Miyakogusa Predicted Gene

Lj0g3v0043989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0043989.1 tr|Q9LMI5|Q9LMI5_ARATH At1g06340 OS=Arabidopsis
thaliana GN=T2D23.4 PE=2 SV=1,41.22,1e-18,Tudor-like domain present in
plant sequences,Tudor-like, plant; Agenet,Agenet-like
domain,NODE_64103_length_563_cov_49.799290.path1.1
         (146 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06340.1 | Symbols:  | Plant Tudor-like protein | chr1:193358...    97   3e-21
AT1G09320.1 | Symbols:  | agenet domain-containing protein | chr...    75   1e-14
AT3G06520.1 | Symbols:  | agenet domain-containing protein | chr...    75   2e-14
AT1G26540.1 | Symbols:  | Agenet domain-containing protein | chr...    53   9e-08
AT2G47230.1 | Symbols: DUF6, ATDUF6 | DOMAIN OF UNKNOWN FUNCTION...    51   3e-07
AT2G47230.2 | Symbols: DUF6 | DOMAIN OF UNKNOWN FUNCTION 724 6 |...    51   3e-07
AT1G11420.1 | Symbols: ATDUF2, DUF2 | DOMAIN OF UNKNOWN FUNCTION...    49   1e-06

>AT1G06340.1 | Symbols:  | Plant Tudor-like protein |
           chr1:1933583-1933987 REVERSE LENGTH=134
          Length = 134

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 6/131 (4%)

Query: 13  GDEVEVIGKEEGFYTSYYEATVVSLLPFGR-YEVQYKTLIVDEETKIPLKEAVLAKDLRP 71
           GD+VEV  KE+GF  SY+ ATVVS  P G  Y+++YK L+ D +    L E + A +LRP
Sbjct: 6   GDQVEVCSKEDGFLGSYFGATVVSKTPEGSYYKIKYKNLVSDTDQSKRLVEVISADELRP 65

Query: 72  VPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCSRI 131
           +PP  +     +    V+ FD DGWW    VG ++      Y+VYFS+T+E L Y    +
Sbjct: 66  MPPK-SLHVLIRCGDKVDAFDKDGWW----VGEVTAVRRNIYSVYFSTTDEELEYPLYSL 120

Query: 132 RVHHEFFDAEW 142
           R HHE+ +  W
Sbjct: 121 RKHHEWVNGSW 131


>AT1G09320.1 | Symbols:  | agenet domain-containing protein |
           chr1:3010270-3012228 REVERSE LENGTH=517
          Length = 517

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 6/144 (4%)

Query: 1   MRPPQRT--VVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKI 58
           +RP + T    + +G  +EV  +EEGF  S++ A ++      +  V+Y  L   E+ K 
Sbjct: 369 VRPKKATEKQAFSIGTPIEVSPEEEGFEDSWFLAKLIEYRGKDKCLVEYDNLKA-EDGKE 427

Query: 59  PLKEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFS 118
           PL+E V    +RP+P        ++ +  VN   NDGWW G+I   ++ +    Y V F 
Sbjct: 428 PLREEVNVSRIRPLPLESVMVSPFERHDKVNALYNDGWWVGVIRKVLAKSS---YLVLFK 484

Query: 119 STNETLPYNCSRIRVHHEFFDAEW 142
           +T E L ++ S++R+H E+ D +W
Sbjct: 485 NTQELLKFHHSQLRLHQEWIDGKW 508



 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 11/141 (7%)

Query: 11  KVGDEVEVIGKEEGFYTSYYEATVVSLLPFG-----RYEVQYKTLIVDEETKIPLKEAVL 65
           K G  VE+   E GF  S+Y   V+++         + +V+Y TL  D+E   PLKE V 
Sbjct: 40  KPGSAVEISSDEIGFRGSWYMGKVITIPSSSDKDSVKCQVEYTTLFFDKEGTKPLKEVVD 99

Query: 66  AKDLR-PVPPLVNTRGEYKLY--QAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNE 122
              LR P PP+     + K+   + V+ F NDGWW G +   +    GK ++V+F S+ E
Sbjct: 100 MSQLRPPAPPMSEIEKKKKIVVGEEVDAFYNDGWWEGDVTEVLD--DGK-FSVFFRSSKE 156

Query: 123 TLPYNCSRIRVHHEFFDAEWQ 143
            + +    +R H E+ D  W+
Sbjct: 157 QIRFRKDELRFHREWVDGAWK 177



 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 7/136 (5%)

Query: 9   VYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKD 68
           ++  G  VEV   EEGF   ++ A VV  +   ++ V+Y+ L  +++   PLKE      
Sbjct: 220 MFSSGTVVEVSSDEEGFQGCWFAAKVVEPVGEDKFLVEYRDL-REKDGIEPLKEETDFLH 278

Query: 69  LRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIV-GRISCTGGKGYNVYFSSTNETLPYN 127
           +RP PP  +   ++ +   +N F NDGWW G+++ G    T G    +YF  + E + + 
Sbjct: 279 IRPPPPR-DEDIDFAVGDKINAFYNDGWWVGVVIDGMKHGTVG----IYFRQSQEKMRFG 333

Query: 128 CSRIRVHHEFFDAEWQ 143
              +R+H ++ D  WQ
Sbjct: 334 RQGLRLHKDWVDGTWQ 349


>AT3G06520.1 | Symbols:  | agenet domain-containing protein |
           chr3:2020284-2021955 FORWARD LENGTH=466
          Length = 466

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 4/138 (2%)

Query: 9   VYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKD 68
           V+  G EVEV   E G+  S++ A +VS L   RY V+Y+TL  D+E ++ LKE     D
Sbjct: 332 VFNNGMEVEVRSDEPGYEASWFSAKIVSYLGENRYTVEYQTLKTDDEREL-LKEEARGSD 390

Query: 69  LRPVPPLVNTRG-EYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYN 127
           +RP PP +  +G  Y+LY+ V+ + N+GWW G +  +I+    + Y VYF +T+E+L + 
Sbjct: 391 IRPPPPPLIPKGYRYELYELVDAWYNEGWWSGRVY-KINNNKTR-YGVYFQTTDESLEFA 448

Query: 128 CSRIRVHHEFFDAEWQQI 145
            + +R    + + +W ++
Sbjct: 449 YNDLRPCQVWRNGKWSRV 466



 Score = 62.8 bits (151), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 2/139 (1%)

Query: 5   QRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAV 64
           +R   Y+ G  VEV  +E+ +  S+Y A ++ LL   +Y V++     D+   IPL++ V
Sbjct: 164 KRRDQYEKGALVEVRSEEKAYKGSWYCARILCLLGDDKYIVEHLKFSRDDGESIPLRDVV 223

Query: 65  LAKDLRPVPPL-VNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNET 123
            AKD+RPVPP  ++    Y+    V+ + N  WW    V ++   G   Y+V+  ST E 
Sbjct: 224 EAKDIRPVPPSELSPVVCYEPGVIVDAWFNKRWWTSR-VSKVLGGGSNKYSVFIISTGEE 282

Query: 124 LPYNCSRIRVHHEFFDAEW 142
                  +R H ++ + +W
Sbjct: 283 TTILNFNLRPHKDWINGQW 301


>AT1G26540.1 | Symbols:  | Agenet domain-containing protein |
           chr1:9167783-9170795 REVERSE LENGTH=695
          Length = 695

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 11/135 (8%)

Query: 16  VEVIGKEEGFYTSYYEATVVSLLPFG----RYEVQYKTLIVDEETKIPLKEAVLAKDLRP 71
           VEV  +EEGF  +++ A V+   P      +  V+Y TL+ D +   PL E +  + +RP
Sbjct: 14  VEVSSEEEGFEGAWFRA-VLEENPGNSSRRKLRVRYSTLL-DMDGSSPLIEHIEQRFIRP 71

Query: 72  VPPLVNTRGEYKLYQA--VNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCS 129
           VPP  N + +  L +   V+    DGWW G++V ++       Y VYF    + + +   
Sbjct: 72  VPPEENQQKDVVLEEGLLVDADHKDGWWTGVVVKKME---DDNYLVYFDLPPDIIQFERK 128

Query: 130 RIRVHHEFFDAEWQQ 144
           ++R H  +    W Q
Sbjct: 129 QLRTHLIWTGGTWIQ 143


>AT2G47230.1 | Symbols: DUF6, ATDUF6 | DOMAIN OF UNKNOWN FUNCTION
           724 6 | chr2:19387126-19390011 FORWARD LENGTH=701
          Length = 701

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 8/138 (5%)

Query: 13  GDEVEVIGKEEGFYTSYYEATVV-SLLPFGRYE--VQYKTLIVDEETKIPLKEAVLAKDL 69
           G EVEV   EEGF  +++   +  +    GR +  V+Y TL+ D+    PL E +  + +
Sbjct: 8   GSEVEVSSTEEGFADAWFRGILQENPTKSGRKKLRVRYLTLLNDDALS-PLIENIEPRFI 66

Query: 70  RPVPPLVNTRG-EYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNC 128
           RPVPP     G   +    V+    DGWW G+I+ ++    GK + VY+ S  + + +  
Sbjct: 67  RPVPPENEYNGIVLEEGTVVDADHKDGWWTGVIIKKLE--NGK-FWVYYDSPPDIIEFER 123

Query: 129 SRIRVHHEFFDAEWQQID 146
           +++R H  +   +W + D
Sbjct: 124 NQLRPHLRWSGWKWLRPD 141


>AT2G47230.2 | Symbols: DUF6 | DOMAIN OF UNKNOWN FUNCTION 724 6 |
           chr2:19387126-19390011 FORWARD LENGTH=709
          Length = 709

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 8/138 (5%)

Query: 13  GDEVEVIGKEEGFYTSYYEATVV-SLLPFGRYE--VQYKTLIVDEETKIPLKEAVLAKDL 69
           G EVEV   EEGF  +++   +  +    GR +  V+Y TL+ D+    PL E +  + +
Sbjct: 8   GSEVEVSSTEEGFADAWFRGILQENPTKSGRKKLRVRYLTLLNDDALS-PLIENIEPRFI 66

Query: 70  RPVPPLVNTRG-EYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNC 128
           RPVPP     G   +    V+    DGWW G+I+ ++    GK + VY+ S  + + +  
Sbjct: 67  RPVPPENEYNGIVLEEGTVVDADHKDGWWTGVIIKKLE--NGK-FWVYYDSPPDIIEFER 123

Query: 129 SRIRVHHEFFDAEWQQID 146
           +++R H  +   +W + D
Sbjct: 124 NQLRPHLRWSGWKWLRPD 141


>AT1G11420.1 | Symbols: ATDUF2, DUF2 | DOMAIN OF UNKNOWN FUNCTION
           724 2 | chr1:3844581-3846872 REVERSE LENGTH=604
          Length = 604

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 5   QRTVVYKVGDEVEVIGKEEGFYTSYYEATVV---SLLPFGRYEVQYKTLIVDEETKIPLK 61
           ++ +  +  D+VEV  +EE    SYY A +    +     + +V+Y T + +E    PL 
Sbjct: 2   EQMIFIRKDDKVEVFSEEEELKGSYYRAILEDNPTKSGHNKLKVRYLTQL-NEHRLAPLT 60

Query: 62  EAVLAKDLRPVPPL-VNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSST 120
           E V  + +RPVP   VN    +     V+ +  DGWW G++V  +     + + VYF   
Sbjct: 61  EFVDQRFIRPVPSEDVNDGVVFVEGLMVDAYLKDGWWTGVVVKTME---DEKFLVYFDCP 117

Query: 121 NETLPYNCSRIRVHHEFFDAEWQQID 146
            + + +   ++RVH ++   +W + D
Sbjct: 118 PDIIQFEKKKLRVHLDWTGFKWIRPD 143