Miyakogusa Predicted Gene

Lj0g3v0047059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0047059.1 Non Chatacterized Hit- tr|I1JAE1|I1JAE1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38758 PE,75.29,0,no
description,Zinc finger, RING/FYVE/PHD-type; coiled-coil,NULL; E3
UBIQUITIN-PROTEIN LIGASE
UBR7,N,NODE_22778_length_1623_cov_79.507698.path1.1
         (425 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23860.3 | Symbols:  | PHD finger protein-related | chr4:1240...   414   e-116
AT4G23860.2 | Symbols:  | PHD finger protein-related | chr4:1240...   414   e-116
AT4G23860.1 | Symbols:  | PHD finger protein-related | chr4:1240...   414   e-116

>AT4G23860.3 | Symbols:  | PHD finger protein-related |
           chr4:12409336-12411336 FORWARD LENGTH=452
          Length = 452

 Score =  414 bits (1063), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/452 (48%), Positives = 275/452 (60%), Gaps = 43/452 (9%)

Query: 10  DEAEQAITIGXXXXXXXXXXLVADLILGGDAGKECTYNKGYMKRQAIFSCLTCTPDGNAG 69
           DEAE  ITI           L ADL+LGGD G ECT+ KGYMKRQAIFSC+TCTP+GNAG
Sbjct: 8   DEAEGTITINEYIERLDAEELAADLVLGGDEGDECTFPKGYMKRQAIFSCITCTPEGNAG 67

Query: 70  VCTACSLSCHDGHQVVELWTKRNFRCDCGNSKFGEFYCKIFPSKDVENSENAYNHNFKGL 129
           +CTAC LSCHDGH+++ELWTKRNFRCDCGNSKFG   CK+ PSKD+ENSEN+YNHNFKGL
Sbjct: 68  ICTACCLSCHDGHELLELWTKRNFRCDCGNSKFGTLACKLLPSKDIENSENSYNHNFKGL 127

Query: 130 YCTCGLPYPGLDVEEQVEMIQCCLCEDWFHVEHLGLESSD----EIPRDDEEKVPFCEEF 185
           YCTC  PYP  +VEEQVEMIQCCLCEDWFH EHLGL  SD    +IPRD EE  P  E+F
Sbjct: 128 YCTCDRPYPDPNVEEQVEMIQCCLCEDWFHEEHLGLTPSDSVGSQIPRD-EESEPIYEDF 186

Query: 186 MCKACSEVCSFLKLYPEGI-LATRRKPEAPVQVSKDKSVLEDNPSTCESEKPIGDTSSCS 244
           +C+ CS  CSFL LYPE + +  +           +   L+ N    E  +P   T +  
Sbjct: 187 ICQNCSPACSFLTLYPENLWVVAKVDSTGSANACSETIELDKNHMDSEPGQPENGTDAEK 246

Query: 245 SAKIDDAQVTADSESVSGGKGLPLGGDCCNSVTLNQCSESSNKH---------------- 288
           S     ++  +DSE      G P  G       + +CSE  ++                 
Sbjct: 247 SVVGKCSETISDSEP-----GQPENGTEAEKSVVQKCSEKIDESEAGQPENSTEAEKFVV 301

Query: 289 ---------------ASCLLGVNLVAASPAIYGKPMFLSKNWRDALCKCDNCLEFYNQKQ 333
                          A C++  +L  + P    KP+FL+KNWR+ LC+C+ CLE Y Q++
Sbjct: 302 RKCSEKIDGSENVPAAGCVIRTDL-NSCPEFEKKPLFLTKNWRNILCRCEKCLEMYKQRK 360

Query: 334 IAFLLDKEDTILEYEKMAXXXXXXXXXXXEVADLGLFNNLGHVAKVEILKGIEDMKDGLR 393
           +++LLD EDTI+EYEK A           E   L L NNL HV+KVE+L GI+D +DGL+
Sbjct: 361 VSYLLDAEDTIVEYEKKAKEKRTEKLEKQEGEALDLLNNLDHVSKVELLHGIKDFQDGLQ 420

Query: 394 TFLESADTSKPISVDDVHQFFDEMKKKRRRVQ 425
             +ESA  SK I+  D+ Q F ++K KR+R++
Sbjct: 421 GLMESAGPSKAITSADIEQMFSKLKNKRKRME 452


>AT4G23860.2 | Symbols:  | PHD finger protein-related |
           chr4:12409336-12411336 FORWARD LENGTH=452
          Length = 452

 Score =  414 bits (1063), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/452 (48%), Positives = 275/452 (60%), Gaps = 43/452 (9%)

Query: 10  DEAEQAITIGXXXXXXXXXXLVADLILGGDAGKECTYNKGYMKRQAIFSCLTCTPDGNAG 69
           DEAE  ITI           L ADL+LGGD G ECT+ KGYMKRQAIFSC+TCTP+GNAG
Sbjct: 8   DEAEGTITINEYIERLDAEELAADLVLGGDEGDECTFPKGYMKRQAIFSCITCTPEGNAG 67

Query: 70  VCTACSLSCHDGHQVVELWTKRNFRCDCGNSKFGEFYCKIFPSKDVENSENAYNHNFKGL 129
           +CTAC LSCHDGH+++ELWTKRNFRCDCGNSKFG   CK+ PSKD+ENSEN+YNHNFKGL
Sbjct: 68  ICTACCLSCHDGHELLELWTKRNFRCDCGNSKFGTLACKLLPSKDIENSENSYNHNFKGL 127

Query: 130 YCTCGLPYPGLDVEEQVEMIQCCLCEDWFHVEHLGLESSD----EIPRDDEEKVPFCEEF 185
           YCTC  PYP  +VEEQVEMIQCCLCEDWFH EHLGL  SD    +IPRD EE  P  E+F
Sbjct: 128 YCTCDRPYPDPNVEEQVEMIQCCLCEDWFHEEHLGLTPSDSVGSQIPRD-EESEPIYEDF 186

Query: 186 MCKACSEVCSFLKLYPEGI-LATRRKPEAPVQVSKDKSVLEDNPSTCESEKPIGDTSSCS 244
           +C+ CS  CSFL LYPE + +  +           +   L+ N    E  +P   T +  
Sbjct: 187 ICQNCSPACSFLTLYPENLWVVAKVDSTGSANACSETIELDKNHMDSEPGQPENGTDAEK 246

Query: 245 SAKIDDAQVTADSESVSGGKGLPLGGDCCNSVTLNQCSESSNKH---------------- 288
           S     ++  +DSE      G P  G       + +CSE  ++                 
Sbjct: 247 SVVGKCSETISDSEP-----GQPENGTEAEKSVVQKCSEKIDESEAGQPENSTEAEKFVV 301

Query: 289 ---------------ASCLLGVNLVAASPAIYGKPMFLSKNWRDALCKCDNCLEFYNQKQ 333
                          A C++  +L  + P    KP+FL+KNWR+ LC+C+ CLE Y Q++
Sbjct: 302 RKCSEKIDGSENVPAAGCVIRTDL-NSCPEFEKKPLFLTKNWRNILCRCEKCLEMYKQRK 360

Query: 334 IAFLLDKEDTILEYEKMAXXXXXXXXXXXEVADLGLFNNLGHVAKVEILKGIEDMKDGLR 393
           +++LLD EDTI+EYEK A           E   L L NNL HV+KVE+L GI+D +DGL+
Sbjct: 361 VSYLLDAEDTIVEYEKKAKEKRTEKLEKQEGEALDLLNNLDHVSKVELLHGIKDFQDGLQ 420

Query: 394 TFLESADTSKPISVDDVHQFFDEMKKKRRRVQ 425
             +ESA  SK I+  D+ Q F ++K KR+R++
Sbjct: 421 GLMESAGPSKAITSADIEQMFSKLKNKRKRME 452


>AT4G23860.1 | Symbols:  | PHD finger protein-related |
           chr4:12409336-12411336 FORWARD LENGTH=452
          Length = 452

 Score =  414 bits (1063), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/452 (48%), Positives = 275/452 (60%), Gaps = 43/452 (9%)

Query: 10  DEAEQAITIGXXXXXXXXXXLVADLILGGDAGKECTYNKGYMKRQAIFSCLTCTPDGNAG 69
           DEAE  ITI           L ADL+LGGD G ECT+ KGYMKRQAIFSC+TCTP+GNAG
Sbjct: 8   DEAEGTITINEYIERLDAEELAADLVLGGDEGDECTFPKGYMKRQAIFSCITCTPEGNAG 67

Query: 70  VCTACSLSCHDGHQVVELWTKRNFRCDCGNSKFGEFYCKIFPSKDVENSENAYNHNFKGL 129
           +CTAC LSCHDGH+++ELWTKRNFRCDCGNSKFG   CK+ PSKD+ENSEN+YNHNFKGL
Sbjct: 68  ICTACCLSCHDGHELLELWTKRNFRCDCGNSKFGTLACKLLPSKDIENSENSYNHNFKGL 127

Query: 130 YCTCGLPYPGLDVEEQVEMIQCCLCEDWFHVEHLGLESSD----EIPRDDEEKVPFCEEF 185
           YCTC  PYP  +VEEQVEMIQCCLCEDWFH EHLGL  SD    +IPRD EE  P  E+F
Sbjct: 128 YCTCDRPYPDPNVEEQVEMIQCCLCEDWFHEEHLGLTPSDSVGSQIPRD-EESEPIYEDF 186

Query: 186 MCKACSEVCSFLKLYPEGI-LATRRKPEAPVQVSKDKSVLEDNPSTCESEKPIGDTSSCS 244
           +C+ CS  CSFL LYPE + +  +           +   L+ N    E  +P   T +  
Sbjct: 187 ICQNCSPACSFLTLYPENLWVVAKVDSTGSANACSETIELDKNHMDSEPGQPENGTDAEK 246

Query: 245 SAKIDDAQVTADSESVSGGKGLPLGGDCCNSVTLNQCSESSNKH---------------- 288
           S     ++  +DSE      G P  G       + +CSE  ++                 
Sbjct: 247 SVVGKCSETISDSEP-----GQPENGTEAEKSVVQKCSEKIDESEAGQPENSTEAEKFVV 301

Query: 289 ---------------ASCLLGVNLVAASPAIYGKPMFLSKNWRDALCKCDNCLEFYNQKQ 333
                          A C++  +L  + P    KP+FL+KNWR+ LC+C+ CLE Y Q++
Sbjct: 302 RKCSEKIDGSENVPAAGCVIRTDL-NSCPEFEKKPLFLTKNWRNILCRCEKCLEMYKQRK 360

Query: 334 IAFLLDKEDTILEYEKMAXXXXXXXXXXXEVADLGLFNNLGHVAKVEILKGIEDMKDGLR 393
           +++LLD EDTI+EYEK A           E   L L NNL HV+KVE+L GI+D +DGL+
Sbjct: 361 VSYLLDAEDTIVEYEKKAKEKRTEKLEKQEGEALDLLNNLDHVSKVELLHGIKDFQDGLQ 420

Query: 394 TFLESADTSKPISVDDVHQFFDEMKKKRRRVQ 425
             +ESA  SK I+  D+ Q F ++K KR+R++
Sbjct: 421 GLMESAGPSKAITSADIEQMFSKLKNKRKRME 452