Miyakogusa Predicted Gene

Lj0g3v0047049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0047049.1 Non Chatacterized Hit- tr|D7U601|D7U601_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.19,1e-18,seg,NULL,NODE_73038_length_353_cov_109.872520.path1.1
         (78 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27435.1 | Symbols:  | unknown protein; Has 16 Blast hits to ...    97   2e-21

>AT1G27435.1 | Symbols:  | unknown protein; Has 16 Blast hits to
          16 proteins in 8 species: Archae - 0; Bacteria - 0;
          Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
          Eukaryotes - 0 (source: NCBI BLink). |
          chr1:9527956-9528814 REVERSE LENGTH=81
          Length = 81

 Score = 97.1 bits (240), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 54/75 (72%)

Query: 3  GAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKATXXXXXXXX 62
          GAFWGTRVME+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQNEAVL+A         
Sbjct: 6  GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQNEAVLRACGESDAPNP 65

Query: 63 XXXXADEAIDNATKS 77
                ++  NA K+
Sbjct: 66 PGASNTKSSSNAVKN 80