Miyakogusa Predicted Gene

Lj0g3v0048119.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0048119.1 Non Chatacterized Hit- tr|I1M102|I1M102_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,69.57,0,Homeodomain-like,Homeodomain-like; seg,NULL,CUFF.2242.1
         (1337 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G64570.1 | Symbols: DUO3 | Homeodomain-like superfamily prote...   399   e-111

>AT1G64570.1 | Symbols: DUO3 | Homeodomain-like superfamily protein |
            chr1:23978868-23983925 FORWARD LENGTH=1239
          Length = 1239

 Score =  399 bits (1026), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 312/855 (36%), Positives = 408/855 (47%), Gaps = 101/855 (11%)

Query: 447  SVHSVLDVSPLNFVRRYVNGIYSASQEFRKRYIESGCEFSFEKEPLFPSSSSFTEASTGV 506
            S  SVLDV  +    RY+  +  A Q++R+  +ESG + S ++ PLF   +   +   G 
Sbjct: 374  SASSVLDV--VGLAGRYLVDVSDAVQDYRRCQVESGFDTSSQRVPLF---TLPHQEVGGE 428

Query: 507  SSGTIPGAVRAVSTSPGQQQPKKTLAAMLVEST-KQSSALVPKEVAKLTQRFFSDLFNPE 565
                   +  +  +  GQQQ KKTLAA LVES  KQS ALV K++AKL +RF   LF   
Sbjct: 429  IVNYPLSSPSSSKSPSGQQQAKKTLAATLVESAQKQSVALVHKDIAKLAKRFMP-LFKVS 487

Query: 566  LFPHKPPPPAVVNRILFTDSEDELLSLGILEYNTDWKAIQQRFLPCKSKHQIFVRQKNRS 625
            L+PHKPP  AV NR+LFTD+EDELL+LGI+EYN+DWKAI+QRFLP K +HQI+VRQKNR 
Sbjct: 488  LYPHKPPHAAVANRVLFTDAEDELLALGIMEYNSDWKAIKQRFLPSKGEHQIYVRQKNRR 547

Query: 626  SAKASENPIKAVRRMKTSPLTAEEIACIQEGLKHYKFDWMSVWQFIVPYRDPALLPRQWR 685
            S+KA ENPIKAV RMK+SPLT +EI  IQEGLK++K+DW SVW+F+VPYRDP+LLPRQWR
Sbjct: 548  SSKAPENPIKAVLRMKSSPLTPQEILRIQEGLKYFKYDWTSVWKFVVPYRDPSLLPRQWR 607

Query: 686  VACGTQKSYKVDASKKDKRRSYESEXXXXXXXXXXXXXXISDKEDCEAEIMGSENCMDYS 745
             A G QKSYK+DA KK+KRR Y++                   +  E  + G    ++ S
Sbjct: 608  TALGIQKSYKLDAVKKEKRRLYDTNRKFREQQASAKEDRYGASKANEYHVGG--ELVESS 665

Query: 746  DVPYVHQAFLADWRPDTSAGTYSEHISSTSGEGNLARDAVSRENIQFYRAINDYGLSGKV 805
               Y+H+ FLADWRP       S  + S     ++  D              +  L G  
Sbjct: 666  GEAYLHEGFLADWRPGMPTFFSSAPMHSFDKAKDVPGDRHESVQTCIVEGSKNPELCGAQ 725

Query: 806  QHQNYQHAFP-FTPKFPQLFHTTSERSGTKGAPCADNPKNSVFTSSTNYYYRPYRSRKVN 864
                 Q   P F P +    HT+    G   AP                  RPYRSRKV 
Sbjct: 726  ILTCTQRLAPSFIPMY---RHTSGTAPGASKAPI---------------IARPYRSRKVF 767

Query: 865  NAHLVKLAPDLPPVNLPPSVRVVSQTAFKGFQCGTSKMYPPGGSVTGCRIDNIASQIPHG 924
            N  +V+LAPDLPPVNLP SVRV+SQ+ F   Q  TS           C I+   S +   
Sbjct: 768  NRSVVRLAPDLPPVNLPSSVRVISQSVFAKNQSETSS--------KTCIINGGMSDVSGR 819

Query: 925  EKYGTAHPVEGAGPVLNG--SVTGSQVERSGTAEGRSTVAEKSTCSELQMHPLLFQATNE 982
              +G   P   A    NG  S     ++    AE  S + ++S  S+LQMHPLLF+    
Sbjct: 820  GNFGIETPCFSADRDNNGPPSEKVVDLQEDVPAESSSGMDKQSNDSDLQMHPLLFRTPEH 879

Query: 983  GNIPYYPLKXXXXXXXXXXXXXXXQPQLNLSLFHS-SQKQSSIDCASKSLRSKNSMLRSA 1041
            G I  YP                 +PQL LSLF+S  Q   S D   ++  S        
Sbjct: 880  GQITCYP-ANRDPGGSSFSFFSENRPQL-LSLFNSPKQINHSADQLHRNSSSNEYETAQG 937

Query: 1042 GIDFHPLLQKFNDTQSQACS------------DDIQAESLVNSGVLATANRSSGLNDKSN 1089
             I FHPLLQ+     S   S            D +      +  V  TA   +G ND S 
Sbjct: 938  DICFHPLLQRTEYETSYVISRRGNLDPDIGKKDKLCQLQDTSGAVEKTAIPVTGRNDVSL 997

Query: 1090 E----------LDLDIHLSSVS---RNGKSVKSKQLEVQDPIGSKKTASTCGTAMKCQEN 1136
            E          ++LDI+LS+ S    NG SV                     +A    E 
Sbjct: 998  EPFSSSTPGKNVNLDIYLSTSSSKVNNGGSV---------------------SAANISEA 1036

Query: 1137 SVPCRQQGVENPTTSCCELTSSAPLVVPDDNITRYDVDDVGDQSHPGIVMXXXXXXXXXX 1196
               C  Q          E+  SAP   P DNI+R  ++++ DQS+ GIVM          
Sbjct: 1037 PDICMAQ-----LNDGSEVPGSAP---PSDNISRC-IEEMADQSNLGIVMEQEELSDSDD 1087

Query: 1197 XXXXHVXXXXXXXXXXXXXXXXXXXNALKVQNKEVPRDNPGTQVTNIATLDMGLTRE-GK 1255
                                         ++ ++  +DN  + V  I + D+   +E GK
Sbjct: 1088 EMMEEEHVEFECEEMADSEGEEGSECEENIEMQD--KDNRNS-VVEITSTDVDSGKELGK 1144

Query: 1256 DGKNKNSWLSLDSSS 1270
            D  N + WLSLD SS
Sbjct: 1145 DSPN-SPWLSLDPSS 1158



 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 146/331 (44%), Gaps = 21/331 (6%)

Query: 38  FNPFLKGTXXXXXXXXXXXEVDGLDGNVVNSASAELSKEKNCATVDSEHGEEEIVLQSPG 97
           FNPFLK +           EV+ LDG +VNS +          T++   G+E+I + S  
Sbjct: 46  FNPFLKDSPSREASSSLSSEVETLDGEIVNSITTV------PQTLEGRQGKEDIAMPSND 99

Query: 98  MISQSEANQEKDNGLTSLTDGNGFRRGELNKTTKPQSPVIDIDSDDAICKRTRARYSLAS 157
           +  Q     ++       T G     GE       +  ++  + DDAICKRTRARYSLAS
Sbjct: 100 VSCQEPPIPDER------TVGAANENGEQLVIQTQKQDLMSTEEDDAICKRTRARYSLAS 153

Query: 158 FXXXXXXXXXXXXXXXXXXXXXXXXXXYKKFLAAVLQDGDGD-GLSTHGXXXXXXXXXXX 216
           F                          Y+KFLAAVL  GD +  L+  G           
Sbjct: 154 FTLDDLEAFLQETDDEDDIPNVDDEEEYRKFLAAVLHSGDTEVPLAQTGTNDDDDDDDED 213

Query: 217 XXXXXXXXXXXXXXXXXXNAVVK--TQKEYDGSGRRPETRQNKRRKVSAQSERKPLGQFK 274
                               + +  T  +   + RRP TRQ +R+ +S   +     Q  
Sbjct: 214 NDLDFEIELEEALETDDEEIIPEKVTTGDNISTKRRPVTRQKRRQNISIHHKNNSPEQAG 273

Query: 275 RPLRPILPNWQNEPPASGKDLMPEANPSFQSSASGNAPVNGFTPAQIGQLHSLIHEHVQL 334
           R LRP++P     PP          + +   ++S N  +NGFT AQ+G+LHSLIH+H+QL
Sbjct: 274 RLLRPLVPILPIAPPGR------RVSATEAVASSENRTINGFTQAQMGELHSLIHDHLQL 327

Query: 335 LIQVFSLSVLDPPQKHTASQVQSLLFEMLHK 365
           LIQV+SL  LD  ++   + VQ LL EML +
Sbjct: 328 LIQVYSLCALDHSRQSIGTHVQGLLSEMLKQ 358