Miyakogusa Predicted Gene
- Lj0g3v0040529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0040529.1 Non Chatacterized Hit- tr|I1GLM9|I1GLM9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.37,4e-19,Tubby C-terminal domain-like,Tubby C-terminal-like
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAME,CUFF.1881.1
(180 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G01750.2 | Symbols: | Protein of unknown function (DUF567) |... 149 1e-36
AT3G11740.1 | Symbols: | Protein of unknown function (DUF567) |... 139 1e-33
AT2G14560.1 | Symbols: LURP1 | Protein of unknown function (DUF5... 123 5e-29
AT1G33840.1 | Symbols: | Protein of unknown function (DUF567) |... 122 1e-28
AT5G01750.1 | Symbols: | Protein of unknown function (DUF567) |... 119 1e-27
AT2G14560.2 | Symbols: LURP1 | Protein of unknown function (DUF5... 103 9e-23
AT3G16900.1 | Symbols: | Protein of unknown function (DUF567) |... 97 6e-21
AT3G56180.1 | Symbols: | Protein of unknown function (DUF567) |... 87 6e-18
AT3G10986.1 | Symbols: | Protein of unknown function (DUF567) |... 80 6e-16
AT3G15810.1 | Symbols: | Protein of unknown function (DUF567) |... 65 2e-11
AT1G80120.1 | Symbols: | Protein of unknown function (DUF567) |... 65 2e-11
AT2G38640.1 | Symbols: | Protein of unknown function (DUF567) |... 58 4e-09
AT5G20640.1 | Symbols: | Protein of unknown function (DUF567) |... 50 8e-07
AT2G05910.1 | Symbols: | Protein of unknown function (DUF567) |... 50 1e-06
>AT5G01750.2 | Symbols: | Protein of unknown function (DUF567) |
chr5:290034-291109 FORWARD LENGTH=217
Length = 217
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 117/179 (65%), Gaps = 9/179 (5%)
Query: 8 ASHPVDL-IITKERALRD-NFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILH 65
A +P+D+ I+ K +L D NF +TD+N +++F VK P+ + + R L D G P++
Sbjct: 34 APYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGL---HDKRVLLDGSGTPVVT 90
Query: 66 LRRALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANNT-TKVCDFKVKA 124
LR +++ D W+ F G ST+ +DL++T KRSS+ QL+T L+VFL +N K CDF+VK
Sbjct: 91 LREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKG 150
Query: 125 NLSARSWVVYIGESDTVAAKIKKK--FGSVF-SREKFMVTVSPNIDYAFIVGLIVTLDD 180
+ RS VVY GESD + A++ +K SVF ++ F VTV PN+DYAFI L+V LDD
Sbjct: 151 SWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDD 209
>AT3G11740.1 | Symbols: | Protein of unknown function (DUF567) |
chr3:3712427-3713389 FORWARD LENGTH=194
Length = 194
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 115/180 (63%), Gaps = 10/180 (5%)
Query: 8 ASHPVDL-IITKERALRD-NFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILH 65
A +P++L I+ K L D NF VTD+N +++F VK PL +I + R L DA+ PIL
Sbjct: 10 APYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSI---SDKRILLDAYDTPILT 66
Query: 66 LRRALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQ-LRTTLNVFLANN-TTKVCDFKVK 123
LR ++ D W + GKST+ DL++T KRSS+ Q ++ L++FLA+N K+CDF VK
Sbjct: 67 LRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVK 126
Query: 124 ANLSARSWVVYIGESDTVAAKIKKKFGS---VFSREKFMVTVSPNIDYAFIVGLIVTLDD 180
+ RS VVY G+SD + A++ KK + + + F VTV PN+D+AFIV LIV LDD
Sbjct: 127 GSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDD 186
>AT2G14560.1 | Symbols: LURP1 | Protein of unknown function (DUF567)
| chr2:6214150-6215170 FORWARD LENGTH=207
Length = 207
Score = 123 bits (309), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Query: 3 CCPRTASHPVDLIITKE--RALRDNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHG 60
C P +PV L I ++ + NF +T + ++F VK PL ++ R L D G
Sbjct: 13 CSP----NPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSL---HGKRILLDCSG 65
Query: 61 NPILHLRRALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANNT-TKVCD 119
+L LR ++ D W+ F G STE L++T KRSS+ QL L VFLANN K+CD
Sbjct: 66 AKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLANNVEEKICD 125
Query: 120 FKVKANLSARSWVVYIGESDTVAAKIKKKF---GSVFSREKFMVTVSPNIDYAFIVGLIV 176
FKVK S VVY G+SDT+ A + K G F ++ F VTV N+DYAFI LIV
Sbjct: 126 FKVKGAWLDDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIV 185
Query: 177 TL 178
L
Sbjct: 186 IL 187
>AT1G33840.1 | Symbols: | Protein of unknown function (DUF567) |
chr1:12283862-12285306 REVERSE LENGTH=230
Length = 230
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 107/181 (59%), Gaps = 10/181 (5%)
Query: 5 PRTAS-HPVDLIITKE--RALRDNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGN 61
P+ S HPVDL I ++ + NF +T+ +++F VK P ++ E R L D G
Sbjct: 30 PKYCSLHPVDLAIVRKVLKITDGNFVITNAEGNLLFKVKDPFFSL---HEKRILMDGFGT 86
Query: 62 PILHLRRALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANN-TTKVCDF 120
+L L+ ++ D W F G STE DL++T KRS++ Q+ T L+VFLA+N K CD+
Sbjct: 87 KVLTLKGKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQITTKLDVFLADNIEQKKCDY 146
Query: 121 KVKANLSARSWVVYIGESDTVAAKI--KKKFGSV-FSREKFMVTVSPNIDYAFIVGLIVT 177
+++ S VY G+SD + A++ KK SV F ++ F +TV+PN+DYAFI LIV
Sbjct: 147 RLEGVWLETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFIASLIVI 206
Query: 178 L 178
L
Sbjct: 207 L 207
>AT5G01750.1 | Symbols: | Protein of unknown function (DUF567) |
chr5:290034-290685 FORWARD LENGTH=174
Length = 174
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 92/141 (65%), Gaps = 6/141 (4%)
Query: 8 ASHPVDL-IITKERALRD-NFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILH 65
A +P+D+ I+ K +L D NF +TD+N +++F VK P+ + + R L D G P++
Sbjct: 34 APYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGL---HDKRVLLDGSGTPVVT 90
Query: 66 LRRALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANNT-TKVCDFKVKA 124
LR +++ D W+ F G ST+ +DL++T KRSS+ QL+T L+VFL +N K CDF+VK
Sbjct: 91 LREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKG 150
Query: 125 NLSARSWVVYIGESDTVAAKI 145
+ RS VVY GESD + A++
Sbjct: 151 SWLERSCVVYAGESDAIVAQV 171
>AT2G14560.2 | Symbols: LURP1 | Protein of unknown function (DUF567)
| chr2:6214150-6214773 FORWARD LENGTH=179
Length = 179
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 3 CCPRTASHPVDLIITKE--RALRDNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHG 60
C P +PV L I ++ + NF +T + ++F VK PL ++ R L D G
Sbjct: 13 CSP----NPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSL---HGKRILLDCSG 65
Query: 61 NPILHLRRALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANNT-TKVCD 119
+L LR ++ D W+ F G STE L++T KRSS+ QL L VFLANN K+CD
Sbjct: 66 AKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLANNVEEKICD 125
Query: 120 FKVKANLSARSWVVYIGESDTVAAKIKKKFGSVFSREKFMVTVSPNIDY 168
FKVK S VVY G+SDT+ A + K +F E ++ V+ I Y
Sbjct: 126 FKVKGAWLDDSCVVYAGDSDTIIAHVNKLSFLIFVLEDSILHVNVYIIY 174
>AT3G16900.1 | Symbols: | Protein of unknown function (DUF567) |
chr3:5772106-5772849 FORWARD LENGTH=185
Length = 185
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 20/172 (11%)
Query: 10 HPVDLIITKERALRDNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILHLRRA 69
P+DL IT + TV D + VF VK+PL + R L D + +PI+ ++
Sbjct: 24 QPLDLTITGD-------TVKDATGNKVFKVKTPLFGL---HNKRILVDPNDSPIVTMKMK 73
Query: 70 LLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANNTTK--VCDFKVKANLS 127
+ + D W+ + G + D IFT KRSS QL+T + VFL +N T+ CDF +K
Sbjct: 74 VTSKHDRWQVYRGSDLD--DKIFTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIKGRFM 131
Query: 128 ARSWVVYIGESDTVAAKIKKKFGSVFSREKFMVTVSPNIDYAFIVGLIVTLD 179
R+ +Y+ +S + A++ + E+ + T+ PN+DYAFIV LI D
Sbjct: 132 KRACTIYVADSTKIIAQVYE------GHERLVATIYPNVDYAFIVTLIFIFD 177
>AT3G56180.1 | Symbols: | Protein of unknown function (DUF567) |
chr3:20844765-20845548 FORWARD LENGTH=204
Length = 204
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 1 MLCCPRTASHPVDLIITK--ERALRDNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDA 58
C P +P+DL++ + + +D + V D + +++ + R + D
Sbjct: 22 QFCNP----YPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGF---NRKRVMRDP 74
Query: 59 HGNPILHLRRALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANNT---- 114
G IL +R+ LA + WE G+S E +DL+FT ++S L+T+++VFL N
Sbjct: 75 AGFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKK 134
Query: 115 TKVCDFKVKANLSARSWVVYIGESDTVAAKIKKKFGSVFSREK--FMVTVSPNIDYAFIV 172
T CDF S S+ V+ ++D + A + +GS F + K F V V+P +DYAFI+
Sbjct: 135 TNTCDFHASGGYSNISFKVF--KADALIAGVGFTWGS-FCKGKYNFKVRVNPEVDYAFII 191
Query: 173 GLIVTLDD 180
L+V +DD
Sbjct: 192 ALLVMVDD 199
>AT3G10986.1 | Symbols: | Protein of unknown function (DUF567) |
chr3:3444203-3445672 REVERSE LENGTH=197
Length = 197
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 1 MLCCPRTASHPVDLIITKERA--LRDNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDA 58
M C P T +L++ + R R+ + V D++++++FTV + I R R L DA
Sbjct: 8 MFCNPYTT----ELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNI---RRKRVLRDA 60
Query: 59 HGNPILHLR-RALLAASDCWEAFSGKSTEPKDLIFTRKRSSLFQLRTTLNVFLANNTTKV 117
G P+L +R + L+ WE + G STE +L+F+ + +L +T+L+V L + +
Sbjct: 61 AGIPLLSMRTKGLVPMRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSST 120
Query: 118 ------CDFKVKANLSARSWVVYIGESDTVAAKIKKKF---GSVFSREKFMVTVSPNIDY 168
DF+ S+ ++ +T+ A++ F G + F V V+P +D+
Sbjct: 121 DISSVEPDFQTFGRYIGSSFKLFEPIHNTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDF 180
Query: 169 AFIVGLIVTLDD 180
AF+V L+V DD
Sbjct: 181 AFVVALLVITDD 192
>AT3G15810.1 | Symbols: | Protein of unknown function (DUF567) |
chr3:5348054-5349178 REVERSE LENGTH=220
Length = 220
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 24 DNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILHLRRALLAASDCWEAFSGK 83
D F D I+F V S + L DA G +L ++R WE F G+
Sbjct: 45 DGFAAYDCRGDIIFRVDS-YGPDTRDNDEIVLMDATGKCLLTVKRKRPTLHQRWEGFLGE 103
Query: 84 STEPKDLIFTRKRSSLFQLRTTLNVFLANNTTKVCDFKVKANLSARSWVVYIGESDTVAA 143
+E + IF+ +RSS+ R T+ V + + T + ++ + + S RS ++Y + TV A
Sbjct: 104 RSEGQKPIFSVRRSSIIG-RCTMEVEVYDGTGE--EYIIDGDFSQRSCLIYDTKKCTV-A 159
Query: 144 KIKKKFGS----VFSREKFMVTVSPNIDYAFIVGLIVTLD 179
+IK+K + + R+ F + + P D AF +GL+V LD
Sbjct: 160 EIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLD 199
>AT1G80120.1 | Symbols: | Protein of unknown function (DUF567) |
chr1:30139198-30139986 FORWARD LENGTH=210
Length = 210
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 24 DNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILHLRRALLAASDCWEAFSGK 83
D FTV D S+VF V S + L DAHG +L LRR + WE + G+
Sbjct: 31 DGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSLRRRWEGYLGE 90
Query: 84 STEPKDLIFTRKRSSLFQLRTTLNVFLANNTTKVCDFKVKANLSARSWVVYIGESDTVAA 143
++ + IF +RSS+ R ++ V + + + ++ ++ + AR+ V E+ A
Sbjct: 91 RSDGQKPIFGVRRSSIIG-RNSVTVEVYGD-YQCSEYLIEGSFGARNCTVVEAETRRKVA 148
Query: 144 KIKKKFGS----VFSREKFMVTVSPNIDYAFIVGLIVTLD 179
+I++K + + ++ F + V P D AF +GL++ LD
Sbjct: 149 EIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLD 188
>AT2G38640.1 | Symbols: | Protein of unknown function (DUF567) |
chr2:16157725-16158474 REVERSE LENGTH=196
Length = 196
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 24 DNFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILHLRRALLAASDCWEAFSGK 83
D FTV + N +VF V + + PR++ L DA G P+L +RR L+ DCW + G+
Sbjct: 37 DGFTVYNANGELVFRVDN---YMNCPRDNIVLMDASGFPLLSIRRKKLSLGDCWMVYDGE 93
Query: 84 STEPKDLIFT-RKRSSLFQLRTTLNVFLANNTTKVCDFKVKANLSARSW-VVYIGESDTV 141
+ +D IFT RK S+ R +L A T ++++ + RS ++ +
Sbjct: 94 T--ERDPIFTARKNVSIISNRKSLAWVSAKKTVL---YEIEGSYGQRSCKILDERRNKKK 148
Query: 142 AAKIKKK----FGSVFSREKFMVTVSPNIDYAFIVGLIVTLDD 180
A+IK+K G F ++ + + V ++ + L + LD
Sbjct: 149 TAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQ 191
>AT5G20640.1 | Symbols: | Protein of unknown function (DUF567) |
chr5:6984379-6985205 FORWARD LENGTH=215
Length = 215
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 25 NFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPILHLRR------ALLAASDCWE 78
F V++ +VF V ++ + L + GN +L +R+ AL + WE
Sbjct: 38 GFVVSNSKQVVVFRVDG--CGVLGTKGKLLLRNGDGNDLLLIRKMGGIVQALNMVHNKWE 95
Query: 79 AFSGKSTEPKDLIFTRK--RSSLFQLRTTLNVFLANNTTKVCD-----FKVKANLSARSW 131
F + + L+FT K + S +++ + + K+ ++K + + R+
Sbjct: 96 GFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILVHGKPPKISSTRNNYVEIKGSFAERAC 155
Query: 132 VVYIGESDTVA-AKIKKKFGSVFSREK--FMVTVSPNIDYAFIVGLIVTLD 179
+ + +A +I+K+ + +K + V V PN+D +FIVGLI LD
Sbjct: 156 NIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVKPNVDQSFIVGLIAILD 206
>AT2G05910.1 | Symbols: | Protein of unknown function (DUF567) |
chr2:2258512-2259376 REVERSE LENGTH=191
Length = 191
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 25 NFTVTDINDSIVFTVKSPLVTIVTPREHRFLHDAHGNPIL--HLRRALLAA---SDCWEA 79
F VTD + IVF + ++ + L D+ GN +L H + ++ A + W+
Sbjct: 30 GFVVTDYKEKIVFKIDG--CGVLGTKGELVLRDSDGNDLLLIHKKGGVVQALSIHNKWKG 87
Query: 80 FSGKSTEPKDLIFTRK--RSSLFQLRTTLNVFLANNTTKVCDFKVKANLSARSWVVYIGE 137
+S +FT + + S F + +++ + + C F VK R + +
Sbjct: 88 YSYDYQGSPKPVFTLRDPKHSCFSITSSIRISVGPGN---CYFDVKGYFPDRDCSI-VDS 143
Query: 138 SDTVAAKIKKKFGSVFSREKFMVTVSPNIDYAFIVGLIVTLD 179
V A++K+ GS R+ + V P++D AF+ G+I LD
Sbjct: 144 KGNVIAQVKEWIGS---RDIYKVVTKPSVDKAFVFGVIAVLD 182