Miyakogusa Predicted Gene

Lj0g3v0047849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0047849.1 tr|Q0WNH0|Q0WNH0_ARATH Myosin heavy chain
OS=Arabidopsis thaliana GN=At5g54280 PE=2 SV=1,37.78,2e-19,
,TC63675.path1.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO...   247   3e-66
AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO...   247   3e-66
AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleo...   229   7e-61
AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220...   100   8e-22
AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220...   100   8e-22
AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleo...    90   6e-19

>AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD
            LENGTH=1166
          Length = 1166

 Score =  247 bits (630), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 129/169 (76%), Positives = 145/169 (85%), Gaps = 9/169 (5%)

Query: 1    MKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNH-RRQE 59
            MKSMEE+WQKQMRSLQSSLSIAKKSLA++DS R+SDASVNASD  D  WD  SN  R Q 
Sbjct: 999  MKSMEEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNASDATD--WDSSSNQFRSQT 1056

Query: 60   SNGTRS----TSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRL 115
            SNG  S     SAGLSVI R+AEEFEQR+QVFGDDAKFLVEVKSGQVEA+L+PD+ELRRL
Sbjct: 1057 SNGVGSRLQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPDRELRRL 1116

Query: 116  KQMFEAWKKDYGARLRETKVILNKLGSEDS--ALDKVKKSWWGRRNSTR 162
            KQMFE WKKDYG RLRETK+IL+KLGSE+S  +++KVK+ WWGRRNSTR
Sbjct: 1117 KQMFETWKKDYGGRLRETKLILSKLGSEESSGSMEKVKRKWWGRRNSTR 1165


>AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD
            LENGTH=1176
          Length = 1176

 Score =  247 bits (630), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 129/169 (76%), Positives = 145/169 (85%), Gaps = 9/169 (5%)

Query: 1    MKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNH-RRQE 59
            MKSMEE+WQKQMRSLQSSLSIAKKSLA++DS R+SDASVNASD  D  WD  SN  R Q 
Sbjct: 1009 MKSMEEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNASDATD--WDSSSNQFRSQT 1066

Query: 60   SNGTRS----TSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRL 115
            SNG  S     SAGLSVI R+AEEFEQR+QVFGDDAKFLVEVKSGQVEA+L+PD+ELRRL
Sbjct: 1067 SNGVGSRLQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPDRELRRL 1126

Query: 116  KQMFEAWKKDYGARLRETKVILNKLGSEDS--ALDKVKKSWWGRRNSTR 162
            KQMFE WKKDYG RLRETK+IL+KLGSE+S  +++KVK+ WWGRRNSTR
Sbjct: 1127 KQMFETWKKDYGGRLRETKLILSKLGSEESSGSMEKVKRKWWGRRNSTR 1175


>AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleoside
            triphosphate hydrolases superfamily protein |
            chr1:18650688-18657106 FORWARD LENGTH=1153
          Length = 1153

 Score =  229 bits (584), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 136/164 (82%), Gaps = 4/164 (2%)

Query: 1    MKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNHRRQES 60
            MKSMEE+WQKQM+SLQSSLSIAKKSL ++DS R+SDASVNASD  D   D G +H +   
Sbjct: 991  MKSMEEIWQKQMKSLQSSLSIAKKSLEVEDSARNSDASVNASDATD--LDSGGSHYQMGH 1048

Query: 61   NGTRSTSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFE 120
              +RS   GLSVISR+AEEF QR+QVFGDD KFL+EVKSGQVEA+LNPD+ELRRLKQMFE
Sbjct: 1049 GRSRSVGVGLSVISRLAEEFGQRAQVFGDDRKFLMEVKSGQVEANLNPDRELRRLKQMFE 1108

Query: 121  AWKKDYGARLRETKVILNKLGSEDS--ALDKVKKSWWGRRNSTR 162
             WKKDYG RLRETK+IL+KLGSE++  + +KVK +WWGR  STR
Sbjct: 1109 TWKKDYGGRLRETKLILSKLGSEETGGSAEKVKMNWWGRLRSTR 1152


>AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
            chr5:22039606-22044715 REVERSE LENGTH=1030
          Length = 1030

 Score = 99.8 bits (247), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 28/180 (15%)

Query: 1    MKSMEEVWQKQMRSLQSSLSIAKKSLAIDD------SERSSDASVNASDERDHSWDVGSN 54
            MKSMEE WQKQM SLQ SL+ A+KSLA +         + +  S    D  D +   G+ 
Sbjct: 856  MKSMEETWQKQMSSLQMSLAAARKSLAAESITGQAGGRQDTSISPFGYDSED-TMSTGTP 914

Query: 55   HRRQESNG----------TRSTSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEA 104
              R  +N            R  +  L+ ++ +A EF+QR   F +DA+ +VEVK G  +A
Sbjct: 915  GVRTPTNKFTNGNTPELRIRELNGSLNAVNHLAREFDQRRLNFDEDARAIVEVKLGP-QA 973

Query: 105  SLN------PDQELRRLKQMFEAWKKDYGARLRETKVILNKLGSEDSALDKVKKSWWGRR 158
            + N      P+ E RRLK  FE WKKDY ARLR+TK  L+++  +        + WWG+R
Sbjct: 974  TPNGQQQQHPEDEFRRLKLRFETWKKDYKARLRDTKARLHRVDGDKGR----HRKWWGKR 1029


>AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
            chr5:22039606-22045592 REVERSE LENGTH=1220
          Length = 1220

 Score = 99.8 bits (247), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 28/180 (15%)

Query: 1    MKSMEEVWQKQMRSLQSSLSIAKKSLAIDD------SERSSDASVNASDERDHSWDVGSN 54
            MKSMEE WQKQM SLQ SL+ A+KSLA +         + +  S    D  D +   G+ 
Sbjct: 1046 MKSMEETWQKQMSSLQMSLAAARKSLAAESITGQAGGRQDTSISPFGYDSED-TMSTGTP 1104

Query: 55   HRRQESNG----------TRSTSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEA 104
              R  +N            R  +  L+ ++ +A EF+QR   F +DA+ +VEVK G  +A
Sbjct: 1105 GVRTPTNKFTNGNTPELRIRELNGSLNAVNHLAREFDQRRLNFDEDARAIVEVKLGP-QA 1163

Query: 105  SLN------PDQELRRLKQMFEAWKKDYGARLRETKVILNKLGSEDSALDKVKKSWWGRR 158
            + N      P+ E RRLK  FE WKKDY ARLR+TK  L+++  +        + WWG+R
Sbjct: 1164 TPNGQQQQHPEDEFRRLKLRFETWKKDYKARLRDTKARLHRVDGDKGR----HRKWWGKR 1219


>AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleoside
            triphosphate hydrolases superfamily protein |
            chr4:13694881-13700780 REVERSE LENGTH=1134
          Length = 1134

 Score = 90.1 bits (222), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 20/158 (12%)

Query: 1    MKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNHRRQES 60
            MKSME+ WQK M S+Q SL+ A K LA D +      + + +D  D +   G+       
Sbjct: 995  MKSMEDTWQKHMSSMQMSLAAACKVLAPDKT------ASHGTDSED-TMSFGT------- 1040

Query: 61   NGTRSTSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFE 120
              T+     LS ++ ++ EF+QRS +  +D K LVEVKS  +       +ELRRLK  FE
Sbjct: 1041 -PTKELKGSLSDVNNLSTEFDQRSVIIHEDPKSLVEVKSDSISNRKQHAEELRRLKSRFE 1099

Query: 121  AWKKDYGARLRETKVILNKLGSEDSALDKVKKSWWGRR 158
             WKKDY  RLRETK  +   G E        ++WW ++
Sbjct: 1100 KWKKDYKTRLRETKARVRLNGDEGR-----HRNWWCKK 1132