Miyakogusa Predicted Gene

Lj0g3v0044669.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0044669.1 Non Chatacterized Hit- tr|D8TGJ6|D8TGJ6_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,43.33,0.000000000000001,coiled-coil,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.2073.1
         (275 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55750.1 | Symbols:  | BSD domain (BTF2-like transcription fa...   233   1e-61
AT3G61420.1 | Symbols:  | BSD domain (BTF2-like transcription fa...   225   3e-59

>AT1G55750.1 | Symbols:  | BSD domain (BTF2-like transcription
           factors, Synapse-associated proteins and DOS2-like
           proteins) | chr1:20840449-20845135 REVERSE LENGTH=591
          Length = 591

 Score =  233 bits (594), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/294 (45%), Positives = 178/294 (60%), Gaps = 32/294 (10%)

Query: 1   MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDI---- 56
           MEADQGDDYTHL DH I RDG+ ++ E Q+   +R+LLQDLNR  AVVLEGR++D+    
Sbjct: 287 MEADQGDDYTHLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESED 346

Query: 57  --------METEYIHESDG-VREEARRNRISTMTQI---EDLQAQDDHPFAPLCIKDPRD 104
                      + + ++DG   ++A + R+  M+++   EDLQA  + P APL IKDPRD
Sbjct: 347 TRIVAEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRD 406

Query: 105 YFGSQQAN------GSLG---SDEEAYGYLRASISKIKAKGLKDPLLSSEIALNGL--MT 153
           YF SQQ N      G+ G   +  EAYG L+ SI +I+A GL DPL+  E++      +T
Sbjct: 407 YFESQQGNVLNVPRGAKGLKRNVHEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLT 466

Query: 154 KNVXXXXXXXXXXXXXXXQEISDHDSLPSTMRDELLDHLRCSQELLRHFWSSYPITTRHL 213
           + +                  S  D LP + +DE+L H    QELL+HFWSSYPITT +L
Sbjct: 467 RTIATAKNINGKNPRE-----SFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYL 521

Query: 214 INKTRRLKEAISQLYSKLEEIKVSAHFDLRHQVSVFVHPMQQSLEAALLHYDAD 267
             K  +LK+A+S  YSKLE +K S   DLRHQVS+ V PMQQ+L+AA  HY+ D
Sbjct: 522 HTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVD 575


>AT3G61420.1 | Symbols:  | BSD domain (BTF2-like transcription
           factors, Synapse-associated proteins and DOS2-like
           proteins) | chr3:22727235-22731760 REVERSE LENGTH=579
          Length = 579

 Score =  225 bits (573), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/292 (44%), Positives = 176/292 (60%), Gaps = 28/292 (9%)

Query: 1   MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDI---- 56
           M+AD+GDDYTHL DH I RDG+ +I E Q+   +R+LLQDLNR  AVVLEGR +++    
Sbjct: 282 MDADEGDDYTHLMDHGIQRDGTNDIIEPQNDQLKRSLLQDLNRHAAVVLEGRCINVQSED 341

Query: 57  --------METEYIHESDG-VREEA---RRNRISTMTQIEDLQAQDDHPFAPLCIKDPRD 104
                      + + ++DG + ++A   R  R+S  T++EDLQA  + P APL IKDPRD
Sbjct: 342 TRIVAEALTRAKQVSKADGEITKDANQERLERMSRATEMEDLQAPQNFPLAPLSIKDPRD 401

Query: 105 YFGSQQAN------GSLGSDE---EAYGYLRASISKIKAKGLKDPLLSSEIALNGLMTKN 155
           YF SQQ N      G+  S     EAYG L+ SI  I+  GL DPL+  E++    +  +
Sbjct: 402 YFESQQGNILSEPRGAKASKRNVHEAYGLLKESILVIRMTGLSDPLIKPEVSFE--VFSS 459

Query: 156 VXXXXXXXXXXXXXXXQEISDHDSLPSTMRDELLDHLRCSQELLRHFWSSYPITTRHLIN 215
           +               QE S  D LP + +DE++ H    QEL+RHFWSSYPITT +L  
Sbjct: 460 LTRTISTAKNILGKNPQE-SFLDRLPKSTKDEVIHHWTSIQELVRHFWSSYPITTTYLST 518

Query: 216 KTRRLKEAISQLYSKLEEIKVSAHFDLRHQVSVFVHPMQQSLEAALLHYDAD 267
           K  +LK+A+S  YS L+ +K S   DLRHQVS+ V PMQQ+L+AA  HY++D
Sbjct: 519 KVGKLKDAMSNTYSLLDAMKQSVQSDLRHQVSLLVRPMQQALDAAFQHYESD 570