 LADKALNLFKEML 561
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 150/304 (49%), Gaps = 33/304 (10%)
Query: 226 PNVVTY-------SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
PN +Y ALI G L A LLD++ + VV + L+ K G
Sbjct: 33 PNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGY 92
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
+ EA+ + VM ++ ++VT ++++ GY +N+A +F M + NV S+ +
Sbjct: 93 LDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTV 143
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
M+ LC ++A+ L +EM N V++++L+ GL + G + A ++ D M R
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR- 198
Query: 399 QPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQ 458
D++++N A+ KG+ + G+ K + + ++ T+ ++ G C+ G +++A
Sbjct: 199 ---DVVSWN----AMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAY 251
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+F ++ ++ N+ +WT MI+G L+ EAL L +M+ + P ET+IS
Sbjct: 252 RLFCEMPER--NIVSWT--AMISGFAWNELYREALMLFLEMKKDVDAVSP-NGETLISLA 306
Query: 519 FEKG 522
+ G
Sbjct: 307 YACG 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 179/414 (43%), Gaps = 48/414 (11%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N VT ++ +C G A+ + + +R + +++ +I G + AL
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLF 285
Query: 147 -------DDVLAQGFQLDQVTYATLINGL--CKMGQTEAALELLRRIE-----GRGIKPT 192
D V G L + YA G+ ++G+ A + E GR K
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSL 345
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYS-----------------EMIAKGISP--NVVTYSA 233
V MY + L++ +FDL S E + + + + V++++
Sbjct: 346 VHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTS 405
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
+I G+ G + +A GL ++ D D VT+ +++ L + EA ++L+ M++ G
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG 461
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT--PNVQSYNIMIYGLCKIKMVDE 351
+KP TYS L+ + +++ + + +A+ P++ N ++ K +++
Sbjct: 462 LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A + +M + + V+++S+I GL G A L EM G+ + +T+ L
Sbjct: 522 AYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLS 577
Query: 412 ALCKGHHVDKGIALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
A + +G+ L K + + IQP + Y ++D L + G++K+A+E L
Sbjct: 578 ACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 361 YEKIIPNKVTY-------SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
Y IPN +Y +LI G + +A LLD++ RG ++ + S L
Sbjct: 28 YGDKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKY 87
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
K ++D+ L + + ++ I T N +L G KC R+ +A +F+++ K N+ +
Sbjct: 88 AKTGYLDEARVLFEVMPERNI----VTCNAMLTGYVKCRRMNEAWTLFREMPK---NVVS 140
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLRE 533
WT M+ LC +G ++A+ L +M + + +++ T+++ L G+ +KA+++
Sbjct: 141 WT--VMLTALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 534 MIARDLL 540
M +RD++
Sbjct: 195 MPSRDVV 201
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 13/215 (6%)
Query: 86 PNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQF 145
P+ + N L++ + G A+ + A ++++ DT+++N++I GL HG +AL
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNL 556
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNTIIDSLC 204
++L G + + VT+ +++ G LEL + + E I+P + Y ++ID L
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLG 616
Query: 205 KVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFC-IVGQLKQAIGLLDEMVLKNIDPDV 263
+ + A + S A +P+ Y AL+ G C + + K A G+ + ++ ++ D
Sbjct: 617 RAGKLKEAEEFIS---ALPFTPDHTVYGALL-GLCGLNWRDKDAEGIAERAAMRLLELDP 672
Query: 264 VT---YNILVDALGKEGKVREAKNMLAVMIKQGVK 295
V + L + G+ K M M +GVK
Sbjct: 673 VNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVK 707
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 197/430 (45%), Gaps = 17/430 (3%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQ-MEITGITPNFVTLNILINCHCYLGQTTSAFS 109
P + N ++ ++ + K YS +ISL + + + I PN V+ N +IN HC G A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 110 VLANILKRG-YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
V +IL + P ++T+ L KGL G++ A ++L++G D Y LI G
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNV 228
+G + A+E ++ + ++ T ++ + A + Y ++ K +
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHP 357
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYN-----ILVDALGKEGKVREAK 283
T + L+ F G+ +A L +EM+ + P++++ N I+V+ K G+ EA
Sbjct: 358 PTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAI 417
Query: 284 NML-AVMIKQGVKP---DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
N V K KP D + Y +++ +C + +A F R + + S+ M
Sbjct: 418 NTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAM 477
Query: 340 IYGLCKIKMVDEALNLLEEM-DYE-KIIPNKVTYSSLIDG-LCKTGKVSNAWELLDEMHV 396
I K + +D+A+ +L+ M D +++ + + + G L K GK++ + E+L +M
Sbjct: 478 IDAYLKAERIDDAVKMLDRMVDVNLRVV---ADFGARVFGELIKNGKLTESAEVLTKMGE 534
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
R D Y+ + LC G +D+ ++ ++I + +++ K GR ++
Sbjct: 535 REPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREE 594
Query: 457 AQEVFQDLFK 466
+++ + +
Sbjct: 595 IEKILNSVAR 604
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 204/498 (40%), Gaps = 61/498 (12%)
Query: 60 LTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGY 119
+ SL++ A L+RQ + P T N +I + + + S+ K+
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 120 -HPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG-FQLDQVTYATLINGLCKMGQTEAA 177
P+ +++N +I C G + AL+ + +LA F VTY L GL + G+ A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
LLR EM++KG + + Y+ LI G
Sbjct: 272 ASLLR-----------------------------------EMLSKGQAADSTVYNNLIRG 296
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
+ +G +A+ DE+ K D + ++ ++G +EA ++ + +
Sbjct: 297 YLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMH 356
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN-----IMIYGLCKIKMVDEA 352
T + L++ + + ++A +FN M PN+ S N IM+ K+ EA
Sbjct: 357 PPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEA 416
Query: 353 LNLLEE-----------MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
+N ++ MDY + Y +++ C+ G ++ A E R PA
Sbjct: 417 INTFKKVGSKVTSKPFVMDY-------LGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPA 469
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
D ++ + +DA K +D + ++ +++D ++ + L K G++ ++ EV
Sbjct: 470 DAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVL 529
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
+ ++ + Y+ ++ GLC D+A ++ +M + + E II +
Sbjct: 530 TKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKA 589
Query: 522 GENDKAEKLLREMIARDL 539
G ++ EK+L +AR +
Sbjct: 590 GRREEIEKILNS-VARPV 606
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 108/250 (43%), Gaps = 11/250 (4%)
Query: 46 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN-----ILINCHCY 100
+ R+ PP N +L +K A +L +M PN +++N I++N
Sbjct: 352 KFRMHPPT--GNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFK 409
Query: 101 LGQTTSAFSVL----ANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
+G+ + A + + + + + D + + ++ C G L A +F + +++
Sbjct: 410 MGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPA 469
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
D ++ +I+ K + + A+++L R+ ++ + L K ++ + ++
Sbjct: 470 DAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVL 529
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
++M + P+ Y ++ G C L QA ++ EM+ N+ V +++ K
Sbjct: 530 TKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKA 589
Query: 277 GKVREAKNML 286
G+ E + +L
Sbjct: 590 GRREEIEKIL 599
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 240/525 (45%), Gaps = 59/525 (11%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG--ITPNFVTLNILINCHCYLGQTTSA 107
+P + ++SL K A+SL +M+ I P + IL C Y ++
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPE-IYGEILQGC-VYERDLSTG 89
Query: 108 FSVLANILKRGYHPDTITFNTLI--KGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLI 165
+ A ILK G D N I K + + K AL+ + + ++ + ++A +I
Sbjct: 90 KQIHARILKNG---DFYARNEYIETKLVIFYAKCD-ALEIAEVLFSKLRVRNVFSWAAII 145
Query: 166 NGLCKMGQTEAAL----ELL---------------------------RRIEG----RGIK 190
C++G E AL E+L R + G G++
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
V + +++ D K ++ A ++ E+ + N V ++AL+ G+ G+ ++AI L
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRL 261
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
+M + ++P VT + + A G V E K A+ I G++ D + +SL++ YC
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
V + A VF+ M + +V ++N++I G + +V++A+ + + M EK+ + VT
Sbjct: 322 VGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT 377
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKI 429
++L+ +T + E+ +DI+ ++ +D K G VD KK+
Sbjct: 378 LATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA-----KKV 432
Query: 430 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 489
D ++ D+ +N LL + G +A +F + +G N T+N +I L + G
Sbjct: 433 FDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 490 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
DEA + +M+ +G I + I++ T+++ + + G +++A LR+M
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 101/547 (18%), Positives = 211/547 (38%), Gaps = 90/547 (16%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSL-----VKTKHYSTAISLSRQMEITGITPNFV 89
++ + F+ M + + P + + L++ V+ S AI++ ME+ I
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS- 314
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
L+N +C +G A + R + D +T+N +I G G + A+ +
Sbjct: 315 ----LLNFYCKVGLIEYA----EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALEL----------------------------- 180
+ + D VT ATL++ + + E+
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 181 --LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
+++ ++ ++++NT++ + + L A L+ M +G+ PNV+T++ +I
Sbjct: 427 VDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD- 297
GQ+ +A + +M I P+++++ +++ + + G EA L M + G++P+
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 298 -----------------------------------VVTYSSLMDGYCLVNEVNKARDVFN 322
V +SL+D Y ++NKA VF
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 323 AMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
+ + + N MI + EA+ L ++ + P+ +T ++++ G
Sbjct: 607 SK----LYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 383 KVSNAWELL-DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
++ A E+ D + R + Y +D L +K + LI+++ +PD
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM---PFKPDARMI 719
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
L+ C R + + + N+ Y T+ N EG +DE + + M+
Sbjct: 720 QSLVAS-CNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 502 NGCIHDP 508
G P
Sbjct: 779 KGLKKKP 785
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 151/350 (43%), Gaps = 26/350 (7%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
++ + P + ++ + LC +G++ AL ++ + ++ Y ++ G
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 176 AALELLRRIEGRG--------IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
++ RI G I+ +V++ D+L ++ L+S++ + N
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEV------LFSKLRVR----N 137
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
V +++A+I C +G + A+ EM+ I PD + A G R + +
Sbjct: 138 VFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG 197
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
++K G++ V SSL D Y ++ A VF+ + R N ++N ++ G +
Sbjct: 198 YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNG 253
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
+EA+ L +M + + P +VT S+ + G V + V G D I
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
S L+ CK ++ + + D+ + D+ T+N+++ G + G ++DA
Sbjct: 314 SLLNFYCKVGLIEYA----EMVFDRMFEKDVVTWNLIISGYVQQGLVEDA 359
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 132/296 (44%), Gaps = 13/296 (4%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
VD+ F +M I P +I + ++ +V+ AI R+M+ +G+ PN ++
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNT-LIKGLCLHGKLHRALQFHDDVLA 151
+ ++ +L ++ I++ H ++ T L+ G +++A + L
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
L +I+ G + A+ L R +EG G+KP + ++ + ++
Sbjct: 611 SELPLSN----AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 212 AFDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
A ++++++++K + P + Y ++ G+ ++A+ L++EM K PD LV
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK---PDARMIQSLV 723
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL---VNEVNKARDVFNA 323
+ K+ K E + L+ + + + Y ++ + Y + +EV K R++ A
Sbjct: 724 ASCNKQRKT-ELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 149/305 (48%), Gaps = 15/305 (4%)
Query: 55 EFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANI 114
+F+++ L++TK ++ R M++ + L C + QT +F +
Sbjct: 123 KFDQIWELLIETKRKDRSLISPRTMQV--VLGRVAKL-------CSVRQTVESFWKFKRL 173
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
+ + DT FN L++ LC + A + L FQ D T+ L++G +
Sbjct: 174 VPDFF--DTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGWKSSEEA 230
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
EA E ++ G+G+KP VV YN++ID CK + + A+ L +M + +P+V+TY+ +
Sbjct: 231 EAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTV 287
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
I G ++GQ +A +L EM PDV YN + ++ +A ++ M+K+G+
Sbjct: 288 IGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
P+ TY+ L N++ ++ +++ M PN QS +I + + VD A+
Sbjct: 348 SPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMR 407
Query: 355 LLEEM 359
L E+M
Sbjct: 408 LWEDM 412
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 186/404 (46%), Gaps = 11/404 (2%)
Query: 136 HGKLHRALQFHDDVLA-QGFQLDQVTYATLINGLCKMGQTEAALELL---RRIEGRGIKP 191
HG + L+F+ A +GF + T++ L + + + ELL +R + I P
Sbjct: 85 HGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISP 144
Query: 192 -TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
T+ + + LC V+ +F + ++ + ++AL+ C + A +
Sbjct: 145 RTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNV 202
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
+ PD+ T+NIL+ EA+ M +G+KPDVVTY+SL+D YC
Sbjct: 203 YHSLK-HQFQPDLQTFNILLSGWKS---SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK 258
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
E+ KA + + M TP+V +Y +I GL I D+A +L+EM P+
Sbjct: 259 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
Y++ I C ++ +A +L+DEM +G + TYN F L + + + L +++
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML 378
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
P+ + L+ + ++ A +++D+ KG+ + + +++ LC +
Sbjct: 379 GNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVE 438
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
EA + +M + G ++F+ I + ++D+ L+++M
Sbjct: 439 EAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKM 482
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 179/393 (45%), Gaps = 30/393 (7%)
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA---- 212
D T +ING + +EL + GI + +ID + K SH
Sbjct: 41 DAETVFRMING------SNLQVELKESLSSSGIH----LSKDLIDRVLKRVRFSHGNPIQ 90
Query: 213 ---FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
F Y+ I +G + + ++Y + Q LL E K D +++ +
Sbjct: 91 TLEFYRYASAI-RGFYHSSFSLDTMLYILGRNRKFDQIWELLIET--KRKDRSLISPRTM 147
Query: 270 VDALGKEGKVREAKNMLAVMIK-QGVKPD---VVTYSSLMDGYCLVNEVNKARDVFNAMA 325
LG+ K+ + + K + + PD +++L+ C + AR+V++++
Sbjct: 148 QVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL- 206
Query: 326 RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVS 385
+ P++Q++NI++ G K +EA EEM + + P+ VTY+SLID CK ++
Sbjct: 207 KHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIE 263
Query: 386 NAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILL 445
A++L+D+M + D+ITY + + L DK ++K++ + G PD+ YN +
Sbjct: 264 KAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 446 DGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCI 505
C R+ DA ++ ++ KKG + N TYN L + L +M N C+
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
Query: 506 HDPITFETIISALFEKGEN-DKAEKLLREMIAR 537
+ + +I +F++ E D A +L +M+ +
Sbjct: 384 PNTQSCMFLIK-MFKRHEKVDMAMRLWEDMVVK 415
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 9/330 (2%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIE---FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFV 89
+V TV F + R+ P + FN +L +L + K + A ++ ++ P+
Sbjct: 159 SVRQTVESFWKF--KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQ 215
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
T NIL++ + + F + +G PD +T+N+LI C ++ +A + D +
Sbjct: 216 TFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKM 272
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
+ D +TY T+I GL +GQ + A E+L+ ++ G P V YN I + C + +
Sbjct: 273 REEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRL 332
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
A L EM+ KG+SPN TY+ + L ++ L M+ P+ + L
Sbjct: 333 GDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFL 392
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ + KV A + M+ +G + L+D C + +V +A M +G
Sbjct: 393 IKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGH 452
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
P+ S+ + + DE NL+++M
Sbjct: 453 RPSNVSFKRIKLLMELANKHDEVNNLIQKM 482
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 4/276 (1%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVF 321
D +N L+ L +E + +A+N+ + K +PD+ T++ L+ G+ +A F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 322 NAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
M +G+ P+V +YN +I CK + +++A L+++M E+ P+ +TY+++I GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY 441
G+ A E+L EM G D+ YN+ + C + L+ +++ KG+ P+ TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 442 NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMED 501
N+ L + + E++ + N + +I + D A+ L M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 502 NGCIHDPITFETIISALFEKGENDKAEKLLREMIAR 537
G + + ++ L + + ++AEK L EM+ +
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEK 450
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 129/281 (45%), Gaps = 3/281 (1%)
Query: 45 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQT 104
L+ + P + FN +L+ K A + +M+ G+ P+ VT N LI+ +C +
Sbjct: 206 LKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREI 262
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
A+ ++ + + PD IT+ T+I GL L G+ +A + ++ G D Y
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 322
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
I C + A +L+ + +G+ P YN L + +++LY M+
Sbjct: 323 IRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNEC 382
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
PN + LI F ++ A+ L ++MV+K + ++L+D L KV EA+
Sbjct: 383 LPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEK 442
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA 325
L M+++G +P V++ + L N+ ++ ++ MA
Sbjct: 443 CLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMA 483
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 175/373 (46%), Gaps = 22/373 (5%)
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D V++ T++ G + G ALE+++ + +KP+ + +++ ++ ++L+S +
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
++ + G V +AL+ + G L+ A L D M+ +N VV++N ++DA
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN----VVSWNSMIDAYV 313
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
+ +EA + M+ +GVKP V+ + + ++ + R + G+ NV
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
N +I CK K VD A ++ ++ + V+++++I G + G+ +A +M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 395 HVRGQPADIITYNSFLDALCK---GHHVD--KGIALIKKIIDKGIQPDMCTYNILLDGLC 449
R D TY S + A+ + HH G+ +++ +DK + L+D
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV-VMRSCLDKNV----FVTTALVDMYA 484
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPI 509
KCG I A+ +F + ++ T+N MI+G G AL L +M+ + +
Sbjct: 485 KCGAIMIARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 510 TFETIISALFEKG 522
TF ++ISA G
Sbjct: 541 TFLSVISACSHSG 553
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 149/362 (41%), Gaps = 82/362 (22%)
Query: 229 VTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAV 288
V Y ++ GF V L +A+ M +++P V + L+ G E ++R K + +
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
++K G D+ + L + Y +VN+AR VF+ M R ++ S+N ++ G + M
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGM 216
Query: 349 VDEALNLLEEMDYEKIIPNKVT-----------------------------------YSS 373
AL +++ M E + P+ +T ++
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
L+D K G + A +L D M R +++++NS +DA + + + + + +K++D+G
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 434 IQP-----------------------------------DMCTYNILLDGLCKCGRIKDAQ 458
++P ++ N L+ CKC + A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 459 EVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISAL 518
+F L + L +W N MI G + G +AL S+M D T+ ++I+A+
Sbjct: 393 SMFGKL--QSRTLVSW--NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448
Query: 519 FE 520
E
Sbjct: 449 AE 450
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 193/453 (42%), Gaps = 65/453 (14%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTL-NI---LINCHC 99
M + + P I VL ++ + IS+ +++ + F +L NI L++ +
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALR----LISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
G +A + +L+R + +++N++I + A+ +L +G + V
Sbjct: 283 KCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
+ ++ +G E + + G+ V + N++I CK K V D + M
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV----DTAASM 394
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
K S +V+++A+I GF G+ A+ +M + + PD TY ++ A+ +
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
AK + V+++ + +V ++L+D Y + AR +F+ M+ R VT ++N M
Sbjct: 455 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT----TWNAM 510
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVT----------------------------- 370
I G AL L EEM I PN VT
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 371 -------YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
Y +++D L + G+++ AW+ + +M V+ PA + Y + L A C+ H K +
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK--PA-VNVYGAMLGA-CQIH---KNV 623
Query: 424 ALIKKIIDK--GIQPDMCTYNILLDGLCKCGRI 454
+K ++ + PD Y++LL + + +
Sbjct: 624 NFAEKAAERLFELNPDDGGYHVLLANIYRAASM 656
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 118/264 (44%), Gaps = 15/264 (5%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D +++F++M + P + V+T++ + A + + + + N L+
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ + G A + + +R T+N +I G HG AL+ +++ +
Sbjct: 481 DMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ VT+ ++I+ G EA L+ + E I+ ++ Y ++D L + ++ A+D
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV--LKNIDPDVVTYNILVDA 272
+M K P V Y A++ G C Q+ + + ++ L ++PD Y++L+
Sbjct: 597 FIMQMPVK---PAVNVYGAML-GAC---QIHKNVNFAEKAAERLFELNPDDGGYHVLLAN 649
Query: 273 LGKEGKVREAKNMLAV-MIKQGVK 295
+ + + E + V M++QG++
Sbjct: 650 IYRAASMWEKVGQVRVSMLRQGLR 673
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 216/518 (41%), Gaps = 46/518 (8%)
Query: 56 FNKVLTSLVKTK-HYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANI 114
F ++ SL ++ H +ISL + + TLN L+ +C G + + + +
Sbjct: 566 FAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKM 625
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG-- 172
++ + D +T+ +LI+ C L+ L + D L N L + G
Sbjct: 626 VQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLV 685
Query: 173 -----------------QTEA----------------ALELLRRIEGRGIKPTVVMYNTI 199
Q+EA A +++R+EG G +YN +
Sbjct: 686 EEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHL 745
Query: 200 IDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
I LC K S AF + EM+ K P++ + LI C + A L ++ I
Sbjct: 746 IKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQ-----I 800
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
D V Y L+ L GK+ +A+N L +M+ G+ Y+ + GYC N K +
Sbjct: 801 DSSYVHY-ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEE 859
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV-TYSSLIDGL 378
V M R+ + +V+SY + +C A++L E + + P V Y+ LI +
Sbjct: 860 VLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYM 919
Query: 379 CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDM 438
+ ++L EM RG D T+N + + + +I KG++P+
Sbjct: 920 FRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNN 979
Query: 439 CTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT-MINGLCKEGLFDEALTLMS 497
+ + LC G +K A +++Q + KG+NL + T ++ L +G +A ++
Sbjct: 980 RSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLT 1039
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
++ NG + ++ II L ++G D A LL M+
Sbjct: 1040 RVTRNGMM--APNYDNIIKKLSDRGNLDIAVHLLNTML 1075
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 209/473 (44%), Gaps = 43/473 (9%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGY---HPDTITFNT 128
A+ L M G+ P ILI+ + +T SA+ + + ++ H + +
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 129 LIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG 188
+I+ LCL K+ A ++A G L+ Y+ + G + E L + ++
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK--- 318
Query: 189 IKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAI 248
+P V + N I+ SLC+ A+ E+ G + VT+ LI C G +K+A+
Sbjct: 319 YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAV 378
Query: 249 GLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
L E++ K PDV +YN ++ L ++G + +L M + G+ + T+ ++ GY
Sbjct: 379 LYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGY 438
Query: 309 CLVNEVNKARDVFNAMARRGVT-------PNVQSYNIMIYGLCKIKM------------- 348
C + +A+ + N M G+ P ++++++ + +++
Sbjct: 439 CKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEF 498
Query: 349 ---VDEALNLLEEMD-YEK---------IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
+ L L ++D YE+ ++P ++SLI + G + A LLDEM
Sbjct: 499 FDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMA 555
Query: 396 VRGQPADIITYNSFLDALCKGH-HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
GQ ++ + +LC H+ I+L++K Q D T N L+ CK G
Sbjct: 556 RWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFS 615
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
+ ++ +F + + + ++N TY ++I CK+ ++ L + +++ + D
Sbjct: 616 RHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPD 668
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/555 (22%), Positives = 221/555 (39%), Gaps = 112/555 (20%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+ +D +SF +++ P + N++L SL + A ++E G + VT
Sbjct: 306 DFEDLLSFIG---EVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFG 362
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI CY G A L+ I+ +GY PD ++N ++ GL G D++
Sbjct: 363 ILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKEN 422
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G L T+ ++ G CK Q E A ++ ++ G G+ + + + ++ V A
Sbjct: 423 GMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLA 482
Query: 213 ----------------FD-------LYSEMIAKGISPNVV-------TYSALIYGFCIVG 242
FD L++++ A N+V +++LI G
Sbjct: 483 VRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDG 542
Query: 243 QLKQAIGLLDEM--------------VLKNI----------------------DPDVVTY 266
L+ A+ LLDEM +++++ D T
Sbjct: 543 DLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETL 602
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC-------LVN------- 312
N LV K+G R +K + M++ D VTY+SL+ +C L+N
Sbjct: 603 NFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQN 662
Query: 313 -----EVNKARDVFNAMARRGVTPNVQ--------SYNIMIYGLCKIKMVDE-------- 351
++N D++N + R+G+ V SY + C+I V++
Sbjct: 663 DNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRI-FVEKLTVLGFSC 721
Query: 352 -ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
A ++++ ++ E I + Y+ LI GLC K S A+ +LDEM + + + +
Sbjct: 722 IAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLI 781
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
LC+ + L ++I + + L+ GL G++ DA+ + + G +
Sbjct: 782 PRLCRANKAGTAFNLAEQIDSSYV------HYALIKGLSLAGKMLDAENQLRIMLSNGLS 835
Query: 471 LNNWTYNTMINGLCK 485
N YN M G CK
Sbjct: 836 SYNKIYNVMFQGYCK 850
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 223/506 (44%), Gaps = 16/506 (3%)
Query: 34 VDDTVSFFNRMLQMRITPPII--EFNKVLTSLVKTKHYS-TAISLSRQMEITGITPNFVT 90
V++ V F R+ I+ P+ E ++ + +S A S+ +++E G
Sbjct: 685 VEEVVQLFERVF---ISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEV 741
Query: 91 LNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
N LI C + ++AF++L +L + + P + LI LC K A L
Sbjct: 742 YNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFN-----L 796
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
A+ V YA LI GL G+ A LR + G+ +YN + CK
Sbjct: 797 AEQIDSSYVHYA-LIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWM 855
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP-DVVTYNIL 269
++ M+ K I +V +Y + C+ Q AI L + ++L +P V+ YN+L
Sbjct: 856 KVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNML 915
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ + + E +L M +GV PD T++ L+ GY + + + +AM +G+
Sbjct: 916 IFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGM 975
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI-IPNKVTYSSLIDGLCKTGKVSNAW 388
PN +S + LC V +AL+L + M+ + + + V + +++ L G++ A
Sbjct: 976 KPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAE 1035
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
+ L + G A Y++ + L ++D + L+ ++ P +Y+ +++GL
Sbjct: 1036 DFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGL 1093
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
+ ++ A + ++ + G + + T++ +++ C+ E+ L+ M G
Sbjct: 1094 LRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQ 1153
Query: 509 ITFETIISALFEKGENDKAEKLLREM 534
F+T+I + KA +++ M
Sbjct: 1154 EMFKTVIDRFRVEKNTVKASEMMEMM 1179
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 189/466 (40%), Gaps = 47/466 (10%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+N ++ L K S A ++ +M P+ + +LI C + +AF++ I
Sbjct: 742 YNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQID 801
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG--- 172
H LIKGL L GK+ A +L+ G Y + G CK
Sbjct: 802 SSYVH------YALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWM 855
Query: 173 QTEAALELLRR---------------------------------IEGRGIKPTVVMYNTI 199
+ E L L+ R + G V++YN +
Sbjct: 856 KVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNML 915
Query: 200 IDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI 259
I + + K + EM +G+ P+ T++ L++G+ ++ L M+ K +
Sbjct: 916 IFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGM 975
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVK-PDVVTYSSLMDGYCLVNEVNKAR 318
P+ + + +L G V++A ++ VM +G V + +++ E+ KA
Sbjct: 976 KPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAE 1035
Query: 319 DVFNAMARRGV-TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
D + R G+ PN Y+ +I L +D A++LL M + IP +Y S+I+G
Sbjct: 1036 DFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVING 1092
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
L + ++ A + EM G I T++ + C+ V + LIK ++ G P
Sbjct: 1093 LLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPS 1152
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+ ++D A E+ + + K GY ++ T+ ++I+ +
Sbjct: 1153 QEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNM 1198
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 128/274 (46%), Gaps = 11/274 (4%)
Query: 245 KQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL 304
++A+ L D M K + P Y IL+D L + + A + ++ + + + S+
Sbjct: 200 RKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSI 259
Query: 305 ---MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
++ CL +V +AR + + G N Y+ + G + + ++ L+ + E+ Y
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKY 319
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
E P+ + ++ LC+ A+ ++E+ G D +T+ + C + +
Sbjct: 320 E---PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
+ + +I+ KG +PD+ +YN +L GL + G + + ++ + G L+ T+ M+
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436
Query: 482 GLCKEGLFDEALTLMSKMEDNGCI-----HDPIT 510
G CK F+EA +++KM G I DP++
Sbjct: 437 GYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLS 470
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 34/287 (11%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
+I +N ++ + + K++ + +M+ G+ P+ T N L++ + +S+ L+
Sbjct: 909 VIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLS 968
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL-DQVTYATLINGLCKM 171
++ +G P+ + + LC +G + +AL + ++G+ L V ++ L
Sbjct: 969 AMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISK 1028
Query: 172 GQTEAALELLRRIEGRGIK---------------------------------PTVVMYNT 198
G+ A + L R+ G+ P Y++
Sbjct: 1029 GEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDS 1088
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
+I+ L + + A D ++EM+ G+SP++ T+S L++ FC Q+ ++ L+ MV
Sbjct: 1089 VINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLG 1148
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
P + ++D E +A M+ +M K G + D T+ SL+
Sbjct: 1149 ESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLI 1195
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK---EGKVREAKNMLAVMIKQGVKPDV 298
G +K+ LL EM + +V I D +GK + R+A + M ++G+ P
Sbjct: 161 GMVKEVELLLMEM--ERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLT 218
Query: 299 VTYSSLMDGYCLVNEVNKA-RDVFNAMARRGVTP--NVQSYNIMIYGLCKIKMVDEALNL 355
Y L+D V+ A R + + R N+ S +I LC + V EA L
Sbjct: 219 SCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVL 278
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
++ I N YS + G + + + E V+ +P D+ N L +LC+
Sbjct: 279 ARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGE--VKYEP-DVFVGNRILHSLCR 335
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
++ ++++ G + D T+ IL+ C G IK A ++ KGY + ++
Sbjct: 336 RFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYS 395
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
YN +++GL ++GL+ ++ +M++NG + TF+ +++ + + ++A++++ +M
Sbjct: 396 YNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMF 455
Query: 536 ARDLL 540
L+
Sbjct: 456 GYGLI 460
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/493 (20%), Positives = 183/493 (37%), Gaps = 77/493 (15%)
Query: 100 YLGQTTSAFSVLAN-ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
YL A+ N +L R P+ FN+LI G L AL+ D++ G +L +
Sbjct: 507 YLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMARWGQKLSR 563
Query: 159 VTYATLINGLC-KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
++A L+ LC ++ LL + + N ++ CK H+ ++
Sbjct: 564 RSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFH 623
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
+M+ + VTY++LI FC L + + N PD+ L + L ++G
Sbjct: 624 KMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKG 683
Query: 278 KVREA-----KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
V E + ++ + Q + + G+ + A V + G
Sbjct: 684 LVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCI-----AHSVVKRLEGEGCIVE 738
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ YN +I GLC K A +L+EM +K IP+ + LI LC+ K A+ L +
Sbjct: 739 QEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAE 798
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID----------KGIQPDMCTYN 442
+ +D+ + + KG++L K++D G+ YN
Sbjct: 799 Q----------------IDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYN 842
Query: 443 ILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL------- 495
++ G CK +EV + +K + +Y + +C E A++L
Sbjct: 843 VMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLG 902
Query: 496 -----------------------------MSKMEDNGCIHDPITFETIISALFEKGENDK 526
+ +M+ G + D TF ++ +
Sbjct: 903 ESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSS 962
Query: 527 AEKLLREMIARDL 539
+ + L MI++ +
Sbjct: 963 SLRYLSAMISKGM 975
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 20/371 (5%)
Query: 67 KHYSTAISLSRQMEITG-ITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTIT 125
+ S A +S +T I+P +L L+N + F + + +
Sbjct: 19 RFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESER--FRTNIAV 76
Query: 126 FNTLIKGLCLHGKLHRALQF------HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALE 179
++ ++ L +LH + + D+ +GF A +I+ K G E A +
Sbjct: 77 YDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFA------ARIISLYGKAGMFENAQK 130
Query: 180 LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK-GISPNVVTYSALIYGF 238
+ + R K +V+ +N ++ + K +L++E+ K I P++V+Y+ LI
Sbjct: 131 VFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKAL 190
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
C L +A+ LLDE+ K + PD+VT+N L+ + +G+ + + A M+++ V D+
Sbjct: 191 CEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDI 250
Query: 299 VTYSSLMDGYCLVNEVNKAR--DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
TY++ + G L NE ++F + G+ P+V S+N MI G +DEA
Sbjct: 251 RTYNARLLG--LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWY 308
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+E+ P+K T++ L+ +CK G +A EL E + T +D L KG
Sbjct: 309 KEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKG 368
Query: 417 HHVDKGIALIK 427
++ ++K
Sbjct: 369 SKREEAEEIVK 379
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 140/273 (51%), Gaps = 1/273 (0%)
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARR 327
++ GK G A+ + M + K V+++++L+ Y L + + ++FN + +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA 387
+ P++ SYN +I LC+ + EA+ LL+E++ + + P+ VT+++L+ G+
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 388 WELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
E+ +M + DI TYN+ L L + + L ++ G++PD+ ++N ++ G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 448 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
G++ +A+ ++++ K GY + T+ ++ +CK G F+ A+ L + +
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 508 PITFETIISALFEKGENDKAEKLLREMIARDLL 540
T + ++ L + + ++AE++++ D L
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK- 257
II K + +A ++ EM + +V++++AL+ + + + L +E+ K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 258 NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
+I PD+V+YN L+ AL ++ + EA +L + +G+KPD+VT+++L+ L +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 318 RDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
+++ M + V ++++YN + GL E +NL E+ + P+ +++++I G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
GK+ A E+ G D T+ L A+CK + I L K+ K
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQ 462
T L+D L K + ++A+E+ +
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIVK 379
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 1/249 (0%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQME-ITGITPNFVTLNILINCHC 99
F M ++ FN +L++ +K + L ++ I P+ V+ N LI C
Sbjct: 132 FEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALC 191
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
A ++L I +G PD +TFNTL+ L G+ + ++ + +D
Sbjct: 192 EKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIR 251
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM 219
TY + GL +++ + L ++ G+KP V +N +I + A Y E+
Sbjct: 252 TYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI 311
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ G P+ T++ L+ C G + AI L E K T LVD L K K
Sbjct: 312 VKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKR 371
Query: 280 REAKNMLAV 288
EA+ ++ +
Sbjct: 372 EEAEEIVKI 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
N+ Y+ + L K + +LEE + + + + +I K G NA ++
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 132
Query: 392 DEMHVRGQPADIITYNSFLD------------------------------------ALCK 415
+EM R ++++N+ L ALC+
Sbjct: 133 EEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCE 192
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+ + +AL+ +I +KG++PD+ T+N LL G+ + +E++ + +K ++ T
Sbjct: 193 KDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRT 252
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
YN + GL E E + L +++ +G D +F +I +G+ D+AE +E++
Sbjct: 253 YNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIV 312
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 190/437 (43%), Gaps = 26/437 (5%)
Query: 105 TSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATL 164
T + V + + G PD+ L K Q H G +D ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 165 INGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGI 224
+ + G+ A ++ R+ + VV + ++ + + + + SEM + GI
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
N+V+++ ++ GF G K+A+ + ++ PD VT + ++ ++G + +
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA--MARRGVTPNVQSYNIMIYG 342
+ +IKQG+ D S+++D Y V +FN M GV N I G
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC------NAYITG 327
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
L + +VD+AL + E + + N V+++S+I G + GK A EL EM V G +
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 403 IITYNSFLDALCK----GH-HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDA 457
+T S L A GH G A+ ++D ++ + L+D KCGRI +
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-----NVHVGSALIDMYAKCGRINLS 442
Query: 458 QEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
Q VF + K NL W N+++NG G E +++ + D I+F +++SA
Sbjct: 443 QIVFNMMPTK--NLVCW--NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Query: 518 LFEKGENDKAEKLLREM 534
+ G D+ K + M
Sbjct: 499 CGQVGLTDEGWKYFKMM 515
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 202/474 (42%), Gaps = 17/474 (3%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
D F+RM ++ + +L + + + + +ME +GI N V+ N ++
Sbjct: 169 DARKVFDRMSD----KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
+ G A + I G+ PD +T ++++ + L+ H V+ QG
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
D+ + +I+ K G + L + E + N I L + LV A ++
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFE----MMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+ + + NVV+++++I G G+ +A+ L EM + + P+ VT ++ A G
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+ ++ ++ + +V S+L+D Y +N ++ VFN M T N+
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP----TKNLVC 456
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
+N ++ G E +++ E + ++ P+ ++++SL+ + G W+ M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 396 VR-GQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI 454
G + Y+ ++ L + + + LIK++ +PD C + LL+ C+
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLNS-CRLQNN 572
Query: 455 KDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
D E+ + N TY + N +G++ E ++ +KME G +P
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 136/309 (44%), Gaps = 8/309 (2%)
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
P + ++S+LIY Q+IG+ M + PD L + + K +
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
V G+ D S+ Y + AR VF+ M+ + +V + + ++ +
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYAR 194
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
++E + +L EM+ I N V+++ ++ G ++G A + ++H G D +T
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVT 254
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
+S L ++ ++ G + +I +G+ D C + ++D K G + LF
Sbjct: 255 VSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG----IISLF 310
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 525
+ + N I GL + GL D+AL + ++ + +++ +II+ + G++
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 526 KAEKLLREM 534
+A +L REM
Sbjct: 371 EALELFREM 379
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 41/237 (17%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTL-- 91
VD + F + + ++ + ++ + A+ L R+M++ G+ PN VT+
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 92 ------NILINCHCYLGQTTSAFSVLANILKRGY-------------------------- 119
NI H G++T F+V ++L +
Sbjct: 394 MLPACGNIAALGH---GRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 120 HPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALE 179
+ + +N+L+ G +HGK + + ++ + D +++ +L++ ++G T+ +
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 180 LLRRI-EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALI 235
+ + E GIKP + Y+ +++ L + + A+DL EM P+ + AL+
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALL 564
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 4/257 (1%)
Query: 113 NILKRGYH-PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKM 171
N++ G+ +T N +++G G + ++ + +G D +Y+ ++ +CK
Sbjct: 178 NVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKS 237
Query: 172 GQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
G+ A++L + ++ R +K VV YNT+I ++ + V ++ EM +G PNV T+
Sbjct: 238 GKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ +I C G+++ A +LDEM + PD +TY L L K E ++ MI+
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIR 354
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
GV+P + TY LM + + V+ M G TP+ +YN +I L + M+D
Sbjct: 355 SGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDM 414
Query: 352 ALNLLEEMDYEKIIPNK 368
A EEM + P +
Sbjct: 415 AREYEEEMIERGLSPRR 431
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 179/420 (42%), Gaps = 70/420 (16%)
Query: 157 DQVTY--ATLINGL-CKMGQTEAALELLRRIEGR-GIKPTVVMYNTIIDSLCKVKLVSHA 212
DQ +Y T+ L C + ALE +E G + T +N +ID L K +
Sbjct: 41 DQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEIS 100
Query: 213 FDLYSEMIAKGIS-PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+ L + MI S PN VT+ + + +++AI D++ N+ + YN LVD
Sbjct: 101 WALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVD 159
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
AL + V EA+ + C V + N +
Sbjct: 160 ALCEHKHVVEAEEL-----------------------CFGKNV-----IGNGFS----VS 187
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELL 391
N + +N+++ G K+ + ++MD E + + +YS +D +CK+GK A +L
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 392 DEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKC 451
EM R D++ YN+ + A+ V+ GI + +++ ++G +P++ T+N ++ LC+
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 452 GRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKE------------------------- 486
GR++DA + ++ K+G ++ TY + + L K
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 487 -------GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDL 539
G L + M+++G D + +I AL +KG D A + EMI R L
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 99 CYLGQTTSAFSVLANILKR--GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
CY A N ++R G+ T TFN +I L + + + + ++ +
Sbjct: 56 CYSNDWQKALEFF-NWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESV 114
Query: 157 -DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ VT+ + + A++ +++ ++ YN ++D+LC+ K V A +L
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEEL 173
Query: 216 Y--SEMIAKGIS-PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+I G S N ++ ++ G+ +G + +M + + D+ +Y+I +D
Sbjct: 174 CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDI 233
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ K GK +A + M + +K DVV Y++++ V VF M RG PN
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
V ++N +I LC+ + +A +L+EM P+ +TY L L K ++ + L
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFG 350
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M G + TY + + + + + K + + G PD YN ++D L + G
Sbjct: 351 RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Query: 453 RIKDAQEVFQDLFKKG 468
+ A+E +++ ++G
Sbjct: 411 MLDMAREYEEEMIERG 426
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 144/320 (45%), Gaps = 9/320 (2%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL-DQVTYATLINGLCKMGQTEAALE 179
P+ +TF + K + A+ +D + F L D+ ++ L++ LC+ A E
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKL--DDFNLRDETSFYNLVDALCEHKHVVEAEE 172
Query: 180 LL--RRIEGRGIK-PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
L + + G G ++N I+ K+ + + +M +G++ ++ +YS +
Sbjct: 173 LCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMD 232
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
C G+ +A+ L EM + + DVV YN ++ A+G V + M ++G +P
Sbjct: 233 IMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEP 292
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
+V T+++++ C + A + + M +RG P+ +Y + +++ E L+L
Sbjct: 293 NVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLF 349
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
M + P TY L+ + G + + M G D YN+ +DAL +
Sbjct: 350 GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQK 409
Query: 417 HHVDKGIALIKKIIDKGIQP 436
+D +++I++G+ P
Sbjct: 410 GMLDMAREYEEEMIERGLSP 429
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 3/240 (1%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N +L K + ++M+ G+T + + +I ++ C G+ A + +
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
R D + +NT+I+ + + ++ ++ +G + + T+ T+I LC+ G+
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
A +L + RG +P + Y + L K S L+ MI G+ P + TY L+
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFSRLEK---PSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
F G L+ + + M PD YN ++DAL ++G + A+ MI++G+ P
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 37 TVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILIN 96
V + M R+ ++ +N V+ ++ ++ I + R+M G PN T N +I
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 97 CHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA---LQFHDDVLAQG 153
C G+ A+ +L + KRG PD+IT+ +CL +L + L ++ G
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSG 356
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
+ TY L+ + G + L + + ++ G P YN +ID+L + ++ A
Sbjct: 357 VRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAR 416
Query: 214 DLYSEMIAKGISPN 227
+ EMI +G+SP
Sbjct: 417 EYEEEMIERGLSPR 430
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 196/434 (45%), Gaps = 59/434 (13%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
F ++ L L++ Q H ++ + D LI+ L QT A+ + +++
Sbjct: 19 FEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ 78
Query: 186 GRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM-------------------------- 219
+P V + N++I + + AF ++SEM
Sbjct: 79 ----EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP 134
Query: 220 --------IAK-GISPNVVTYSALI--YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
I K G+S ++ +ALI Y C ++ A+ L ++M + D V++N
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNS 190
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
++ L K G++R+A+ + M ++ D++++++++DGY E++KA ++F M R
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER- 245
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
N S++ M+ G K ++ A + ++M N VT++ +I G + G + A
Sbjct: 246 ---NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEAD 300
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
L+D+M G D S L A + + G+ + + + + N LLD
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 449 CKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDP 508
KCG +K A +VF D+ KK +L +W NTM++GL G EA+ L S+M G D
Sbjct: 361 AKCGNLKKAFDVFNDIPKK--DLVSW--NTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 509 ITFETIISALFEKG 522
+TF ++ + G
Sbjct: 417 VTFIAVLCSCNHAG 430
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 188/399 (47%), Gaps = 32/399 (8%)
Query: 75 LSRQMEITGITPNFVTLNILINCHCYLGQ--TTSAFSVLANILKRGYHPDTITFNTLIKG 132
+ +E G++ + N LI+C+ G A + + +R DT+++N+++ G
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGG 194
Query: 133 LCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPT 192
L G+L A + D++ Q D +++ T+++G + + A EL ++ R
Sbjct: 195 LVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMPER----N 246
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
V ++T++ K + A ++ +M + NVVT++ +I G+ G LK+A L+D
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
+MV + D ++ A + G + + +++ + + + ++L+D Y
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
+ KA DVFN + ++ ++ S+N M++GL EA+ L M E I P+KVT+
Sbjct: 365 NLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT----YNSFLDALCKGHHVDKGIALIKK 428
++ LC E +D + + D++ Y +D L + + + I +++
Sbjct: 421 AV---LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT 477
Query: 429 IIDKGIQPDMCTYNILLDGLCKCGRIKD-AQEVFQDLFK 466
+ ++P++ + LL G C+ D A+EV +L K
Sbjct: 478 M---PMEPNVVIWGALL-GACRMHNEVDIAKEVLDNLVK 512
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 191/447 (42%), Gaps = 24/447 (5%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
F + L L K + + L Q+ + + LI+ QT A V +
Sbjct: 19 FEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ 78
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ P+ N+LI+ + + ++A ++ G D TY L+
Sbjct: 79 E----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP 134
Query: 176 AALELLRRIEGRGIKPTVVMYNTIID--SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
+ IE G+ + + N +ID S C V A L+ +M + + V++++
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNS 190
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
++ G G+L+ A L DEM + D++++N ++D + ++ +A + M ++
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER- 245
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+ V++S+++ GY ++ AR +F+ M NV ++ I+I G + ++ EA
Sbjct: 246 ---NTVSWSTMVMGYSKAGDMEMARVMFDKMPL--PAKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
L+++M + + S++ ++G +S + + ++ N+ LD
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
K ++ K + I K D+ ++N +L GL G K+A E+F + ++G +
Sbjct: 361 AKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKME 500
T+ ++ GL DE + ME
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDYFYSME 443
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 144/305 (47%), Gaps = 30/305 (9%)
Query: 242 GQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
L Q L +++ +N+ D+ L+ AL + N+ + Q +P+V
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALS----LCRQTNLAVRVFNQVQEPNVHLC 85
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMI---YGLCKIKMVDEALNLLEE 358
+SL+ + ++ +A VF+ M R G+ + +Y ++ G + +V N +E+
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 359 MDYEK--IIPNKVTYSSLIDGLCKTGK--VSNAWELLDEMHVRGQPADIITYNSFLDALC 414
+ +PN +LID + G V +A +L ++M R D +++NS L L
Sbjct: 146 LGLSSDIYVPN-----ALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLV 196
Query: 415 KGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
K + +++ D+ Q D+ ++N +LDG +C + A E+F+ + ++ N
Sbjct: 197 KAGELRDA----RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTV 248
Query: 475 TYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+++TM+ G K G + A + KM + +T+ II+ EKG +A++L+ +M
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 535 IARDL 539
+A L
Sbjct: 307 VASGL 311
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/523 (22%), Positives = 224/523 (42%), Gaps = 73/523 (13%)
Query: 41 FNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNF--VTLNILINCH 98
F+R+ Q P + +N +L + YS A +S P+ VT N+LI +
Sbjct: 64 FDRIPQ----PNLFSWNNLLLA------YSKAGLISEMESTFEKLPDRDGVTWNVLIEGY 113
Query: 99 CYLGQTTSAFSVLANILKRGYHPD--TITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQL 156
G +A N + R + + +T T++K +G + Q H V+ GF+
Sbjct: 114 SLSGLVGAAVKAY-NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFES 172
Query: 157 DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLY 216
+ + L+ +G A ++ ++ R VMYN+++ L ++ A L+
Sbjct: 173 YLLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQLF 228
Query: 217 SEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKE 276
+G+ + V+++A+I G G K+AI EM ++ + D + ++ A G
Sbjct: 229 -----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283
Query: 277 GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSY 336
G + E K + A +I+ + + S+L+D YC ++ A+ VF+ M ++ NV S+
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSW 339
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT----------YSSLIDG--------- 377
M+ G + +EA+ + +M I P+ T SSL +G
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAIT 399
Query: 378 ----------------LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
K G + ++ L +EM+VR D +++ + + A + +
Sbjct: 400 SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVE 455
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL--NNWTYNTM 479
I L K++ G++PD T ++ + G ++ Q F+ L Y + + Y+ M
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK-LMTSEYGIVPSIGHYSCM 514
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
I+ + G +EA+ ++ M D I + T++SA KG
Sbjct: 515 IDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKG 554
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 188/438 (42%), Gaps = 63/438 (14%)
Query: 135 LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVV 194
+HG + RAL + + L Y +++ M + A RR+ R +P +
Sbjct: 28 IHGNIIRALPYPETFL----------YNNIVHAYALMKSSTYA----RRVFDRIPQPNLF 73
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
+N ++ + K L+S + ++ + + VT++ LI G+ + G + A+ + M
Sbjct: 74 SWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 255 VLKNIDPDV--VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
+++ ++ VT ++ G V K + +IK G + ++ S L+ Y V
Sbjct: 130 -MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
++ A+ VF + R N YN ++ GL M+++AL L M+ + V+++
Sbjct: 189 CISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQLFRGME-----KDSVSWA 239
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG---------------- 416
++I GL + G A E EM V+G D + S L A C G
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA-CGGLGAINEGKQIHACIIR 298
Query: 417 ----HHVDKGIALI------------KKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
H+ G ALI K + D+ Q ++ ++ ++ G + GR ++A ++
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKI 358
Query: 461 FQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFE 520
F D+ + G + +++T I+ +E K +G IH ++++ +
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418
Query: 521 KGENDKAEKLLREMIARD 538
G+ D + +L EM RD
Sbjct: 419 CGDIDDSTRLFNEMNVRD 436
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 149/354 (42%), Gaps = 21/354 (5%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
++D + F M + ++ + ++ L + AI R+M++ G+ +
Sbjct: 221 IEDALQLFRGMEKDSVS-----WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
++ LG + A I++ + + LI C LH A D +
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK--- 332
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
Q + V++ ++ G + G+ E A+++ ++ GI P I + V +
Sbjct: 333 -QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 214 DLYSEMIAKGISPNVVTYSALI--YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+ + I G+ V ++L+ YG C G + + L +EM ++ D V++ +V
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKC--GDIDDSTRLFNEMNVR----DAVSWTAMVS 445
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM-ARRGVT 330
A + G+ E + M++ G+KPD VT + ++ V K + F M + G+
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
P++ Y+ MI + ++EA+ + M + P+ + +++L+ G +
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP---PDAIGWTTLLSACRNKGNL 556
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 24/272 (8%)
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
LG + R K + +I+ P+ Y++++ Y L+ AR VF+ + + P
Sbjct: 15 GLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ----P 70
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNK--VTYSSLIDGLCKTGKVSNAWE 389
N+ S+N ++ K ++ E E +EK +P++ VT++ LI+G +G V A +
Sbjct: 71 NLFSWNNLLLAYSKAGLISEM-----ESTFEK-LPDRDGVTWNVLIEGYSLSGLVGAAVK 124
Query: 390 LLDEMHVRGQPADI--ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
+ M +R A++ +T + L HV G + ++I G + + + LL
Sbjct: 125 AYNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 448 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
G I DA++VF L + N YN+++ GL G+ ++AL L ME D
Sbjct: 184 YANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMIEDALQLFRGMEK-----D 234
Query: 508 PITFETIISALFEKGENDKAEKLLREMIARDL 539
+++ +I L + G +A + REM + L
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 194/418 (46%), Gaps = 24/418 (5%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P++I FN ++ L + + F+ + G +LDQ ++ ++ + K+ +EL
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 181 LRRIEGRGIKPTVV----MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
G K + + +D +++A +++ EM + +VVT++ +I
Sbjct: 134 ----HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR----DVVTWNTMIE 185
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
+C G + +A L +EM N+ PD + +V A G+ G +R + + +I+ V+
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
D ++L+ Y ++ AR+ F M+ R N+ M+ G K +D+A +
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
++ + + + V ++++I ++ A + +EM G D+++ S + A
Sbjct: 302 DQTEKKDL----VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 357
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+DK + I G++ ++ N L++ KCG + ++VF+ + ++ N+ +W+
Sbjct: 358 GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR--NVVSWS- 414
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+MIN L G +AL+L ++M+ + +TF ++ G ++ +K+ M
Sbjct: 415 -SMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 154/353 (43%), Gaps = 13/353 (3%)
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
N+ H D +T+NT+I+ C G + A + +++ D++ +++ + G
Sbjct: 167 NVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
+ R I I+ V M ++ +L + + D+ E K N+ +
Sbjct: 227 N----MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
A++ G+ G+L A + D+ K D+V + ++ A + +EA + M
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
G+KPDVV+ S++ + ++KA+ V + + G+ + N +I K +D
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
++ E+M N V++SS+I+ L G+ S+A L M + +T+ L
Sbjct: 399 RDVFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 413 LCKGHHVDKGIALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
V++G + + D+ I P + Y ++D + +++A EV + +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 159/380 (41%), Gaps = 39/380 (10%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
+ VT N +I +C G AF + + PD + ++ G + +
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGI----------------- 189
+ ++ ++D L+ G + A E R++ R +
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 190 ----------KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFC 239
K +V + T+I + + A ++ EM GI P+VV+ ++I
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
+G L +A + + + ++ ++ N L++ K G + +++ M ++ +VV
Sbjct: 356 NLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVV 411
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
++SS+++ + E + A +F M + V PN ++ ++YG +V+E + M
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 360 -DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH- 417
D I P Y ++D + + A E+++ M V ++++ + S + A C+ H
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV---ASNVVIWGSLMSA-CRIHG 527
Query: 418 HVDKGIALIKKIIDKGIQPD 437
++ G K+I++ ++PD
Sbjct: 528 ELELGKFAAKRILE--LEPD 545
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 165/370 (44%), Gaps = 3/370 (0%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGF-QLDQVTYATLINGLCKMGQTEAALELLRR 183
T + L + +AL+ D + Q F Q + TY L+ L K GQ A +L
Sbjct: 90 TVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDE 149
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIA-KGISPNVVTYSALIYGFCIVG 242
+ G++PTV +Y ++ + + L+ AF + +M + P+V TYS L+
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 243 QLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVM-IKQGVKPDVVTY 301
Q L EM + I P+ VT NI++ G+ G+ + + +L+ M + KPDV T
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+ ++ + + +++ + G+ P +++NI+I K +M D+ +++E M
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 329
Query: 362 EKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
+ TY+++I+ G N D+M G AD T+ ++ K
Sbjct: 330 LEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHK 389
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
I+ ++ I + YN ++ K + + + V+ + ++ ++ T+ M+
Sbjct: 390 VISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVE 449
Query: 482 GLCKEGLFDE 491
KEG+ D+
Sbjct: 450 AYEKEGMNDK 459
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 3/283 (1%)
Query: 243 QLKQAIGLLDEMVLKNI-DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
Q QA+ + D + + P TY L+ LGK G+ A+ + M+++G++P V Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 302 SSLMDGYCLVNEVNKARDVFNAMAR-RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
++L+ Y N ++ A + + M P+V +Y+ ++ D +L +EMD
Sbjct: 163 TALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMD 222
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHV 419
I PN VT + ++ G + G+ ++L +M V D+ T N L +
Sbjct: 223 ERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKI 282
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
D + +K + GI+P+ T+NIL+ K V + + K + TYN +
Sbjct: 283 DMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNI 342
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
I G +M G D TF +I+ G
Sbjct: 343 IEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 122/280 (43%), Gaps = 8/280 (2%)
Query: 34 VDDTVSFFNRMLQM-RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+DD S ++M + P + ++ +L + V + SL ++M+ ITPN VT N
Sbjct: 175 IDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQN 234
Query: 93 ILINCHCYLGQTTSAFSVLANIL-KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
I+++ + +G+ VL+++L PD T N ++ GK+ +++
Sbjct: 235 IVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRN 294
Query: 152 QGFQLDQVTYATLINGLCK---MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKL 208
G + + T+ LI K + + +E +R++E T YN II++ V
Sbjct: 295 FGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE---FPWTTSTYNNIIEAFADVGD 351
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
+ + +M ++G+ + T+ LI G+ G + I + I + YN
Sbjct: 352 AKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNA 411
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
++ A K + E + + M ++ D T+ +++ Y
Sbjct: 412 VISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAY 451
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 148/369 (40%), Gaps = 40/369 (10%)
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
TL+ LI +L Q F +L + Y P T+ L+ L G+ +RA + D++
Sbjct: 94 TLSDLIAKKQWL-QALEVFDMLRE--QTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEM 150
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEG-RGIKPTVVMYNTIIDSLCKVKL 208
L +G + Y L+ + + A +L +++ +P V Y+T++ +
Sbjct: 151 LEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQ 210
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN---------- 258
LY EM + I+PN VT + ++ G+ VG+ Q +L +M++
Sbjct: 211 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 270
Query: 259 --------------------------IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
I+P+ T+NIL+ + GK+ + +++ M K
Sbjct: 271 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 330
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
TY+++++ + V + F+ M G+ + +++ +I G + +
Sbjct: 331 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 390
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
++ ++ +I N Y+++I K + + M R D T+ ++A
Sbjct: 391 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEA 450
Query: 413 LCKGHHVDK 421
K DK
Sbjct: 451 YEKEGMNDK 459
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 316 KARDVFNAMARRGV-TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
+A +VF+ + + P +Y ++ L K + A L +EM E + P Y++L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 375 IDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
+ ++ + +A+ +LD+M Q D+ TY++ L A D +L K++ ++
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQD-LFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
I P+ T NI+L G + GR ++V D L + WT N +++ G D
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+ K + G + TF +I + +K DK ++ M
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 126/329 (38%), Gaps = 2/329 (0%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+ K+L L K+ + A L +M G+ P L+ + AFS+L +
Sbjct: 127 YMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK 186
Query: 116 KRGY-HPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
PD T++TL+K + + ++ + + VT +++G ++G+
Sbjct: 187 SFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRF 246
Query: 175 EAALELLRR-IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
+ ++L + KP V N I+ + + Y + GI P T++
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNI 306
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG 293
LI + + +++ M TYN +++A G + + M +G
Sbjct: 307 LIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEG 366
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
+K D T+ L++GY +K A+ + N YN +I K + E
Sbjct: 367 MKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEME 426
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTG 382
+ M + + + T+ +++ K G
Sbjct: 427 RVYIRMKERQCVCDSRTFEIMVEAYEKEG 455
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 19/243 (7%)
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
L+ LG+EG V+EA M + KPDV Y+++++ C V KAR + + M G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 329 V--TPNVQSYNIMIYGLCKIKM-----------VDEALNLLEEMDYEKIIPNKVTYSSLI 375
P+ +Y I+I C+ M + EA + EM + +P+ VTY+ LI
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 376 DGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK--KIIDKG 433
DG CKT ++ A EL ++M +G + +TYNSF+ + ++ I +++ K + G
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGL---FD 490
+ P TY L+ L + R +A+++ ++ + G +TY + + L EGL D
Sbjct: 351 V-PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLD 409
Query: 491 EAL 493
E L
Sbjct: 410 EEL 412
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 141/317 (44%), Gaps = 22/317 (6%)
Query: 139 LHRALQFHDDVLAQ-GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYN 197
L +AL+F + GF +++T + L K + + LR++ R VV
Sbjct: 107 LQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTA 166
Query: 198 TI---IDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
+I + L + V A + M P+V Y+ +I C VG K+A LLD+M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 255 VLKNI--DPDVVTYNILVDALGKEG-----------KVREAKNMLAVMIKQGVKPDVVTY 301
L PD TY IL+ + + G ++ EA M M+ +G PDVVTY
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDY 361
+ L+DG C N + +A ++F M +G PN +YN I ++ A+ ++ M
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM-- 344
Query: 362 EKI---IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
+K+ +P TY+ LI L +T + + A +L+ EM G TY DAL
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGL 404
Query: 419 VDKGIALIKKIIDKGIQ 435
+ K + +GIQ
Sbjct: 405 ASTLDEELHKRMREGIQ 421
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 25/277 (9%)
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIV------GQLKQAIGLLDEMVLKNIDPDVVTY 266
+D ++ + NVVT +++ C++ G +K+A+ M + PDV Y
Sbjct: 147 WDFLRQVSRRENGKNVVTTASIT---CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAY 203
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVK--PDVVTYSSLMDGYC-----------LVNE 313
N +++AL + G ++A+ +L M G + PD TY+ L+ YC +
Sbjct: 204 NTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRR 263
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
+ +A +F M RG P+V +YN +I G CK + AL L E+M + +PN+VTY+S
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQ--PADIITYNSFLDALCKGHHVDKGIALIKKIID 431
I T ++ A E++ M G P TY + AL + + L+ ++++
Sbjct: 324 FIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS-STYTPLIHALVETRRAAEARDLVVEMVE 382
Query: 432 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKG 468
G+ P TY ++ D L G E ++G
Sbjct: 383 AGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREG 419
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 20/236 (8%)
Query: 89 VTLNILINCHCYLGQTTSAFSVLANILK-RGYH--PDTITFNTLIKGLCLHGKLHRALQF 145
++ L+ C LG+ LA + + YH PD +NT+I LC G +A
Sbjct: 166 ASITCLMKC---LGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL 222
Query: 146 HDDVLAQGFQL--DQVTYATLINGLCKMGQTEAALELLRR-----------IEGRGIKPT 192
D + GF+ D TY LI+ C+ G + +RR + RG P
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
VV YN +ID CK + A +L+ +M KG PN VTY++ I + + +++ AI ++
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMR 342
Query: 253 EM-VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
M L + P TY L+ AL + + EA++++ M++ G+ P TY + D
Sbjct: 343 TMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 306 DGYCLVNEVNKAR---DVFNAMARRGVTPNV---QSYNIMIYGLCKIKMVDEALNLLEEM 359
D CL+ + N + D ++RR NV S ++ L + V EAL M
Sbjct: 132 DMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRM 191
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG--QPADIITYNSFLDALCK-- 415
P+ Y+++I+ LC+ G A LLD+M + G P D TY + + C+
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 416 ---------GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFK 466
+ + + ++++ +G PD+ TYN L+DG CK RI A E+F+D+
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKT 311
Query: 467 KGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG-CIHDPITFETIISALFEKGEND 525
KG N TYN+ I + A+ +M M+ G + T+ +I AL E
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 526 KAEKLLREMIARDLL 540
+A L+ EM+ L+
Sbjct: 372 EARDLVVEMVEAGLV 386
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 19/249 (7%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRG--YHPDTITFNTL 129
A++ +M+ P+ N +IN C +G A +L + G Y PDT T+ L
Sbjct: 184 ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTIL 243
Query: 130 IKGLCLHG-----------KLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
I C +G ++ A + ++L +GF D VTY LI+G CK + AL
Sbjct: 244 ISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRAL 303
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEM--IAKGISPNVVTYSALIY 236
EL ++ +G P V YN+ I + A ++ M + G+ P TY+ LI+
Sbjct: 304 ELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIH 362
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
+ +A L+ EMV + P TY ++ DAL EG L +++G++
Sbjct: 363 ALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQ 422
Query: 297 DVVTYSSLM 305
YS +M
Sbjct: 423 ---RYSRVM 428
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 199/482 (41%), Gaps = 41/482 (8%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N V N +I + + G++ + ++ GY+ D TF +L+ L QFH
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFH 451
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
++ + + L++ K G E A ++ R+ R V +NTII S +
Sbjct: 452 SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQD 507
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
+ S AFDL+ M GI + ++ + V L Q + V +D D+ T
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 267 NILVDALGKEGKVREAKNMLAV------------------------------MIKQGVKP 296
+ L+D K G +++A+ + + M+ +GV P
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNP 627
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL-CKIKMVDEALNL 355
+T++++++ + + +RG + + I + G+ + + EA L
Sbjct: 628 SEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
E+ K I V ++ ++ G + G A + EM G D T+ + L
Sbjct: 688 FSELSSPKSI---VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV 744
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+ +G A+ I D T N L+D KCG +K + +VF ++ ++ N+ +W
Sbjct: 745 LSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS-NVVSW- 802
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
N++ING K G ++AL + M + + D ITF +++A G+ K+ MI
Sbjct: 803 -NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
Query: 536 AR 537
+
Sbjct: 862 GQ 863
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 180/434 (41%), Gaps = 16/434 (3%)
Query: 84 ITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRAL 143
+ + N +++ + +G+ ++ + P+ TF+ ++ +
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 144 QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
Q H ++ G + + L++ K + A RR+ + P V + +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA----RRVFEWIVDPNTVCWTCLFSGY 236
Query: 204 CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDV 263
K L A ++ M +G P+ + + +I + +G+LK A L EM PDV
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDV 292
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
V +N+++ GK G A M K VK T S++ +V ++ V
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
+ G+ N+ + ++ K + ++ A + E ++ EK N V ++++I G G+
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EK---NDVFWNAMIRGYAHNGE 408
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
EL +M G D T+ S L H ++ G II K + ++ N
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 444 LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
L+D KCG ++DA+++F+ + + +N T+NT+I ++ EA L +M G
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 504 CIHDPITFETIISA 517
+ D + + A
Sbjct: 525 IVSDGACLASTLKA 538
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 193/448 (43%), Gaps = 23/448 (5%)
Query: 73 ISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKG 132
IS +R++ + PN V L + + G A V + G+ PD + F T+I
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT 270
Query: 133 LCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPT 192
GKL A ++ + D V + +I+G K G A+E + +K T
Sbjct: 271 YIRLGKLKDARLLFGEMSSP----DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 193 VVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLD 252
+++ ++ V + +++E I G++ N+ S+L+ + +++ A + +
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 253 EMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
+ KN V +N ++ G+ + + M G D T++SL+ +
Sbjct: 387 ALEEKND----VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
++ + + ++ + N+ N ++ K +++A + E M + VT++
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM----CDRDNVTWN 498
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
++I + S A++L M++ G +D S L A H + +G + +
Sbjct: 499 TIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC 558
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW---TYNTMINGLCKEGLF 489
G+ D+ T + L+D KCG IKDA++VF +L W + N +I G + L
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFS-------SLPEWSVVSMNALIAGYSQNNL- 610
Query: 490 DEALTLMSKMEDNGCIHDPITFETIISA 517
+EA+ L +M G ITF TI+ A
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEA 638
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/544 (20%), Positives = 221/544 (40%), Gaps = 55/544 (10%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFV---- 89
++D F RM + +N ++ S V+ ++ S A L ++M + GI +
Sbjct: 479 LEDARQIFERMCD----RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAS 534
Query: 90 TLNILINCH-CYLGQTTSAFSVLANILKRGYHPDT------------------------- 123
TL + H Y G+ SV L R H +
Sbjct: 535 TLKACTHVHGLYQGKQVHCLSVKCG-LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 124 --ITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELL 181
++ N LI G L A+ ++L +G ++T+AT++ K +
Sbjct: 594 SVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 182 RRIEGRGIKPTVVMYN-TIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
+I RG +++ + ++ A L+SE+ + ++V ++ ++ G
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP---KSIVLWTGMMSGHSQ 709
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
G ++A+ EM + PD T+ ++ +RE + + +++ D +T
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
++L+D Y ++ + VF+ M RR NV S+N +I G K ++AL + + M
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR-GQPADIITYNSFLDALCKGHHV 419
I+P+++T+ ++ GKVS+ ++ + M + G A + +D L + ++
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
+ I+ + ++PD ++ LL G C+ E+ + + N+ Y +
Sbjct: 887 QEADDFIEA---QNLKPDARLWSSLL-GACRIHGDDIRGEISAEKLIELEPQNSSAYVLL 942
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDP----ITFETIISALFEKGENDKAEKLLREMI 535
N +G +++A L M D G P I E + +F G+ +E EM
Sbjct: 943 SNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQ-RTHIFAAGDKSHSEIGKIEMF 1001
Query: 536 ARDL 539
DL
Sbjct: 1002 LEDL 1005
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 154/364 (42%), Gaps = 52/364 (14%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
GI + N I+D K VS Y+E + +V +++++ + +G+ +
Sbjct: 90 GIDSEGRLGNAIVDLYAKCAQVS-----YAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKV 144
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+ + I P+ T++I++ +E V + + MIK G++ + +L+D
Sbjct: 145 LRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDM 204
Query: 308 YCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
Y + ++ AR VF + V PN + + G K + +EA+ + E M E P+
Sbjct: 205 YAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN-------------------- 407
+ + ++I+ + GK+ +A L EM D++ +N
Sbjct: 261 HLAFVTVINTYIRLGKLKDARLLFGEM----SSPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 408 ---------------SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
S L A+ ++D G+ + + I G+ ++ + L+ KC
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+++ A +VF+ L +K N+ +N MI G G + + L M+ +G D TF
Sbjct: 377 KMEAAAKVFEALEEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 513 TIIS 516
+++S
Sbjct: 433 SLLS 436
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 36/369 (9%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N+++ V F ML + P I F ++ + K + + Q+ G + L
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 93 I-LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNT-LIKGLCLHGKLHRALQFHDDVL 150
I L+ + T A ++ + + P +I T ++ G +G AL+F+ ++
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSS----PKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTV---------VMYNTIID 201
G DQ T+ T++ +C + L LR EGR I + + NT+ID
Sbjct: 725 HDGVLPDQATFVTVLR-VC------SVLSSLR--EGRAIHSLIFHLAHDLDELTSNTLID 775
Query: 202 SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP 261
K + + ++ EM + NVV++++LI G+ G + A+ + D M +I P
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMP 832
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYSSLMDGYCLVNEVNKARDV 320
D +T+ ++ A GKV + + + +MI Q G++ V + ++D + +A D
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
A + + P+ + ++ ++ G C+I D + E+ EK+I + SS L
Sbjct: 893 IEA---QNLKPDARLWSSLL-GACRIHGDD----IRGEISAEKLIELEPQNSSAYVLLSN 944
Query: 381 TGKVSNAWE 389
WE
Sbjct: 945 IYASQGCWE 953
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
S+ + K GKV ++ L E + + T++ L + +V+ G + +I
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIF---PNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
G++ + L+D KC RI DA+ VF+ + + N + + +G K GL +EA
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIV----DPNTVCWTCLFSGYVKAGLPEEA 245
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ + +M D G D + F T+I+ G+ A L EM + D++
Sbjct: 246 VLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVV 293
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 185/441 (41%), Gaps = 32/441 (7%)
Query: 85 TPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK----GLCLHGKLH 140
TPN +I+ G + + ++LK P+ N+L+ L K++
Sbjct: 264 TPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNVNSHDLGYTLKVY 323
Query: 141 RALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLR---RIEGRGI-KPTVVMY 196
+ +Q D D +Y L+ C G+ + A ++ + R+E G+ K Y
Sbjct: 324 KNMQILD------VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTY 377
Query: 197 NTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL 256
TII K+ A + +M + G++PN T+S+LI G ++QA L +EM+
Sbjct: 378 CTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLA 437
Query: 257 KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP-----DVVTYSSLMDGYCLV 311
+P+ +NIL+ A + + A + V D+V+ L
Sbjct: 438 SGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILK 497
Query: 312 NE-----VNKARD--VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
N VN+ + A R P +YNI++ C L++EM +
Sbjct: 498 NNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYY-RGKELMDEMKSLGL 555
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIA 424
PN++T+S+LID +G V A +L MH G D++ Y + + + + +
Sbjct: 556 SPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFS 615
Query: 425 LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE---VFQDLFKKGYNLNNWTYNTMIN 481
L +++ I+P+ TYN LL K G + + ++ ++QD+ GY N+ +I
Sbjct: 616 LFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIE 675
Query: 482 GLCKEGLFDEALTLMSKMEDN 502
C EG+ E K+ D
Sbjct: 676 EWC-EGVIQENGQSQDKISDQ 695
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 160/407 (39%), Gaps = 45/407 (11%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ +L+ I P I N ++ V + + + + M+I +T + + NIL+ C
Sbjct: 289 IYEDLLKENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCC 346
Query: 100 YLGQTTSAFSVLANILKRGYHP----DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
G+ A + + D T+ T+IK AL+ DD+ + G
Sbjct: 347 LAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVT 406
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ T+++LI+ G E A L + G +P +N ++ + + AF L
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRL 466
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN----------------- 258
+ KG S N +Y IV + + + +LKN
Sbjct: 467 FQSW--KGSSVN-----ESLYADDIVSKGRTS----SPNILKNNGPGSLVNRNSNSPYIQ 515
Query: 259 ------IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVN 312
P TYNIL+ A G + K ++ M G+ P+ +T+S+L+D
Sbjct: 516 ASKRFCFKPTTATYNILLKACGTD--YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSG 573
Query: 313 EVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYS 372
+V A + M G P+V +Y I + K + A +L EEM +I PN VTY+
Sbjct: 574 DVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYN 633
Query: 373 SLIDGLCKTG---KVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+L+ K G +V + +M G + ++ C+G
Sbjct: 634 TLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEG 680
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+ F ML P FN +L + V+ Y A L + + + + + +I
Sbjct: 425 VEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDI 484
Query: 94 LINCHCYLGQTTSAFSVLANILKRG----------------------YHPDTITFNTLIK 131
+ G+T+S NILK + P T T+N L+K
Sbjct: 485 VSK-----GRTSSP-----NILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLK 534
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
+R + D++ + G +Q+T++TLI+ G E A+ +LR + G +P
Sbjct: 535 AC--GTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP 592
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQL---KQAI 248
VV Y T I + K + AF L+ EM I PN VTY+ L+ G L +Q +
Sbjct: 593 DVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCL 652
Query: 249 GLLDEMVLKNIDPD 262
+ +M P+
Sbjct: 653 AIYQDMRNAGYKPN 666
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 135/330 (40%), Gaps = 28/330 (8%)
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA----LGKEGKVR 280
+PN+ +I + G ++ + ++++ +NI P++ N L++ LG KV
Sbjct: 264 TPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNVNSHDLGYTLKVY 323
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP----NVQSY 336
KNM + V D+ +Y+ L+ CL V+ A+D++ R + + +Y
Sbjct: 324 --KNMQIL----DVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTY 377
Query: 337 NIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV 396
+I KM AL + ++M + PN T+SSLI G V A L +EM
Sbjct: 378 CTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLA 437
Query: 397 RGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRI-- 454
G + +N L A + D+ L + + + +I+ G I
Sbjct: 438 SGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILK 497
Query: 455 ---------KDAQEVFQDLFKK-GYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
+++ + K+ + TYN ++ C + LM +M+ G
Sbjct: 498 NNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYY-RGKELMDEMKSLGL 555
Query: 505 IHDPITFETIISALFEKGENDKAEKLLREM 534
+ IT+ T+I G+ + A ++LR M
Sbjct: 556 SPNQITWSTLIDMCGGSGDVEGAVRILRTM 585
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 366 PNKVTYSSLID--GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
PN ++ID GLC G + + +++ +I NS ++ H + +
Sbjct: 265 PNMYICRTMIDVCGLC--GDYVKSRYIYEDLLKENIKPNIYVINSLMNV--NSHDLGYTL 320
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN----LNNWTYNTM 479
+ K + + DM +YNILL C GR+ AQ+++++ + + L+ +TY T+
Sbjct: 321 KVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTI 380
Query: 480 INGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
I ++ AL + M+ G + T+ ++ISA G ++A L EM+A
Sbjct: 381 IKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLA 437
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 198/432 (45%), Gaps = 57/432 (13%)
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
N +I H + A +L +L+ G D + + ++K G + +Q H +
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
G D LI K G L L R++ R K V YN++ID K L+
Sbjct: 150 TGLWSDLFLQNCLIGLYLKCG----CLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
A +L+ M + N+++++++I G+ Q + + ++ + D++++N ++D
Sbjct: 206 ARELFDLMPME--MKNLISWNSMISGY---AQTSDGVDIASKLFADMPEKDLISWNSMID 260
Query: 272 ALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTP 331
K G++ +AK + VM ++ DVVT+++++DGY + V+ A+ +F+ M R
Sbjct: 261 GYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHR---- 312
Query: 332 NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK-IIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+V +YN M+ G + K EAL + +M+ E ++P+ T ++ + + G++S A
Sbjct: 313 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA--- 369
Query: 391 LDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCK 450
+MH+ I+ +L G+ALI D K
Sbjct: 370 -IDMHLY-----IVEKQFYLGG-------KLGVALI-------------------DMYSK 397
Query: 451 CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPIT 510
CG I+ A VF+ + K ++++W N MI GL GL + A ++ ++E D IT
Sbjct: 398 CGSIQHAMLVFEGIENK--SIDHW--NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 511 FETIISALFEKG 522
F +++A G
Sbjct: 454 FVGVLNACSHSG 465
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 187/412 (45%), Gaps = 29/412 (7%)
Query: 54 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
+ +N ++ VK +A L M + N ++ N +I+ + QT+ + +
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGY---AQTSDGVDIASK 242
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ D I++N++I G HG++ A D + + D VT+AT+I+G K+G
Sbjct: 243 LFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGF 298
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG-ISPNVVTYS 232
A L ++ R VV YN+++ + K A +++S+M + + P+ T
Sbjct: 299 VHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 354
Query: 233 ALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQ 292
++ +G+L +AI + +V K L+D K G ++ A +++ +
Sbjct: 355 IVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHA-----MLVFE 409
Query: 293 GVKPDVVTYSSLMDGYCLVNEVNK-ARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
G++ + + + M G ++ + + A D+ + R + P+ ++ ++ +V E
Sbjct: 410 GIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKE 469
Query: 352 ALNLLEEMDYE-KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
L E M + KI P Y ++D L ++G + A L++EM V +P D+I + +FL
Sbjct: 470 GLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPV--EPNDVI-WRTFL 526
Query: 411 DALCKGHHVDKGIALIKK--IIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
A C H + L+ K I+ G P +Y +L + G KD + V
Sbjct: 527 TA-CSHHKEFETGELVAKHLILQAGYNPS--SYVLLSNMYASFGMWKDVRRV 575
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
+ L +++ D+ + D +YN ++DG KCG I A+E+F + + NL +W N+MI+G
Sbjct: 172 LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISW--NSMISG 229
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ + + + SK+ + D I++ ++I + G + A+ L M RD++
Sbjct: 230 YAQT---SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV 284
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 191/444 (43%), Gaps = 28/444 (6%)
Query: 69 YSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNT 128
Y+ I R +++ N + I+ N Q S SV + PD TF
Sbjct: 10 YANPIFHIRHLKLESFLWNIIIRAIVHNVSS--PQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 129 LIKGLCLHGKLHRAL--QFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEG 186
L+ H LH L + H +L G D +L+N G +A R +
Sbjct: 68 LLPSF--HNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ---RVFDD 122
Query: 187 RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQ 246
G K + +N+++++ K L+ A L+ EM + NV+++S LI G+ + G+ K+
Sbjct: 123 SGSK-DLPAWNSVVNAYAKAGLIDDARKLFDEMPER----NVISWSCLINGYVMCGKYKE 177
Query: 247 AIGLLDEMVLKN-----IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTY 301
A+ L EM L + P+ T + ++ A G+ G + + K + A + K V+ D+V
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG 237
Query: 302 SSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-D 360
++L+D Y + +A+ VFNA+ G +V++Y+ MI L + DE L EM
Sbjct: 238 TALIDMYAKCGSLERAKRVFNAL---GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT 294
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM-HVRGQPADIITYNSFLDALCKGHHV 419
+ I PN VT+ ++ G ++ M G I Y +D + +
Sbjct: 295 SDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLI 354
Query: 420 DKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTM 479
+ + I + ++PD+ + LL G G IK + + L + +N+ Y +
Sbjct: 355 KEAESFIASM---PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELD-PMNSGAYVLL 410
Query: 480 INGLCKEGLFDEALTLMSKMEDNG 503
N K G + E + +ME G
Sbjct: 411 SNVYAKTGRWMEVKCIRHEMEVKG 434
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 194/409 (47%), Gaps = 37/409 (9%)
Query: 150 LAQGFQLDQV-----TYATLINGLCKMGQTEAALELLRRIE-GRGIKPTVVMYNTIIDSL 203
L FQL Y +I L K Q E +L +E ++ +I +
Sbjct: 59 LLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAY 118
Query: 204 CKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK----NI 259
+ A +++ ++ P+ T +AL+ ++ + +Q++ L+ E+++K +
Sbjct: 119 GFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLL---VLVRKRQSLELVPEILVKACRMGV 175
Query: 260 DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARD 319
+ T+ IL+DAL + G+V A ++ M + V D YS L+ C +K
Sbjct: 176 RLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVC----KHKDSS 231
Query: 320 VFNAMA------RRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
F+ + + +P ++ Y +++ L + E +++L +M +++ P+ V Y+
Sbjct: 232 CFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTI 291
Query: 374 LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKG 433
++ G+ A +L DE+ + G D+ TYN +++ LCK + ++ + ++ + G
Sbjct: 292 VLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 434 IQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING-------LCKE 486
+P++ TYNIL+ L K G + A+ +++++ G N N+ T++ MI+ +C
Sbjct: 352 SEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAH 411
Query: 487 GLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
GL +EA + ++ + E +IS L EKG D+A +LL ++
Sbjct: 412 GLLEEAFNMNVFVKSS-------RIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 196/456 (42%), Gaps = 80/456 (17%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGI--TPNFVTLNILINCHCYLGQTTSA 107
TP F V+ +L K+ S+ +E++ TP + ++ I + + G+ A
Sbjct: 71 TPQAYRF--VIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDV-IAAYGFSGRIEEA 127
Query: 108 FSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ----GFQLDQVTYAT 163
V I P T N L+ L + ++L+ ++L + G +L++ T+
Sbjct: 128 IEVFFKIPNFRCVPSAYTLNALLLVLV---RKRQSLELVPEILVKACRMGVRLEESTFGI 184
Query: 164 LINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKG 223
LI+ LC++G+ + A EL+R + + +Y+ ++ S+CK K S FD+
Sbjct: 185 LIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK-DSSCFDV-------- 235
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAK 283
IG L+++ P + Y +++ L + G+ +E
Sbjct: 236 ------------------------IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVV 271
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
++L M V+PD+V Y+ ++ G + KA +F+ + G+ P+V +YN+ I GL
Sbjct: 272 SVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGL 331
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
CK ++ AL ++ M+ PN VTY+ LI L K G +S A L EM G
Sbjct: 332 CKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNG----- 386
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
+ NS T++I++ + + A + ++
Sbjct: 387 VNRNSH------------------------------TFDIMISAYIEVDEVVCAHGLLEE 416
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
F + + +I+ LC++GL D+A+ L++ +
Sbjct: 417 AFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 2/237 (0%)
Query: 56 FNKVLTSLVKTKHYST--AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLAN 113
++++L+S+ K K S I + T +P +++ G+ SVL
Sbjct: 217 YSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQ 276
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+ PD + + +++G+ +A + D++L G D TY INGLCK
Sbjct: 277 MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND 336
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
E AL+++ + G +P VV YN +I +L K +S A L+ EM G++ N T+
Sbjct: 337 IEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDI 396
Query: 234 LIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
+I + V ++ A GLL+E N+ ++ L ++G + +A +LA ++
Sbjct: 397 MISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%)
Query: 36 DTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILI 95
+ VS N+M R+ P ++ + VL ++ + Y A L ++ + G+ P+ T N+ I
Sbjct: 269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI 328
Query: 96 NCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQ 155
N C A +++++ K G P+ +T+N LIK L G L RA ++ G
Sbjct: 329 NGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 388
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ T+ +I+ ++ + A LL + +I LC+ L+ A +L
Sbjct: 389 RNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVEL 448
Query: 216 YSEMI 220
+ ++
Sbjct: 449 LAHLV 453
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 17/214 (7%)
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV--DA 272
++ M + + Y+ +I+G C G+ +A + +++ + PDV TYN+++ +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
LG+ A+ + A MI++G+ PD +TY+S++ G C N++ +AR V+ +
Sbjct: 61 LGR------AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKS 105
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
++N +I G CK V + +NL EM I+ N +TY++LI G + G + A ++
Sbjct: 106 CSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALI 426
EM G + IT+ L LC + K +A++
Sbjct: 166 EMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 320 VFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLC 379
+F M + + YNI+I+GLCK DEA N+ + + P+ TY+ +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
+ + A +L EM RG D ITYNS + LCK + + + + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
T+N L++G CK R+KD +F +++++G N TY T+I+G + G F+ AL + +M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLL 531
NG ITF I+ L + E KA +L
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 156 LDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+D Y +I+GLCK G+ + A + + G++P V YN +I + + A L
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
Y+EMI +G+ P+ +TY+++I+G C +L QA + + T+N L++ K
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQS 335
+V++ N+ M ++G+ +V+TY++L+ G+ V + N A D+F M GV + +
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 336 YNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
+ ++ LC K + +A+ +L + ++ N VT
Sbjct: 179 FRDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 258 NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKA 317
N+D D YNI++ L K GK EA N+ ++ G++PDV TY+ ++ + + +A
Sbjct: 9 NMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRA 64
Query: 318 RDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
++ M RRG+ P+ +YN MI+GLCK + +A K+ + T+++LI+G
Sbjct: 65 EKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLING 115
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
CK +V + L EM+ RG A++ITY + + + + + + ++++ G+
Sbjct: 116 YCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 438 MCTYNILLDGLCKCGRIKDA 457
T+ +L LC ++ A
Sbjct: 176 SITFRDILPQLCSRKELRKA 195
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
NI+I+ C G+ A ++ N+L G PD T+N +I+ L RA + + +++
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMIR 73
Query: 152 QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSH 211
+G D +TY ++I+GLCK + A R + + +NT+I+ CK V
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKD 124
Query: 212 AFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+L+ EM +GI NV+TY+ LI+GF VG A+ + EMV + +T+ ++
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILP 184
Query: 272 ALGKEGKVREAKNML 286
L ++R+A ML
Sbjct: 185 QLCSRKELRKAVAML 199
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 196 YNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV 255
YN II LCK A ++++ ++ G+ P+V TY+ +I L +A L EM+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMI 72
Query: 256 LKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVN 315
+ + PD +TYN ++ L K+ K+ +A+ V T+++L++GYC V
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKATRVK 123
Query: 316 KARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLI 375
++F M RRG+ NV +Y +I+G ++ + AL++ +EM + + +T+ ++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 376 DGLCKTGKVSNAWELL 391
LC ++ A +L
Sbjct: 184 PQLCSRKELRKAVAML 199
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
M VM + + D Y+ ++ G C + ++A ++F + G+ P+VQ+YN+MI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII 404
+ + A L EM ++P+ +TY+S+I GLCK K++ A R
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 405 TYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
T+N+ ++ CK V G+ L ++ +GI ++ TY L+ G + G A ++FQ++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 465 FKKGYNLNNWTYNTMINGLCKEGLFDEALTLM 496
G ++ T+ ++ LC +A+ ++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 122 DTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL-EL 180
DT +N +I GLC GK A ++L G Q D TY +I +G+ E E+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKLYAEM 71
Query: 181 LRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
+R RG+ P + YN++I LCK ++ A+ +S + T++ LI G+C
Sbjct: 72 IR----RGLVPDTITYNSMIHGLCKQNKLAQ---------ARKVSKSCSTFNTLINGYCK 118
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
++K + L EM + I +V+TY L+ + G A ++ M+ GV +T
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 301 YSSLMDGYCLVNEVNKA 317
+ ++ C E+ KA
Sbjct: 179 FRDILPQLCSRKELRKA 195
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 13/166 (7%)
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
Y+ +I GLCK GK A + + + G D+ TYN + + + + L ++I
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+G+ PD TYN ++ GLCK ++ A++V + T+NT+ING CK
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSC---------STFNTLINGYCKATRVK 123
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+ + L +M G + + IT+ T+I + G+ + A + +EM++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 40 FFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHC 99
+ M++ + P I +N ++ L K + A +S+ T N LIN +C
Sbjct: 67 LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFNTLINGYC 117
Query: 100 YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQV 159
+ ++ + +RG + IT+ TLI G G + AL ++++ G +
Sbjct: 118 KATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSI 177
Query: 160 TYATLINGLCKMGQTEAALELL 181
T+ ++ LC + A+ +L
Sbjct: 178 TFRDILPQLCSRKELRKAVAML 199
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 207/466 (44%), Gaps = 19/466 (4%)
Query: 48 RITPP--IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTT 105
R++P + +N ++ + K + A+ ++ + ++P+ T +I L
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 106 SAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLI 165
V IL G+ D N L+ G L RA Q D++ + D V++ +LI
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLI 179
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
+G G E ALE+ ++ I P ++++ + + +V L+ + G++
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
VV + L+ + + A + DEM ++ D V+YN ++ K V E+ M
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLEMVEESVRM 295
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
+ Q KPD++T SS++ + +++ A+ ++N M + G NI+I K
Sbjct: 296 FLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
+ A ++ M+ + + V+++S+I G ++G + A +L M + + AD IT
Sbjct: 355 CGDMITARDVFNSMECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
Y + + + G L I GI D+ N L+D KCG + D+ ++F +
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITF 511
+ T+NT+I+ + G F L + ++M + + D TF
Sbjct: 471 TG----DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 114/524 (21%), Positives = 211/524 (40%), Gaps = 67/524 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
V+++V F L + P ++ + VL + + S A + M G NI
Sbjct: 289 VEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
LI+ + G +A V ++ + DT+++N++I G G L A++ ++
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVM----YNTIIDSLCKVKLV 209
Q D +TY LI+ ++ A L+ + + GIK + + N +ID K V
Sbjct: 404 EQADHITYLMLISVSTRL----ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEV 459
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY--- 266
+ ++S M + + VT++ +I G + + +M + PD+ T+
Sbjct: 460 GDSLKIFSSMG----TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 267 -----NILVDALGKE-----------GKVREAKNMLAVMIKQGV------------KPDV 298
++ LGKE +++ ++ + K G + DV
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
VT++ ++ Y + E KA + F M + G+ P+ + +IY +VDE L E+
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635
Query: 359 MD-YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
M + KI P Y+ ++D L ++ K+S A E + M ++ D + S L A
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIK---PDASIWASVLRACRTSG 692
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
++ + ++II+ + PD Y+IL R D + + K + N Y+
Sbjct: 693 DMETAERVSRRIIE--LNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
Query: 478 TMINGL-------------CKEGLFDEALTLMSKMEDNGCIHDP 508
+ G E ++ L S M G I DP
Sbjct: 751 WIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDP 794
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 48/258 (18%)
Query: 264 VTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNA 323
V+ + AL + E + + A++I G+ L+D Y E + VF
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF-- 62
Query: 324 MARRGVTP--NVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKT 381
R V+P NV +N +I K + EAL ++ K+ P+K T+ S+I
Sbjct: 63 ---RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKA---- 115
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG-HHVDKGIALIKKIIDKGIQPDMCT 440
C G + G + ++I+D G + D+
Sbjct: 116 --------------------------------CAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
N L+D + G + A++VF ++ + +L +W N++I+G G ++EAL + +++
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVR--DLVSW--NSLISGYSSHGYYEEALEIYHELK 199
Query: 501 DNGCIHDPITFETIISAL 518
++ + D T +++ A
Sbjct: 200 NSWIVPDSFTVSSVLPAF 217
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 138/259 (53%), Gaps = 5/259 (1%)
Query: 208 LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLK-NIDPDVVTY 266
+ HA L+ EM V +++AL+ + +L +A+ E+ K I PD+VTY
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 267 NILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR 326
N ++ AL ++G + + ++ + K G +PD++++++L++ + + +++ M
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
+ ++PN++SYN + GL + K +ALNL++ M E I P+ TY++LI +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI--QPDMCTYNIL 444
+ +EM +G D +TY + LCK +D+ + + ++ I + +P+M Y +
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPV 374
Query: 445 LDGLCKCGRIKDAQEVFQD 463
++ L G+I +A ++ ++
Sbjct: 375 VERLMGAGKIDEATQLVKN 393
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 5/326 (1%)
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL--YSEMIAKGISPNVVTY 231
T+ + R E + +Y+ I L + K S ++ Y + S + V
Sbjct: 68 TQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIR 127
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA-KNMLAVMI 290
L+YG+ G + A L DEM N + V ++N L+ A K+ EA K +
Sbjct: 128 IMLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPE 185
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K G+ PD+VTY++++ C ++ +F + + G P++ S+N ++ + ++
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
E + + M + + PN +Y+S + GL + K ++A L+D M G D+ TYN+ +
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Query: 411 DALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
A +++++ + ++ +KG+ PD TY +L+ LCK G + A EV ++ K
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLM 496
Y ++ L G DEA L+
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 9/266 (3%)
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQ-GFQLDQVTYATLINGLCKMGQTEAALELLRR 183
+FN L+ KL A++ ++ + G D VTY T+I LC+ G + L +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQ 243
+E G +P ++ +NT+++ + +L ++ M +K +SPN+ +Y++ + G +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 244 LKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSS 303
A+ L+D M + I PDV TYN L+ A + + E M ++G+ PD VTY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE---MD 360
L+ C ++++A +V + + Y ++ L +DEA L++
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQS 398
Query: 361 YEKIIPN-----KVTYSSLIDGLCKT 381
Y + +P+ K T SS + KT
Sbjct: 399 YFRYLPDLSAGKKKTTSSPVSSSAKT 424
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 128/260 (49%), Gaps = 1/260 (0%)
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR-GVTPN 332
G G A + M + + V ++++L+ Y ++++A F + + G+TP+
Sbjct: 133 GYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPD 192
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ +YN MI LC+ +D+ L++ EE++ P+ +++++L++ + + D
Sbjct: 193 LVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD 252
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
M + +I +YNS + L + + LI + +GI PD+ TYN L+
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
+++ + + ++ +KG + TY +I LCK+G D A+ + + + + P ++
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYK 372
Query: 513 TIISALFEKGENDKAEKLLR 532
++ L G+ D+A +L++
Sbjct: 373 PVVERLMGAGKIDEATQLVK 392
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 120/239 (50%), Gaps = 5/239 (2%)
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L+ GY + E A +F+ M V+S+N ++ K +DEA+ +E+ EK
Sbjct: 130 LLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELP-EK 186
Query: 364 --IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDK 421
I P+ VTY+++I LC+ G + + + +E+ G D+I++N+ L+ + +
Sbjct: 187 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVE 246
Query: 422 GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMIN 481
G + + K + P++ +YN + GL + + DA + + +G + + TYN +I
Sbjct: 247 GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALIT 306
Query: 482 GLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+ +E + ++M++ G D +T+ +I L +KG+ D+A ++ E I LL
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
++DD +S F + + P +I FN +L + + + + M+ ++PN + N
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+ + T A +++ + G PD T+N LI + L ++ ++++ +
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G D VTY LI LCK G + A+E+ + MY +++ L + A
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Query: 213 FDL 215
L
Sbjct: 388 TQL 390
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
M ++P I +N + L + K ++ A++L M+ GI+P+ T N LI +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
+ ++G PDT+T+ LI LC G L RA++ ++ + Y
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 164 LINGLCKMGQTEAALELLR 182
++ L G+ + A +L++
Sbjct: 374 VVERLMGAGKIDEATQLVK 392
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 192/450 (42%), Gaps = 99/450 (22%)
Query: 92 NILINCHCYLGQTTSAFSVLANILKRG-YHPDTITFNTLIKGLCLHGKLHRALQFHDDVL 150
N +I + Q +F++ ++ K + PD TF TL K L +++ LQ H +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 151 AQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
GF D +++ K G K+
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFG--------------------------------KMGCAR 133
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILV 270
+AFD EM + + V+++ALI G+ G+L A L D+M DVV YN ++
Sbjct: 134 NAFD---EMPHR----SEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMM 183
Query: 271 DALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVT 330
D K G + A+ + M + V+T+++++ GYC + +++ AR +F+AM R
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAMPER--- 236
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII-PNKVTYSSLIDGLCKTGKVSNAWE 389
N+ S+N MI G C+ K E + L +EM + P+ VT S++ + TG +S
Sbjct: 237 -NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS---- 291
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
L + H Q +K +DK ++ +CT +LD
Sbjct: 292 LGEWCHCFVQ---------------------------RKKLDKKVK--VCT--AILDMYS 320
Query: 450 KCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM--EDNGCIHD 507
KCG I+ A+ +F ++ +K + +W N MI+G G AL L M E+ D
Sbjct: 321 KCGEIEKAKRIFDEMPEK--QVASW--NAMIHGYALNGNARAALDLFVTMMIEEKP---D 373
Query: 508 PITFETIISALFEKG---ENDKAEKLLREM 534
IT +I+A G E K ++REM
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVMREM 403
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 86/142 (60%)
Query: 254 MVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNE 313
M+ +I P +TYN ++D K+ +V +AK ML M +G PDVVT+S+L++GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 314 VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSS 373
V+ ++F M RRG+ N +Y +I+G C++ +D A +LL EM + P+ +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 374 LIDGLCKTGKVSNAWELLDEMH 395
++ GLC ++ A+ +L+++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 85/141 (60%)
Query: 289 MIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKM 348
M++ + P +TY+S++DG+C + V+ A+ + ++MA +G +P+V +++ +I G CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 349 VDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNS 408
VD + + EM I+ N VTY++LI G C+ G + A +LL+EM G D IT++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 409 FLDALCKGHHVDKGIALIKKI 429
L LC + K A+++ +
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%)
Query: 324 MARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK 383
M R + P +YN MI G CK VD+A +L+ M + P+ VT+S+LI+G CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 384 VSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI 443
V N E+ EMH RG A+ +TY + + C+ +D L+ ++I G+ PD T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 444 LLDGLCKCGRIKDAQEVFQDLFK 466
+L GLC ++ A + +DL K
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 81/134 (60%)
Query: 159 VTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSE 218
+TY ++I+G CK + + A +L + +G P VV ++T+I+ CK K V + +++ E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M +GI N VTY+ LI+GFC VG L A LL+EM+ + PD +T++ ++ L + +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 279 VREAKNMLAVMIKQ 292
+R+A +L + K
Sbjct: 131 LRKAFAILEDLQKS 144
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 83/141 (58%)
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ 173
+L+ P TIT+N++I G C ++ A + D + ++G D VT++TLING CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 174 TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSA 233
+ +E+ + RGI V Y T+I C+V + A DL +EMI+ G++P+ +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 234 LIYGFCIVGQLKQAIGLLDEM 254
++ G C +L++A +L+++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 83/141 (58%)
Query: 219 MIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
M+ I P +TY+++I GFC ++ A +LD M K PDVVT++ L++ K +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
V + M ++G+ + VTY++L+ G+C V +++ A+D+ N M GV P+ +++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 339 MIYGLCKIKMVDEALNLLEEM 359
M+ GLC K + +A +LE++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%)
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
ITYNS +D CK VD ++ + KG PD+ T++ L++G CK R+ + E+F +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ ++G N TY T+I+G C+ G D A L+++M G D ITF +++ L K E
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 524 NDKAEKLLREM 534
KA +L ++
Sbjct: 131 LRKAFAILEDL 141
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%)
Query: 188 GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA 247
I PT + YN++ID CK V A + M +KG SP+VVT+S LI G+C ++
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 248 IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDG 307
+ + EM + I + VTY L+ + G + A+++L MI GV PD +T+ ++ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 308 YCLVNEVNKA 317
C E+ KA
Sbjct: 125 LCSKKELRKA 134
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 77/137 (56%)
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
I P +TY+S+IDG CK +V +A +LD M +G D++T+++ ++ CK VD G+
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+ ++ +GI + TY L+ G C+ G + AQ++ ++ G + T++ M+ GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 484 CKEGLFDEALTLMSKME 500
C + +A ++ ++
Sbjct: 126 CSKKELRKAFAILEDLQ 142
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 73/137 (53%)
Query: 83 GITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRA 142
I P +T N +I+ C + A +L ++ +G PD +TF+TLI G C ++
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 143 LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS 202
++ ++ +G + VTY TLI+G C++G +AA +LL + G+ P + ++ ++
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 203 LCKVKLVSHAFDLYSEM 219
LC K + AF + ++
Sbjct: 125 LCSKKELRKAFAILEDL 141
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
I P TYN ++DG CK R+ DA+ + + KG + + T++T+ING CK D
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+ + +M G + + +T+ T+I + G+ D A+ LL EMI+
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 108
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 44 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQ 103
ML+ I P I +N ++ K A + M G +P+ VT + LIN +C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 104 TTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
+ + + +RG +T+T+ TLI G C G L A +++++ G D +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 164 LINGLCKMGQTEAALELLRRIE 185
++ GLC + A +L ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
VDD + M +P ++ F+ ++ K K + + +M GI N VT
Sbjct: 26 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 85
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
LI+ C +G +A +L ++ G PD ITF+ ++ GLC +L +A +D+
Sbjct: 86 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 22/382 (5%)
Query: 157 DQVTYATLINGLCK-MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
+ ++ +I GL EAAL L RR++ G+KP YN + + K++ + +
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 216 YSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGK 275
+S + G+ +V +LI + GQ+ A L DE+ + D V++N ++ +
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEIT----ERDTVSWNSMISGYSE 210
Query: 276 EGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMA---RRGVTPN 332
G ++A ++ M ++G +PD T S++ + ++ R + MA + G++
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIGLSTF 269
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
+ S I +YG C +D A + +M I ++V ++++I + GK S A++L
Sbjct: 270 LGSKLISMYGKCGD--LDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCG 452
EM G D T ++ L A ++ G + + +Q ++ L+D KCG
Sbjct: 324 EMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCG 383
Query: 453 RIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFE 512
R+++A VF+ + K N T+N MI +G EAL L +M ITF
Sbjct: 384 RVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFI 436
Query: 513 TIISALFEKGENDKAEKLLREM 534
++SA G + + EM
Sbjct: 437 GVLSACVHAGLVHQGCRYFHEM 458
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/482 (21%), Positives = 195/482 (40%), Gaps = 33/482 (6%)
Query: 35 DDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNIL 94
+ +S + RM + P +N V + K + S+ + G+ + + L
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 95 INCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF 154
I + GQ A + I +R DT+++N++I G G A+ + +GF
Sbjct: 174 IMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGF 229
Query: 155 QLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFD 214
+ D+ T +++ +G L + I + + + +I K + A
Sbjct: 230 EPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARR 289
Query: 215 LYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALG 274
++++MI K + V ++A+I + G+ +A L EM + PD T + ++ A G
Sbjct: 290 VFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 345
Query: 275 KEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQ 334
G + K + + ++ ++ + L+D Y V +A VF AM N
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP----VKNEA 401
Query: 335 SYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEM 394
++N MI EAL L + M + P+ +T+ ++ G V EM
Sbjct: 402 TWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEM 458
Query: 395 -HVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG-LCKCG 452
+ G I Y + +D L + +D+ +++ K PD I+L L C
Sbjct: 459 SSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK---PD----EIMLAAILGACH 511
Query: 453 RIKD------AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
+ KD A + ++ K+ N N+ ++ N L ++DE+ + + M D G +
Sbjct: 512 KRKDVAIREKAMRMLMEM-KEAKNAGNYVISS--NVLADMKMWDESAKMRALMRDRGVVK 568
Query: 507 DP 508
P
Sbjct: 569 TP 570
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 220/502 (43%), Gaps = 52/502 (10%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNI 93
+D + F+ M +I+P + F+ VL+ + L + ++G+ N
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 94 LINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG 153
L++ + G+ A S L ++ R DT+T+N +I G G + +L F ++++ G
Sbjct: 280 LLSMYSKCGRFDDA-SKLFRMMSRA---DTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 154 FQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF 213
D +T+++L+ + K E ++ I I + + + +ID+ K + VS A
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+++S+ S +VV ++A+I G+ G ++ + +V I P+ +T ++ +
Sbjct: 396 NIFSQCN----SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 274 GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNV 333
G ++ + + +IK+G +++D Y +N A ++F +++R +
Sbjct: 452 GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDI---- 507
Query: 334 QSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDE 393
V+++S+I ++ S A ++ +
Sbjct: 508 -----------------------------------VSWNSMITRCAQSDNPSAAIDIFRQ 532
Query: 394 MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR 453
M V G D ++ ++ L A G A+ +I + D+ + + L+D KCG
Sbjct: 533 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGN 592
Query: 454 IKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM-EDNGCIHDPITFE 512
+K A VF+ + +K N+ +W N++I G ++L L +M E +G D ITF
Sbjct: 593 LKAAMNVFKTMKEK--NIVSW--NSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFL 648
Query: 513 TIISALFEKGENDKAEKLLREM 534
IIS+ G+ D+ + R M
Sbjct: 649 EIISSCCHVGDVDEGVRFFRSM 670
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/403 (18%), Positives = 176/403 (43%), Gaps = 26/403 (6%)
Query: 139 LHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNT 198
L + Q H ++ D T ++ G ++ R++ R + ++ +N+
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR--RSSIRPWNS 108
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKN 258
II S + L++ A Y +M+ G+SP+V T+ L+ + K L D +
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 259 IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKAR 318
+D + + L+ A + GK+ ++ + + + ++ D V ++ +++GY ++
Sbjct: 169 MDCNEFVASSLIKAYLEYGKI----DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE------ALNLLEEMDYEKIIPNKVTYS 372
F+ M ++PN +++ ++ +C K++ + L ++ +D+E I N
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVL-SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN----- 278
Query: 373 SLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDK 432
SL+ K G+ +A +L M AD +T+N + + +++ + ++I
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMM----SRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 433 GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEA 492
G+ PD T++ LL + K ++ +++ + + +L+ + + +I+ K A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 493 LTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+ S+ D + F +IS G + ++ R ++
Sbjct: 395 QNIFSQCNSV----DVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 129/319 (40%), Gaps = 20/319 (6%)
Query: 220 IAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+AK +P + Y + L+ + L+E + + + ++L+ A +
Sbjct: 6 VAKRFAPAIAPYKKSL-------PLRNSSRFLEETIPRRL-------SLLLQACSNPNLL 51
Query: 280 REAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIM 339
R+ K + A +I + D T ++ Y + + +F + R +++ +N +
Sbjct: 52 RQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR--RSSIRPWNSI 109
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
I + ++++AL +M + P+ T+ L+ L D + G
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE 459
+ +S + A + +D + K+ D+ +Q D +N++L+G KCG + +
Sbjct: 170 DCNEFVASSLIKAYLEYGKID----VPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 460 VFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALF 519
F + + N T++ +++ + L D + L + +G + +++S
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 520 EKGENDKAEKLLREMIARD 538
+ G D A KL R M D
Sbjct: 286 KCGRFDDASKLFRMMSRAD 304
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 121/542 (22%), Positives = 211/542 (38%), Gaps = 92/542 (16%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGIT-PNFVTL 91
+ VS + Q I P +L TK + R ++ITG PN +
Sbjct: 26 ELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLS 85
Query: 92 NILINCHCYLGQTTSAFSVLANILKR----------GY-----------------HPDTI 124
N LI + G+ A V + R GY D +
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 125 TFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRI 184
++NT++ G G LH AL F+ + G + ++ ++A L+ K Q L+L R+
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ----LQLNRQA 201
Query: 185 EGR----GIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCI 240
G+ G VV+ +IID+ K + A + EM K I ++ LI G+
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGYAK 257
Query: 241 VGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVT 300
+G ++ A L EM KN V++ L+ ++G A ++ MI GVKP+ T
Sbjct: 258 LGDMEAAEKLFCEMPEKN----PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
+SS + + + +++ M R V PN
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNA--------------------------- 346
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNA---WELLDEMHVRGQPADIITYNSFLDALCKGH 417
+ SSLID K+G + + + + D+ H D + +N+ + AL +
Sbjct: 347 --------IVISSLIDMYSKSGSLEASERVFRICDDKH------DCVFWNTMISALAQHG 392
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL-FKKGYNLNNWTY 476
K + ++ +I +QP+ T ++L+ G +++ F+ + + G + Y
Sbjct: 393 LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
+I+ L + G F E LM K+E+ D + I+ G + +K E+I
Sbjct: 453 ACLIDLLGRAGCFKE---LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK 509
Query: 537 RD 538
D
Sbjct: 510 LD 511
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 119/537 (22%), Positives = 216/537 (40%), Gaps = 58/537 (10%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEF--NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTL 91
VD+ F++M P EF N ++ + ++ S A L R + N ++
Sbjct: 44 VDEARQMFDKM------PERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPV----KNTISW 93
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
N LI+ +C G AF++ + G P+ T ++++ L R Q H +
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 152 QGFQLD--------------------------------QVTYATLINGLCKMGQTEAALE 179
GF LD VT+ +++ G + G A+E
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 180 LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFC 239
R + G + + +++ + V ++ ++ G N+ SALI +
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
+++ A LL+ M +D DVV++N ++ ++G + EA +M M ++ +K D
Sbjct: 274 KCREMESARALLEGM---EVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 300 TYSSLMDGYCLV-NEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
T S+++ + L E+ A + + G N ++ K ++D AL + E
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHH 418
M I + +++++L+ G G A +L M V G D I S L A +
Sbjct: 390 M----IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 419 VDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNT 478
++ G + I G + N L+ KCG ++DA +F + + +L WT
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR--DLITWT--C 501
Query: 479 MINGLCKEGLFDEALTLMSKMED-NGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+I G K GL ++A M G P + +I G+ K E+LL +M
Sbjct: 502 LIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 17/323 (5%)
Query: 197 NTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVL 256
N ++ L K V A ++ +M + + T++ +I + +L A L +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLFRSNPV 87
Query: 257 KNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNK 316
KN +++N L+ K G EA N+ M G+KP+ T S++ + + +
Sbjct: 88 KN----TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR 143
Query: 317 ARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID 376
+ + G +V N ++ + K + EA L E M+ EK N VT++S++
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK---NNVTWTSMLT 200
Query: 377 GLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQP 436
G + G A E ++ G ++ T+ S L A G+ + I+ G +
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 437 DMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN-WTYNTMINGLCKEGLFDEALTL 495
++ + L+D KC ++ A+ + + G +++ ++N+MI G ++GL EAL++
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLE-----GMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 496 MSKMEDNGCIHDPITFETIISAL 518
+M + D T +I++
Sbjct: 316 FGRMHERDMKIDDFTIPSILNCF 338
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 159/343 (46%), Gaps = 18/343 (5%)
Query: 199 IIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM--VL 256
I D++ + A+ YS+ K P Y+ +I F GQ K + DE+ V+
Sbjct: 68 IFDNVKDPSFLLPAYQHYSK--RKDYQPTESLYALMINKF---GQAK----MYDEIEEVM 118
Query: 257 KNID-------PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC 309
+ I + YN++ G++ A +L M G P +++ +++
Sbjct: 119 RTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLV 178
Query: 310 LVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKV 369
++ +F + + GV + NI+I GLC+ ++ AL LL+E +K PN +
Sbjct: 179 SAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVM 238
Query: 370 TYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKI 429
T+S LI G C GK A++LL+ M D IT+N + L K V++GI L++++
Sbjct: 239 TFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERM 298
Query: 430 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 489
KG +P+ TY +L GL R +A+E+ + G + +Y M+ GLC+
Sbjct: 299 KVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Query: 490 DEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
E ++ +M ++G + + + ++ + K +D L R
Sbjct: 359 VEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQANLDR 401
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 120/241 (49%)
Query: 135 LHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVV 194
L G+++RA++ + G ++ ++N L + ++ G++
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 195 MYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEM 254
N +I LC+ + A L E + PNV+T+S LI GFC G+ ++A LL+ M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 255 VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEV 314
+ I+PD +T+NIL+ L K+G+V E ++L M +G +P+ TY ++ G
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 315 NKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
+A+++ + M G+ P+ SY M+ GLC+ K V E +L +M +P + + +
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKV 383
Query: 375 I 375
+
Sbjct: 384 V 384
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
AI + M G P+ + N ++N + + K G D N LIK
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
GLC G L ALQ D+ Q + + +T++ LI G C G+ E A +LL R+E I+P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
+ +N +I L K V DL M KG PN TY ++YG + +A ++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 252 DEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLV 311
+M+ + P ++Y +V L + V E +L M+ G P + + ++ C+V
Sbjct: 331 SQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ--CVV 388
Query: 312 NEVN 315
++ N
Sbjct: 389 SKNN 392
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%)
Query: 172 GQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTY 231
G+ A+E+L + G P+ +N I++ L KL ++ G+ +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
+ LI G C G L+ A+ LLDE + P+V+T++ L+ +GK EA +L M K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
+ ++PD +T++ L+ G V + D+ M +G PN +Y ++YGL K E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
A ++ +M + P+ ++Y ++ GLC+T V
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
P FN +L LV K + + G+ + LNILI C G +A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
L ++ P+ +TF+ LI+G C GK A + + + + + D +T+ LI+GL K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 171 MGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
G+ E ++LL R++ +G +P Y ++ L K A ++ S+MI+ G+ P+ ++
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
Y ++ G C + + +L +MV P + +
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 137/281 (48%), Gaps = 2/281 (0%)
Query: 257 KNIDPDVVTYNILVDALGKEGKVREAKN-MLAVMIKQGVKPDVVTYSSLMDGYC-LVNEV 314
K+ P Y ++++ G+ E + M + +++ + + +LM Y L +
Sbjct: 89 KDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRI 148
Query: 315 NKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSL 374
N+A ++ M G P+ +S+N ++ L K+ DE + + + + L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 375 IDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGI 434
I GLC++G + A +LLDE + +++T++ + C ++ L++++ + I
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 435 QPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALT 494
+PD T+NIL+ GL K GR+++ ++ + + KG N TY ++ GL + EA
Sbjct: 269 EPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKE 328
Query: 495 LMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
+MS+M G ++++ ++ L E + + +LR+M+
Sbjct: 329 MMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMV 369
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ + + Q + P ++ F+ ++ + A L +ME I P+ +T N
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
ILI+ G+ +L + +G P+ T+ ++ GL + A + +++
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALEL---LRRIEGRGIKPTVVMYNTII 200
G + ++Y ++ GLC +T++ +E+ LR++ G P +M+ ++
Sbjct: 337 GMRPSFLSYKKMVLGLC---ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 167/338 (49%), Gaps = 42/338 (12%)
Query: 180 LLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFC 239
LLRR I P N I L ++ + A L+ +K IS ++++++ G+
Sbjct: 6 LLRRTYSTTIPPPTA--NVRITHLSRIGKIHEARKLFDSCDSKSIS----SWNSMVAGYF 59
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
+ A L DEM +NI +++N LV K G++ EA+ + +M ++ +VV
Sbjct: 60 ANLMPRDARKLFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPER----NVV 111
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
++++L+ GY +V+ A +F M + N S+ +M+ G + +D+A L E
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYE-- 165
Query: 360 DYEKIIPNK--VTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGH 417
+IP+K + +S+I GLCK G+V A E+ DEM R +IT+ + + + +
Sbjct: 166 ----MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS----VITWTTMVTGYGQNN 217
Query: 418 HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
VD +KI D + ++ +L G + GRI+DA+E+F+ + K N
Sbjct: 218 RVDDA----RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI----ACN 269
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETII 515
MI+GL ++G +A + M++ + +++T+I
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKE----RNDASWQTVI 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
+ ++++AR +F++ + ++ S+N M+ G M +A L +EM II +
Sbjct: 30 IGKIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEMPDRNII----S 81
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
++ L+ G K G++ A ++ D M R +++++ + + VD +L K+
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 431 DKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFD 490
+K + ++ ++L G + GRI DA ++++ + K +N +MI+GLCKEG D
Sbjct: 138 EK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVD 189
Query: 491 EALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
EA + +M + IT+ T+++ + D A K+
Sbjct: 190 EAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIF 226
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/412 (18%), Positives = 181/412 (43%), Gaps = 59/412 (14%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N V+ L+ + + G+ A S+ + ++ + +++ ++ G G++ A + +
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
+ + + D + ++I+GLCK G+ + A E+ + R +V+ + T++ +
Sbjct: 165 EMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQN 216
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
V A ++ M K V++++++ G+ G+++ A L + M +K V+
Sbjct: 217 NRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIAC 268
Query: 267 NILVDALGKEGKVREAK-------------------------------NMLAVMIKQGVK 295
N ++ LG++G++ +A+ ++ +M KQGV+
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
P T S++ + ++ + V + R +V ++++ K + ++ +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG--QPADIITYNSFLDAL 413
+ + II ++S+I G G A ++ EM + G +P + +T+ + L A
Sbjct: 389 FDRFPSKDII----MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE-VTFVATLSAC 443
Query: 414 CKGHHVDKGIALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
V++G+ + + + G++P Y ++D L + GR +A E+ +
Sbjct: 444 SYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM 495
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 198/460 (43%), Gaps = 33/460 (7%)
Query: 12 FLSNPNXXXXXXXXXXXXXXXNVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYST 71
F NPN N + ++ M++ R++P F ++ + S+
Sbjct: 94 FTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKA-------SS 144
Query: 72 AISLSRQMEITGITPNFVTL-NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLI 130
+S +Q+ I ++L N L N F V + R HPD +FN +I
Sbjct: 145 FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMI 204
Query: 131 KGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRG-- 188
G G AL+ + +++ G + D+ T +L+ + + IE RG
Sbjct: 205 VGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPV 264
Query: 189 IKPTVVMYNTIIDSLCKVK---LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLK 245
+++ N ++D K K L AFD + ++ +++ ++ GF +G ++
Sbjct: 265 YSSNLILSNALLDMYFKCKESGLAKRAFDAMKK-------KDMRSWNTMVVGFVRLGDME 317
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEG-KVREAKNMLAVM-IKQGVKPDVVTYSS 303
A + D+M + D+V++N L+ K+G R + + M I + VKPD VT S
Sbjct: 318 AAQAVFDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 304 LMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEK 363
L+ G E++ R V + R + + + +I CK +++ A + + +
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKD 433
Query: 364 IIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGI 423
+ ++S+I GL G A +L M G + +T + L A V++G+
Sbjct: 434 V----ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGL 489
Query: 424 ALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
+ + DK G P+ Y L+D LC+ GR+++A+++ Q
Sbjct: 490 HVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 165/400 (41%), Gaps = 82/400 (20%)
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQA--- 247
P V +YNT+I ++ K + F LYS MI +SP+ T+ L+ + ++KQ
Sbjct: 98 PNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCH 155
Query: 248 --------------------------IGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
G+ +++ + PDV ++N+++ K+G E
Sbjct: 156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE 215
Query: 282 AKNMLAVMIKQGVKPDVVT------------------------------YSS-------L 304
A + M+ G++PD T YSS L
Sbjct: 216 ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNAL 275
Query: 305 MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
+D Y E A+ F+AM ++ +++S+N M+ G ++ ++ A + ++M +
Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKK----DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDL 331
Query: 365 IPNKVTYSSLIDGLCKTG-KVSNAWELLDEMH-VRGQPADIITYNSFLDALCKGHHVDKG 422
V+++SL+ G K G EL EM V D +T S + + G
Sbjct: 332 ----VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 423 IALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMING 482
+ +I ++ D + L+D CKCG I+ A VF+ +K L WT +MI G
Sbjct: 388 RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVAL--WT--SMITG 443
Query: 483 LCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
L G +AL L +M++ G + +T +++A G
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 5/328 (1%)
Query: 160 TYATLINGLCKMGQTEAALELLRRIEGRGIKPT--VVMYNTIIDSLCKVKLVSHAFDLYS 217
+ + L+ + K G E LE ++E + V +N ++ + C + + A ++
Sbjct: 141 SMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFE 200
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
++ ++ +P+V T + L+ GF G + EMV + P+ VTY I +D K+
Sbjct: 201 KLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKR 259
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
EA + M + V ++L+ G + KAR +F+ +++RG+TP+ +YN
Sbjct: 260 NFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYN 319
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGK--VSNAWELLDEMH 395
++ L K V A+ +++EM+ + I P+ VT+ S+ G+ K+ + + E +M
Sbjct: 320 ALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMK 379
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
R T + C V+ G+ L K +++KG P +L LC R
Sbjct: 380 ERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRAN 439
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGL 483
DA E ++G ++ Y + L
Sbjct: 440 DAFECSWQTVERGRCVSEPVYRMLETSL 467
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 163/364 (44%), Gaps = 21/364 (5%)
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
L +M + A L+ + R P ++ + ++ LCK+ F Y E + +
Sbjct: 113 LARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIA----KFGSYEETLEAFVKME 166
Query: 228 ---------VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGK 278
V ++ L+ FC ++K+A + +++ + +PDV T NIL+ + G
Sbjct: 167 KEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGD 225
Query: 279 VREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
V + M+K+G KP+ VTY +DG+C +A +F M R VQ
Sbjct: 226 VTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTT 285
Query: 339 MIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRG 398
+I+G + +A L +E+ + P+ Y++L+ L K G VS A +++ EM +G
Sbjct: 286 LIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
Query: 399 QPADIITYNSFLDALCKGHHVD-KGIA-LIKKIIDKGIQPDMCTYNILLDGLCKCGRIKD 456
D +T++S + K G+ +K+ ++ + P T +L+ C G +
Sbjct: 346 IEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNL 405
Query: 457 AQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG-CIHDPI--TFET 513
++++ + +KGY + + LC ++A + + G C+ +P+ ET
Sbjct: 406 GLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLET 465
Query: 514 IISA 517
+S+
Sbjct: 466 SLSS 469
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 34/300 (11%)
Query: 55 EFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANI 114
EFN +L + + A S+ ++ + P+ T+NIL+ G T+ +
Sbjct: 178 EFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYHEM 236
Query: 115 LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT 174
+KRG+ P+++T+ I G C AL+ +D+ F + TLI+G
Sbjct: 237 VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
A +L I RG+ P YN ++ SL K VS A + EM KGI P+ VT+ ++
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
+G +K +N + + K M ++ +
Sbjct: 357 -----FIGMMKS---------------KEFGFNGVCEYYQK-------------MKERSL 383
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALN 354
P T LM +C EVN D++ M +G P+ + ++ LC + ++A
Sbjct: 384 VPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFE 443
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 18/303 (5%)
Query: 246 QAIGLLDEMVLKNIDPDVVTY---NILVDALGKEGKVREAKNMLAVMIKQGVKPD--VVT 300
QA L+ E ++ P+++++ +IL+ + K G E M K+ + V
Sbjct: 121 QAWALMAE--VRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE 178
Query: 301 YSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
++ L+ +C E+ +AR +F + R P+V++ NI++ G + V EM
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
PN VTY IDG CK A L ++M D L L G V
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDM----DRLDFDITVQILTTLIHGSGVA 293
Query: 421 ----KGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
K L +I +G+ PD YN L+ L KCG + A +V +++ +KG ++ T+
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 477 NTMINGL--CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
++M G+ KE F+ KM++ + T ++ GE + L + M
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 535 IAR 537
+ +
Sbjct: 414 LEK 416
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 83/209 (39%), Gaps = 2/209 (0%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V T F++ M++ P + + + K +++ A+ L M+ L
Sbjct: 225 DVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILT 284
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
LI+ A + I KRG PD +N L+ L G + A++ ++ +
Sbjct: 285 TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 153 GFQLDQVTYATLINGLCKMGQ--TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
G + D VT+ ++ G+ K + E ++++ R + P ++ C V+
Sbjct: 345 GIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Query: 211 HAFDLYSEMIAKGISPNVVTYSALIYGFC 239
DL+ M+ KG P+ L C
Sbjct: 405 LGLDLWKYMLEKGYCPHGHALELLTTALC 433
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 171/373 (45%), Gaps = 23/373 (6%)
Query: 119 YHPD-TITFNTLIKGLCLHGKLHRALQFHD---DVLAQGFQLDQVTYATLINGLCKMGQT 174
+HPD T T T K L + G F + ++ +G D+ T+ ++ L +
Sbjct: 104 HHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASAREL 162
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
+ + + G G V N +++LCK KLV A ++ ++ + I P+ +TY +
Sbjct: 163 KKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTM 221
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI-KQG 293
I GFC VG L +A L + M+ + D D+ +++ L K+ + EA + VM+ K+G
Sbjct: 222 IQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRG 281
Query: 294 VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEAL 353
D Y ++D C ++ AR VF+ M RGV + ++ +IYGL + V EA
Sbjct: 282 GDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAY 341
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
L+E ++ P+ Y LI GL K + S A E+ +M RG + TY L
Sbjct: 342 GLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYL----ML 393
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
+GH +G KG P + I + G+ K G+ + + + K+G +
Sbjct: 394 LQGHLGRRG--------RKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPR 445
Query: 474 WTYNTMINGLCKE 486
+ Y+ ++ E
Sbjct: 446 FDYSKFLHYYSNE 458
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 125/248 (50%), Gaps = 7/248 (2%)
Query: 291 KQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVD 350
K+G+ D T+ ++ E+ K + F+ M G NV++ N + LCK K+V+
Sbjct: 140 KRGLVNDK-TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVE 198
Query: 351 EALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFL 410
EA + ++ E I P+++TY ++I G C G + A +L + M G DI +
Sbjct: 199 EAKFVFIKLK-EFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIM 257
Query: 411 DALCKGHHVDKGIALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGY 469
+ L K + D+ + ++ K G D Y +++D LCK GRI A++VF ++ ++G
Sbjct: 258 ETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGV 317
Query: 470 NLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK 529
++N T+ ++I GL + EA L+ +E+ D + +I L + +A +
Sbjct: 318 YVDNLTWASLIYGLLVKRRVVEAYGLVEGVENP----DISIYHGLIKGLVKIKRASEATE 373
Query: 530 LLREMIAR 537
+ R+MI R
Sbjct: 374 VFRKMIQR 381
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 18/291 (6%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
F VL +L + ++ M G N T+N + C A V L
Sbjct: 149 FRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIK-L 207
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQ-T 174
K PD IT+ T+I+G C G L A + + ++ +GF +D ++ L K Q
Sbjct: 208 KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFD 267
Query: 175 EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
EA+ + RG Y +ID LCK + A ++ EM +G+ + +T+++L
Sbjct: 268 EASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASL 327
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
IYG + ++ +A GL++ + +PD+ Y+ L+ L K + EA + MI++G
Sbjct: 328 IYGLLVKRRVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGC 383
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
+P + TY L+ G+ R+G P V I + G+ K
Sbjct: 384 EPIMHTYLMLLQGH------------LGRRGRKGPDPLVNFDTIFVGGMIK 422
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 103 QTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYA 162
+ + F V+ + KRG D + +I LC +G++ A + D++ +G +D +T+A
Sbjct: 268 EASKVFYVMVS--KRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWA 325
Query: 163 TLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
+LI GL + A L+ +E P + +Y+ +I L K+K S A +++ +MI +
Sbjct: 326 SLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQR 381
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
G P + TY L+ G L K DP V I V + K GK E
Sbjct: 382 GCEPIMHTYLMLLQGH------------LGRRGRKGPDPLVNFDTIFVGGMIKAGKRLET 429
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYC 309
+ +K+G++ YS + Y
Sbjct: 430 TKYIERTLKRGLEVPRFDYSKFLHYYS 456
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 389 ELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGL 448
EL EM RG + +TY + + L + D + K+++ G+ PD+ TYNILLDGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 449 CK---------CGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
CK G+++D ++F L KG N TY TMI+G CK+G +EA TL KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+++G + D T+ T+I A G+ + +L++EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 250 LLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYC 309
L EM + + + VTY L+ L + G A+ + M+ GV PD++TY+ L+DG C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 310 ---------LVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMD 360
+ +V D+F +++ +GV PNV +Y MI G CK +EA L +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 361 YEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVD 420
+ +P+ TY++LI + G + + EL+ EM D TY D L G +D
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG-RLD 181
Query: 421 KGI 423
KG
Sbjct: 182 KGF 184
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 214 DLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+L+ EM +G+ N VTY+ LI G G A + EMV + PD++TYNIL+D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 274 GKE---------GKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
K GKV + ++ + +GVKP+VVTY++++ G+C +A +F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 325 ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLID 376
G P+ +YN +I + + L++EM + + TY + D
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 353 LNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDA 412
+ L EM ++ N VTY++LI GL + G A E+ EM G P DI+TYN LD
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 413 LCKGHHVDK---------GIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
LCK ++K G L + KG++P++ TY ++ G CK G ++A +F+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGE 523
+ + G ++ TYNT+I ++G + L+ +M D T+ +++ + G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGR 179
Query: 524 NDKA 527
DK
Sbjct: 180 LDKG 183
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 143 LQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDS 202
++ ++ +G + VTY TLI GL + G + A E+ + + G+ P ++ YN ++D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 203 LCK---------VKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDE 253
LCK V +DL+ + KG+ PNVVTY+ +I GFC G ++A L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 254 MVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMD 306
M PD TYN L+ A ++G + ++ M D TY + D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 319 DVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL 378
++F M++RG+ N +Y +I GL + D A + +EM + + P+ +TY+ L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 379 CK---------TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKI 429
CK GKV + W+L + ++G +++TY + + CK ++ L +K+
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 430 IDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLF 489
+ G PD TYN L+ + G + E+ +++ + + TY ++ + +G
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRL 180
Query: 490 DEALTLM 496
D+ M
Sbjct: 181 DKGFLEM 187
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+RG +T+T+ TLI+GL G A + ++++ G D +TY L++GLCK G+ E
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE 68
Query: 176 AAL---------ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
AL +L + +G+KP VV Y T+I CK A+ L+ +M G P
Sbjct: 69 KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP 128
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDAL 273
+ TY+ LI G + L+ EM D TY ++ D L
Sbjct: 129 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 73 ISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKG 132
+ L R+M G+ N VT LI G A + ++ G PD +T+N L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 133 LCLHGKLHRAL---QFHD------DVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRR 183
LC +GKL +AL + D + +G + + VTY T+I+G CK G E A L R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 184 IEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYS 232
++ G P YNT+I + + + + +L EM + + + TY
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 9/175 (5%)
Query: 38 VSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINC 97
+ F M Q + + + ++ L + A + ++M G+ P+ +T NIL++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 98 HC---------YLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDD 148
C G+ + + ++ +G P+ +T+ T+I G C G A
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 149 VLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSL 203
+ G D TY TLI + G A+ EL++ + Y + D L
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 197/430 (45%), Gaps = 70/430 (16%)
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGF-QLDQVTYATLI-----NG 167
+ +R P T +N LIKG + ++ G + D+ T+ ++ NG
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
++G + L L RI G VV+ + +D K K + A ++ EM + N
Sbjct: 125 QVRVGSSVHGLVL--RI---GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----N 175
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
V+++AL+ + G+L++A + D M +N+ ++N LVD L K G + AK +
Sbjct: 176 AVSWTALVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFD 231
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M K+ D+++Y+S++DGY ++ ARD+F RGV +V++++ +I G +
Sbjct: 232 EMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEA--RGV--DVRAWSALILGYAQNG 283
Query: 348 MVDEALNLLEEMDYEKIIPNKV------------------------------TYSS---- 373
+EA + EM + + P++ +SS
Sbjct: 284 QPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV 343
Query: 374 --LIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIID 431
LID K G + A +L +EM R D+++Y S ++ + + I L +K++D
Sbjct: 344 PALIDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 432 KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNL--NNWTYNTMINGLCKEGLF 489
+GI PD + ++L +C R+ + + +L +K Y++ + Y+ ++N L + G
Sbjct: 400 EGIVPDEVAFTVILK-VCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKL 458
Query: 490 DEALTLMSKM 499
EA L+ M
Sbjct: 459 KEAYELIKSM 468
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 151/321 (47%), Gaps = 24/321 (7%)
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNI-DPDVVTYNILVDALGKEGKVREAK 283
SP ++ LI G+ + + +L M+ + PD T+ +++ G+VR
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 284 NMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGL 343
++ ++++ G DVV +S +D Y ++ AR VF M R N S+ ++
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAY 186
Query: 344 CKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADI 403
K ++EA ++ + M N ++++L+DGL K+G + NA +L DEM R DI
Sbjct: 187 VKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DI 238
Query: 404 ITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQD 463
I+Y S +D KG + L ++ +G+ D+ ++ L+ G + G+ +A +VF +
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEA--RGV--DVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 464 LFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEK-- 521
+ K + + +++ + G F+ + S + + + ++ AL +
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR---MNKFSSHYVVPALIDMNA 351
Query: 522 --GENDKAEKLLREMIARDLL 540
G D+A KL EM RDL+
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLV 372
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 193/452 (42%), Gaps = 70/452 (15%)
Query: 114 ILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ-VTYATLINGLCKMG 172
+++R HP ++ TL K LC ++H Q H ++ +G + DQ + + +
Sbjct: 1 MIQRLSHPSLLSLETLFK-LC-KSEIHLN-QIHARIIRKGLEQDQNLISIFISSSSSSSS 57
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS-PNVVTY 231
+ + R+ P ++N +I L + M+ G++ P+ T+
Sbjct: 58 SLSYSSSVFERVP----SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTF 113
Query: 232 SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIK 291
++ GQ++ + ++ D DVV VD GK + A+ + M +
Sbjct: 114 PLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPE 173
Query: 292 QGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDE 351
+ + V++++L+ Y E+ +A+ +F+ M R N+ S+N ++ GL K +
Sbjct: 174 R----NAVSWTALVVAYVKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVN 225
Query: 352 ALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
A L +EM II +Y+S+IDG K G + +A +L +E RG D+ +++ +
Sbjct: 226 AKKLFDEMPKRDII----SYTSMIDGYAKGGDMVSARDLFEE--ARG--VDVRAWSALIL 277
Query: 412 ALCKGHHVDKGIALIKKIIDKGIQPD-------------MCTYNI--------------- 443
+ ++ + ++ K ++PD M + +
Sbjct: 278 GYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF 337
Query: 444 --------LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTL 495
L+D KCG + A ++F+++ ++ + +Y +M+ G+ G EA+ L
Sbjct: 338 SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRL 393
Query: 496 MSKMEDNGCIHDPITFETII-----SALFEKG 522
KM D G + D + F I+ S L E+G
Sbjct: 394 FEKMVDEGIVPDEVAFTVILKVCGQSRLVEEG 425
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 120/273 (43%), Gaps = 18/273 (6%)
Query: 56 FNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANIL 115
+N ++ LVK+ A L +M I ++ +I+ + G SA ++
Sbjct: 210 WNALVDGLVKSGDLVNAKKLFDEMPKRDI----ISYTSMIDGYAKGGDMVSA----RDLF 261
Query: 116 KRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTE 175
+ D ++ LI G +G+ + A + ++ A+ + D+ L++ +MG E
Sbjct: 262 EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Query: 176 AALELLRRIEGRGIK-PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSAL 234
++ + R K + + +ID K + A L+ EM + ++V+Y ++
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSM 377
Query: 235 IYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQG- 293
+ G I G +AI L ++MV + I PD V + +++ G+ V E +M K+
Sbjct: 378 MEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYS 437
Query: 294 --VKPDVVTYSSLMDGYCLVNEVNKARDVFNAM 324
PD YS +++ ++ +A ++ +M
Sbjct: 438 ILASPD--HYSCIVNLLSRTGKLKEAYELIKSM 468
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 191/426 (44%), Gaps = 31/426 (7%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+V + + +++ P + N VL ++ +SL +ME G++P+ T
Sbjct: 57 SVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFT 116
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
++ L ++ F+ +++ G+ + N LI G L A + DD
Sbjct: 117 FVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDD---- 172
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ +V ++++ +G K G+ + A+ L + + V +N +I K K + A
Sbjct: 173 SAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSA 228
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+L+ K +VVT++A+I G+ G K+A+G+ EM PDVVT L+ A
Sbjct: 229 RELFDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVV-----TYSSLMDGYCLVNEVNKARDVFNAMARR 327
G + K + +++ + +++L+D Y +++A +VF + R
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA 387
++ ++N +I GL + + ++ + EEM K+ PN+VT+ +I +G+V
Sbjct: 345 ----DLSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 388 ---WELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
+ L+ +M+ +I Y +D L + +++ ++ + I+P+ + L
Sbjct: 400 RKYFSLMRDMY--NIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTL 454
Query: 445 LDGLCK 450
L G CK
Sbjct: 455 L-GACK 459
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 161/366 (43%), Gaps = 51/366 (13%)
Query: 190 KPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY----------GFC 239
KP V + N ++ + LY+EM +G+SP+ T++ ++ GF
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 240 IVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVV 299
G++ + +L+E V KN ++ ++ LG + + + K V
Sbjct: 134 FHGKVVRHGFVLNEYV-KNA---LILFHANCGDLG----------IASELFDDSAKAHKV 179
Query: 300 TYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM 359
+SS+ GY ++++A +F+ M + + ++N+MI G K K +D A L +
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 360 DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHV 419
+ + VT++++I G G A + EM G+ D++T S L A +
Sbjct: 236 TEKDV----VTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 420 DKGIALIKKIID-----KGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNW 474
+ G L I++ I +N L+D KCG I A EVF+ + K +L+ W
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV--KDRDLSTW 349
Query: 475 TYNTMINGLC---KEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEK-- 529
NT+I GL EG ++ + +M+ + +TF +I A G D+ K
Sbjct: 350 --NTLIVGLALHHAEG----SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 530 -LLREM 534
L+R+M
Sbjct: 404 SLMRDM 409
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 10/223 (4%)
Query: 318 RDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDG 377
+ + +M G+ N+ +IY V AL ++ E P+ + ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASL--SVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 378 LCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPD 437
++ K L EM RG D T+ L A K G A K++ G +
Sbjct: 87 SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLN 146
Query: 438 MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
N L+ CG + A E+F D K + +++M +G K G DEA+ L
Sbjct: 147 EYVKNALILFHANCGDLGIASELFDDSAKA----HKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 498 KMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
+M D + + +I+ + E D A +L +D++
Sbjct: 203 EMP----YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 197/467 (42%), Gaps = 27/467 (5%)
Query: 75 LSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPD----TITFNTLI 130
L R+M+ G PN T + L V A+++K + D T T + +
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 131 KGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIK 190
K C ++ + V + + D T+ +++G C+ G T+ A L R + I
Sbjct: 99 K--C------NSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 191 PTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGL 250
P V T+I S K + +++ I G+ V + I + G L A L
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA-KL 209
Query: 251 LDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
+ E + + D VV++N + A G+ +A + +M+++ KPD+ T+ +L
Sbjct: 210 VFEAIDRG-DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVT 370
+ + R + + G ++++ N I K + A L + M V+
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC----VS 324
Query: 371 YSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKII 430
++ +I G + G + A L M G+ D++T S + K ++ G + +
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 431 DKGIQPD---MCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
G + D +C N L+D KCG I +A+++F + +K + WT TMI G G
Sbjct: 385 IYGCKRDNVMIC--NALIDMYSKCGSIHEARDIFDNTPEK--TVVTWT--TMIAGYALNG 438
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREM 534
+F EAL L SKM D + ITF ++ A G +K + M
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 218/519 (42%), Gaps = 83/519 (15%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
+VD F RM + T +N +L+ ++ H A SL R+M + ITP+ VT+
Sbjct: 102 SVDYAAKVFERMPERDATT----WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVM 157
Query: 93 ILINCHCY----------------LG---QTTSAFSVLANILK---------------RG 118
LI + LG Q T A + ++ K RG
Sbjct: 158 TLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG 217
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQT---- 174
+++N++ K + G+ A + +L + F+ D T+ L C+ +T
Sbjct: 218 -DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS-CQNPETLTQG 275
Query: 175 ----EAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVT 230
A+ L + I + MY+ D+ C +L+ FD+ + S V+
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDT-CSARLL---FDIMT-------SRTCVS 324
Query: 231 YSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMI 290
++ +I G+ G + +A+ L M+ PD+VT L+ GK G + K + A
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 291 KQGVKPD-VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMV 349
G K D V+ ++L+D Y +++ARD+F+ + V ++ MI G +
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV----TWTTMIAGYALNGIF 440
Query: 350 DEALNLLEEM---DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT- 405
EAL L +M DY+ PN +T+ +++ +G + WE H+ Q +I
Sbjct: 441 LEALKLFSKMIDLDYK---PNHITFLAVLQACAHSGSLEKGWEYF---HIMKQVYNISPG 494
Query: 406 ---YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGR-IKDAQEVF 461
Y+ +D L + +++ + LI+ + K PD + LL+ CK R +K A++
Sbjct: 495 LDHYSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWGALLNA-CKIHRNVKIAEQAA 550
Query: 462 QDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
+ LF + Y M N G++D + S M+
Sbjct: 551 ESLFNLEPQMAA-PYVEMANIYAAAGMWDGFARIRSIMK 588
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 126/328 (38%), Gaps = 51/328 (15%)
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
+++ L EM +P+ T+ + A + V + + A +IK DV ++ +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 306 DGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKII 365
D + N V+ A VF M R T ++N M+ G C+ D+A +L EM +I
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDAT----TWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 366 PNKVTYSSLIDGLCKTGKVSNAWELLDEMH---VR-GQPADIITYNSFLDALCKGHHVDK 421
P+ VT +LI ++ + +LL+ MH +R G + N+++ K +D
Sbjct: 151 PDSVTVMTLI----QSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 422 GIALIKKIIDKG----------------------------------IQPDMCTYNILLDG 447
L+ + ID+G +PD+ T+ L
Sbjct: 207 A-KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 448 LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHD 507
+ + + G + + NT I+ K A L M C+
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCV-- 323
Query: 508 PITFETIISALFEKGENDKAEKLLREMI 535
++ +IS EKG+ D+A L MI
Sbjct: 324 --SWTVMISGYAEKGDMDEALALFHAMI 349
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 206/475 (43%), Gaps = 48/475 (10%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
+ V + L++ G+ A + ++ G PD +T ++++G G L A H
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
+ + F LD+ TL N L M L RI + K V + +I S +
Sbjct: 226 GQITRKMFDLDE----TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 207 KLVSHAFDLYSEMIAKGISPNVVT-YSAL--------------IYGFCIVGQLKQ----- 246
+ A +SEMI GI PN+VT YS L ++GF + +L
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 247 AIGLLD-----------EMVLKNI-DPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGV 294
++ L++ E VL+ + D ++V +N L+ G V +A + M+ Q +
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 295 KPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN-VQSYNIMIYGLCKIKMVDEAL 353
KPD T +S + V + + + R V+ VQ+ I +Y K VD A
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYS--KSGSVDSAS 459
Query: 354 NLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
+ ++ + + VT++S++ G + G A L D M+ + +T+ + + A
Sbjct: 460 TVFNQIKHRSV----VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNN 473
++KG + K+I G++ D+ T L+D KCG + A+ VF+ + +
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV--- 571
Query: 474 WTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAE 528
++++MIN G A++ ++M ++G + + F ++SA G ++ +
Sbjct: 572 -SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 109/513 (21%), Positives = 221/513 (43%), Gaps = 64/513 (12%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPNFVTLN 92
+D + ++R++ F VL + ++ H S + ++ G+ + V
Sbjct: 81 LDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIET 140
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
L+ + G + A V + R D + ++TL+ +G++ +AL+ ++
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPVR----DLVAWSTLVSSCLENGEVVKALRMFKCMVDD 196
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D VT +++ G ++G L + R + G+ + + T+ +SL + + S
Sbjct: 197 GVEPDAVTMISVVEGCAELG----CLRIARSVHGQITRKMFDLDETLCNSL--LTMYSKC 250
Query: 213 FDLYS-----EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYN 267
DL S E IAK N V+++A+I + ++A+ EM+ I+P++VT
Sbjct: 251 GDLLSSERIFEKIAK---KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS-SLMDGYCLVNEVNKARDVFNAMAR 326
++ + G G +RE K++ +++ + P+ + S +L++ Y +++ V ++
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD 367
Query: 327 RGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSN 386
R N+ ++N +I MV +AL L +M ++I P+ T +S I G V
Sbjct: 368 R----NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP- 422
Query: 387 AWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
L ++H GH + ++ D+ +Q N L+D
Sbjct: 423 ---LGKQIH--------------------GHVIRTDVS------DEFVQ------NSLID 447
Query: 447 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIH 506
K G + A VF + + T+N+M+ G + G EA++L M +
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVV----TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 507 DPITFETIISALFEKGENDKAEKLLREMIARDL 539
+ +TF +I A G +K + + ++I L
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL 536
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 87 NFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFH 146
N V N LI+ + + G A + ++ + PD T + I G + Q H
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 147 DDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKV 206
V+ D+ +LI+ K G ++A + +I+ R +VV +N+++ +
Sbjct: 429 GHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHR----SVVTWNSMLCGFSQN 483
Query: 207 KLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTY 266
A L+ M + N VT+ A+I +G L++ + ++++ + D+ T
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTD 542
Query: 267 NILVD-------------------------------ALGKEGKVREAKNMLAVMIKQGVK 295
L+D A G G++ A + M++ G K
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTK 602
Query: 296 PDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
P+ V + +++ V + + FN M GV+PN + + I L + + EA
Sbjct: 603 PNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRT 662
Query: 356 LEEMDYEKIIPNKVTYSSLIDG 377
++EM + + + + SL++G
Sbjct: 663 IKEMPF---LADASVWGSLVNG 681
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 224 ISPNVVTYSALIYGFCIVGQLKQAIGLLDEMV-LKNIDPDVVTYNILVDALGKEGKVREA 282
I V + +AL++ + K+A + EM + I+PD+ TYN ++ L + G +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+++A M ++ +KP ++ ++DG+ + ++ R V M GV V +YNIMI
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPAD 402
LCK K EA L++ + ++ PN VTYS LI G C + A L + M G D
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQE--- 459
Y + + LCKG + + L ++ ++K P L++GL ++ +A+E
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381
Query: 460 VFQDLFKKGYNLNN 473
V ++ F + +L N
Sbjct: 382 VVKEKFTRNVDLWN 395
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 250 LLDEMVLKNIDPDVVTYNILVDAL-GKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGY 308
LLD + DP ++ + L G+ + + + + + V + ++L+
Sbjct: 97 LLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFAC 156
Query: 309 CLVNEVNKARDVFNAMARR-GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPN 367
+ + +A V+ M + G+ P++++YN MI LC+ + +++ EM+ + I P
Sbjct: 157 LMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPT 216
Query: 368 KVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIK 427
++ +IDG K K +++ M G + TYN + LCK + ALI
Sbjct: 217 AASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALID 276
Query: 428 KIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEG 487
++ ++P+ TY++L+ G C + +A +F+ + GY ++ Y T+I+ LCK G
Sbjct: 277 GVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGG 336
Query: 488 LFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLL 531
F+ AL L + + + + +++ L + + D+A++L+
Sbjct: 337 DFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 5/291 (1%)
Query: 209 VSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
VS D + + S + + ++YG L ++I + I V + N
Sbjct: 94 VSQLLDGFIQNQPDPKSESFAVRAIILYG--RANMLDRSIQTFRNLEQYEIPRTVKSLNA 151
Query: 269 LVDALGKEGKVREAKNMLAVMIKQ-GVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
L+ A +EA + M K G++PD+ TY+ ++ C + + + M R+
Sbjct: 152 LLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERK 211
Query: 328 GVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNA 387
+ P S+ +MI G K + DE ++ MD + TY+ +I LCK K + A
Sbjct: 212 WIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEA 271
Query: 388 WELLDE-MHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLD 446
L+D M R +P + +TY+ + C ++D+ + L + ++ G +PD Y L+
Sbjct: 272 KALIDGVMSCRMRP-NSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIH 330
Query: 447 GLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMS 497
LCK G + A + ++ +K + + ++NGL DEA L++
Sbjct: 331 CLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 118 GYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAA 177
G PD T+N +I+ LC G + ++ + + ++ +I+G K + +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
+++R ++ G+ V YN +I LCK K + A L +++ + PN VTYS LI+G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 238 FCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPD 297
FC L +A+ L + MV PD Y L+ L K G A + +++ P
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 298 VVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
L++G ++V++A+++ A+ + T NV +N
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELI-AVVKEKFTRNVDLWN 395
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
G + D TY +I LC+ G T ++ ++ +E + IKPT + +ID K +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
+ M G+ V TY+ +I C + +A L+D ++ + P+ VTY++L+
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
E + EA N+ VM+ G KPD Y +L+ C + A + + P+
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 333 VQSYNIMIYGLCKIKMVDEALNLL 356
++ GL VDEA L+
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELI 380
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 130/281 (46%), Gaps = 2/281 (0%)
Query: 262 DVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS-SLMDGYCLVNEVNKARDV 320
D + +++ V L +E +L I+ P +++ + Y N ++++
Sbjct: 74 DRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQT 133
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEM-DYEKIIPNKVTYSSLIDGLC 379
F + + + V+S N +++ K EA + EM I P+ TY+ +I LC
Sbjct: 134 FRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLC 193
Query: 380 KTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMC 439
++G S+++ ++ EM + ++ +D K D+ +++ + + G+ +
Sbjct: 194 ESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVA 253
Query: 440 TYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKM 499
TYNI++ LCK + +A+ + + N+ TY+ +I+G C E DEA+ L M
Sbjct: 254 TYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM 313
Query: 500 EDNGCIHDPITFETIISALFEKGENDKAEKLLREMIARDLL 540
NG D + T+I L + G+ + A L RE + ++ +
Sbjct: 314 VCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWV 354
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%)
Query: 49 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAF 108
I P F ++ K + + + R M+ G+ T NI+I C C ++ A
Sbjct: 213 IKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAK 272
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
+++ ++ P+++T++ LI G C L A+ + ++ G++ D Y TLI+ L
Sbjct: 273 ALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCL 332
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDL 215
CK G E AL L R + P+ + +++ L V A +L
Sbjct: 333 CKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
Query: 49 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAF 108
I P + +N+++ L ++ S++ S+ +ME I P + ++I+ +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
V+ + + G H T+N +I+ LC K A D V++ + + VTY+ LI+G
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNV 228
C + A+ L + G KP Y T+I LCK A L E + K P+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 229 VTYSALIYGFCI---VGQLKQAIGLLDEMVLKNID 260
L+ G V + K+ I ++ E +N+D
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVD 392
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 208/482 (43%), Gaps = 23/482 (4%)
Query: 60 LTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGY 119
L SL K + + A ++M+ G++ + + L C ++ S +L + ++ G
Sbjct: 55 LVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEA-CRELRSLSHGRLLHDRMRMGI 113
Query: 120 -HPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
+P + N +++ C R+L+ D + + +L+ V+ T+I+ + G + A+
Sbjct: 114 ENPSVLLQNCVLQMYCEC----RSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 179 ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGF 238
L + G KP MY T++ SL + + +++ +I G+ N + ++ +
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 239 CIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDV 298
G L A + D+M +K V L+ + G+ R+A + ++ +GV+ D
Sbjct: 230 VKCGWLVGAKRVFDQMAVKK----PVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDS 285
Query: 299 VTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEE 358
+S ++ + E+N + + +A+ G+ V ++ K + A +E
Sbjct: 286 FVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQE 345
Query: 359 MDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADII---TYNSFLDALCK 415
+ PN V++S++I G C+ + A + + R + A I+ TY S A
Sbjct: 346 IRE----PNDVSWSAIISGYCQMSQFEEAVKTFKSL--RSKNASILNSFTYTSIFQACSV 399
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+ G + I + + + L+ KCG + DA EVF+ + ++ WT
Sbjct: 400 LADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM--DNPDIVAWT 457
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
I+G G EAL L KM G + +TF +++A G ++ + L M+
Sbjct: 458 --AFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTML 515
Query: 536 AR 537
+
Sbjct: 516 RK 517
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 166/420 (39%), Gaps = 25/420 (5%)
Query: 34 VDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEI----TGITPNFV 89
+D V F+ ML PP + +L SLV + A+ RQ+ G+ N
Sbjct: 165 LDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPR----ALDFGRQIHAHVIRAGLCSNTS 220
Query: 90 TLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDV 149
++N + G A V + + + L+ G G+ AL+ D+
Sbjct: 221 IETGIVNMYVKCGWLVGAKRVFDQMAVK----KPVACTGLMVGYTQAGRARDALKLFVDL 276
Query: 150 LAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLV 209
+ +G + D ++ ++ + + ++ + G++ V + ++D K
Sbjct: 277 VTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSF 336
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDP-DVVTYNI 268
A + E+ PN V++SA+I G+C + Q ++A+ + KN + TY
Sbjct: 337 ESACRAFQEI----REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTS 392
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
+ A + A IK+ + S+L+ Y ++ A +VF +M
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD--- 449
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAW 388
P++ ++ I G EAL L E+M + PN VT+ +++ G V
Sbjct: 450 -NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 389 ELLDEMHVRGQPADIIT-YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG 447
LD M + A I Y+ +D + +D+ + +K + +PD ++ L G
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM---PFEPDAMSWKCFLSG 565
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 208/460 (45%), Gaps = 35/460 (7%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFS 109
TP ++ +NK+L SL K ++ ++L ++ G+ P+ TL +++ L +
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 110 VLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLC 169
V +K G D+ N+L+ GK+ + D++ Q D V++ LI+
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP----QRDVVSWNGLISSYV 123
Query: 170 KMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVV 229
G+ E A+ + +R+ N D V +S L + I + I VV
Sbjct: 124 GNGRFEDAIGVFKRMSQES--------NLKFDEGTIVSTLSACSALKNLEIGERIYRFVV 175
Query: 230 TY--------SALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVRE 281
T +AL+ FC G L +A + D M KN+ + +V G++ E
Sbjct: 176 TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDE 231
Query: 282 AKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIY 341
A+ V+ ++ DVV ++++M+GY N ++A ++F M G+ P+ ++
Sbjct: 232 AR----VLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLT 287
Query: 342 GLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPA 401
G + +++ + ++ ++ +KV ++L+D K G + A E+ E+ R
Sbjct: 288 GCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER---- 343
Query: 402 DIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVF 461
D ++ S + L + + L ++ + G++ D T+ +L G + + +++F
Sbjct: 344 DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIF 403
Query: 462 QDLFKKGYNLNNWTY--NTMINGLCKEGLFDEALTLMSKM 499
+ ++ +N+ + + +I+ LC+ GL DEA L+ KM
Sbjct: 404 HSMTER-HNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 185/421 (43%), Gaps = 24/421 (5%)
Query: 121 PDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALEL 180
P + +N ++K L + L ++ QG D T ++ + ++ + ++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 181 LRRIEGRGIKPTVVMYNTIID---SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
G++ + N+++ SL K+++ FD EM + +VV+++ LI
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFD---EMPQR----DVVSWNGLISS 121
Query: 238 FCIVGQLKQAIGLLDEMVLK-NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
+ G+ + AIG+ M + N+ D T + A + + + ++ + +
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEM 180
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
V ++L+D +C ++KAR VF++M + NV+ + M++G +DEA L
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDK----NVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
E + + V ++++++G + + A EL M G D S L +
Sbjct: 237 ER----SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQT 292
Query: 417 HHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTY 476
+++G + I + + D L+D KCG I+ A EVF ++ K + +WT
Sbjct: 293 GALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI--KERDTASWT- 349
Query: 477 NTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMIA 536
++I GL G+ AL L +ME+ G D ITF +++A G + K+ M
Sbjct: 350 -SLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE 408
Query: 537 R 537
R
Sbjct: 409 R 409
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 132/300 (44%), Gaps = 16/300 (5%)
Query: 225 SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKN 284
+P+++ Y+ ++ + + L E+ + + PD T +++ ++G+ KV E +
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 285 MLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC 344
+ +K G++ D +SLM Y + ++ VF+ M +R +V S+N +I
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----DVVSWNGLISSYV 123
Query: 345 KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGL--CKTGKVSNAWELLDEMHVRGQPAD 402
++A+ + + M E + K +++ L C K E + V
Sbjct: 124 GNGRFEDAIGVFKRMSQESNL--KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS 181
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
+ N+ +D CK +DK A+ + DK ++ + ++ G GRI +A+ +F+
Sbjct: 182 VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEARVLFE 237
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
K L WT M+NG + FDEAL L M+ G D ++++ + G
Sbjct: 238 RSPVKDVVL--WT--AMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTG 293
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 212/492 (43%), Gaps = 23/492 (4%)
Query: 50 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSA-F 108
T + N +L+ L K K + QM I G+ + + LI C L ++ +
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLI-AFCALSESRYLDY 105
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQG---FQLDQVTYATLI 165
SV ILK +P+ ++N I+G + + +L G + D TY L
Sbjct: 106 SV--KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLF 163
Query: 166 NGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGIS 225
+ + +L + ++ ++N I + +A ++ E +
Sbjct: 164 KVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR--- 220
Query: 226 PNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
++V+++ LI G+ +G+ ++AI + M + + PD VT LV + G + K
Sbjct: 221 -DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
+ + G++ + ++LMD + ++++AR +F+ + +R + S+ MI G +
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SWTTMISGYAR 335
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
++D + L ++M+ + + V ++++I G + + +A L EM D IT
Sbjct: 336 CGLLDVSRKLFDDMEEKDV----VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLF 465
L A + +D GI + + I + ++ L+D KCG I +A VF +
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 466 KKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGEND 525
+ N+ TY +I GL G A++ ++M D G D ITF ++SA G
Sbjct: 452 TR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQ 507
Query: 526 KAEKLLREMIAR 537
+M +R
Sbjct: 508 TGRDYFSQMKSR 519
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 207/495 (41%), Gaps = 26/495 (5%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGI---TPNFVTLNILINCHCYLGQTTSA 107
P I +N + ++++ + L +QM G P+ T +L L ++
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 108 FSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLING 167
+L ++LK + N I G + A + D+ + D V++ LING
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR----DLVSWNCLING 231
Query: 168 LCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
K+G+ E A+ + + +E G+KP V ++ S + ++ + Y + G+
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 228 VVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLA 287
+ +AL+ F G + +A + D + + I V++ ++ + G + ++ +
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFD 347
Query: 288 VMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIK 347
M ++ DVV +++++ G A +F M P+ + + ++
Sbjct: 348 DMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 348 MVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYN 407
+D + + ++ + N +SL+D K G +S A + + R +TY
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNS----LTYT 459
Query: 408 SFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKK 467
+ + L I+ ++ID GI PD T+ LL C G I+ ++ F + K
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM-KS 518
Query: 468 GYNLNNW--TYNTMINGLCKEGLFDEALTLMSK--MEDNGCIHDPITFETIISALFEKGE 523
+NLN Y+ M++ L + GL +EA LM ME + + + F + E GE
Sbjct: 519 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 578
Query: 524 NDKAEKLLREMIARD 538
KA K L E+ D
Sbjct: 579 --KAAKKLLELDPSD 591
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 151/348 (43%), Gaps = 8/348 (2%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
Y LI L K Q E A EL + + G +Y ++ + + AF L M
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 221 AK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKV 279
+ P+V TYS LI F V + LL +M + I P+ +TYN L+DA GK
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 280 REAKNMLAVMIKQG-VKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNI 338
E ++ L M+ + KPD T +S + + ++ + + G+ PN++++NI
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 332
Query: 339 MI--YGLC-KIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMH 395
++ YG K + + +++ Y I VTY+ +ID + G + L M
Sbjct: 333 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTI---VTYNVVIDAFGRAGDLKQMEYLFRLMQ 389
Query: 396 VRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIK 455
+T S + A + DK +++ I + I+ D+ +N L+D + +
Sbjct: 390 SERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFA 449
Query: 456 DAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNG 503
+ + V + + KKG+ + TY TM+ G+ L +E G
Sbjct: 450 EMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVG 497
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 153/347 (44%), Gaps = 8/347 (2%)
Query: 119 YHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAAL 178
Y P+ + LI L + +A + +++ +G ++ Y L++ + G+ +AA
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 179 ELLRRIEG-RGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
LL R++ +P V Y+ +I S +V DL S+M +GI PN +TY+ LI
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 238 FCIVGQLKQAIGLLDEMVLKN-IDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
+ + L +M+ ++ PD T N + A G G++ +N G++P
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
++ T++ L+D Y K V M + + + +YN++I + + + L
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 357 EEMDYEKIIPNKVTYSSLIDGL---CKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
M E+I P+ VT SL+ K K+ ++ +R D++ +N +DA
Sbjct: 386 RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR---LDLVFFNCLVDAY 442
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEV 460
+ + +++ + KG +PD TY ++ G +E+
Sbjct: 443 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 150/342 (43%), Gaps = 4/342 (1%)
Query: 178 LELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYG 237
ELLR E KP V +Y +I L K K A +L+ EMI +G N Y+AL+
Sbjct: 137 FELLR--EQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 238 FCIVGQLKQAIGLLDEM-VLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
+ G+ A LL+ M N PDV TY+IL+ + + + +++L+ M +QG++P
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 297 DVVTYSSLMDGYCLVNE-VNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNL 355
+ +TY++L+D Y V + + P+ + N + ++ N
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENC 314
Query: 356 LEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCK 415
E+ I PN T++ L+D K+G +++ M I+TYN +DA +
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Query: 416 GHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWT 475
+ + L + + + I P T L+ + + V + + L+
Sbjct: 375 AGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVF 434
Query: 476 YNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISA 517
+N +++ + F E ++ ME G D IT+ T++ A
Sbjct: 435 FNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 158/348 (45%), Gaps = 4/348 (1%)
Query: 46 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTT 105
Q+ P + + K++ L K K A L ++M G N L++ + G+
Sbjct: 143 QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFD 202
Query: 106 SAFSVLANILKRGY--HPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYAT 163
+AF++L +K + PD T++ LIK + D+ QG + + +TY T
Sbjct: 203 AAFTLLER-MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNT 261
Query: 164 LINGLCKMGQ-TEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAK 222
LI+ K E L++ + KP N+ + + + + Y + +
Sbjct: 262 LIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSS 321
Query: 223 GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREA 282
GI PN+ T++ L+ + G K+ +++ M + +VTYN+++DA G+ G +++
Sbjct: 322 GIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQM 381
Query: 283 KNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYG 342
+ + +M + + P VT SL+ Y ++ +K V + + ++ +N ++
Sbjct: 382 EYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDA 441
Query: 343 LCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWEL 390
+++ E +LE M+ + P+K+TY +++ +G ++ EL
Sbjct: 442 YGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 4/289 (1%)
Query: 246 QAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLM 305
Q LL E + P+V Y L+ LGK + +A + MI +G + Y++L+
Sbjct: 135 QVFELLREQLW--YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 306 DGYCLVNEVNKARDVFNAM-ARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKI 364
Y + A + M + P+V +Y+I+I ++ D+ +LL +M + I
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 365 IPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ-PADIITYNSFLDALCKGHHVDKGI 423
PN +TY++LID K L +M D T NS L A ++
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 424 ALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGL 483
+K GI+P++ T+NILLD K G K V + + K Y+ TYN +I+
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 484 CKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLR 532
+ G + L M+ +T +++ A + DK +LR
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 6/244 (2%)
Query: 295 KPDVVTYSSL--MDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEA 352
KP+V Y L M G C + KA ++F M G N + Y ++ + D A
Sbjct: 147 KPNVGIYVKLIVMLGKC--KQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAA 204
Query: 353 LNLLEEM-DYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLD 411
LLE M P+ TYS LI + +LL +M +G + ITYN+ +D
Sbjct: 205 FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID 264
Query: 412 ALCKGH-HVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQDLFKKGYN 470
A K V+ LI+ + + +PD T N L G+I+ + ++ G
Sbjct: 265 AYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 324
Query: 471 LNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKL 530
N T+N +++ K G + + +M M+ +T+ +I A G+ + E L
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYL 384
Query: 531 LREM 534
R M
Sbjct: 385 FRLM 388
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 160/318 (50%), Gaps = 5/318 (1%)
Query: 126 FNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIE 185
FN++I +GK ++ + + ++D+ T + L + Q E A + +
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 186 GRGIK-PTVVMYNTIIDSLCKVKLVSHAFDLYSEM-IAKGISPNVVTYSALIYGFCIVGQ 243
GI TV ++ LC ++ A +L EM + KG+ N+VT+ ++I G C+
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRW 260
Query: 244 LKQAIGLLDEMVLK-NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYS 302
+ + L+ +++ K ++ D+ +Y +L+D GKV EA+ ++ +M + ++ + Y+
Sbjct: 261 DFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320
Query: 303 SLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYE 362
+M+GY V K ++++ M+ RGVTPN +Y +++ GLCK V EA++ L E+
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVN 380
Query: 363 KIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKG 422
+ ++ YS+L + + G + + E++ EM G D+L + + +
Sbjct: 381 EFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKEAQ 440
Query: 423 IALIKKIIDKGIQPDMCT 440
+ LI ++ GI+P C+
Sbjct: 441 M-LITIVVKCGIKPKSCS 457
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 179/376 (47%), Gaps = 29/376 (7%)
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGI--KPTVVMYNTIIDSL-CKVKLV 209
FQ D T+ +L + + A ELL+ + I P V+ +++ID C+ K+V
Sbjct: 79 SFQPDLRTHLSLTFRVLSERRFSYAKELLKPVAIDDILRYPFNVIVSSVIDECGCEKKVV 138
Query: 210 SHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNIL 269
F+ ++I + G+ + + + + M + D T +
Sbjct: 139 GRFFN------------------SMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLH 180
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSL---MDGYCLVNEVNKARDVFNAMAR 326
+ L + ++ A++ ++M++ G+ DVVT SL + C E+ +AR++ M
Sbjct: 181 LLNLKRCDQMELARDFFSLMVESGI--DVVTVYSLTVVVTVLCCNGEITRARELVEEMGL 238
Query: 327 -RGVTPNVQSYNIMIYGLCKIKMVDEALNL-LEEMDYEKIIPNKVTYSSLIDGLCKTGKV 384
+GV N+ ++ MI G C + E L+L L+ M+ E ++ + +Y LIDG GKV
Sbjct: 239 VKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKV 297
Query: 385 SNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNIL 444
A L+ MH + + YN ++ + V+K I L ++ +G+ P+ TY +L
Sbjct: 298 EEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVL 357
Query: 445 LDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGC 504
++GLCK G++ +A +L + ++ Y+T+ + G+ D++L ++++M +G
Sbjct: 358 MNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGF 417
Query: 505 IHDPITFETIISALFE 520
I E + +LFE
Sbjct: 418 IPGATICERLADSLFE 433
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 212 AFDLYSEMIAKGISP-NVVTYSALIYGFCIVGQLKQAIGLLDEM-VLKNIDPDVVTYNIL 269
A D +S M+ GI V + + ++ C G++ +A L++EM ++K + ++VT+ +
Sbjct: 193 ARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSM 252
Query: 270 VDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGV 329
+ K E +L +M K+ V D+ +Y L+DG+ +V +A + M + +
Sbjct: 253 IGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKL 312
Query: 330 TPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWE 389
YN+++ G + +V++ + L EM + PNK TY L++GLCK GKV A
Sbjct: 313 RVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMS 372
Query: 390 LLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLC 449
L+E+ V D Y++ + + +DK + ++ ++I G P L D L
Sbjct: 373 FLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLF 432
Query: 450 KCGRIKDAQEVFQDLFKKG 468
+ R K+AQ + + K G
Sbjct: 433 EVNR-KEAQMLITIVVKCG 450
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 8/256 (3%)
Query: 90 TLNILINCHCYLGQTTSAFSVLANI-LKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDD 148
+L +++ C G+ T A ++ + L +G + +TF ++I G C+ L
Sbjct: 212 SLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLK 270
Query: 149 VLA-QGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVK 207
++ + LD +Y LI+G G+ E A L+ + + ++ +YN I++ +
Sbjct: 271 LMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFG 330
Query: 208 LVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYN 267
LV +LYSEM ++G++PN TY L+ G C G++ +A+ L+E+ + + D Y+
Sbjct: 331 LVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYS 390
Query: 268 ILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARR 327
L + + G + ++ ++A MI+ G P L D VN +A+ + + +
Sbjct: 391 TLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQMLITIVVKC 449
Query: 328 GVTPNVQSYNIMIYGL 343
G+ P S YGL
Sbjct: 450 GIKPKSCSQ----YGL 461
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 81/174 (46%)
Query: 53 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLA 112
I+ F ++ VK + + + ME + + + +LI+ G+ A ++
Sbjct: 246 IVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVL 305
Query: 113 NILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMG 172
+ + ++ +N ++ G G + + ++ + ++ ++G ++ TY L+NGLCK G
Sbjct: 306 MMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAG 365
Query: 173 QTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISP 226
+ A+ L + + MY+T+ + +V ++ + ++ +EMI G P
Sbjct: 366 KVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 157/358 (43%), Gaps = 53/358 (14%)
Query: 213 FDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDA 272
DL + + PNV Y+AL GF +++ L M+ ++ P TY+ LV A
Sbjct: 821 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 880
Query: 273 LGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPN 332
+ E+ + A + K G V ++L+D Y + +AR VF+ M R +
Sbjct: 881 SSFASRFGES--LQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----D 934
Query: 333 VQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLD 392
++ M+ ++ +D A +L +M EK N+ T + LI+G G + A L +
Sbjct: 935 DIAWTTMVSAYRRVLDMDSANSLANQMS-EK---NEATSNCLINGYMGLGNLEQAESLFN 990
Query: 393 EMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNI--------- 443
+M V+ DII++ + + + + IA+ K++++GI PD T +
Sbjct: 991 QMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLG 1046
Query: 444 --------------------------LLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYN 477
L+D KCG ++ A VF +L KK N + +N
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWN 1102
Query: 478 TMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKGENDKAEKLLREMI 535
++I GL G EAL + +KME + +TF ++ +A G D+ ++ R MI
Sbjct: 1103 SIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 1160
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 177/409 (43%), Gaps = 23/409 (5%)
Query: 57 NKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILK 116
N+ +T+ K A+S QM+ PN N L + + +L+
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQ----EPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 117 RGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEA 176
P + T+++L+K + +LQ H GF + T TLI+ G+
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT--TLIDFYSATGRIRE 922
Query: 177 ALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIY 236
A ++ + R + + T++ + +V + A L ++M K N T + LI
Sbjct: 923 ARKVFDEMPERDD----IAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLIN 974
Query: 237 GFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKP 296
G+ +G L+QA L ++M +K D++++ ++ + + REA + M+++G+ P
Sbjct: 975 GYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP 1030
Query: 297 DVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLL 356
D VT S+++ + + ++V + G +V + ++ K ++ AL +
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF 1090
Query: 357 EEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKG 416
+ + N ++S+I+GL G A ++ +M + + +T+ S A
Sbjct: 1091 FNLPKK----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHA 1146
Query: 417 HHVDKGIALIKKIIDK-GIQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
VD+G + + +ID I ++ Y ++ K G I +A E+ ++
Sbjct: 1147 GLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 176/420 (41%), Gaps = 34/420 (8%)
Query: 109 SVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGL 168
S LA ++K + D N I +L A+ + Q + + Y L G
Sbjct: 791 SALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAV----STMTQMQEPNVFVYNALFKGF 846
Query: 169 CKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAF--DLYSEMIAKGISP 226
+LEL R+ + P+ Y+ SL K + F L + + G
Sbjct: 847 VTCSHPIRSLELYVRMLRDSVSPSSYTYS----SLVKASSFASRFGESLQAHIWKFGFGF 902
Query: 227 NVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNML 286
+V + LI + G++++A + DEM + D + + +V A + + A ++
Sbjct: 903 HVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLA 958
Query: 287 AVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCKI 346
M ++ + T + L++GY + + +A +FN M + ++ S+ MI G +
Sbjct: 959 NQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQN 1010
Query: 347 KMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHV----RGQPAD 402
K EA+ + +M E IIP++VT S++I G + E+ E+H+ G D
Sbjct: 1011 KRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL----EIGKEVHMYTLQNGFVLD 1066
Query: 403 IITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDGLCKCGRIKDAQEVFQ 462
+ ++ +D K +++ + + + K + C +N +++GL G ++A ++F
Sbjct: 1067 VYIGSALVDMYSKCGSLERALLVFFNLPKKNL---FC-WNSIIEGLAAHGFAQEALKMFA 1122
Query: 463 DLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKMEDNGCIHDPITFETIISALFEKG 522
+ + N T+ ++ GL DE + M D+ I + + LF K
Sbjct: 1123 KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKA 1182
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 12/241 (4%)
Query: 33 NVDDTVSFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLN 92
N++ S FN+M II + ++ + K Y AI++ +M GI P+ VT++
Sbjct: 981 NLEQAESLFNQM----PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMS 1036
Query: 93 ILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQ 152
+I+ +LG V L+ G+ D + L+ G L RAL ++ +
Sbjct: 1037 TVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1096
Query: 153 GFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHA 212
+ ++I GL G + AL++ ++E +KP V + ++ + LV
Sbjct: 1097 NL----FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Query: 213 FDLYSEMIAK-GISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVD 271
+Y MI I NV Y +++ F G + +A+ L+ M +P+ V + L+D
Sbjct: 1153 RRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGALLD 1209
Query: 272 A 272
Sbjct: 1210 G 1210
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 18/300 (6%)
Query: 72 AISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIK 131
A SL QM + I ++ +I + + A +V +++ G PD +T +T+I
Sbjct: 985 AESLFNQMPVKDI----ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVIS 1040
Query: 132 GLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIKP 191
G L + H L GF LD + L++ K G E AL + + K
Sbjct: 1041 ACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP----KK 1096
Query: 192 TVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLL 251
+ +N+II+ L A ++++M + + PN VT+ ++ G + + +
Sbjct: 1097 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY 1156
Query: 252 DEMVLK-NIDPDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCL 310
M+ +I +V Y +V K G + EA ++ M +P+ V + +L+DG +
Sbjct: 1157 RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGALLDGCRI 1213
Query: 311 VNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLC----KIKMVDEALNLLEEMDYEKIIP 366
+ A FN + + P Y ++ + + + V E + E+ EKI P
Sbjct: 1214 HKNLVIAEIAFNKLMV--LEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICP 1271
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/493 (20%), Positives = 215/493 (43%), Gaps = 36/493 (7%)
Query: 51 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCHCYLGQTTSAFSV 110
PP + ++ +T+ + + +G P V N L+ + G A V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 111 LANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQVTYATLINGLCK 170
+ R D ++N ++ G G L A + D++ + D ++ ++ G K
Sbjct: 143 FDEMPNR----DLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVK 194
Query: 171 MGQTEAAL---ELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMIAKGISPN 227
Q E AL L++R+ +P + + + + VK + +++ ++ G+ +
Sbjct: 195 KDQPEEALVLYSLMQRVPNS--RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSD 252
Query: 228 VVTYSALI--YGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVREAKNM 285
V +S+L+ YG C G + +A + D++V K DVV++ ++D K + RE ++
Sbjct: 253 EVLWSSLMDMYGKC--GCIDEARNIFDKIVEK----DVVSWTSMIDRYFKSSRWREGFSL 306
Query: 286 LAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYNIMIYGLCK 345
+ ++ +P+ T++ +++ + + V M R G P + + ++ K
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 346 IKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQPADIIT 405
++ A ++++ P+ V+++SLI G + G+ A + D + G D +T
Sbjct: 367 CGNIESAKHVVDGCPK----PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 406 YNSFLDALCKGHHVDKGIALIKKIIDKG-IQPDMCTYNILLDGLCKCGRIKDAQEVFQDL 464
+ + L A V+KG+ I +K + Y L+D L + GR + + V ++
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 465 FKKGYNLNNWTYNTMINGLCKEG---LFDEALTLMSKMEDNGCIHDPITFETIISALFEK 521
K + + + +++ G G L +EA + K+E +P+T+ T+ +
Sbjct: 483 PMKP---SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE----NPVTYVTMANIYAAA 535
Query: 522 GENDKAEKLLREM 534
G+ ++ K+ + M
Sbjct: 536 GKWEEEGKMRKRM 548
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 172/403 (42%), Gaps = 61/403 (15%)
Query: 161 YATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYSEMI 220
+ I+ LC A++LL GR KP Y +I + + + ++ +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLL----GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 221 AKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEGKVR 280
G P +V ++ L+ + G L A + DEM + D+ ++N++V+ + G +
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP----NRDLCSWNVMVNGYAEVGLLE 168
Query: 281 EAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMAR-RGVTPNVQSYNIM 339
EA+ + M ++ D ++++++ GY ++ +A +++ M R PN+ + +I
Sbjct: 169 EARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 340 IYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVRGQ 399
+ +K + + + + ++V +SSL+D K G + A + D++ +
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK-- 282
Query: 400 PADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCTY------------------ 441
D++++ S +D K +G +L +++ +P+ T+
Sbjct: 283 --DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 442 -----------------NILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLC 484
+ L+D KCG I+ A+ V K +L +WT ++I G
Sbjct: 341 VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP--DLVSWT--SLIGGCA 396
Query: 485 KEGLFDEALTLMSKMEDNGCIHDPITFETIISA-----LFEKG 522
+ G DEAL + +G D +TF ++SA L EKG
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 11/258 (4%)
Query: 39 SFFNRMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPNFVTLNILINCH 98
S F+ ++ P F VL + + M G P + L++ +
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMY 364
Query: 99 CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLDQ 158
G SA V+ K PD +++ +LI G +G+ AL++ D +L G + D
Sbjct: 365 TKCGNIESAKHVVDGCPK----PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 159 VTYATLINGLCKMGQTEAALELLRRI-EGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
VT+ +++ G E LE I E + T Y ++D L + + S
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPD-VVTYNILVDALGKE 276
EM K P+ +++++ G G + A E+ I+P+ VTY + +
Sbjct: 481 EMPMK---PSKFLWASVLGGCSTYGNIDLAEEAAQELF--KIEPENPVTYVTMANIYAAA 535
Query: 277 GKVREAKNMLAVMIKQGV 294
GK E M M + GV
Sbjct: 536 GKWEEEGKMRKRMQEIGV 553
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 331 PNVQSYNIMIYGLCKIKMVDEALNLL--EEMDYEKII-------PNKVTYSSLIDGLCKT 381
PN + +++ LC+ EA+++L +++ E + P TY +LI +T
Sbjct: 39 PNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQT 98
Query: 382 GKVSNAWELLDEMHVRGQPADIITYNSFLDALCK-GHHVDKGIALIKKIIDKGIQPDMCT 440
+ ++ + + G I+ +N L K G VD +K+ D+ D+C+
Sbjct: 99 RALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD-----ARKVFDEMPNRDLCS 153
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
+N++++G + G +++A+++F ++ +K +++++ M+ G K+ +EAL L S M+
Sbjct: 154 WNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 209/498 (41%), Gaps = 96/498 (19%)
Query: 92 NILINCHCYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLA 151
N LI+ LG A V ++ ++ +T+T+ +I G +G A +D +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEK----NTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 152 QGFQL-DQVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVS 210
G + ++ + L+N LC A EL R++ G +K V + N I++S V +
Sbjct: 177 HGIRFTNERMFVCLLN-LC---SRRAEFELGRQVHGNMVK--VGVGNLIVES-SLVYFYA 229
Query: 211 HAFDLYSEMIAKGI--SPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNI 268
+L S + A + +V++++A+I G +AIG+ M+ P+ T
Sbjct: 230 QCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCS 289
Query: 269 LVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRG 328
++ A +E +R + + ++++K+ +K DV +SLMD Y E++ R VF+ M+ R
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR- 348
Query: 329 VTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTY----------------- 371
N ++ +I + +EA++L M +I N +T
Sbjct: 349 ---NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGK 405
Query: 372 ------------------SSLIDGLCKTGKVSNAWELLDEMHVRGQPADIITYNSFLDAL 413
S+L+ CK G+ +A+ +L ++ R D++++ + +
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR----DVVSWTAMISGC 461
Query: 414 CKGHHVDKGIALIKKIIDKGIQPDMCTYNILLDG-------------------------- 447
H + + +K++I +G++P+ TY+ L
Sbjct: 462 SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNV 521
Query: 448 ---------LCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSK 498
KCG + +A VF + +K NL +W MI G + G EAL LM +
Sbjct: 522 FVGSALIHMYAKCGFVSEAFRVFDSMPEK--NLVSW--KAMIMGYARNGFCREALKLMYR 577
Query: 499 MEDNGCIHDPITFETIIS 516
ME G D F TI+S
Sbjct: 578 MEAEGFEVDDYIFATILS 595
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 162/386 (41%), Gaps = 23/386 (5%)
Query: 43 RMLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPN-FVTLNILINCH--- 98
R M +I + V+++ + H AI + M PN F +IL C
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 99 -CYLGQTTSAFSVLANILKRGYHPDTITFNTLIKGLCLHGKLHRALQFHDDVLAQGFQLD 157
G+ + ++KR D +L+ G++ + D + + +
Sbjct: 299 ALRFGRQVHSL-----VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR----N 349
Query: 158 QVTYATLINGLCKMGQTEAALELLRRIEGRGIKPTVVMYNTIIDSLCKVKLVSHAFDLYS 217
VT+ ++I + G E A+ L R ++ R + + +I+ + V + +L++
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 218 EMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNIDPDVVTYNILVDALGKEG 277
++I I NV S L++ +C G+ + A +L ++ + DVV++ ++ G
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR----DVVSWTAMISGCSSLG 465
Query: 278 KVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDVFNAMARRGVTPNVQSYN 337
EA + L MI++GV+P+ TYSS + + R + + + NV +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525
Query: 338 IMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCKTGKVSNAWELLDEMHVR 397
+I+ K V EA + + M EK N V++ ++I G + G A +L+ M
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMP-EK---NLVSWKAMIMGYARNGFCREALKLMYRMEAE 581
Query: 398 GQPADIITYNSFLDALCKGHHVDKGI 423
G D + + L + C +D+ +
Sbjct: 582 GFEVDDYIFATIL-STCGDIELDEAV 606
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 154/377 (40%), Gaps = 59/377 (15%)
Query: 146 HDDVLAQGFQLDQVTYATLINGLCKMGQTEAALELLRRIEGRGIK----PTVVMYNTIID 201
DD + F ++V YA L L Q+ + L++RI +K + N +I
Sbjct: 72 QDD--SSSFDSERVDYALLAEWL----QSSNGMRLIKRIHAMALKCFDDQVIYFGNNLIS 125
Query: 202 SLCKVKLVSHAFDLYSEMIAKGISPNVVTYSALIYGFCIVGQLKQAIGLLDEMVLKNID- 260
S ++ + +A ++ M K N VT++A+I G+ G +A L ++ V I
Sbjct: 126 SCVRLGDLVYARKVFDSMPEK----NTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRF 181
Query: 261 PDVVTYNILVDALGKEGKVREAKNMLAVMIKQGVKPDVVTYSSLMDGYCLVNEVNKARDV 320
+ + L++ + + + + M+K GV +++ SSL+ Y E+ A
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRA 240
Query: 321 FNAMARRGVTPNVQSYNIMIYGLCKIKMVDEALNLLEEMDYEKIIPNKVTYSSLIDGLCK 380
F+ M + +V S+ +I + +A+ + M +PN+ T S++ C
Sbjct: 241 FDMMEEK----DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKA-CS 295
Query: 381 TGKVSNAWELLDEMHVRGQPADIITYNSFLDALCKGHHVDKGIALIKKIIDKGIQPDMCT 440
K AL G V ++ + I+ D+
Sbjct: 296 EEK----------------------------ALRFGRQVHS------LVVKRMIKTDVFV 321
Query: 441 YNILLDGLCKCGRIKDAQEVFQDLFKKGYNLNNWTYNTMINGLCKEGLFDEALTLMSKME 500
L+D KCG I D ++VF + N N T+ ++I +EG +EA++L M+
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGM----SNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 501 DNGCIHDPITFETIISA 517
I + +T +I+ A
Sbjct: 378 RRHLIANNLTVVSILRA 394