Miyakogusa Predicted Gene

Lj0g3v0046689.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0046689.1 tr|G7ZY41|G7ZY41_MEDTR Vascular protein
OS=Medicago truncatula GN=MTR_066s1023 PE=4 SV=1,89.33,0,
,NODE_23204_length_1104_cov_134.116852.path1.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50590.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   371   e-103

>AT3G50590.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr3:18771292-18779220 FORWARD LENGTH=1614
          Length = 1614

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 172/254 (67%), Positives = 206/254 (81%), Gaps = 2/254 (0%)

Query: 1   MEGHAKISPISRVPLITVLDTKHHLNDFPVCEPFHLELNFFNKANRVLHYPARAFYVDGL 60
           MEGHAK +PISR+PLITV+DTK  L D PVC+PFHLELNFFNK NRVLHYP R+FY++GL
Sbjct: 420 MEGHAKTAPISRLPLITVVDTKDQLKDIPVCQPFHLELNFFNKPNRVLHYPVRSFYIEGL 479

Query: 61  NLMAHNLSSGSDSIYRKLYNSIPGSVEYRAKYLVYSKKQRLFLVVYEFSGATNEVVFYWE 120
           NLMAHNL SG+D+IY+KLY SIPG+VEY +K++VYS+K+ LFLVV+EFSGATNEVV YWE
Sbjct: 480 NLMAHNLCSGTDNIYKKLYTSIPGNVEYHSKHIVYSRKRHLFLVVFEFSGATNEVVLYWE 539

Query: 121 NTDAQTANSKSSTVKGRDAAFIGSNENQFAILDDDRTGLAVYTLPGGASKEAKDNDKVFE 180
           NT +Q  NSK ST KG DAAFIG N++QFAILD+D+TGL++Y LP   + E  + + + E
Sbjct: 540 NTGSQLPNSKGSTAKGCDAAFIGPNDDQFAILDEDKTGLSMYILPKLTTMEENEKNLLSE 599

Query: 181 ENQPAETSVGSIRGPTPFMFETEVDRIFSTPIDSTLMFASHGNQIGQVKLIQGYRLSTST 240
           ENQ  E     I+GP  FMFETEVDR+FSTPI+STLMFA +G QIG  KL QGYRLS S 
Sbjct: 600 ENQKKEADPSGIQGPQQFMFETEVDRVFSTPIESTLMFACNGTQIGLAKLFQGYRLSAS- 658

Query: 241 ANGHYISTNSEGKK 254
            +GHYIST  EG+K
Sbjct: 659 -DGHYISTQGEGRK 671