Miyakogusa Predicted Gene
- Lj0g3v0048299.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0048299.1 tr|G7KD04|G7KD04_MEDTR Cell division control
protein-like protein OS=Medicago truncatula GN=MTR_5g09,52.59,2e-19,no
description,NULL; NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE (NUCLEAR
VCP-LIKE PROTEIN),NULL; AAA-FA,CUFF.2241.1
(123 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C... 120 1e-28
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | ch... 64 3e-11
AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-274273... 62 6e-11
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 62 9e-11
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 61 2e-10
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3... 59 9e-10
AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B | chr2:1... 59 1e-09
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4... 57 4e-09
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 56 6e-09
AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453 REV... 55 8e-09
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 54 2e-08
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease... 53 4e-08
AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 | chr5:21563023... 52 1e-07
AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-1... 51 2e-07
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960214-19... 51 2e-07
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 50 3e-07
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle tripl... 49 7e-07
AT5G20000.1 | Symbols: | AAA-type ATPase family protein | chr5:... 49 8e-07
AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosph... 49 9e-07
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 48 1e-06
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1... 47 3e-06
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2... 47 3e-06
AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein ... 47 3e-06
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 47 4e-06
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 47 4e-06
AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 | chr2:12489911-1... 46 6e-06
AT4G23940.1 | Symbols: | FtsH extracellular protease family | c... 46 7e-06
>AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C |
chr3:231787-235057 FORWARD LENGTH=820
Length = 820
Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 82/123 (66%), Gaps = 7/123 (5%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A LRPGRFG LLYVPLP+ +ER ILK +ARKK ID SVDL+ I + C+ SGAD
Sbjct: 676 VDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAK-NNCEGFSGAD 734
Query: 61 LADLMNKAAMAALEEKWTSTETTSGPL------TIKTSHFEIALSEVSPSVSVMQQQFYQ 114
LA L+ KA A+EE S+E++ + TIKT HFE ALS VSPSV+ Q++ Y
Sbjct: 735 LAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYD 794
Query: 115 KLS 117
LS
Sbjct: 795 ALS 797
>AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 |
chr3:20993869-20998531 REVERSE LENGTH=1022
Length = 1022
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGRF +LLYV P+ +R ILK RK + + L + + K +GAD
Sbjct: 875 IDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASI--TKGYTGAD 932
Query: 61 LADLMNKAAMAALEEKWTSTETTSGPLTIKTSHFEIALSEVSPSVSVMQQQFYQKLSESF 120
++ + +AA+AALEE E I H + A+S++ P+ + Y+ LSE F
Sbjct: 933 ISLICREAAIAALEESLEMEE-------ISMRHLKAAISQIEPT----EILSYKALSEKF 981
Query: 121 K 121
+
Sbjct: 982 Q 982
>AT5G08470.1 | Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731
FORWARD LENGTH=1130
Length = 1130
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGR +LL PSP ER+ IL L+RK + +DL I + + SGAD
Sbjct: 993 LDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALM--TEGFSGAD 1050
Query: 61 LADLMNKAAMAALEE---KWTSTETTSGPLTIKTSHFEIALSEVSPSVSVMQQQ----FY 113
L L++ A +AA+ E + ET + P+ IA S+ PSVS ++Q Y
Sbjct: 1051 LQALLSDAQLAAVHEYLNREDKPETGTTPIITDPLLKSIA-SKTKPSVSETEKQKLYDIY 1109
Query: 114 QKLSESFKAA 123
+ +S K++
Sbjct: 1110 SQFLDSRKSS 1119
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGR +L+Y+PLP + R+ I K RK I VD+ A+ + + SGAD
Sbjct: 633 IDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKY--TQGFSGAD 690
Query: 61 LADLMNKAAMAALEEKW-----TSTETTSGPLT-----------IKTSHFEIALSEVSPS 104
+ ++ +A A+ E + P IK +HFE ++ S
Sbjct: 691 ITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRS 750
Query: 105 VSVMQQQFYQKLSESFK 121
VS + YQ +++ +
Sbjct: 751 VSDADIRKYQAFAQTLQ 767
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGR +L+Y+PLP + R+ I K RK + VD+ A+ + + SGAD
Sbjct: 632 IDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKY--TQGFSGAD 689
Query: 61 LADLMNKAAM---------------------AALEEKWTSTETTSGPLTIKTSHFEIALS 99
+ ++ +A A+EE E + I+ +HFE ++
Sbjct: 690 ITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSE----IRAAHFEESMK 745
Query: 100 EVSPSVSVMQQQFYQKLSESFK 121
SVS + YQ +++ +
Sbjct: 746 YARRSVSDADIRKYQAFAQTLQ 767
>AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr3:19723416-19726489 FORWARD LENGTH=815
Length = 815
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGR +L+Y+PLP R I K+ RK + VDL A+ + + SGAD
Sbjct: 633 IDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKY--TQGFSGAD 690
Query: 61 LADLMNKAAMAALEEKWTST-----ETTSGP----------LTIKTSHFEIALSEVSPSV 105
+ ++ ++ A+ E + P IK HFE ++ SV
Sbjct: 691 ITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSV 750
Query: 106 SVMQQQFYQKLSESFK 121
S + YQ +++ +
Sbjct: 751 SDADIRKYQAFAQTLQ 766
>AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B |
chr2:1117595-1120361 FORWARD LENGTH=603
Length = 603
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A++RPGRF +LYVP P R IL+ R T+ VDL I E +GA+
Sbjct: 439 IDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIA--EETDLFTGAE 496
Query: 61 LADLMNKAAMAALEEKWTSTETTSGPLTIKTSHFEIALSEVSPSVSVMQQQFYQKLSESF 120
L L ++ +L E +T + HF+ A S + P++++ + + Y ++
Sbjct: 497 LEGLCRESGTVSLRENIAAT-------AVFNRHFQTAKSSLKPALTIEEVETYSSFRKAA 549
Query: 121 K 121
K
Sbjct: 550 K 550
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+ R GRF L+ V P+ +R+ IL+ +K +D SVDL AI +C GAD
Sbjct: 177 IDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAI--SCNGYVGAD 234
Query: 61 LADLMNKAAMAALEEKWTSTETTSGPLTIKTSHFEIALSEVSPSVS 106
L L +A ++A ++ +S L + + F+IA S V PS++
Sbjct: 235 LEALCREATISA-------SKRSSDSLILTSQDFKIAKSVVGPSIN 273
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 |
chr5:4950411-4952777 REVERSE LENGTH=688
Length = 688
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGRF + + V LP R ILK +R K +D V L+ I SGAD
Sbjct: 375 LDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAM--RTPGFSGAD 432
Query: 61 LADLMNKAAMAA 72
LA+LMN+AA+ A
Sbjct: 433 LANLMNEAAILA 444
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGRF + + V P RV ILK +R K I VD + R +GAD
Sbjct: 401 LDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVAR--RTPGFTGAD 458
Query: 61 LADLMNKAAMAA 72
L +LMN+AA+ A
Sbjct: 459 LQNLMNEAAILA 470
>AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453
REVERSE LENGTH=941
Length = 941
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSP-NERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGA 59
+D A+LRPGRF KLLYV + + + R +LK L RK + V L ++ + + +GA
Sbjct: 809 IDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAK-KCPSTFTGA 867
Query: 60 DLADLMNKAAMAALEEKWTSTETTSGP--------LTIKTSHFEIALSEVSPSVSVMQQQ 111
D+ L A A + K + +++ P + ++ F A+ ++SPS+S+ + +
Sbjct: 868 DMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELK 927
Query: 112 FYQKLSESFKA 122
Y+ L + F+
Sbjct: 928 KYEMLRDQFQG 938
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGRF + + V P RV IL+ +R K + VD + + R +GAD
Sbjct: 413 LDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVAR--RTPGFTGAD 470
Query: 61 LADLMNKAAMAA 72
L +LMN+AA+ A
Sbjct: 471 LQNLMNEAAILA 482
>AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174692-13177064 FORWARD LENGTH=695
Length = 695
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGRF + + V +P R ILK A K D V L I SGAD
Sbjct: 378 LDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAM--RTPGFSGAD 435
Query: 61 LADLMNKAAMAALEEKWTS 79
LA+L+N+AA+ A TS
Sbjct: 436 LANLLNEAAILAGRRARTS 454
>AT5G53170.1 | Symbols: FTSH11 | FTSH protease 11 |
chr5:21563023-21567922 REVERSE LENGTH=806
Length = 806
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+ RPGRF + + VP P R IL+ + K + VD+ AI R +GAD
Sbjct: 509 LDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIAR--GTPGFNGAD 566
Query: 61 LADLMNKAAMAA 72
LA+L+N AA+ A
Sbjct: 567 LANLVNIAAIKA 578
>AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 |
chr2:11131939-11135126 REVERSE LENGTH=717
Length = 717
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D+A++RPGRF + + VP P R IL++ K VDL I R SGAD
Sbjct: 375 LDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIAR--GTPGFSGAD 432
Query: 61 LADLMNKAAMAA 72
LA+L+N AA+ A
Sbjct: 433 LANLVNVAALKA 444
>AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 |
chr1:1960214-1962525 REVERSE LENGTH=685
Length = 685
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGRF + + V +P R ILK + K ++ V L I SGAD
Sbjct: 371 LDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAM--RTPGFSGAD 428
Query: 61 LADLMNKAAMAA 72
LA+L+N+AA+ A
Sbjct: 429 LANLLNEAAILA 440
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTID--ASVDLNAIGRLEACKNLSG 58
+D A R R K LY+PLPS R I++ L +K + + D+N I L + SG
Sbjct: 349 LDEAARR--RLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNL--TEGYSG 404
Query: 59 ADLADLMNKAAMAALEEKWTS----TETTSGPLTIKT-SHFEIALSEVSPSVSVMQQQFY 113
+D+ +L+ A M L E T T + + T F+ AL EV PSVS + Y
Sbjct: 405 SDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFKDALQEVRPSVSQNELGIY 464
Query: 114 QKLSESF 120
+ + F
Sbjct: 465 ENWNNQF 471
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A
ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Length = 419
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D+A+LRPGR + + P P+ R ILK +RK + +DL I E SGA+
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIA--EKMNGASGAE 371
Query: 61 LADLMNKAAMAALEEKWTSTETTSGPLTIKTSHFEIALSEV 101
L + +A M AL E+ + FE+A+++V
Sbjct: 372 LKAVCTEAGMFALRERRVH---------VTQEDFEMAVAKV 403
>AT5G20000.1 | Symbols: | AAA-type ATPase family protein |
chr5:6756915-6759550 FORWARD LENGTH=419
Length = 419
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D+A+LRPGR + + P P+ R ILK +RK + +DL I E SGA+
Sbjct: 314 LDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIA--EKMNGASGAE 371
Query: 61 LADLMNKAAMAALEEKWTSTETTSGPLTIKTSHFEIALSEV 101
L + +A M AL E+ + FE+A+++V
Sbjct: 372 LKAVCTEAGMFALRERRVH---------VTQEDFEMAVAKV 403
>AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5088487-5095482
REVERSE LENGTH=1954
Length = 1954
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARK--KTIDASVDLNAIGRLEACKNLSG 58
+D A+ RPGRF + +Y PLPS ++R I+ RK K + + L I + A +G
Sbjct: 873 IDPALRRPGRFDREIYFPLPSVDDRAAIISLHTRKWPKPVSGYL-LKWIAKETA--GFAG 929
Query: 59 ADLADLMNKAAMAALEEKWTSTETTSGPLTIKTSHFEIALSEVSPSVSVMQQQFYQKLSE 118
AD+ L +AAM AL + E+ + +S AL PS SV ++ + + LS
Sbjct: 930 ADIQALCTQAAMIALNRSFPLQESLAAAELGVSSSNRAAL----PSFSVEERDWLEALSR 985
Query: 119 S 119
S
Sbjct: 986 S 986
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Length = 1210
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEA-CKNLSGA 59
+D A+ RPGRF + LP R IL RK + +L L A C GA
Sbjct: 535 IDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELKE--ELAATCVGYCGA 592
Query: 60 DLADLMNKAAMAALEEKWTSTETTS-------GPLTIKTSHFEIALSEVSPSV---SVMQ 109
DL L +AA+ A EK+ T+ G + ++ SHF A+S ++P+ SV+Q
Sbjct: 593 DLKALCTEAAIRAFREKYPQVYTSDDKYAIDVGLVNVEKSHFVEAMSAITPAAHRGSVVQ 652
Query: 110 QQ 111
+
Sbjct: 653 SR 654
>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
chr3:17332999-17336613 FORWARD LENGTH=802
Length = 802
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+ RPGRF +++ V P R IL+ KK + D+N +GAD
Sbjct: 477 LDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGAD 536
Query: 61 LADLMNKAAMAALEEKWTSTE 81
LA+L+N+AA+ A + T+ E
Sbjct: 537 LANLVNEAALLAGRKNKTNVE 557
>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
chr5:23770080-23773719 REVERSE LENGTH=806
Length = 806
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+ RPGRF +++ V P R ILK KK + D+N +GAD
Sbjct: 481 LDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGAD 540
Query: 61 LADLMNKAAMAA 72
LA+L+N+AA+ A
Sbjct: 541 LANLVNEAALLA 552
>AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein |
chr3:5521187-5524995 REVERSE LENGTH=876
Length = 876
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A++RPGRF + +++P P R+ IL+ ARKK + +D A+ + + GA+
Sbjct: 561 LDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASM--TDGMVGAE 618
Query: 61 LADLMNKAAMAALEEKWTSTET 82
LA+++ AA+ + + T T
Sbjct: 619 LANIVEIAAINMMRDGRTELTT 640
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGR + + +PLP+ R+ ILK A +D AI +L + +GAD
Sbjct: 291 LDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKL--GEGFNGAD 348
Query: 61 LADLMNKAAMAAL 73
L ++ +A M A+
Sbjct: 349 LRNICTEAGMFAI 361
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGR + + +PLP+ R+ ILK A +D AI +L + +GAD
Sbjct: 291 LDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKL--AEGFNGAD 348
Query: 61 LADLMNKAAMAAL 73
L ++ +A M A+
Sbjct: 349 LRNICTEAGMFAI 361
>AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 |
chr2:12489911-12492999 REVERSE LENGTH=809
Length = 809
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEA-CKNLSGA 59
+D+A+LRPGRF + + + P R I K +K +D + RL A +GA
Sbjct: 473 LDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYS-QRLAALTPGFAGA 531
Query: 60 DLADLMNKAAMAALEEKWTSTETTSGPLTIKTSHFEIALSEV 101
D+A++ N+AA+ A + T+ +HFE A+ V
Sbjct: 532 DIANVCNEAALIAARHEGA---------TVTMAHFESAIDRV 564
>AT4G23940.1 | Symbols: | FtsH extracellular protease family |
chr4:12437108-12441841 FORWARD LENGTH=946
Length = 946
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 MDRAVLRPGRFGKLLYVPLPSPNERVMILKTLARKKTIDASVDLNAIGRLEACKNLSGAD 60
+D A+LRPGRF + + V P+ R+ ILK A K + SVDL++ SGA
Sbjct: 589 LDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYA--SNLPGWSGAK 646
Query: 61 LADLMNKAAMAALEEKWTS 79
LA L+ +AA+ A+ + S
Sbjct: 647 LAQLVQEAALVAVRKTHNS 665