Miyakogusa Predicted Gene

Lj0g3v0043909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0043909.1 Non Chatacterized Hit- tr|I3SCQ2|I3SCQ2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.32,0,HAD,NULL;
no description,Phosphoserine phosphatase, domain 2; no
description,HAD-like domain; HAD-li,CUFF.2039.1
         (293 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18640.2 | Symbols: PSP | 3-phosphoserine phosphatase | chr1:...   389   e-108

>AT1G18640.2 | Symbols: PSP | 3-phosphoserine phosphatase |
           chr1:6416524-6418245 REVERSE LENGTH=295
          Length = 295

 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/226 (80%), Positives = 209/226 (92%)

Query: 67  NTLASKETLEIWRNSDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTARAMGGSVPFE 126
           N + SKE L++WR+ +AVCFDVDSTVC+DEGIDELAEFCGAGKAVAEWTARAMGGSVPFE
Sbjct: 69  NIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFE 128

Query: 127 EALAARLSLFKPSLSQLQNFLQQKPPRLSPGIEELVQKLKANSIHVYLISGGFRQMINPV 186
           EALAARLSLFKPSLS+++ +L ++PPRLSPGIEELV+KL+AN+I VYLISGGFRQMINPV
Sbjct: 129 EALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGGFRQMINPV 188

Query: 187 ASILGIPQENIFANQLLFGSSGDFLGFDENEPTSRSGGKASAVQKIKKARGYKTLTMVGD 246
           ASILGIP+ENIFAN LLFG+SG+FLGFDENEPTSRSGGKA AVQ+I+K R YKT+ M+GD
Sbjct: 189 ASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRLYKTMAMIGD 248

Query: 247 GATDFEARGPGGANLFICYAGVQLREAVAAKADWLVFDFKDLISSL 292
           GATD EAR PGGA+LFICYAGVQLREAVAA ADWL+F F+ LI+SL
Sbjct: 249 GATDLEARKPGGADLFICYAGVQLREAVAANADWLIFKFESLINSL 294