Miyakogusa Predicted Gene

Lj0g3v0041729.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0041729.1 Non Chatacterized Hit- tr|I1MTX5|I1MTX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49707
PE,85.46,0,DCUN1,Potentiating neddylation domain; SUBFAMILY NOT
NAMED,NULL; RP42 RELATED,Defective-in-cullin ne,CUFF.1987.1
         (227 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15860.2 | Symbols:  | Domain of unknown function (DUF298) | ...   270   5e-73
AT1G15860.1 | Symbols:  | Domain of unknown function (DUF298) | ...   270   5e-73
AT1G15860.3 | Symbols:  | Domain of unknown function (DUF298) | ...   263   8e-71
AT3G12760.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Defective-...    98   4e-21

>AT1G15860.2 | Symbols:  | Domain of unknown function (DUF298) |
           chr1:5455055-5456741 FORWARD LENGTH=227
          Length = 227

 Score =  270 bits (691), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 121/204 (59%), Positives = 160/204 (78%)

Query: 21  RAEPKKSTSKQFDRIDHLFESYANKSLGLIDPDGIEALCKDVKVDHTDVRMLILAWKMKA 80
           R+   K+++K+ DRIDHLF  YANKS  LIDP+GIE LC +++V HTD+R+L+LAWKMKA
Sbjct: 23  RSASSKASNKEMDRIDHLFNQYANKSSSLIDPEGIEELCSNLEVSHTDIRILMLAWKMKA 82

Query: 81  EKQGYFSKDEWRRGLKSLGADTLAKFKKAINGLKKELMVPESFEDFYSYAFQYCLTEDKQ 140
           EKQGYF+ +EWRRGLK+L ADT+ K KKA+  L+KE+  P +F DFY+YAF YCLTE+KQ
Sbjct: 83  EKQGYFTHEEWRRGLKALRADTINKLKKALPELEKEVRRPSNFADFYAYAFCYCLTEEKQ 142

Query: 141 RSIDIETICELLNVVLRPEFPNQVDLLIEYLKNQNDYRALSMDHWRNFYRFFKEVSFRDL 200
           +SIDIETIC+LL +V+   F  QVD  +EYLK QNDY+ ++MD W   YRF  E+SF D+
Sbjct: 143 KSIDIETICQLLEIVMGSTFRAQVDYFVEYLKIQNDYKVINMDQWMGLYRFCNEISFPDM 202

Query: 201 QSYDSSQAWPVILDNFVDWLKERE 224
             Y+   AWP+ILDNFV+W++E++
Sbjct: 203 GDYNPELAWPLILDNFVEWIQEKQ 226


>AT1G15860.1 | Symbols:  | Domain of unknown function (DUF298) |
           chr1:5455055-5456741 FORWARD LENGTH=227
          Length = 227

 Score =  270 bits (691), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 121/204 (59%), Positives = 160/204 (78%)

Query: 21  RAEPKKSTSKQFDRIDHLFESYANKSLGLIDPDGIEALCKDVKVDHTDVRMLILAWKMKA 80
           R+   K+++K+ DRIDHLF  YANKS  LIDP+GIE LC +++V HTD+R+L+LAWKMKA
Sbjct: 23  RSASSKASNKEMDRIDHLFNQYANKSSSLIDPEGIEELCSNLEVSHTDIRILMLAWKMKA 82

Query: 81  EKQGYFSKDEWRRGLKSLGADTLAKFKKAINGLKKELMVPESFEDFYSYAFQYCLTEDKQ 140
           EKQGYF+ +EWRRGLK+L ADT+ K KKA+  L+KE+  P +F DFY+YAF YCLTE+KQ
Sbjct: 83  EKQGYFTHEEWRRGLKALRADTINKLKKALPELEKEVRRPSNFADFYAYAFCYCLTEEKQ 142

Query: 141 RSIDIETICELLNVVLRPEFPNQVDLLIEYLKNQNDYRALSMDHWRNFYRFFKEVSFRDL 200
           +SIDIETIC+LL +V+   F  QVD  +EYLK QNDY+ ++MD W   YRF  E+SF D+
Sbjct: 143 KSIDIETICQLLEIVMGSTFRAQVDYFVEYLKIQNDYKVINMDQWMGLYRFCNEISFPDM 202

Query: 201 QSYDSSQAWPVILDNFVDWLKERE 224
             Y+   AWP+ILDNFV+W++E++
Sbjct: 203 GDYNPELAWPLILDNFVEWIQEKQ 226


>AT1G15860.3 | Symbols:  | Domain of unknown function (DUF298) |
           chr1:5455055-5456741 FORWARD LENGTH=236
          Length = 236

 Score =  263 bits (671), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 121/213 (56%), Positives = 160/213 (75%), Gaps = 9/213 (4%)

Query: 21  RAEPKKSTSKQFDRIDHLFESYANKSLGLIDPDGIEALCKDVKVDHTDVRMLILAWKMKA 80
           R+   K+++K+ DRIDHLF  YANKS  LIDP+GIE LC +++V HTD+R+L+LAWKMKA
Sbjct: 23  RSASSKASNKEMDRIDHLFNQYANKSSSLIDPEGIEELCSNLEVSHTDIRILMLAWKMKA 82

Query: 81  EKQGYFSKDEWRRGLKSLGADTLAKFKKAINGLKKELMVPESFEDFYSYAFQYCLTEDKQ 140
           EKQGYF+ +EWRRGLK+L ADT+ K KKA+  L+KE+  P +F DFY+YAF YCLTE+KQ
Sbjct: 83  EKQGYFTHEEWRRGLKALRADTINKLKKALPELEKEVRRPSNFADFYAYAFCYCLTEEKQ 142

Query: 141 RSIDIETICELLNVVLRPEFPNQVDLLIEYLKN---------QNDYRALSMDHWRNFYRF 191
           +SIDIETIC+LL +V+   F  QVD  +EYLK          QNDY+ ++MD W   YRF
Sbjct: 143 KSIDIETICQLLEIVMGSTFRAQVDYFVEYLKVWITQKSHIIQNDYKVINMDQWMGLYRF 202

Query: 192 FKEVSFRDLQSYDSSQAWPVILDNFVDWLKERE 224
             E+SF D+  Y+   AWP+ILDNFV+W++E++
Sbjct: 203 CNEISFPDMGDYNPELAWPLILDNFVEWIQEKQ 235


>AT3G12760.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           Defective-in-cullin neddylation protein
           (InterPro:IPR014764), Protein of unknown function DUF298
           (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
           BEST Arabidopsis thaliana protein match is: Domain of
           unknown function (DUF298) (TAIR:AT1G15860.2); Has 857
           Blast hits to 855 proteins in 202 species: Archae - 0;
           Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139;
           Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
           | chr3:4054963-4056826 FORWARD LENGTH=250
          Length = 250

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 110/198 (55%), Gaps = 3/198 (1%)

Query: 26  KSTSKQFDRIDHLFESYANKSLGLIDPDGIEALCKDVKVDHTDVRMLILAWKMKAEKQGY 85
           +S + +  R++ L+  Y +    +I  +GI  LC D++V+  D+  L+L+W M A     
Sbjct: 51  RSNAAEVRRLEELYNRYKDPYSDMILAEGISVLCNDLEVEPQDIVTLVLSWHMNAATACE 110

Query: 86  FSKDEWRRGLKSLGADTLAKFKKAINGLKKELMVPESFEDFYSYAFQYCLTEDKQRSIDI 145
           FS+ E+  GL++LG D++ K ++ +  ++ EL   + F + Y++AF +   E  Q+S+ +
Sbjct: 111 FSRQEFISGLQALGVDSIGKLQEKLPFMRSELKDEQKFHEIYNFAFGWA-KEKGQKSLAL 169

Query: 146 ETICELLNVVLRPEFPNQVDLLIEYLKNQNDYRALSMDHWRNFYRFFKEVSFRDLQSYDS 205
           +T   +  ++        V    ++L+++++ +A+S D W     F + V    L +YD+
Sbjct: 170 DTAIGMWQLLFAEREWPLVTHWCDFLQDRHN-KAISKDTWAQLLEFSRMVD-PVLSNYDA 227

Query: 206 SQAWPVILDNFVDWLKER 223
             AWP ++D FV++L ++
Sbjct: 228 EGAWPYLIDEFVEYLYDK 245