Miyakogusa Predicted Gene

Lj0g3v0041149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0041149.1 Non Chatacterized Hit- tr|I1MX37|I1MX37_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.5,0.000000000006,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,Protein of unknown function DUF1077, TMEM85;
DUF1077,Prot,CUFF.1901.1
         (61 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10780.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    56   6e-09
AT5G10780.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Uncharacte...    55   9e-09

>AT5G10780.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 14 growth stages; CONTAINS
           InterPro DOMAIN/s: Uncharacterised conserved protein
           UCP017207, transmembrane protein 85
           (InterPro:IPR016687), Protein of unknown function
           DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395
           proteins in 185 species: Archae - 0; Bacteria - 0;
           Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0;
           Other Eukaryotes - 83 (source: NCBI BLink). |
           chr5:3408422-3409784 FORWARD LENGTH=187
          Length = 187

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/40 (82%), Positives = 35/40 (87%)

Query: 8   QKAWEVAQPPLKNLLMRGFRMWMVGSTVHLFSIGITFSAL 47
           QKAWEVAQ P KNL+M GF MWM G+TVHLFSIGITFSAL
Sbjct: 62  QKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSAL 101


>AT5G10780.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           Uncharacterised conserved protein UCP017207,
           transmembrane protein 85 (InterPro:IPR016687), Protein
           of unknown function DUF1077 (InterPro:IPR009445); Has
           30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr5:3408422-3409759
           FORWARD LENGTH=180
          Length = 180

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/40 (82%), Positives = 35/40 (87%)

Query: 8   QKAWEVAQPPLKNLLMRGFRMWMVGSTVHLFSIGITFSAL 47
           QKAWEVAQ P KNL+M GF MWM G+TVHLFSIGITFSAL
Sbjct: 62  QKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSAL 101