Miyakogusa Predicted Gene

Lj0g3v0045609.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0045609.2 Non Chatacterized Hit- tr|K0T1T8|K0T1T8_THAOC
Uncharacterized protein (Fragment) OS=Thalassiosira
oc,32.22,8e-19,NAD_kinase,Inorganic polyphosphate/ATP-NAD kinase,
predicted; SUBFAMILY NOT NAMED,NULL; FAMILY NOT N,CUFF.2107.2
         (302 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G78590.1 | Symbols: NADK3, ATNADK-3 | NAD(H) kinase 3 | chr1:...   342   3e-94

>AT1G78590.1 | Symbols: NADK3, ATNADK-3 | NAD(H) kinase 3 |
           chr1:29564343-29566128 FORWARD LENGTH=317
          Length = 317

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 172/307 (56%), Positives = 215/307 (70%), Gaps = 13/307 (4%)

Query: 1   MKRLLLLLKPFSVSAPPPH---------THPQILHFLDSRRKVHHDTINFCEAILKKKSV 51
           +++LLLLLKP     P P           +PQ+L +L+SR KVH + I FC+ IL KK V
Sbjct: 3   IRKLLLLLKPID---PYPFLQTEGASLIKNPQVLQYLESRCKVHKNAIKFCQEILSKKPV 59

Query: 52  EWKAVPRNNLSQPINEXXXXXXXXXXXXXXQASHFMDDKIPVLGVNSDPTRIDEVEQFSS 111
           EWK + RN+LS PI +               ASHF+DD +PVLGVNSDPT+  EVE+ S 
Sbjct: 60  EWKPISRNDLSHPIRDVDMVITVGGDGTLLHASHFIDDSVPVLGVNSDPTQAHEVEELSD 119

Query: 112 EFDASRSTGHLCAATAENFEQVLDGILEDQIVPSKLTRIKISVNAGDLSTYALNDILVAH 171
           +FDASRSTGHLCAAT ENFEQVLD IL  ++VP+K++RI + +N+  L ++ALNDIL+A 
Sbjct: 120 QFDASRSTGHLCAATVENFEQVLDDILFGRVVPAKVSRISLKLNSETLLSHALNDILIAQ 179

Query: 172 PCPAALSRFSFRIM-KDGQPGSRLVNCRSSGLRVSTAAGSTAAMLSAGGFPMPILSQDLQ 230
           PCPAA+SRFSF+I  KDG    + VNCRSSGLR+ TAAGSTAAM SAGGF MP+LS+DLQ
Sbjct: 180 PCPAAVSRFSFKIKNKDGASSPKTVNCRSSGLRICTAAGSTAAMQSAGGFVMPMLSRDLQ 239

Query: 231 YMVREPISPGAVSDSMHGLIKDDDTLNTNWSCGKGVIYIDGSHINYTVEDGDIIEISSKA 290
           +MVREPISPG+ +  MH   K D  ++ NW    G IYIDG  + ++V+ GD IEISS A
Sbjct: 240 FMVREPISPGSTASLMHSTFKPDQFMDVNWYSDHGTIYIDGCQVQHSVQLGDTIEISSDA 299

Query: 291 PSLKVFL 297
           P L VFL
Sbjct: 300 PVLNVFL 306