Miyakogusa Predicted Gene

Lj0g3v0046519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0046519.1 Non Chatacterized Hit- tr|I3SZT3|I3SZT3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,83.78,0.000000003,
,gene.Ljchr0_pseudomol_20120828.path1.gene4277.1
         (37 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26670.3 | Symbols:  | Protein of unknown function (DUF803) |...    64   2e-11
AT3G26670.2 | Symbols:  | Protein of unknown function (DUF803) |...    64   2e-11
AT3G26670.1 | Symbols:  | Protein of unknown function (DUF803) |...    64   2e-11

>AT3G26670.3 | Symbols:  | Protein of unknown function (DUF803) |
          chr3:9798236-9800562 REVERSE LENGTH=441
          Length = 441

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 33/37 (89%)

Query: 1  MGEWIVGAFINLFGSIAINFGTNLLKLGHNEGGNYAM 37
          MGEW++GAFIN+FGS+AINFGTNLLKLGHNE    A+
Sbjct: 1  MGEWVIGAFINIFGSVAINFGTNLLKLGHNERERLAL 37


>AT3G26670.2 | Symbols:  | Protein of unknown function (DUF803) |
          chr3:9798236-9800562 REVERSE LENGTH=441
          Length = 441

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 33/37 (89%)

Query: 1  MGEWIVGAFINLFGSIAINFGTNLLKLGHNEGGNYAM 37
          MGEW++GAFIN+FGS+AINFGTNLLKLGHNE    A+
Sbjct: 1  MGEWVIGAFINIFGSVAINFGTNLLKLGHNERERLAL 37


>AT3G26670.1 | Symbols:  | Protein of unknown function (DUF803) |
          chr3:9798236-9800562 REVERSE LENGTH=441
          Length = 441

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 33/37 (89%)

Query: 1  MGEWIVGAFINLFGSIAINFGTNLLKLGHNEGGNYAM 37
          MGEW++GAFIN+FGS+AINFGTNLLKLGHNE    A+
Sbjct: 1  MGEWVIGAFINIFGSVAINFGTNLLKLGHNERERLAL 37