Miyakogusa Predicted Gene

Lj0g3v0041269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0041269.1 tr|G7J986|G7J986_MEDTR Chromo domain-containing
protein LHP1 OS=Medicago truncatula GN=MTR_3g118260
,67.27,2e-16,Chromo domain-like,Chromo domain-like; seg,NULL;
Chromatin organization modifier domain,Chromo domai,CUFF.1925.1
         (429 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17690.1 | Symbols: TFL2, LHP1 | like heterochromatin protein...   182   3e-46

>AT5G17690.1 | Symbols: TFL2, LHP1 | like heterochromatin protein
           (LHP1) | chr5:5827504-5829537 REVERSE LENGTH=445
          Length = 445

 Score =  182 bits (463), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/361 (36%), Positives = 182/361 (50%), Gaps = 46/361 (12%)

Query: 86  KGFYEVEAIRRKRIRRGQPQYLIKWRDWSEGSNTWEPLENLASVPDVVAAFEASLRSAX- 144
           +GFYE+EAIRRKR+R+G+ QYLIKWR W E +NTWEPLENL S+ DV+ AFE SL+    
Sbjct: 105 EGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKP 164

Query: 145 -XXXXXXHAVHHIQPKKRLERSATPYSLRQFPANTPDNHHTQSAPLNDISIPDIPAFPQT 203
                  +A  H Q KK+   ++T +      A    +  T     +   IPD      +
Sbjct: 165 GRKRKRKYAGPHSQMKKKQRLTSTSHD-----ATEKSDSSTSLNNSSLPDIPDPLDLSGS 219

Query: 204 VLFADEVENNGDASSLGNSNHAHGNR-SADAPEAVVERNEENDYDPKLSELRATTTN--- 259
            L   +VE    A +   SN    N  S      V   + E +YDP L+ELR    N   
Sbjct: 220 SLLNRDVE----AKNAYVSNQVEANSGSVGMARQVRLIDNEKEYDPTLNELRGPVNNSNG 275

Query: 260 ---------GYEGENLATQFQETQHSVGTRHVDGQLNGDCTEPGQSGRCRGAKRRKSGSV 310
                    G EG+N+                +G L     E  ++ R  GAKRRKSGSV
Sbjct: 276 AGCSQGGGIGSEGDNV--------------RPNGLLKVYPKELDKNSRFIGAKRRKSGSV 321

Query: 311 KRFNRDSYAGDE---PVNTQRPVDVSAVTTEQVQTGAADNAGPNGHKRTNHARPA----C 363
           KRF +D    +    P +     D++ + +   +     N  P   +  N ++       
Sbjct: 322 KRFKQDGSTSNNHTAPTDQNLTPDLTTLDSFG-RIARMGNEYPGVMENCNLSQKTKIEEL 380

Query: 364 TIVKIIKPVRYSAAVASSMQDASVTFVALRSDGTEVLVDNTYLKAYYPILLINYYEQHLR 423
            I KI+KP+ ++A+V+ ++Q+  VTF+ALRSDG E LVDN +LKA+ P LLI +YEQHL+
Sbjct: 381 DITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLK 440

Query: 424 Y 424
           Y
Sbjct: 441 Y 441