Miyakogusa Predicted Gene
- Lj0g3v0043789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0043789.1 Non Chatacterized Hit- tr|A5ATC1|A5ATC1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,68.01,0,seg,NULL; ZF_RING_2,Zinc finger, RING-type;
coiled-coil,NULL; zf-RING_2,Zinc finger, RING-type; OS01,CUFF.2027.1
(368 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 344 6e-95
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 244 5e-65
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 189 2e-48
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 174 1e-43
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 155 4e-38
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 130 2e-30
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 100 3e-21
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 99 4e-21
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 97 1e-20
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 96 3e-20
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 96 4e-20
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 95 8e-20
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 94 1e-19
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 94 1e-19
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 94 2e-19
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 93 2e-19
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 93 3e-19
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 92 5e-19
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 92 6e-19
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 91 1e-18
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 91 2e-18
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 90 2e-18
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 89 4e-18
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 89 5e-18
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 89 5e-18
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 88 8e-18
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 85 7e-17
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 85 8e-17
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 85 9e-17
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 84 1e-16
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 2e-16
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 82 6e-16
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 82 6e-16
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 82 6e-16
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 81 1e-15
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 80 2e-15
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 79 6e-15
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 79 7e-15
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 78 1e-14
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 78 1e-14
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 77 2e-14
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 77 2e-14
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 75 6e-14
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 75 7e-14
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 75 1e-13
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 74 1e-13
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 74 1e-13
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 73 3e-13
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 73 3e-13
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 72 5e-13
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 72 5e-13
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 5e-13
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 6e-13
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 72 6e-13
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 71 1e-12
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 71 1e-12
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 3e-12
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 68 1e-11
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 2e-11
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 3e-11
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 67 3e-11
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 67 3e-11
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 66 3e-11
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 66 4e-11
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 65 6e-11
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 65 1e-10
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 1e-10
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 1e-10
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 2e-10
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 64 2e-10
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 64 2e-10
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 64 2e-10
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 63 2e-10
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 63 3e-10
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 63 4e-10
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 63 4e-10
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 62 6e-10
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 62 7e-10
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 1e-09
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 61 1e-09
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 1e-09
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 1e-09
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 60 2e-09
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 3e-09
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 3e-09
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 4e-09
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 4e-09
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 5e-09
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 59 6e-09
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 59 6e-09
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 6e-09
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 6e-09
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 6e-09
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 8e-09
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 58 8e-09
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 58 9e-09
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 58 9e-09
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 1e-08
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 58 1e-08
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 2e-08
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 2e-08
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 2e-08
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 57 3e-08
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 3e-08
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 56 3e-08
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 4e-08
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 4e-08
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 6e-08
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 55 7e-08
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 7e-08
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 7e-08
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 54 1e-07
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 54 1e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT5G37230.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 2e-07
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 3e-07
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 3e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 4e-07
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 4e-07
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 53 4e-07
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 5e-07
AT1G67856.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 6e-07
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 6e-07
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 52 7e-07
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 52 7e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 9e-07
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 9e-07
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 52 9e-07
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 52 9e-07
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 52 9e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 52 1e-06
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT5G43200.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 2e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT1G24580.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 3e-06
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 4e-06
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 49 5e-06
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 49 5e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 6e-06
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 8e-06
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 9e-06
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 344 bits (882), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 200/377 (53%), Positives = 239/377 (63%), Gaps = 36/377 (9%)
Query: 14 MAWIQHQIQQKDASSSSPNPGHFDK--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG 71
M+W++ I+QKD + + P P + D SG
Sbjct: 1 MSWVRFTIEQKDGNFAYPPPFYKDPILSPPSPPPPSSGNRISPAVLFVIVILAVLFFISG 60
Query: 72 LLHLLVRFLTK---KNPSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQ 128
LLHLLVRFL K SS+S+R EIS SDAL+RQLQQLFHL+D GLDQAFIDALPVF
Sbjct: 61 LLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFH 120
Query: 129 YKEITGL----------KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNST 178
YKEI G +EP DCAVCLCEFSEKD LRLLP+CSHAFH+NCIDTWL SNST
Sbjct: 121 YKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNST 180
Query: 179 CPLCRGTLLGLAAGFSVENPIFDYDDLRDDEGCYGENEFRNRKKSVEIQDI-VEKGIFPV 237
CPLCRGTL + GFS+ENP+FD+DD+R+DE EN +K++EIQ+I VEKG+ PV
Sbjct: 181 CPLCRGTL--FSPGFSMENPMFDFDDIREDEEGVTEN---GSQKTMEIQEIVVEKGVLPV 235
Query: 238 RLGKFRRLDV----EAVETI-GGETSSSNLDARRCYSMGSYQYVLGKSDLRITLNNDRKS 292
RLGKF+RLD + + + GGETSSSNLDARRC+SMGSYQY+LG S+L++ NDR
Sbjct: 236 RLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSELKVPFANDRL- 294
Query: 293 CDAXXXXXXXXXXXXXXXGDIEAKKIRRVGKGESYSVSKIWLWSEKGKFSVSSDAGMGMP 352
+ KKI V KGES+SVSKIWLW +K KF SSDA +P
Sbjct: 295 --PRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKF--SSDAQRRLP 350
Query: 353 -SSLNAE----LPWMRE 364
SSLN + LPWM E
Sbjct: 351 SSSLNVDDLPKLPWMEE 367
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 148/282 (52%), Positives = 176/282 (62%), Gaps = 37/282 (13%)
Query: 71 GLLHLLVRFLTKKNPSS------QSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDAL 124
+LHLLVR+ KK S+ +S+++ E S+SD +RQLQQLFHLHD GLDQA IDAL
Sbjct: 68 SILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDAL 127
Query: 125 PVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRG 184
PVF YKEI G KEP DCAVCLCEFSE D LRLLP CSHAFHI+CIDTWLLSNSTCPLCRG
Sbjct: 128 PVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRG 187
Query: 185 TLLGLAAGFSVENPIFDYDDLRDDEGCYGENEFRNRKKSVE--IQDIVEKGIFPVRLGKF 242
TL L F+Y D + R V+ ++ + K +F VRLGKF
Sbjct: 188 TLFSLGHQ-------FEYPDFNFGFFAGDDGGGGVRVSPVQKPAENEIGKRVFSVRLGKF 240
Query: 243 RRLDV----EAVETIGGETSSSNLDARRCYSMGSYQYVLGKSDLRITL--NNDRKSCDAX 296
R ++ E V GGETSSS+LD RRC+SMGSYQY++ +SDL + L NN+
Sbjct: 241 RSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPNNE------- 293
Query: 297 XXXXXXXXXXXXXXGDIEAKKIRRVGKGESYSVSKIWLWSEK 338
D+E KKI KGES+SVSKIW WS K
Sbjct: 294 ---------GLKNNKDVEGKKINMRSKGESFSVSKIWQWSNK 326
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 166/309 (53%), Gaps = 52/309 (16%)
Query: 71 GLLHLLVRFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYK 130
GLLH+LV+FL PS +S R N AL+ QLQQLF+LHD G+DQ+ ID LPVF YK
Sbjct: 58 GLLHILVKFLL--TPSRES-REDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYK 114
Query: 131 EITGLK-EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGL 189
I GLK P DC VCLCEF +D LRLLP CSHAFH+ CIDTWLLS+STCPLCR LL
Sbjct: 115 SIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLL-- 172
Query: 190 AAGFSVEN--------------------PIFD------YDDLRDDEGCYGENEFRNRKKS 223
+GFS + P+ + YD D E R+ +KS
Sbjct: 173 -SGFSSHHNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSES----TRIRSGRKS 227
Query: 224 VEI---QDIVEKGIFP--VRLGKFRRLDV------EAVETIGGETSSSNLDARRCYSMGS 272
+ D +++ + P V+LGKFR +D + +I G +S N+D RRC SMGS
Sbjct: 228 CDPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISG--NSKNVDGRRCLSMGS 285
Query: 273 YQYVLGKSDLRITLNNDRKSCDAXXXXXXXXXXXXXXXGDIEAKKIRR-VGKGESYSVSK 331
Y+Y++ + + + ++ K D K I + V + ES+S+SK
Sbjct: 286 YEYIMDQ-EATLKVHVSTKKLSGKDRVPSHRTVMSECGFDPTVKGIEKSVVERESFSLSK 344
Query: 332 IWLWSEKGK 340
IWL +K K
Sbjct: 345 IWLRGKKEK 353
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 163/314 (51%), Gaps = 57/314 (18%)
Query: 85 PSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYKEITGLKE-PLDCAV 143
PSS+ DR N AL+ QLQQLFHLHD G+DQ+FID LPVF YK I GLK P DCAV
Sbjct: 78 PSSR-DREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAV 136
Query: 144 CLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGT-----------------L 186
CLCEF +D LRLLP CSHAFH++CIDTWLLS+STCPLCR + +
Sbjct: 137 CLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLV 196
Query: 187 LGLAAGFSVENPIFDYDD-----LRDD-------EGCYGENEFRNRKKSV---------E 225
L A+ S D D DD G G N+ + + E
Sbjct: 197 LESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGE 256
Query: 226 IQDIVEKGI-FPVRLGKFRRLDV-EAVETIGGETSSSNLDARRCYSMGSYQYVLG-KSDL 282
+ V K + F V+LGKFR +D+ E + +SS+LD RRC+SMGSY+Y++ ++ L
Sbjct: 257 LGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTL 316
Query: 283 RITLNNDRKSCD---------AXXXXXXXXXXXXXXXGD-----IEAKKIRRVGKGESYS 328
++ ++ ++S A G +E + V + ES+S
Sbjct: 317 KVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVERESFS 376
Query: 329 VSKIWLWSEKGKFS 342
VSKIWL +K K S
Sbjct: 377 VSKIWLRGKKEKHS 390
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 130/225 (57%), Gaps = 20/225 (8%)
Query: 71 GLLHLLVRFLTKKN---PSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVF 127
G+L+L+ +FL K + P + + ++ + + QLQ LF LHD GLDQ IDALPVF
Sbjct: 135 GVLYLIFKFLRKSSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVF 192
Query: 128 QYKEIT-GLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 186
Y +T L++P DCAVCL EFS+ D LRLLPVCSHAFH++CIDTWLLSNSTCPLCR +L
Sbjct: 193 LYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
Query: 187 LGLAAGFSVENPIFDYDDLRDDEGCYGENEFRNRKKSVEIQDIVEKGIFPVRLGKFRRLD 246
S N +++ + G + + K S + K +F VRLG+F+ +
Sbjct: 253 -------STSNVCYNHSETLVAP-LSGHQQVDDGKAS------LAKRVFSVRLGRFKSTN 298
Query: 247 VEAVETIGGETSSSNLDARRCYSMGSYQYVLGKSDLRITLNNDRK 291
+ + RRCYSMG+ QY++ D + L++ +
Sbjct: 299 ESQSQRHDVKDEIGVRMPRRCYSMGTQQYLVCDQDFVVALSSSPR 343
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Query: 70 SGLLHLLVRFLTKKNPSSQSDRHRE--ISNSDALERQLQQLFHLHDFGLDQAFIDALPVF 127
+ L+HLLV+FL + P ++ D + +S AL+ + Q F+LHD +DQ+FIDALP+
Sbjct: 50 AALIHLLVKFLHR--PQTRLDDAYDGITESSTALQGRYQTRFNLHDAEIDQSFIDALPLL 107
Query: 128 QYKEITGLKEPL-DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
YK + GL+ L DCAVCL EF+ +D LRLLP CSHAFH+ CIDTWLL+NSTCPLCR
Sbjct: 108 HYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 13/120 (10%)
Query: 70 SGLLHLLVRFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQY 129
+GLL + +R + NP S + R +N + R GLD A +++ PVF Y
Sbjct: 60 TGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRG----------GLDNAVVESFPVFAY 109
Query: 130 KEITGLK---EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 186
+ K + L+CA+CL E + + +RLLP+C+H FHI+CIDTWL S++TCP+CR L
Sbjct: 110 SSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 35/173 (20%)
Query: 119 AFIDALPVFQYKEITGLKEPL---DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLS 175
+ +D+LP+F++ +T + DCAVCL +F +D LRLLP+C HAFH +CID WL+S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 176 NSTCPLCRGTLLGLAAGFSVENPIFDYDDLRDDEGCYGENEFRNRKKSVEIQDIVEKGIF 235
N TCPLCR L F+ E+ + + GEN FR +EI I +
Sbjct: 152 NQTCPLCRSPL------FASESDLMKSLAVVGSNNGGGENSFR-----LEIGSISRRRQT 200
Query: 236 PVRLGKFRRLDVEAVETIGGETSSSNLDARRCYSMGSYQYVLGKSDLRITLNN 288
P+ E+VE R YS+GS+ Y++ D I+ +N
Sbjct: 201 PI---------PESVEQ------------HRTYSIGSFDYIVDDVDSEISESN 232
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 101 LERQLQQLFHLHDF-GLDQAFIDALPVFQYKEITGLK---EPLDCAVCLCEFSEKDNLRL 156
+E Q++FH GL++ +++ P+F Y E+ GLK ++CA+CL EF +K+ LR
Sbjct: 79 VEAASQEVFHSRARRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRW 138
Query: 157 LPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGLAAGFSVENPIFDYD 203
+P CSH FH NCID WL S STCP CR L L G S PI D +
Sbjct: 139 MPPCSHTFHANCIDVWLSSQSTCPACRAN-LSLKPGESYPYPITDLE 184
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 54/69 (78%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
G+D++ I++LPVF++ ++G K+ L+CAVCL F + LRLLP C HAFH+ C+DTWL
Sbjct: 66 GIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLD 125
Query: 175 SNSTCPLCR 183
++STCPLCR
Sbjct: 126 AHSTCPLCR 134
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 57/76 (75%)
Query: 116 LDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLS 175
LD++ I ++ V++Y+++ G E DC+VCL EF E ++LRLLP C+HAFH+ CIDTWL S
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 193
Query: 176 NSTCPLCRGTLLGLAA 191
+S CPLCR ++ +A
Sbjct: 194 HSNCPLCRAFIVTSSA 209
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 91 RHREISNSDALERQLQ--------QLFHLHDFGLDQAFIDALPVFQYKEITGLKEPLDCA 142
RH + S+S+ L Q + GL+++ I ++ V++YK G + DC+
Sbjct: 84 RHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCS 143
Query: 143 VCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGL 189
VCL EF E ++LRLLP C+HAFH+ CIDTWL S+S CPLCR + G+
Sbjct: 144 VCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGV 190
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GLD+ I++LP F++ + GLK+ L+C+VCL +F + + LRLLP C HAFHI CID WL
Sbjct: 98 GLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLE 157
Query: 175 SNSTCPLCRG 184
++TCPLCR
Sbjct: 158 QHATCPLCRN 167
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 97 NSDALERQLQ---QLFH----LHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFS 149
N +E + Q Q+ H + GL Q+ I+++ + YK GL E DC VCL EF
Sbjct: 126 NDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFE 185
Query: 150 EKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGLAAGFSVENPIF 200
E ++LRLLP C+HAFHI+CIDTWL S++ CPLCR + A SV P +
Sbjct: 186 EDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRY 232
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 108 LFHLHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHIN 167
++H+ GL+ I ++ V QY + G+ E DC+VCL EF E++ LRLLP C HAFH+
Sbjct: 184 IWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLY 243
Query: 168 CIDTWLLSNSTCPLCRGTLL 187
CIDTWL S++ CPLCR ++
Sbjct: 244 CIDTWLRSHTNCPLCRAPIV 263
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 115 GLDQAFIDALPVFQYKEITGLK---EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
G+D+ I++ P F Y E+ K ++CA+CLCEF +++ LR +P CSH FH NCID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 172 WLLSNSTCPLCRGTLLGLAAGFSVENPIFDYD 203
WL S STCP+CR L L +G S +P D +
Sbjct: 151 WLSSRSTCPVCRAN-LSLKSGDSFPHPSMDVE 181
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GLD+ I++LP+F++ + G K+ LDC+VCL +F + LRLLP C HAFHI CID WL
Sbjct: 97 GLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLE 156
Query: 175 SNSTCPLCR 183
++TCPLCR
Sbjct: 157 QHATCPLCR 165
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Query: 72 LLHLLVRFLTK-----KNPSSQSDRHREISNSDA-LERQLQQLFHLHDFGLDQAFIDALP 125
+L L++ F+ + ++Q R ++DA E Q+ ++ L GLD I+ P
Sbjct: 57 VLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFP 116
Query: 126 VFQYKEITGL---KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLC 182
F Y E+ + K ++CAVCLCEF + + LRL+P C H FH +C+D WL +STCPLC
Sbjct: 117 TFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLC 176
Query: 183 RGTLL 187
R L+
Sbjct: 177 RADLV 181
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 105 LQQLFHLHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAF 164
++ + GL ++ I+++ V +K+ G+ + +C+VCL EF E ++LRLLP CSHAF
Sbjct: 99 FHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAF 158
Query: 165 HINCIDTWLLSNSTCPLCRGTLL 187
H+NCIDTWLLS+ CPLCR +L
Sbjct: 159 HLNCIDTWLLSHKNCPLCRAPVL 181
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GLD I +LPVF + + T K+P++CAVCL EF E + R+LP C H FH++CID W
Sbjct: 94 GLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 175 SNSTCPLCRGTLLGLA 190
S+STCPLCR + LA
Sbjct: 153 SHSTCPLCRSLVESLA 168
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 115 GLDQAFIDALPVFQYKEITGL---KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD + I+ P FQY + L KE L+C+VCL EF + + LRL+P C H FH CID
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 172 WLLSNSTCPLCRGTLL 187
WL S++TCPLCR L+
Sbjct: 175 WLRSHTTCPLCRADLI 190
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 115 GLDQAFIDALPVFQYKEITGLK---EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GL++ I++ P F Y E+ GLK ++CA+CL EF +++ LR +P CSH FH NCID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 172 WLLSNSTCPLCRGTL 186
WL S STCP+CR L
Sbjct: 154 WLSSWSTCPVCRANL 168
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 115 GLDQAFIDALPVFQYKEITGLK---EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GL + I++ P F Y ++ GLK ++CA+CL EF +++ LRL+P CSHAFH +CID
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 172 WLLSNSTCPLCRGTLLGLAAGFSVENPIFDYDDLRDDEGCYGENEFRNRKKSVEIQDI 229
WL S STCP+CR +L S +N ++ + D++ EN R+ +E D+
Sbjct: 159 WLSSRSTCPVCRASLPPKPG--SDQNSLYPFIRPHDNQDMDLEN-VTARRSVLESPDV 213
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 114 FGLDQAFIDALPVFQYKEITGLKEPL----------DCAVCLCEFSEKDNLRLLPVCSHA 163
+GLD + I LP+F Y +P DCAVCL EF E D +R LP+C HA
Sbjct: 119 YGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHA 178
Query: 164 FHINCIDTWLLSNSTCPLCRGTLLGLAAGFSVENPI 199
FH+ CID WL S+ CPLCR +LG A + +P
Sbjct: 179 FHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPF 214
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 114 FGLDQAFIDALPVFQYKEITGLKEPL----------DCAVCLCEFSEKDNLRLLPVCSHA 163
+GLD + I LP+F Y +P DCAVCL EF E D +R LP+C HA
Sbjct: 119 YGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHA 178
Query: 164 FHINCIDTWLLSNSTCPLCRGTLLGLAAGFSVENPI 199
FH+ CID WL S+ CPLCR +LG A + +P
Sbjct: 179 FHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPF 214
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 115 GLDQAFIDALPVFQYKEITGL---KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD + I+ P F Y + L KE L+C VCL EF + + LRL+P C H FH CID
Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148
Query: 172 WLLSNSTCPLCRGTLLGLAAGFSVENPI 199
WL S +TCPLCR L+ + G SV + I
Sbjct: 149 WLRSQTTCPLCRANLVPV-PGESVSSEI 175
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 12/105 (11%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GL+ + I +LP+F + +T L ++C+VCL EF + ++ R++P C H FH++CID W
Sbjct: 51 GLNPSIIKSLPIFTFSAVTALFA-MECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFH 109
Query: 175 SNSTCPLCRGTLLGLAAG---------FSVENPIFDYDDLRDDEG 210
S+S+CPLCR + A G S+ +P+ Y D EG
Sbjct: 110 SHSSCPLCRSLIEPFAGGVKSTMDEVAISISDPV--YGDTNHHEG 152
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 113 DFGLDQAFIDALPVFQY--KEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCID 170
D LDQA +D +P+F Y K +E +C+VCL EF E+D RLLP C H+FH++CID
Sbjct: 78 DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCID 137
Query: 171 TWLLSNSTCPLCRGTL 186
TW S STCPLCR +
Sbjct: 138 TWFRSRSTCPLCRAPV 153
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 111 LHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCID 170
LH+ GLD + ++ V +K T K+ L+CAVCL + + D R+LP C+H FH++CID
Sbjct: 91 LHNAGLDSKILQSIHVVVFK-CTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCID 149
Query: 171 TWLLSNSTCPLCRGTL 186
W S+STCPLCR T+
Sbjct: 150 MWFQSHSTCPLCRNTV 165
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPL---DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD+A I++ P F Y E+ + + +CAVC+CEF + + LRL+P C H FH +C+
Sbjct: 67 GLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSV 126
Query: 172 WLLSNSTCPLCRGTLLGLAAGFSVENP 198
WL +STCPLCR L S NP
Sbjct: 127 WLSDHSTCPLCRVDLCLQPGERSYLNP 153
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 8/94 (8%)
Query: 110 HLHDFGLDQAFIDALPVFQYKE---ITG----LKEPLDCAVCLCEFSEKDNLRLLPVCSH 162
H + GLD++ I A+PVF++K+ + G K +C+VCL EF E + LR++P C H
Sbjct: 96 HEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 163 AFHINCIDTWLLSNSTCPLCRGTLLGLAAGFSVE 196
FHI+CID WL N+ CPLCR T + A F+++
Sbjct: 156 VFHIDCIDIWLQGNANCPLCR-TSVSCEASFTLD 188
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 14/87 (16%)
Query: 111 LHDFGLDQAFIDALPVFQYKE--------------ITGLKEPLDCAVCLCEFSEKDNLRL 156
L GLD++ I A+P+F++K+ K +C+VCL EF +++ LR+
Sbjct: 94 LRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRI 153
Query: 157 LPVCSHAFHINCIDTWLLSNSTCPLCR 183
+P CSH FHI+CID WL +N+ CPLCR
Sbjct: 154 IPNCSHLFHIDCIDVWLQNNANCPLCR 180
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPL---DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD I +LP F + G+K + +CAVCL EKDN R+LP C H FH++C+DT
Sbjct: 75 GLDSLVIASLPTF----VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDT 130
Query: 172 WLLSNSTCPLCR 183
WL + STCP+CR
Sbjct: 131 WLTTQSTCPVCR 142
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 115 GLDQAFIDALPVFQYKEITGLK---EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD + ++ P F Y ++ K L+CA+CL EF + + LRLLP C H FH +CID
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158
Query: 172 WLLSNSTCPLCRGTLL-GLAAGFSVE 196
WL ++ TCP+CR L +A G SVE
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVE 184
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GLD I + PVF Y T +CA+CL EFS++D +RL+ VC H FH NCID W
Sbjct: 77 GLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFE 136
Query: 175 SNSTCPLCRGTL 186
+ TCP+CR L
Sbjct: 137 LHKTCPVCRCEL 148
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 111 LHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCID 170
L + GL + +LP+ +++ K+ L+C++CL E + D RLLP C+H+FH+ CID
Sbjct: 98 LSNTGLTSFELSSLPIVFFRQ-DSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECID 156
Query: 171 TWLLSNSTCPLCRGTLLG 188
W S+STCP+CR T+LG
Sbjct: 157 MWFQSHSTCPICRNTVLG 174
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GLD + +LPV++Y + + DC +CL +F E + ++++P C H FH++C+DTWL
Sbjct: 115 GLDSQAVRSLPVYRYTKAAKQRNE-DCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173
Query: 175 SNSTCPLCRGTLLGLAAGFSVENPIFDYDDLRDDEGCYGENEFRNRKKS 223
S TCPLCR L ++ P D D + + C G + R S
Sbjct: 174 SYVTCPLCRSNQLFSDKDLGMQEPP-DQDSAEEHDTCDGVDTCVRRCSS 221
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 115 GLDQAFIDALPVFQYKEITGLK---EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD I+ P F Y E+ K L+CA+CL EF + + LRLLP C H FH +CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 172 WLLSNSTCPLCRGTL 186
WL + TCP+CR L
Sbjct: 155 WLQGHVTCPVCRTNL 169
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 116 LDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLS 175
LD ++ +P+F Y T +C+VCL EF E D R+LP C H FH++CIDTW S
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 176 NSTCPLCRGTLL---------GLAAGFSVENPIFDYD 203
S+CPLCR + +AA F PI D +
Sbjct: 148 RSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTE 184
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEP----LDCAVCLCEFSEKDNLRLLPVCSHAFHINCID 170
GLD I + P F Y E G+ EP L+C VCL EF + + LRL+P C H FH +C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGI-EPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVD 114
Query: 171 TWLLSNSTCPLCRGTLL 187
WL +STCP+CR ++
Sbjct: 115 IWLSHSSTCPICRAKVV 131
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 73 LHLLVRFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYKEI 132
LHL RF+ + R RE L + F + GL+ I +LP F
Sbjct: 49 LHLYARFVLR--------RRREAFR--GLPVIFRHPFEMPKRGLNPTVIASLPTFTVGAT 98
Query: 133 TGLK-EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
G+ +CAVCL E+D R LP C H FH++C+DTWL + STCP+CR
Sbjct: 99 DGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCR 150
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 81 TKKNPSSQSDRHREISNSDALERQLQQ-LFHLHD--FGLDQAFIDALPVFQYKE-ITGLK 136
T +S+S R I + ++ ER Q F L GLD I + F+ K+ G K
Sbjct: 90 TTNEAASESGRSDIILDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFK 149
Query: 137 -EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
DC++CL EF+E ++LRLLP C+H FH+ CID WL S+S CPLCR ++
Sbjct: 150 INGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII 201
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GL + + PV +Y +CA+CL EF++ + +R+LP C+H+FH++CIDTWL+
Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLV 138
Query: 175 SNSTCPLCRGTLL 187
S+S+CP CR +L+
Sbjct: 139 SHSSCPNCRHSLI 151
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEP--------LDCAVCLCEFSEKDNLRLLPVCSHAFHI 166
GLDQA I++ P F + + T C++CLCE+ E + LR++P C H FH+
Sbjct: 104 GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHL 163
Query: 167 NCIDTWLLSNSTCPLCRGTLLGLAAGFSVENPI 199
C+D WL N +CP+CR + L + P+
Sbjct: 164 CCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPL 196
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 113 DFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTW 172
+ GL + + LP+ +KE + + C+VCL ++ D L+ +PVC H FH++CID W
Sbjct: 73 ELGLSKELREMLPIVVFKESFTVMD-SQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLW 131
Query: 173 LLSNSTCPLCRGTLLGLAAGFSVENPI 199
L S++TCPLCR L+ + S ++P+
Sbjct: 132 LTSHTTCPLCRLALIPSRSRQSQDDPV 158
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPL-DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL 173
GL + + +LP Y + E L +CA+CL EF+ D LR+LP C H FH++CIDTWL
Sbjct: 77 GLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWL 136
Query: 174 LSNSTCPLCRGTLL 187
S+S+CP CR L+
Sbjct: 137 GSHSSCPSCRQILV 150
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEP---LDCAVCLCEFSEKDNL-RLLPVCSHAFHINCID 170
GL+ I + P+F + + L+E L+CA+CL EF E+ L RLL C H FH CID
Sbjct: 85 GLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECID 144
Query: 171 TWLLSNSTCPLCRGTL 186
WL SN TCP+CR L
Sbjct: 145 QWLESNKTCPVCRRNL 160
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEP---LDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GL+ I++ P F Y + L+E L+CA+CL EF LRLL C H FH CID
Sbjct: 81 GLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDL 140
Query: 172 WLLSNSTCPLCRGTL 186
W S+ TCP+CR L
Sbjct: 141 WFESHRTCPVCRRDL 155
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
G+ + + +PV Y +K +C +CL +F E + +R+LP C+H FH+ CIDTWLL
Sbjct: 88 GIKKRALKVIPVDSYSPELKMKA-TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLL 146
Query: 175 SNSTCPLCRGTLL 187
S+S+CP CR +LL
Sbjct: 147 SHSSCPTCRQSLL 159
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPL-DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL 173
GL + + +LP + + E +CA+CL EFS D LR+LP C H FH+ CIDTWL
Sbjct: 84 GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWL 143
Query: 174 LSNSTCPLCRGTLL 187
S+S+CP CR L+
Sbjct: 144 GSHSSCPSCRQILV 157
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 11/84 (13%)
Query: 115 GLDQAFIDALPVFQY-KEIT----------GLKEPLDCAVCLCEFSEKDNLRLLPVCSHA 163
GLD + I++ P F + K+IT G C++CLCE+ E++ LR++P C H
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHY 158
Query: 164 FHINCIDTWLLSNSTCPLCRGTLL 187
FH+ C+D WL N +CP+CR + L
Sbjct: 159 FHVYCLDAWLKLNGSCPVCRNSPL 182
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 113 DFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTW 172
+ GL + + LPV YKE +K+ C+VCL ++ ++ L+ +P C H FH+ CID W
Sbjct: 84 ELGLSKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 142
Query: 173 LLSNSTCPLCRGTLL 187
L S++TCPLCR +L+
Sbjct: 143 LTSHTTCPLCRLSLI 157
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GLD+ I + P Y E G CA+CL ++ K LR LP C+H FH+ CIDTWL
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 180
Query: 175 SNSTCPLCRGTLL 187
N TCP+CR + L
Sbjct: 181 LNPTCPVCRTSPL 193
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 140 DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGL 189
+CA+C+ EFSE + +R+LP+CSHAFH+ CID WL S S+CP CR L+ +
Sbjct: 112 ECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPV 161
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
G+ + ++P+ + K L+C VCL E ++ D R+LP C H FH+ CID+WL
Sbjct: 63 GIKPYVLRSIPIVDFNT-KDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQ 121
Query: 175 SNSTCPLCR 183
SNSTCP+CR
Sbjct: 122 SNSTCPICR 130
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 94 EISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDN 153
++SN+ L +L GL + + +PV Y + +C +CL +F + +
Sbjct: 69 QVSNASNANANLGRLAAAT--GLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEK 126
Query: 154 LRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
+R+LP C+H FH+ CIDTWLLS S+CP CR +LL
Sbjct: 127 VRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 113 DFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTW 172
+ GL + + LP+ YKE + + C+VCL ++ ++ L+ +P C H FH+ CID W
Sbjct: 70 ELGLSKDIREMLPIVIYKESFTVND-TQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 128
Query: 173 LLSNSTCPLCRGTLL 187
L S++TCPLCR +L+
Sbjct: 129 LTSHTTCPLCRLSLI 143
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 114 FGLDQAFIDALPVFQYKEITGLKEPLD--CAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD+ I++ P + L P + C++CLC++ ++ +R +P C+H FH +C+D
Sbjct: 65 LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDE 124
Query: 172 WLLSNSTCPLCRGT 185
WL +++TCPLCR +
Sbjct: 125 WLRTSATCPLCRNS 138
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 107 QLFHLHD----FGLDQAFIDALPVFQYKEITGLKEPLD--CAVCLCEFSEKDNLRLLPVC 160
Q +LH GLD I++ P E L + D CA+CL E+ K+ LR +P C
Sbjct: 290 QAHYLHSSVIVMGLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQC 349
Query: 161 SHAFHINCIDTWLLSNSTCPLCRGT 185
H FH +CID WL N TCP+CR +
Sbjct: 350 QHCFHADCIDEWLKLNGTCPVCRNS 374
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 115 GLDQAFIDALPVFQYKEI-TGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL 173
GL F+ LP F++ E T + DC VC F + R LP C H FH C+DTWL
Sbjct: 83 GLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWL 142
Query: 174 LSNSTCPLCRG 184
L STCP+CR
Sbjct: 143 LKASTCPICRA 153
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 140 DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 186
+CA+CL +F++ + +R+LP+C H+FH+ CID WL+S S+CP CR L
Sbjct: 101 ECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRIL 147
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 113 DFGLDQAFIDALPVFQYK-EITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
+ GLD I++ P + Y + G + C++CL EF + D +RL+ C+H+FH CID
Sbjct: 128 NLGLDSKIIESFPEYPYSVKDHGTDQ---CSICLTEFMDDDTIRLISTCNHSFHTICIDL 184
Query: 172 WLLSNSTCPLCRGTLLGLAAGFSVENPI 199
W + TCP+CR L + S+E P+
Sbjct: 185 WFEGHKTCPVCRRE-LDVEDRTSLEKPL 211
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 113 DFGLDQAFIDALPVFQYKEITGLKEPLD-CAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
D GLD + I ++P+F Y+E ++ + C +CL + D R L C H FH+ CID
Sbjct: 109 DKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDM 168
Query: 172 WLLSNSTCPLCRGTLLGLAA 191
WL S+STCPLCR +L +
Sbjct: 169 WLSSHSTCPLCRSPVLAAVS 188
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 115 GLDQAFIDALPVFQYK---EITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
G+ + + PV Y + GL E +C +CL +F + LRLLP C+H FH+ CID
Sbjct: 108 GIKKKALRMFPVVSYSPEMNLPGLDE--ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 172 WLLSNSTCPLCRGTLL 187
WL + TCP CR L+
Sbjct: 166 WLQQHLTCPKCRNCLV 181
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 115 GLDQAFIDALPVFQYK---EITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
G+ + + LPV Y + G+ E +C +CL +F + LR+LP C+H FH+ CID
Sbjct: 103 GIKKKALKMLPVVNYSPEINLPGVGE--ECVICLSDFVAGEQLRVLPKCNHGFHLRCIDK 160
Query: 172 WLLSNSTCPLCRGTLL 187
WL + TCP CR L+
Sbjct: 161 WLTQHMTCPKCRHCLV 176
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 110 HLHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCI 169
H LD + LP F + + K CA+CL ++ ++LRLLP C HAFH+NCI
Sbjct: 201 HTRTIRLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCI 259
Query: 170 DTWLLS-NSTCPLCR 183
D+WL ++CP+C+
Sbjct: 260 DSWLTKWGTSCPVCK 274
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 140 DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
+CA+CL EF ++ ++LLP C H FH+ CID WL S+S+CP CR L+
Sbjct: 130 ECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLI 177
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 115 GLDQAFIDALPVFQYKE---ITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
G+ + + PV Y + G+ E +C +CL +F + LRLLP C+H FH+ CID
Sbjct: 108 GIKKKALRMFPVVSYSREMNLPGIGE--ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 172 WLLSNSTCPLCRGTLL 187
WL + TCP CR L+
Sbjct: 166 WLQHHLTCPKCRHCLV 181
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 115 GLDQAFIDALPVFQYK---EITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
G+++ + PV Y + GL E +C +CL +F + +R+LP C H FH+ CID
Sbjct: 109 GINKKALRMFPVVSYSPEMNLPGLGE--ECVICLSDFVSGEQIRMLPKCHHGFHVRCIDK 166
Query: 172 WLLSNSTCPLCRGTLL 187
WL + TCP CR L+
Sbjct: 167 WLQQHLTCPKCRHCLV 182
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 120 FIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL--LSNS 177
+D LP+ Y + + ++P C +CL E+ E D++R LP C H FH C+D WL + +
Sbjct: 470 VVDLLPIKLYTK-SQSEDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHSR 527
Query: 178 TCPLCRGTL 186
CPLCRG +
Sbjct: 528 VCPLCRGDI 536
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 122 DALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPL 181
D L V + E G ++ L C VCL EF K+ L +P+C H FH++CI WL S++TCPL
Sbjct: 87 DKLHVVLFNEELGTRDSL-CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPL 145
Query: 182 CRGTLLGLAAGFSVEN 197
CR ++ + SV++
Sbjct: 146 CRSSVSISSTKTSVDD 161
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 110 HLHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCI 169
H LD + LP F + + K CA+CL ++ ++LRLLP C HAFH+NCI
Sbjct: 201 HTRTIRLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCI 259
Query: 170 DTWLLS-NSTCPLCR 183
D+WL ++CP+C+
Sbjct: 260 DSWLTKWGTSCPVCK 274
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 115 GLDQAFIDALPVFQYKEITGL--KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTW 172
GLDQ+ I+ + E L + C +CL E++ K+ +R +P C H FH+ CID W
Sbjct: 110 GLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVW 169
Query: 173 LLSNSTCPLCRGT 185
L + +CPLCR +
Sbjct: 170 LKIHGSCPLCRNS 182
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
G++ + + ++PV + K+ ++C VCL +F ++D R+LP C+H FH + DTWL
Sbjct: 54 GINPSVLLSIPVVSFNA-NAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTWLH 112
Query: 175 SNSTCPLCRGTL 186
S+ TCP CR +
Sbjct: 113 SDYTCPNCRKNV 124
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 120 FIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLS-NST 178
+D LP+ Y + + ++P C +CL E+ E D++R LP C H FH C+D WL +
Sbjct: 470 VVDLLPIKLYTK-SQSEDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHRV 527
Query: 179 CPLCRGTL 186
CPLCRG +
Sbjct: 528 CPLCRGDI 535
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 115 GLDQAFIDALPVFQYKEITGL--KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTW 172
GLDQ+ I++ + E L + C +CL E++ K+ +R +P C H FH+ CID W
Sbjct: 225 GLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEW 284
Query: 173 LLSNSTCPLCRGT 185
L +S+CP+CR +
Sbjct: 285 LKIHSSCPVCRNS 297
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 100 ALERQLQQLFHLHDF-----GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNL 154
AL+ + +L+DF GL ++ I +P+F + K C++CL ++ E +
Sbjct: 127 ALDTSYMESSNLYDFNHEKKGLSKSSIQNIPMFYNRSEHQTKS--SCSICLQDWEEGEVG 184
Query: 155 RLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
R L C H FH+NCID WLL TCP+CR
Sbjct: 185 RKLARCGHTFHMNCIDEWLLRQETCPICR 213
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GL + LP F+Y E + DC VC+ F + R LP C H FH C+D WL+
Sbjct: 89 GLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLI 148
Query: 175 SNSTCPLCRGTLLGLAAG 192
STCP+CR + G
Sbjct: 149 KVSTCPICRDRVYRFEEG 166
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 115 GLDQAFIDALPVFQYKE---ITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD++ I++ + E + G + + C +CL E++ K+ +R +P C H FH CID
Sbjct: 291 GLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDV 350
Query: 172 WLLSNSTCPLCRGT 185
WL + +CPLCR +
Sbjct: 351 WLKIHGSCPLCRNS 364
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 114 FGLDQAFIDALPVFQYKEI----TGLKEPLD---CAVCLCEFSEKDNLRLLPVCSHAFHI 166
GL + I P Y+E + KE C++CL ++ + D +R+LP C+H FH
Sbjct: 95 LGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHD 154
Query: 167 NCIDTWLLSNSTCPLCRGTLLGLAAGFSVEN 197
NC+D WL + TCP+CR + L A V +
Sbjct: 155 NCVDPWLRLHPTCPVCRTSPLPSPAMTPVAD 185
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGLAAG 192
C +CL + +E + +R + CSH FH++CID WL+ STCPLCR + + G
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPPVPPG 121
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 71 GLLHLLVRFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYK 130
G + L V + + ++ RH + + A Q Q + GLDQ+ I+ ++
Sbjct: 245 GAVILFVTCIAIRIHNTPRRRHWAVPAAAATVMQ-QPREVMATRGLDQSTIEK---YKTM 300
Query: 131 EITGLKEP-----LDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGT 185
E+ + P + C +CL E+ K+ +R +P C H FH CID WL + +CPLCR +
Sbjct: 301 ELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 360
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 70 SGLLHLLVRFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDF------GLDQAFIDA 123
SGL + +V L ++ +SQ D E+ D E ++L L D GL I +
Sbjct: 214 SGLANRVVEDLEDESHTSQ-DAWDEM---DPDELSYEELLALGDIVGTESRGLSADTIAS 269
Query: 124 LPVFQYKE---ITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
LP +YKE G E C +C ++ + ++L LLP C H++H CI+ WL N CP
Sbjct: 270 LPSKRYKEGDNQNGTNES--CVICRLDYEDDEDLILLP-CKHSYHSECINNWLKINKVCP 326
Query: 181 LCRGTLLGLAAGFS 194
+C + +G S
Sbjct: 327 VCSAEVSTSTSGQS 340
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 82 KKNPSSQSDRHREISNSDALERQLQQLFHLHDF-GLDQAFIDALPVFQYKEITGLKEPLD 140
+ P+ S ++ D+ +L +F GL +D +P + ITG K LD
Sbjct: 128 RIGPAMLSAVQSQMGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIK---ITG-KNNLD 183
Query: 141 -------CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
C+VCL +F + +R LP C H FH+ CID WL + +CP+CR
Sbjct: 184 ASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 115 GLDQAFIDALPVFQYKEITGL---KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GLD++ I++ + E L + C +CL E++ K+ +R LP C H FH CID
Sbjct: 298 GLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDA 357
Query: 172 WLLSNSTCPLCRG 184
WL +S+CP+CR
Sbjct: 358 WLKLHSSCPVCRS 370
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 96 SNSDALERQLQQLFHLHDFGLDQAFI-DALPVFQYKEITGLK-EPLDCAVCLCEFSEKDN 153
S A+E Q Q + D + + D+L IT E + C+VCL +F +
Sbjct: 129 SQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGET 188
Query: 154 LRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
+R LP C H FH+ CID WL +++CPLCR
Sbjct: 189 VRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 32/55 (58%)
Query: 138 PLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGLAAG 192
P CAVCL E E + +R L +C H FH +CIDTWL S CPLCR + L
Sbjct: 59 PPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPPLPPA 113
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 140 DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
+C+VCL F++ D LR L C HAFH+ CI+TWL + CP+CR
Sbjct: 141 ECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICR 184
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 121 IDALPVFQYKEI------TGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
I +LP ++YK I + +C +CL ++ EK+ +R LP CSH FH+ C+D WL
Sbjct: 263 ISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLR 321
Query: 175 SNSTCPLCRGTL 186
S CPLC+ L
Sbjct: 322 IISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 121 IDALPVFQYKEI------TGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
I +LP ++YK I + +C +CL ++ EK+ +R LP CSH FH+ C+D WL
Sbjct: 263 ISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLR 321
Query: 175 SNSTCPLCRGTL 186
S CPLC+ L
Sbjct: 322 IISCCPLCKQDL 333
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 137 EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
E +C +CLCE+ + LR LP C+H FH CID WL NS CPLC+ +L
Sbjct: 334 EDAECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCKFNIL 383
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 131 EITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
E T L+E +C +CL + + LR LP C H FH +C+D WL N+TCPLC+ +L
Sbjct: 343 EHTLLQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNIL 398
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 29/95 (30%)
Query: 115 GLDQAFIDALPVFQYKE--------------------------ITGLKEPLDCAVCLCEF 148
G I+ALPV+++K I+G E C +CL +
Sbjct: 305 GATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISG--EDASCCICLTRY 362
Query: 149 SEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
+ + +R LP CSH FH++C+D WL N+TCPLC+
Sbjct: 363 GDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCK 396
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 136 KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL-SNSTCPLCRGTLLG 188
+E + C +CL EF +D + LP C+H FHINCI+ WLL + TCPLCR +L
Sbjct: 57 EEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVLA 110
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 131 EITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
E T L+E +C +CL + + LR LP C H FH +C+D WL N+TCPLC+ +L
Sbjct: 272 EHTLLQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNIL 327
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
C+VCL +F + +R LP C H FH+ CID WLL + +CP+CR
Sbjct: 196 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCR 238
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 137 EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
E + C+VCL +F + +R LP C H FH+ CID WL +++CPLCR
Sbjct: 196 EIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GL ++ +P +E+ + +CAVCL + + RL+P C+H FH C DTWL
Sbjct: 78 GLSVLELEKIPKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLS 137
Query: 175 SNSTCPLCRGTL 186
+++ CP+CR L
Sbjct: 138 NHTVCPVCRAEL 149
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 135 LKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
L E +C++CLC + + LR LP C H FH C+D WL N+TCPLC+ +L
Sbjct: 317 LSEDAECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCKFNIL 368
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 122 DALPVFQYKEITGLKE--PLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL-LSNST 178
+ LPV +++E+T E P +CAVCL EF + +R L C H FH +C+D W+ T
Sbjct: 73 EILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKT 132
Query: 179 CPLCRGTLL 187
CPLCR +
Sbjct: 133 CPLCRTPFV 141
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 122 DALPVFQYKEIT--GLKEPLDC-AVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL--SN 176
+ LPV ++ E+T G DC AVCL EF D +R L C H FH +C+D W++ +
Sbjct: 83 EILPVIRFSELTRPGFGSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQ 142
Query: 177 STCPLCRGTLL 187
TCPLCR +
Sbjct: 143 MTCPLCRTPFI 153
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 115 GLDQAFIDALPV-FQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL 173
GLD A I +LPV +E +E +C +CL F E + +++LP CSH +H C+D WL
Sbjct: 80 GLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWL 139
Query: 174 LSNSTCPLCRGTL 186
+ S+CPLCR ++
Sbjct: 140 KTESSCPLCRVSI 152
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGLAAGFSVENPI 199
C +CL +E + +R + CSH FH++CID WL S CPLCR + + G NP+
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPVPPG----NPL 124
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 92 HREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYKEITGLKEPLDC-AVCLCEFSE 150
H E S SD L L + + +PV ++ ++ L +P DC VCL +F
Sbjct: 45 HNETSRSDPTRLALSTSATLAN--------ELIPVVRFSDL--LTDPEDCCTVCLSDFVS 94
Query: 151 KDNLRLLPVCSHAFHINCIDTWLL--SNSTCPLCRGTLL 187
D +R LP C H FH C+D W++ + TCP+CR L
Sbjct: 95 DDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFL 133
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 111 LHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCID 170
+ + G D ALP E +C +CL + ++ LR LP C H FH C+D
Sbjct: 305 MTECGTDSPVEHALP----------HEDAECCICLSAYEDETELRELP-CGHHFHCGCVD 353
Query: 171 TWLLSNSTCPLCRGTLL 187
WL N+TCPLC+ +L
Sbjct: 354 KWLYINATCPLCKYNIL 370
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
++ALP + + EPL C+VCL +F + + +P C H FH+ CI WL +S+CP
Sbjct: 245 VEALPTVK------IMEPLQCSVCLDDFEKGTEAKEMP-CKHKFHVRCIVPWLELHSSCP 297
Query: 181 LCRGTL 186
+CR L
Sbjct: 298 VCRFEL 303
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 128 QYKEITGL--KEPLDCAVCLCEFSEK--DNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
Q E+T L +E C++CL +FSE DN+ LLP C H FH NCI WL +CPLCR
Sbjct: 122 QTMELTDLGDEEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCR 181
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 140 DCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLG 188
+CA+CL EF + +++++L C H FH+ CI WL + S+CP CR ++
Sbjct: 106 ECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFS 154
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 92 HREISNSDALERQLQQLF-HLHDFGLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSE 150
H ++ SD + + ++ L GL + LP + ++ C +CL +
Sbjct: 126 HWQLRISDVSYEEREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKT 185
Query: 151 KDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
+ R LP C H FH+ C+D WL+ + +CP+CR
Sbjct: 186 GEITRSLPKCDHTFHLVCVDKWLIRHGSCPICR 218
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 139 LDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNST-CPLCR 183
CA+CL ++ D LR+LP CSH FH+ C+D+WL+S T CP+C+
Sbjct: 230 FSCAICLEDYIVGDKLRVLP-CSHKFHVACVDSWLISWRTFCPVCK 274
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Query: 121 IDALPVFQYKEI------------TGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINC 168
I +LP +++K I T +P +C +CL ++ +K+ +R LP CSH FH C
Sbjct: 266 ISSLPSWKFKRIDDSASDSDSDSATVTDDP-ECCICLAKYKDKEEVRKLP-CSHKFHSKC 323
Query: 169 IDTWLLSNSTCPLCRGTL 186
+D WL S CPLC+ L
Sbjct: 324 VDQWLRIISCCPLCKQDL 341
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Query: 121 IDALPVFQYKEI------------TGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINC 168
I +LP +++K I T +P +C +CL ++ +K+ +R LP CSH FH C
Sbjct: 266 ISSLPSWKFKRIDDSASDSDSDSATVTDDP-ECCICLAKYKDKEEVRKLP-CSHKFHSKC 323
Query: 169 IDTWLLSNSTCPLCRGTL 186
+D WL S CPLC+ L
Sbjct: 324 VDQWLRIISCCPLCKQDL 341
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 118 QAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNS 177
+A I LP F+ K + + +C +CL EF +R LP C+H FH+ CID WL N
Sbjct: 214 EALIQELPKFRLKAVP--DDCGECLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNV 270
Query: 178 TCPLCRGTLL 187
CP CR ++
Sbjct: 271 KCPRCRCSVF 280
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 133 TGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLG 188
T L LDC +CL E S + LP CSH FH +CI TWL N +CP+CR G
Sbjct: 166 TCLVPALDCPICLTELSSGVSRMKLP-CSHVFHRDCIMTWLKKNPSCPICRTKAHG 220
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
I +P+ Q + + C +CL E++ ++ ++ LP C H FH CID WL +++CP
Sbjct: 244 IIFIPIQQQAKSVPWRNDTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCP 303
Query: 181 LCRGTLLGLAAGFSVEN 197
+CR + L + N
Sbjct: 304 VCRNSPSSLPNKAATTN 320
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEP----LDCAVCLCEFSEKDNLRLLPVCSHAFHINCID 170
GL + I A P F YK E ++C VCL + +++LP C H F CI
Sbjct: 61 GLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIG 120
Query: 171 TWLLSNSTCPLCR 183
WL S++TCP+CR
Sbjct: 121 KWLESHATCPVCR 133
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 118 QAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNS 177
+A IDA+P+ + G +C +CL E+ ++ ++ +P C H FH CI+ WL +
Sbjct: 95 KASIDAMPIVEIDGCEG-----ECVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLGFHG 148
Query: 178 TCPLCR 183
+CP+CR
Sbjct: 149 SCPVCR 154
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 115 GLDQAFIDALPVFQYKEI-TGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL 173
G+ + + A+P + CA+CL +++ D LRLLP C H FH C+D+WL
Sbjct: 205 GMSRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCC-HKFHAACVDSWL 263
Query: 174 LSNST-CPLCR 183
S T CP+C+
Sbjct: 264 TSWRTFCPVCK 274
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
C +CL +++ + LR LP CSH FH C+D WL N++CPLC+
Sbjct: 363 CCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCK 404
>AT5G37230.1 | Symbols: | RING/U-box superfamily protein |
chr5:14735154-14735780 FORWARD LENGTH=208
Length = 208
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 128 QYKEITGL--KEPLDCAVCLCEFSEK--DNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
Q E+T L +E C++C+ +FSE DN+ LLP C H FH +CI WL +CPLCR
Sbjct: 138 QTMELTNLGDEEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCR 197
>AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr2:10397588-10398184 FORWARD
LENGTH=198
Length = 198
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 74 HLLVRFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYKEIT 133
H++ ++ K +Q R S + Q Q LF + L Q +P T
Sbjct: 86 HVMSEQISSKIVEAQRQR------SQSFYSQQQPLFMIVSVKLTQKVYSVVPCISSPSAT 139
Query: 134 GL---KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLS-NSTCPLCRGTL 186
+ +E CA+CL S +N +P C H +H C+ W++ N++CPLCR +
Sbjct: 140 DVDQEEESETCAICLENMSRSENYCQMPYCKHCYHEGCVTKWVIGHNNSCPLCRKPV 196
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 113 DFGLDQAFIDALPVFQYKEITGLK-EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
D L+ DA P Y L +C +CL EF + D LR+L C H FH+ CI
Sbjct: 73 DPDLEATHPDAPPTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQK 132
Query: 172 WL-LSNSTCPLCRGTLLG 188
WL S+S+CP CR +
Sbjct: 133 WLSSSHSSCPTCRTNIFS 150
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 128 QYKEITGL--KEPLDCAVCLCEFSEK--DNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
Q E T L +E C++CL +FSE DN+ LLP C H FH +CI WL +CPLCR
Sbjct: 138 QTMEFTDLGDEEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCR 197
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 137 EPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 186
E +CA+CL + + R+ PVC H +H CID WL ++ TCP CR L
Sbjct: 126 ESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDL 175
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 122 DALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL--SNSTC 179
+ LPV ++ +I E CAVCL +F D +R L C H FH C+D W++ + TC
Sbjct: 71 EMLPVVRFSDINR-PESECCAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTC 129
Query: 180 PLCRGTLL 187
PLCR +
Sbjct: 130 PLCRTQFI 137
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRG 184
C +CL +F D +R+L C H FH++CID+W TCP+CR
Sbjct: 93 CVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICRA 136
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
IDALP + + E CAVC+ EF + +++ +P C H FH +C+ WL +++CP
Sbjct: 196 IDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMP-CKHVFHQDCLLPWLELHNSCP 254
Query: 181 LCRGTL 186
+CR L
Sbjct: 255 VCRFEL 260
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 118 QAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNS 177
+ +D LP + + E L C++CL +F + + +P C H FHI CI WL +S
Sbjct: 224 KEVVDNLPTVK------ISESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHS 276
Query: 178 TCPLCRGTL 186
+CP+CR L
Sbjct: 277 SCPVCRYEL 285
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 118 QAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNS 177
+ +D LP + + E L C++CL +F + + +P C H FHI CI WL +S
Sbjct: 224 KEVVDNLPTVK------ISESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHS 276
Query: 178 TCPLCRGTL 186
+CP+CR L
Sbjct: 277 SCPVCRYEL 285
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL----------LGLA 190
CA+CL E+S+ D +P C H FH C++ WL ++TCP+CR + +G+
Sbjct: 109 CAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLGRHATCPMCRYEMPVEEVEEEKKIGIW 167
Query: 191 AGFSV 195
GFS+
Sbjct: 168 IGFSI 172
>AT1G67856.1 | Symbols: | RING/U-box superfamily protein |
chr1:25442486-25442887 FORWARD LENGTH=133
Length = 133
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 136 KEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSN-STCPLCRGTL 186
+E +DC VCLC F E++ + L C H FH C+D W +N +TCPLCR L
Sbjct: 82 REAMDCCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPLCRSIL 133
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 122 DALPVFQYKEITG-LKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNS-TC 179
D LP ++++I+ + P C +C EF D +R L C H +H CID W+ + TC
Sbjct: 51 DMLPATKFEDISSRVNPPESCRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWIQDDKMTC 110
Query: 180 PLCRGTLL 187
PLCR ++
Sbjct: 111 PLCRTPIV 118
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 134 GLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
G ++ L C+VCL + + + +R LP C H FH CID WL TCP+C+
Sbjct: 204 GTEDELTCSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 76 LVRFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDFGLDQAFIDALPVFQYKEITGL 135
L RFL S+ +S S +L +L +PV ++ ++
Sbjct: 40 LPRFLDHNETSAPDLTRHALSTSASLANEL------------------IPVVRFSDLP-- 79
Query: 136 KEPLDC-AVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL--SNSTCPLCRGTLL 187
+P DC VCL +F D +R LP C H FH C+D W++ + CP+CR L
Sbjct: 80 TDPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCRHRFL 134
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 135 LKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
L E DC +CL + + L LP C+H FH CI WL N+TCPLC+ +L
Sbjct: 286 LPEDADCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 115 GLDQAFIDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL 174
GL Q I+ L + E DC++CL F++ D L LP C+H+FH +C++ WL
Sbjct: 177 GLTQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLP-CTHSFHSSCLNPWLR 235
Query: 175 SNSTCPLCRGTL 186
+ CP CR +
Sbjct: 236 ACGDCPCCRRAI 247
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
IDALP + + +C VC EF + +P C+H +H +CI WL+ +++CP
Sbjct: 170 IDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCP 228
Query: 181 LCRGTLLGLAAGFSVEN 197
+CR L + S +N
Sbjct: 229 VCRQELPSASGPSSSQN 245
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
IDALP + + +C VC EF + +P C+H +H +CI WL+ +++CP
Sbjct: 170 IDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCP 228
Query: 181 LCRGTLLGLAAGFSVEN 197
+CR L + S +N
Sbjct: 229 VCRQELPSASGPSSSQN 245
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
IDALP + + +C VC EF + +P C+H +H +CI WL+ +++CP
Sbjct: 170 IDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCP 228
Query: 181 LCRGTLLGLAAGFSVEN 197
+CR L + S +N
Sbjct: 229 VCRQELPSASGPSSSQN 245
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 131 EITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
E T L E DC +CL + + L LP C+H FH CI WL +TCPLC+ +L
Sbjct: 297 ERTLLAEDADCCICLSSYEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 78 RFLTKKNPSSQSDRHREISNSDALERQLQQLFHLHDF------GLDQAFIDALPVFQYKE 131
R+ +PSS S + N+D ++L L D GL Q I L +Y
Sbjct: 154 RYTHTHSPSSISHNPTDDENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGT 213
Query: 132 ITG-----------LKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
T + + C++CL E+++ D + LP C H +H +CI WL N C
Sbjct: 214 KTKSWYCLHMKKKFVADDSQCSICLMEYAKGDKITTLP-CKHIYHKDCISQWLKQNKVCC 272
Query: 181 LCRGTL 186
+C+ +
Sbjct: 273 ICKAEV 278
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 126 VFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGT 185
+ ++K+I + C +CL EF + + + +C H FH CID WL N TCP CR +
Sbjct: 95 ILEFKDIKEGSNKIFCPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLTCPNCRCS 154
Query: 186 LLG 188
L
Sbjct: 155 LTA 157
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 130 KEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
+ ++G ++ C+VCL +F K+ + L P C H FH CI WL + CP+CR +L
Sbjct: 161 QNLSGEEDDKRCSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVIL 217
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
IDALP + + C VC EF K + +P C H +H +CI WL+ +++CP
Sbjct: 166 IDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHNSCP 224
Query: 181 LCRGTL 186
+CR L
Sbjct: 225 VCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
IDALP + + C VC EF K + +P C H +H +CI WL+ +++CP
Sbjct: 166 IDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHNSCP 224
Query: 181 LCRGTL 186
+CR L
Sbjct: 225 VCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 121 IDALPVFQYKEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCP 180
IDALP + + C VC EF K + +P C H +H +CI WL+ +++CP
Sbjct: 166 IDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHNSCP 224
Query: 181 LCRGTL 186
+CR L
Sbjct: 225 VCRKEL 230
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 135 LKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 186
++E L C+VCL +F +L+P C+H FH +C+ WL +S+CP+CR L
Sbjct: 217 IEETLQCSVCLDDFEIGTEAKLMP-CTHKFHSDCLLPWLELHSSCPVCRYQL 267
>AT5G43200.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr5:17346141-17346764 REVERSE
LENGTH=207
Length = 207
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLL-SNSTCPLCR 183
CA+CL E S D+ LP C+H FH C+ WL+ N++CPLCR
Sbjct: 156 CAICLEELSTSDDYCELPNCTHCFHEPCLTQWLIRGNNSCPLCR 199
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 130 KEITGLKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLL 187
+ ++G ++ C+VCL +F K+ + L P C H FH CI WL + CP+CR +L
Sbjct: 133 QNLSGEEDDKRCSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVIL 189
>AT1G24580.1 | Symbols: | RING/U-box superfamily protein |
chr1:8710232-8710573 FORWARD LENGTH=113
Length = 113
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 139 LDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSN-STCPLCRGTL 186
++C VCLC F E++ + L C H FH C+D W +N +TCPLCR L
Sbjct: 65 VECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSIL 113
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 135 LKEPLDCAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCR 183
++E DCA+CL F + + L LP C+H FH C+ WL +N CP CR
Sbjct: 144 VREQQDCAICLDRFKKGETLVHLP-CAHKFHSICLLPWLDTNVYCPYCR 191
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 128 QYKEITGLKEPLD---CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRG 184
Q K + K P D C VC E++E +++ L C H FH CI WL + CP+C+
Sbjct: 621 QRKYKSNTKSPQDAEPCCVCQEEYTEGEDMGTL-ECGHEFHSQCIKEWLKQKNLCPICKT 679
Query: 185 TLLGLA 190
T L A
Sbjct: 680 TGLNTA 685
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL---------LSNSTCPLCRGTLLGLAA 191
CAVCL + ++D +R L C+H FH +CID WL ++ TCPLCR LL
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPLLPSFT 142
Query: 192 GFS 194
+S
Sbjct: 143 DYS 145
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 115 GLDQAFIDALPVFQYK--EITGLKEPLD-CAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GL Q I+ LP +YK I K + C +C ++ + LP C H +H CI
Sbjct: 168 GLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHSECISK 226
Query: 172 WLLSNSTCPLCRGTLLG 188
WL N CP+C + G
Sbjct: 227 WLSINKVCPVCNSEVFG 243
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 115 GLDQAFIDALPVFQYK--EITGLKEPLD-CAVCLCEFSEKDNLRLLPVCSHAFHINCIDT 171
GL Q I+ LP +YK I K + C +C ++ + LP C H +H CI
Sbjct: 168 GLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHSECISK 226
Query: 172 WLLSNSTCPLCRGTLLG 188
WL N CP+C + G
Sbjct: 227 WLSINKVCPVCNSEVFG 243
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWL-LSNSTCPLCR 183
C +CL + + D LR+LP C H FH+ C+D WL S CP+C+
Sbjct: 234 CCICLENYEKGDKLRILP-CHHKFHVACVDLWLGQRKSFCPVCK 276
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 85 PSSQSDRHREISNSDALERQLQQLFHLHDFGLDQA---FIDALPVFQYKEITGLKEPLDC 141
P + H + + +LE+ ++QL G A I++LP + + C
Sbjct: 165 PPRHVNSHDYFTGASSLEQLIEQLTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQC 224
Query: 142 AVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 186
VC+ EF + LP C H +H +CI WL N++CP+CR L
Sbjct: 225 TVCMEEFIVGGDATELP-CKHIYHKDCIVPWLRLNNSCPICRRDL 268
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 141 CAVCLCEFSEKDNLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTLLGLAAGF 193
C +CL E+ + +R L C H FH+ CID+WL CP CR ++ ++ G
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRSVDLMSLGL 132