Miyakogusa Predicted Gene
- Lj0g3v0040399.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0040399.1 tr|B9HGU6|B9HGU6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_562855 PE=4
SV=1,26.36,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,gene.g2926.t1.1
(248 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 3e-55
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 5e-33
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 5e-33
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 2e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 128 3e-30
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 5e-30
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 5e-30
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 7e-30
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 127 9e-30
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 1e-28
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 1e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 4e-28
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 7e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 8e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 120 9e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 119 3e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 4e-27
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 4e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 6e-27
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 9e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 2e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 4e-26
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 6e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 7e-26
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 3e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 112 3e-25
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 4e-25
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-25
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 7e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 4e-24
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 5e-24
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 7e-24
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 107 9e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 9e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 105 3e-23
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 4e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 103 8e-23
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 103 1e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 3e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 102 3e-22
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 3e-22
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 5e-22
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 9e-22
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 9e-22
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 100 1e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 1e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 4e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 6e-21
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 6e-21
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 6e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 7e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 4e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 5e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 5e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 94 6e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 7e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 8e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 8e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 8e-20
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 93 2e-19
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-19
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 4e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 5e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 8e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 9e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 89 4e-18
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 4e-18
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 88 5e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 7e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 8e-18
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 9e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 2e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 2e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 3e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 5e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 8e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 5e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 79 3e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 76 2e-14
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 3e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 75 3e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 75 3e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 71 9e-13
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 68 5e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 8e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 8e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 8e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 9e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 66 2e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 66 3e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 64 1e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 1e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 63 2e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 3e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 7e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 60 1e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 3e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 59 4e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 58 6e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 58 6e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 1e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 56 3e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 55 4e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 53 2e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 52 3e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 52 3e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 6e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 51 6e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 7e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 2e-06
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 49 4e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 8e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 9e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 1e-05
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 211 bits (537), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 153/212 (72%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+RK F PG+ D+T ++RFLV+ RG + + +LNQMK D ++PD+VCYTIVL G++A+ D
Sbjct: 242 LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED 301
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y K D+LFDE+L+LGL PDVYTYNVYINGLCKQN ++ A++++ SM KLG +PNVVT N
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ AL +AGDLS+AK + KEM GV N HT+ IM+ + E+ A LLEE
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ +SS + +I +C+KGL+++A+EL+ +V
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 123/223 (55%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + FT++I K DA + N M Q G P+VV YT ++ G+ EGD
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+EL EM +GL P+++TYN +NGLCK ++EA+++V G + VT TL+ A
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C++G++ KA+ ++KEM KG++ + T+ ++++G + + LL ML K P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++TF++++ C + + A + K + ++ P + +E L+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +T +I K A +M I PDV+ YT ++SG GD
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ +LF EM GL PD T+ ING CK + +A ++ + MI+ GC PNVVT T
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ GDL A ++ EM G++ N+ TY +++GL I EA L+ E
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T+ ++ C+ G +++A E++K+++ K P + L+
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++G C V + +I F+ + R +A ++L M+ G PDV+ Y+ V++G G+
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K+ +L + M GL P+ Y Y I LC+ K+ EA + MI+ G P+ V TL+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ GD+ A EM + + ++ TY ++ G ++ EA L EM K
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S TF +I C+ G + +A + ++ +P + L+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G P + + ++ L K +A+ ++ + + G+ D V YT ++ G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ EML GL P + T+NV +NG C +++ ++++ M+ G PN T N+
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C +L A + K+M +GV + TY ++ G + EA L +EM K
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
F ST+ +I ++ EA E+ ++ + A
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + + + G+ +V Y IV+ + G + L M + G PDV +Y+ +N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C+ ++D+ ++++ M + G KPN +++G LC L++A+ EM +G+
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ Y ++DG + +I AS EM + P T+ II CQ G + EA +L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 209 KKIVAKSFAPGARAWEALL 227
++ K P + + L+
Sbjct: 410 HEMFCKGLEPDSVTFTELI 428
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
IL +M G++P +V + ++++G G ++L + ML G+ P+ T+N + C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+N + A I M G P+ T L+ C+A ++ +A + +EM KG +++
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
TY +++ G + + + EA + ++M ++ FD
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ-NKVDEAIQI 102
DV +V G++ E V F++ML GL+ V + NVY+ L K K AI +
Sbjct: 179 DVFFQVLVDFGLLREARRV-----FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++G NV + N ++ +C+ G + +A ++ M LKG ++ +Y +++G
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
E+ + L+E M +K P S + +II +C+ + EA E +++ + P
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 223 WEALL 227
+ L+
Sbjct: 354 YTTLI 358
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 123/223 (55%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + FT++I K DA + N M Q G P+VV YT ++ G+ EGD
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+EL EM +GL P+++TYN +NGLCK ++EA+++V G + VT TL+ A
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C++G++ KA+ ++KEM KG++ + T+ ++++G + + LL ML K P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++TF++++ C + + A + K + ++ P + +E L+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +T +I K A +M I PDV+ YT ++SG GD
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ +LF EM GL PD T+ ING CK + +A ++ + MI+ GC PNVVT T
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ GDL A ++ EM G++ N+ TY +++GL I EA L+ E
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T+ ++ C+ G +++A E++K+++ K P + L+
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++G C V + +I F+ + R +A ++L M+ G PDV+ Y+ V++G G+
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K+ +L + M GL P+ Y Y I LC+ K+ EA + MI+ G P+ V TL+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ GD+ A EM + + ++ TY ++ G ++ EA L EM K
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S TF +I C+ G + +A + ++ +P + L+
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G P + + ++ L K +A+ ++ + + G+ D V YT ++ G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ EML GL P + T+NV +NG C +++ ++++ M+ G PN T N+
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C +L A + K+M +GV + TY ++ G + EA L +EM K
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
F ST+ +I ++ EA E+ ++ + A
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + + + G+ +V Y IV+ + G + L M + G PDV +Y+ +N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C+ ++D+ ++++ M + G KPN +++G LC L++A+ EM +G+
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ Y ++DG + +I AS EM + P T+ II CQ G + EA +L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 209 KKIVAKSFAPGARAWEALL 227
++ K P + + L+
Sbjct: 410 HEMFCKGLEPDSVTFTELI 428
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
IL +M G++P +V + ++++G G ++L + ML G+ P+ T+N + C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+N + A I M G P+ T L+ C+A ++ +A + +EM KG +++
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
TY +++ G + + + EA + ++M ++ FD
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ-NKVDEAIQI 102
DV +V G++ E V F++ML GL+ V + NVY+ L K K AI +
Sbjct: 179 DVFFQVLVDFGLLREARRV-----FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++G NV + N ++ +C+ G + +A ++ M LKG ++ +Y +++G
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
E+ + L+E M +K P S + +II +C+ + EA E +++ + P
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 223 WEALL 227
+ L+
Sbjct: 354 YTTLI 358
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 127/225 (56%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++ P V+ + ++R L + A+ +L++M Q PDV+ YTI++ +
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L DEM G PDV TYNV +NG+CK+ ++DEAI+ ++ M GC+PNV+T N +L
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
++C G A+ ++ +M KG ++ T+ I+++ L K +G A +LE+M +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S +++ ++ C++ ++ A+E ++++V++ P + +L
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 35/263 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P V+ + ++ + KE R +A+ LN M G +P+V+ + I+L + + G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYIN-------------------------------- 88
++ ++L +ML G P V T+N+ IN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 89 ---GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
G CK+ K+D AI+ ++ M+ GC P++VT NT+L ALC+ G + A ++ ++ KG
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L TY ++DGL + G+A LL+EM K P + T+ +++ + ++G ++EA+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 206 ELMKKIVAKSFAPGARAWEALLL 228
+ + P A + +++L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIML 527
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 3/223 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + MI K +AL +L++M + PDVV Y +L + G +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ D ML PDV TY + I C+ + V A++++D M GC P+VVT N L+
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+C+ G L +A + +M G + N+ T+ I+L + +A LL +ML+K F P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+ +I +C+KGL+ A+++++K+ P + ++ LL
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P V+ F +I FL ++ A+ IL +M Q G +P+ + Y +L G E
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E + M+ G PD+ TYN + LCK KV++A++I++ + GC P ++T NT
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ L +AG KA ++ EM K ++ + TY ++ GL + ++ EA E +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + TF++I+ +C+ + A++ + ++ + P ++ L+
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 117/211 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +I ++ A+ +L++M+ G PDVV Y ++++GI EG + +
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++M G P+V T+N+ + +C + +A +++ M++ G P+VVT N L+ LC
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L +A ++++M G + N +Y +L G + ++ A LE M+ + YP T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
++ ++ +C+ G + +A+E++ ++ +K +P
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + M+ L K+ + DA+ ILNQ+ G P ++ Y V+ G+ G
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +L DEM L PD TY+ + GL ++ KVDEAI+ ++G +PN VT N+
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC++ +A + M +G + N +Y I+++GL + EA LL E+ K
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 181 FYPRSS 186
+SS
Sbjct: 585 LMKKSS 590
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
++ + +R +V+ + L M G PD++ T ++ G G K ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
+ G +PDV TYNV I+G CK +++ A+ ++D M P+VVT NT+L +LC++G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
L +A V+ M + ++ TY I+++ + +G A LL+EM + P T++
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAP 218
++ +C++G ++EA++ + + + P
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + ++ KE++ A+ L +M G PD+V Y +L+ + +G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+ +++ G P + TYN I+GL K K +AI+++D M KP+ +T ++
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G L G + +A E G+ N T+ ++ GL + A L M+ +
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
P +++ +I + +G+ EALEL+ ++ K + A +
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 52 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 111
L +V G+ + + + M+ G +PD+ I G C+ K +A +I++ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 112 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 171
P+V+T N ++ C+AG+++ A V+ M V ++ TY +L L ++ +A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 172 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+L+ ML++ YP T+ +I C+ + A++L+ ++ + P + L+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
N ++ + + +++E + +++M+ G P+++ C TL+ C G KA +++ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G ++ TY +M+ G EI A +L+ M P T++ I+ +C G + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 204 ALELMKKIVAKSFAPGARAWEALL 227
A+E++ +++ + P + L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILI 246
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 118/224 (52%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
GF PGV+ + ++ ++ +R + A + +M + + P+V Y I++ G G+
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
LFD+M G +P+V TYN I+G CK K+D+ +++ SM G +PN+++ N ++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC G + + V+ EM +G L+ TY ++ G + +A ++ EML+ P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++I MC+ G +N A+E + ++ + P R + L+
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 15/242 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P V+ + +I + DA+ +L MK+ G+ PDVV Y+ VLSG D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + EM+ G+ PD TY+ I G C+Q + EA + + M+++G P+ T
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A C GDL KA + EM KGV ++ TY ++++GL ++ EA LL ++ +
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 181 FYPRSSTFDNII--CC-------------MCQKGLINEALELMKKIVAKSFAPGARAWEA 225
P T+ +I C C KG++ EA ++ + ++ K+ P A+
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 226 LL 227
++
Sbjct: 646 MI 647
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ +T +I + K A+ L+QM+ G+ P+ YT ++ G +G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + EM G P V TYN ING C K+++AI +++ M + G P+VV+ +T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L C + D+ +A V +EM KG++ + TY ++ G + EA L EEML+
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +I C +G + +AL+L ++V K P + L+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + +I K + D +L M G++P+++ Y +V++G+ EG
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ + EM G D TYN I G CK+ +A+ + M++ G P+V+T +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ++C+AG++++A + +M ++G+ N TY ++DG K + EA +L EM
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P T++ +I C G + +A+ +++ + K +P ++ +L
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 114/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + +I L +E R + ++L +M + G D V Y ++ G EG++ +
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ EML GL P V TY I+ +CK ++ A++ +D M G PN T TL+
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G +++A V++EM G ++ TY +++G ++ +A +LE+M +K P
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ ++ C+ ++EAL + +++V K P + +L+
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G+ + + +I+ KE AL + +M + G+ P V+ YT ++ + G+
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E D+M V GL P+ TY ++G ++ ++EA +++ M G P+VVT N
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G + A V+++M KG+ ++ +Y +L G ++ EA + EM++K
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+ ++I C++ EA +L ++++ P + AL+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 50/269 (18%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + ++ +I+ ++ R +A + +M + G+ PD YT +++ EGD
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI-------------------- 100
K +L +EM+ G++PDV TY+V INGL KQ++ EA
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 101 ------------------------------QIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
Q+ +SM+ KP+ N ++ C AGD
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ KA + KEM G L+ T ++ L + ++ E + ++ +L+ C +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPG 219
++ ++G ++ L+++ ++ F P
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG-DLSKAKGVMKEM 141
+++ + + + +D+A+ IV G P V++ N +L A + ++S A+ V KEM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
V N+ TY I++ G I A L ++M K P T++ +I C+ I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
++ +L++ + K P ++ ++
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVI 282
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 125/227 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR F P + + MI L + AL +LNQ+ D +P V+ YTI++ + EG
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L DEML GL PD++TYN I G+CK+ VD A ++V ++ GC+P+V++ N
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL AL G + + +M +M + + N+ TY I++ L +I EA LL+ M +K
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + ++D +I C++G ++ A+E ++ +++ P + +L
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 118/221 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++R L+ + + + ++ +M + P+VV Y+I+++ + +G + L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M GL PD Y+Y+ I C++ ++D AI+ +++MI GC P++V NT+L LC+
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A + ++G G N +Y M L + A ++ EM+ P T
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
++++I C+C++G+++EA EL+ + + F P + +LL
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 119/223 (53%), Gaps = 6/223 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD-- 65
P V + +I K R DA +L++M+ PD V Y I++ + + G KLD
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG---KLDLA 212
Query: 66 -ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ +++L P V TY + I + VDEA++++D M+ G KP++ T NT++
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+C+ G + +A +++ + LKG E ++ +Y I+L L+ + + E L+ +M + P
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I +C+ G I EA+ L+K + K P A +++ L+
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 113/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I L ++ + +A+ +L MK+ G+ PD Y +++ EG E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M+ G +PD+ YN + LCK K D+A++I + ++GC PN + NT+ AL
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+GD +A ++ EM G++ + TY M+ L + + EA LL +M F+P T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ ++ C+ I +A+ +++ +V P + L+
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 34/203 (16%)
Query: 59 GDYVKLDELFDEMLVLG----------LI------------------------PDVYTYN 84
G+Y++ L + M+ G LI PDV+ YN
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYN 162
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
ING CK N++D+A +++D M P+ VT N ++G+LC G L A V+ ++
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
+ + TY I+++ + + + EA L++EML + P T++ II MC++G+++ A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
E+++ + K P ++ LL
Sbjct: 283 FEMVRNLELKGCEPDVISYNILL 305
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++++ ++ L K + AL I ++ + G P+ Y + S + + GD ++
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ EM+ G+ PD TYN I+ LC++ VDEA +++ M P+VVT N +L
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
C+A + A V++ M G N TY ++++G+ EA L ++++
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + +I +E R A+ L M DG PD+V Y VL+ + G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+F ++ +G P+ +YN + L A+ ++ M+ G P+ +T N+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC G + +A ++ +M ++ TY I+L G I +A +LE M+
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
P +T+ +I + G EA+EL +V
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
C+ E++ ++++M++ G P+V+ C L+ ++ KA VM E+ K + ++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
Y +++G I +A+ +L+ M K F P + T++ +I +C +G ++ AL+++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 211 IVAKSFAPGARAW----EALLLHSGSD 233
+++ + P + EA +L G D
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVD 245
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 124/227 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P V +T ++ K + +A +LN+M DG+KP+ V + ++S E
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+F EM G PDVYT+N I+GLC+ +++ A+ ++ MI G N VT NT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A G++ +A+ ++ EM +G L+ TY ++ GL E+ +A L E+ML+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + + + +I +C+ G++ EA+E K++V + P + +L+
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + +I KE AL +L+ M+ G KP+V YTI++ G G K+
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG---KI 440
Query: 65 DELFD---EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
DE ++ EM GL P+ +N I+ CK++++ EA++I M + GCKP+V T N+L
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ LCE ++ A ++++M +GV N TY +++ + + EI EA L+ EM+ +
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
T++++I +C+ G +++A L +K++ AP
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V F +I L + + AL++L M +G+ + V Y +++ + G+
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L +EM+ G D TYN I GLC+ +VD+A + + M++ G P+ ++CN
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC +G + +A KEM L+G ++ T+ +++GL I + + ++ +
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + TF+ ++ +C+ G + +A L+ + + F P R W LL
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 115/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + F +I KE R +A+ I +M + G KPDV + ++SG+ +
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +M+ G++ + TYN IN ++ ++ EA ++V+ M+ G + +T N+L+
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC AG++ KA+ + ++M G + + I+++GL + EA +EM+ + P
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+++I +C+ G I + L + +K+ A+ P + L+
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDE----LFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
KP++V + ++ G V G +LD+ L D + G++PDV TYN I G K+ V
Sbjct: 350 KPEIVIFNTLIHGFVTHG---RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
A++++ M GCKPNV + L+ C+ G + +A V+ EM G++ N + ++
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
+ I EA + EM +K P TF+++I +C+ I AL L++ ++++
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 218 PGARAWEALL 227
+ L+
Sbjct: 527 ANTVTYNTLI 536
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+P Y +VL +V+ + +F +ML + P ++T+ V + C N++D A+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
++ M K GC PN V TL+ +L + +++A +++EM L G + T+ ++ GL
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
I EA+ ++ ML + F P T+ ++ +C+ G ++ A +L +I
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I+ L + A + +M +DG P + I+++G+ G + E EM+
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ G PD+ T+N INGLC+ ++++ + + + G P+ VT NTL+ LC+ G +
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
A ++ E G N T+ I+L ++ +
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 5/214 (2%)
Query: 1 MRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR + C P + ++ LV A + M I P + + +V+ A
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ L +M G +P+ Y I+ L K N+V+EA+Q+++ M +GC P+ T N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ LC+ +++A ++ M ++G + TY +++GL + A L + K
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 350
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
P F+ +I G +++A ++ +V
Sbjct: 351 ---PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Query: 23 EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-VLGLIPDVY 81
E + +D L I QMK +GI + ++ G + L EM V P
Sbjct: 126 EFKTIDRLLI--QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFK 183
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
+YNV + L N A + M+ P + T ++ A C ++ A ++++M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G N Y+ ++ L + EA LLEEM P + TF+++I +C+ I
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 202 NEALELMKKIVAKSFAP 218
NEA +++ +++ + FAP
Sbjct: 304 NEAAKMVNRMLIRGFAP 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
Q+G + Y +++ + A G++ +D L +M G+ V+ +++I+ + +K
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI---VFKESLFISIMRDYDKAG 160
Query: 98 EAIQIVDSMIKL----GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
Q M+++ C+P + N +L L A V +M + + L T+
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF 220
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+++ EI A LL +M K P S + +I + + +NEAL+L++++
Sbjct: 221 GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
Query: 214 KSFAPGARAWEALLL 228
P A + ++L
Sbjct: 281 MGCVPDAETFNDVIL 295
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 120/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ ++ +I L ER DA +L+ M + I P+VV + ++ V EG
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT NT
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + + + +EM +G+ N TY ++ G + A ++ ++M+
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T++ ++ +C+ G + +A+ + + + P + ++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ + ++ +R DA+ +++QM + G +PD + +T ++ G+
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+ G P++ TY V +NGLCK+ +D A +++ M + NVV +T
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +LC+ A + EM KGV N+ TY ++ L +AS LL +M+++
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I ++G + EA +L +++ +S P + +L+
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P + FT +I L + +A+ ++++M Q G +P++V Y +V++G+ GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L ++M + +V Y+ I+ LCK D+A+ + M G +PNV+T ++
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC S A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C ++EA + + +++K P + L+
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 110/209 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
F G D+ +++R + + DA+ + M + P + + +LS I + +
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L ++M LG+ ++YTYN+ IN C+++++ A+ ++ M+KLG +P++VT ++LL
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C +S A ++ +M G + T+ ++ GL + EA L++ M+++ P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVA 213
T+ ++ +C++G I+ A L+ K+ A
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K +R + + + +M Q G+ + V YT ++ G D +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G+ P++ TYN ++GLCK K+++A+ + + + + +P + T N ++ +C+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ ++ Y M+ G K EA L +M + P S T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
NGL K+D+AI + M+K P++ N LL A+ + + ++M G+
Sbjct: 59 NGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
NL+TY I+++ +++I A LL +M+K + P T +++ C I++A+ L
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ ++V + P + L+
Sbjct: 178 VDQMVEMGYRPDTITFTTLI 197
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +M + ++ L K + A+ + +++ ++P + Y I++ G+ G
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+LF + + G+ PDV YN I+G C++ +EA + M + G P+ T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 122/220 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ L KEER +A+ +L++M+ +G P V Y +++ G+ +GD ++ +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
D M + G +P+ TYN I+GLC + K+D+A+ +++ M+ C PN VT TL+ L +
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ A ++ M +G LN H Y +++ GL + + EA L +M +K P
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +C++G NEA E++ +++A P A + +L+
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 114/207 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I LVK+ R DA+ +L+ M++ G + Y++++SG+ EG + L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +M G P++ Y+V ++GLC++ K +EA +I++ MI GC PN T ++L+ +
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A V KEM G N Y +++DGL G + EA ++ +ML P +
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+ +II +C G ++ AL+L +++ +
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +I L KE + +A+ + +M + G KP++V Y++++ G+ EG + E+ + M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 73 VLGLIPDVYTYN-----------------------------------VYINGLCKQNKVD 97
G +P+ YTY+ V I+GLC +V
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK---GVELNLHTYR 154
EA+ + M+ +G KP+ V ++++ LC G + A + EM + + ++ TY
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
I+LDGL + +I A LL ML + P T + + + +K
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I L + + A+ +L +M P+ V Y +++G+V +
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L M G + + Y+V I+GL K+ K +EA+ + M + GCKPN+V + L+
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G ++AK ++ M G N +TY ++ G EA + +EM K
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C G + EA+ + K++ P A+ +++
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEM----LVLGLIPDVYTYNVYINGLCKQNKVD 97
K V + VL+ I+ EG Y + E +D + + + + P+ ++N+ I LCK VD
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVD 204
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
AI++ M + C P+ T TL+ LC+ + +A ++ EM +G + Y +++
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
DGL K ++ + L++ M K P T++ +I +C KG +++A+ L++++V+
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 218 PGARAWEALL 227
P + L+
Sbjct: 325 PNDVTYGTLI 334
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 24/226 (10%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +++ K +A+ + +M + G + CY++++ G+ G +
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI---KLGCKPNVVTCNTL 121
++ +ML +G+ PD Y+ I GLC +D A+++ M+ + +P+VVT N L
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA----------------- 164
L LC D+S+A ++ M +G + ++ T L+ L K+
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRL 606
Query: 165 ----EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ A ++E ML K P++ST+ I+ +C+ IN A++
Sbjct: 607 LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 112/207 (54%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF ++ + +I R D +L M + I P+VV +++++ V EG +
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D+L EM+ G+ P+ TYN I+G CK+N+++EAIQ+VD MI GC P+++T N L+
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+A + + +EM L+GV N TY ++ G ++ A L +EM+ + P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
++ ++ +C G + +ALE+ KI
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V+ F+ +I VKE + +A +L +M Q GI P+ + Y ++ G E
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ D M+ G PD+ T+N+ ING CK N++D+ +++ M G N VT NT
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++G L AK + +EM + V ++ +Y+I+LDGL E+ +A + ++ K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ II MC +++A +L + K ARA+ ++
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P + + ++ + K + A+ +L +M++ IK D V Y+I++ G+ +G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF+EM + G D+ TYN I G C + D+ +++ MIK PNVVT +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + + G L +A ++KEM +G+ N TY ++DG + + EA +++ M+ K
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I C+ I++ LEL +++ + + L+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 121/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ ++ L + DA+ ++++M + G +P+ V Y VL+ + G
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL +M + D Y++ I+GLCK +D A + + M G K +++T NT
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G C AG ++++M + + N+ T+ +++D V + ++ EA LL+EM+++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T++++I C++ + EA++++ +++K P + L+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + MI + + A + ++ + G +PD V + +L+G+ E
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL D M+ +G P + T N +NGLC KV +A+ ++D M++ G +PN VT
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L +C++G + A ++++M + ++L+ Y I++DGL + A L EM K
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F T++ +I C G ++ +L++ ++ + +P + L+
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 114/225 (50%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + F ++ L E R +AL ++++M + G KP ++ +++G+ G
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
L D M+ G P+ TY +N +CK + A++++ M + K + V + ++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A + EM +KG + ++ TY ++ G + + LL +M+K+
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I ++G + EA +L+K+++ + AP + +L+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + M Q P V+ + + S I Y + L +M G+ +YT ++ I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+ K+ A + ++KLG +P+ V NTLL LC +S+A ++ M G +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L T +++GL ++ +A +L++ M++ F P T+ ++ MC+ G A+EL
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 208 MKKIVAKSFAPGARAWEALL 227
++K+ ++ A + ++
Sbjct: 251 LRKMEERNIKLDAVKYSIII 270
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +M F +I K R D L + +M G+ + V Y ++ G G +L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM+ + PD+ +Y + ++GLC ++++A++I + K + ++ ++ +C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
A + A + + LKGV+L+ Y IM+ L K + +A +L +M ++ P T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSF 216
++ +I A EL++++ + F
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + +M ++PD+V Y I+L G+ G+ K E+F ++ + D+ Y + I+
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G+C +KVD+A + S+ G K + N ++ LC LSKA + ++M +G
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+ TY I++ +G + A+ L+EEM F ST +I
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 68/132 (51%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL I ++++ ++ D+ Y I++ G+ +LF + + G+ D YN+ I+
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LC+++ + +A + M + G P+ +T N L+ A D + A +++EM G
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 149 NLHTYRIMLDGL 160
++ T +++++ L
Sbjct: 612 DVSTVKMVINML 623
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 62/124 (50%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K D+A+ + MI+ P V+ N L A+ + + K+M KG+ +++T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
IM++ ++ A + +++K + P + F+ ++ +C + ++EALEL+ ++V
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 215 SFAP 218
P
Sbjct: 188 GHKP 191
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ + G P V+ +T ++ L R DA +L+ M + I P+V+ Y+ +L V G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ ELF+EM+ + + PD+ TY+ INGLC +++DEA Q+ D M+ GC +VV+ NT
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 121 LLGALC-----------------------------------EAGDLSKAKGVMKEMGLKG 145
L+ C +AGD+ KA+ +M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ TY I+L GL E+ +A ++ E+M K+ T+ +I MC+ G + EA
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L + K P + ++
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMM 477
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++DF ++ +VK ++ + + +M+ GI+ D+ + IV++ +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ML LG PD T +NG C++N+V +A+ +VD M+++G KP++V N ++ +LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++ A KE+ KG+ N+ TY +++GL + +A+ LL +M+KK P T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ + G + EA EL +++V S P + +L+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V+ + +I K +R D + + +M Q G+ + V Y ++ G GD K
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E F +M G+ PD++TYN+ + GLC ++++A+ I + M K ++VT T++
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+C+ G + +A + + LKG++ ++ TY M+ GL K + E L +M ++
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
C G I + EL+KK+++ +AP
Sbjct: 505 D--------CTLSDGDITLSAELIKKMLSCGYAPS 531
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL IL +M + G +PD V +++G L D+M+ +G PD+ YN I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LCK +V++A + + G +PNVVT L+ LC + S A ++ +M K +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY +LD V ++ EA L EEM++ P T+ ++I +C I+EA ++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 209 KKIVAK 214
+V+K
Sbjct: 319 DLMVSK 324
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 114/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P + ++ + R DA+ ++++M + G KPD+V Y ++ +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F E+ G+ P+V TY +NGLC ++ +A +++ MIK PNV+T +
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL A + G + +AK + +EM ++ ++ TY +++GL I EA+ + + M+ K
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ +I C+ + + ++L +++ + + L+
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 71/133 (53%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K+++AI + M+K P++V N LL A+ + + K+M + G+ +L+T+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
I+++ ++ A +L +MLK + P T +++ C++ +++A+ L+ K+V
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 215 SFAPGARAWEALL 227
+ P A+ A++
Sbjct: 185 GYKPDIVAYNAII 197
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + +IR L R DA +L+ M + I P+VV ++ ++ V EG
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT NT
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + + + +EM +G+ N TY ++ G E A ++ ++M+
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++ +C G + AL + + + P + ++
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P F +I L + R +A+ ++++M G +PD+V Y IV++G+ GD
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +M + P V YN I+ LC V++A+ + M G +PNVVT N+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G S A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C ++EA + + +++K P + L+
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG + ++ +I + + AL +L +M + G +PD+V +L+G
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +M+ +G PD +T+N I+GL + N+ EA+ +VD M+ GC+P++VT
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ GD+ A ++K+M +E + Y ++D L + +A L EM K
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++++I C+C G ++A L+ ++ + P + AL+
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ ++ R DA+ ++ QM + G +PD + ++ G+
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+V G PD+ TY + +NGLCK+ +D A+ ++ M + +P VV NT
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ ALC +++ A + EM KG+ N+ TY ++ L +AS LL +M+++
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I ++G + EA +L +++ +S P + +L+
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 115/226 (50%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I+ K +R + + + +M Q G+ + V YT ++ G + +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G++PD+ TY++ ++GLC KV+ A+ + + + + +P++ T N ++ +C+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ N+ TY M+ G K EA L EM ++ P S T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 231
++ +I + G + EL++++ + F A + +LH G
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 107/200 (53%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + M + P +V ++ +LS I + + L ++M LG+ ++YTY++ I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+++++ A+ ++ M+KLG +P++VT N+LL C +S A ++ +M G +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ T+ ++ GL EA L++ M+ K P T+ ++ +C++G I+ AL L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 208 MKKIVAKSFAPGARAWEALL 227
+KK+ PG + ++
Sbjct: 244 LKKMEQGKIEPGVVIYNTII 263
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + +T +I + +A + QM DG+ PD++ Y+I+L G+ G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+ + + PD+YTYN+ I G+CK KV++ + S+ G KPNVVT T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G +A + +EM +G + TY ++ + + ++ L+ EM + C
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-RSC 600
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ ++ M G ++++
Sbjct: 601 RFVGDASTIGLVTNMLHDGRLDKSF 625
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 70/133 (52%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K+D+A+ + M+K P++V + LL A+ + + ++M G+ NL+TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
I+++ ++++ A +L +M+K + P T ++++ C I++A+ L+ ++V
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 215 SFAPGARAWEALL 227
+ P + + L+
Sbjct: 181 GYQPDSFTFNTLI 193
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V ++ +I L R DA +L+ M + I P+VV ++ ++ V EG
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT +T
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 121 LLGALC-----------------------------------EAGDLSKAKGVMKEMGLKG 145
L+ C +A D A+ V K+M G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V N+ TY I+LDGL ++ +A ++ E + + P T++ +I MC+ G + +
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
EL + K +P A+ ++
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMI 545
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG + ++ I + + AL +L +M + G +PD+V + +L+G
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L D+M+ +G PD +T+ I+GL NK EA+ +VD M++ GC+P++VT T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ GD+ A ++K+M +E ++ Y ++DGL + +A L EM K
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C+C G ++A L+ ++ + P + AL+
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P FT +I L + +A+ +++QM Q G +PD+V Y V++G+ GD
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +M + DV YN I+GLCK +D+A+ + M G +P+V T ++
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G S A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C ++EA + + +++K P + L+
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ + ++ +R DA+ +++QM + G KPD +T ++ G+
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D+M+ G PD+ TY +NGLCK+ +D A+ ++ M K + +VV NT
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ + A + EM KG+ ++ TY ++ L +AS LL +M+++
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I ++G + EA +L +++ +S P + +L+
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I+ K +R + + + +M Q G+ + V YT ++ G D +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ +G+ P++ TYN+ ++GLCK K+ +A+ + + + + +P++ T N ++ +C+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV N+ Y M+ G K EA LL++M + P S T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 231
++ +I + G + EL+K++ + FA A + +LH G
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 106/184 (57%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + M + P +V + +LS + + + L ++M LG+ D+YTY+++I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+++++ A+ ++ M+KLG +P++VT ++LL C + +S A ++ +M G +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ T+ ++ GL + EA L+++M+++ P T+ ++ +C++G I+ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 208 MKKI 211
+KK+
Sbjct: 246 LKKM 249
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + +T +I + +A + QM G+ P+++ Y I+L G+ G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +F+ + + PD+YTYN+ I G+CK KV++ ++ ++ G PNV+ NT
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G +A ++K+M G N TY ++ + + ++ L++EM + C
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM-RSC 602
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ ++ M G ++++
Sbjct: 603 GFAGDASTIGLVTNMLHDGRLDKSF 627
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
KVD+A+ + M+K P++V N LL A+ + + ++M G+ +L+TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
I ++ ++++ A +L +M+K + P T +++ C I++A+ L+ ++V
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 215 SFAPGARAWEALL 227
+ P + L+
Sbjct: 183 GYKPDTFTFTTLI 195
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 112/211 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ ++ MI + R DA +L M + I PDVV ++ +++ +V EG
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E++ +ML G+ P TYN I+G CKQ+++++A +++DSM C P+VVT +T
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + + EM +G+ N TY ++ G ++ A LL M+
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P TF +++ +C K + +A +++ +
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L++M++ IK VV Y ++ + +G ++ LF EM G+ PDV TY+ I+
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
C+ + +A Q++ MI+ P+VVT + L+ AL + G +S+A+ + +M +G+
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
TY M+DG + + +A +L+ M K P TF +I C+ ++ +E+
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + + L+
Sbjct: 240 CEMHRRGIVANTVTYTTLI 258
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 108/218 (49%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ + +I L K+ + A + +M GI PDV+ Y+ ++ G + ++L
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M+ + PDV T++ IN L K+ KV EA +I M++ G P +T N+++ C+
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
L+ AK ++ M K ++ T+ +++G + + EM ++ + T+
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I CQ G ++ A +L+ +++ AP ++++L
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ FT ++ L E R + AL ++++M ++G +P Y +++G+ GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +M + V YN I+ LCK A + M G P+V+T +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ + C +G + A+ ++++M + + ++ T+ +++ LV + ++ EA + +ML++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T++++I C++ +N+A ++ + +KS +P + L+
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 109/211 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ + MI R DA +L M + I PD+V ++ +++ V E
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E++ EML + P TYN I+G CKQ++VD+A +++DSM GC P+VVT +T
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + + EM +G+ N TY ++ G ++ A LL EM+
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P TF ++ +C K + +A +++ +
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F+ +I VKE + +A I +M + I P + Y ++ G + +
Sbjct: 78 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
D M G PDV T++ ING CK +VD ++I M + G N VT TL+ C+
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 197
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
GDL A+ ++ EM GV + T+ ML GL K E+ +A +LE++ K
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 103/214 (48%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
T ++ L K+ ++A + +M + GI P+V+ Y ++ G + D+L M+
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
+ PD+ T++ IN K+ KV EA +I M++ P +T N+++ C+ +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
AK ++ M KG ++ T+ +++G + + EM ++ + T+ +I
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
CQ G ++ A +L+ ++++ AP + +L
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M Q IK DVV T ++ + +G+++ LF EM G+ P+V TYN I+ C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+A Q++ MI+ P++VT + L+ A + +S+A+ + KEM + TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
M+DG + + +A +L+ M K P TF +I C+ ++ +E+ ++ +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 216 FAPGARAWEALL 227
+ L+
Sbjct: 181 IVANTVTYTTLI 192
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ F+ +I K +R + + I +M + GI + V YT ++ G GD
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 108
+L +EM+ G+ PD T++ + GLC + ++ +A I++ + K
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 7/232 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ +T ++ L R DA +L M + IKPDV+ + ++ V EG
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +EL++EM+ + + P+++TY ING C + VDEA Q+ M GC P+VV +
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLK 178
L+ C+ + A + EM KG+ N TY ++ G VGK + + + M+
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE--VFSHMVS 380
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEAL---ELMKKIVAKSFAPGARAWEALL 227
+ P T++ ++ C+C G + +AL E M+K AP + LL
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLGF P ++ FT +I R +A+ ++NQM + GIKPDVV YT ++ + G
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LFD+M G+ PDV Y +NGLC + +A ++ M K KP+V+T N
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A + G A+ + EM + N+ TY +++G + + EA + M K
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + ++I C+ +++A+++ ++ K + L+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 113/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++DFT ++ + K ++ + + + ++ G+ D+ ++++
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG PD+ T+ ING C N+++EA+ +V+ M+++G KP+VV T++ +LC+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++ A + +M G+ ++ Y +++GL +A LL M K+ P T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+ +I ++G +A EL +++ S AP + +L+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 103/199 (51%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A L +M + G +PD+V +T +++G + + ++M+ +G+ PDV Y I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LCK V+ A+ + D M G +P+VV +L+ LC +G A +++ M + ++
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ T+ ++D V + + +A L EM++ P T+ ++I C +G ++EA ++
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 209 KKIVAKSFAPGARAWEALL 227
+ K P A+ +L+
Sbjct: 306 YLMETKGCFPDVVAYTSLI 324
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ +T +I K ++ DA+ I +M Q G+ + + YT ++ G G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL---GCKPNVVT 117
E+F M+ G+ P++ TYNV ++ LC KV +A+ I + M K G PN+ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N LL LC G L KA V ++M + +++ + TY I++ G+ ++ A L +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
K P T+ +I + ++GL +EA L +K+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 106/223 (47%), Gaps = 4/223 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
FC ++ +++R + + +AL + M + P ++ +T +L+ I + +
Sbjct: 36 AFC----NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVV 91
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L D + ++G+ D+YT N+ +N C+ ++ A + M+KLG +P++VT +L+
Sbjct: 92 INLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLING 151
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C + +A ++ +M G++ ++ Y ++D L + A L ++M P
Sbjct: 152 FCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +++ +C G +A L++ + + P + AL+
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ---DGIKPDVVCYTIVLSGIVA 57
M G P + + ++ L + AL I M++ DG+ P++ Y ++L G+
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
G K +F++M + + TY + I G+CK KV A+ + S+ G KPNVVT
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
T++ L G +A + ++M GV
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 1/191 (0%)
Query: 22 KEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
KE R DAL + +M QDG PD + +++G+ G E+ D ML G PDV
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
YTYN I+GLCK +V EA++++D MI C PN VT NTL+ LC+ + +A + +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
+ KG+ ++ T+ ++ GL A L EEM K P T++ +I +C KG
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 201 INEALELMKKI 211
++EAL ++K++
Sbjct: 451 LDEALNMLKQM 461
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 117/220 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I L KE + +A + + GI PDV + ++ G+ ++ EL
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM G PD +TYN+ I+ LC + K+DEA+ ++ M GC +V+T NTL+ C+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
A +A+ + EM + GV N TY ++DGL + +A+ L+++M+ + P T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++++ C+ G I +A ++++ + + P + L+
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + +I L + + +AL +L QM+ G V+ Y ++ G
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E+FDEM V G+ + TYN I+GLCK +V++A Q++D MI G KP+ T N+
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL C GD+ KA +++ M G E ++ TY ++ GL + AS LL + K
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
++ +I + +K EA+ L ++++ ++ AP
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 35/260 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F ++ L K A+ I++ M Q+G PDV Y V+SG+ G+ +
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE-------------------------- 98
E+ D+M+ P+ TYN I+ LCK+N+V+E
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 99 ---------AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
A+++ + M GC+P+ T N L+ +LC G L +A ++K+M L G +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ TY ++DG + EA + +EM S T++ +I +C+ + +A +LM
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 210 KIVAKSFAPGARAWEALLLH 229
+++ + P + +LL H
Sbjct: 530 QMIMEGQKPDKYTYNSLLTH 549
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V F +I+ L + + A+ +L M G+ PD +T V+ G + EGD
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCN 119
+ ++M+ G + NV ++G CK+ +V++A+ + M G P+ T N
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ LC+AG + A +M M +G + +++TY ++ GL E+ EA +L++M+ +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T++ +I +C++ + EA EL + + +K P + +L+
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V F +I+ L A+ + +M+ G +PD Y +++ + ++G KL
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG---KL 451
Query: 65 DE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
DE + +M + G V TYN I+G CK NK EA +I D M G N VT NTL
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ LC++ + A +M +M ++G + + +TY +L +I +A+ +++ M
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSET 239
P T+ +I +C+ G + A +L++ I K A+ ++ L T +
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 240 TFAGLFNQN 248
F + QN
Sbjct: 632 LFREMLEQN 640
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDEL-FDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
G+KPD Y +L+ ++ +G+ +KL E+ +M V G+ PDV T+NV I LC+ +++
Sbjct: 149 GLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
AI +++ M G P+ T T++ E GDL A + ++M G + + +++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 159 GLVGKAEIGEASLLLEEMLKK-CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
G + + +A ++EM + F+P TF+ ++ +C+ G + A+E+M ++ + +
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 218 PGARAWEALL 227
P + +++
Sbjct: 328 PDVYTYNSVI 337
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 116/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F+ +I VKE + ++A + N+M GI PD + Y ++ G E + +++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD M+ G PD+ TY++ IN CK +VD+ +++ + G PN +T NTL+ C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G L+ AK + +EM +GV ++ TY I+LDGL E+ +A + E+M K
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ II MC +++A L + K P + ++
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 115/211 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V+ ++ +I L + + D +L +M I PDVV ++ ++ V EG
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ EL++EM+ G+ PD TYN I+G CK+N + EA Q+ D M+ GC+P++VT +
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C+A + + +E+ KG+ N TY ++ G ++ A L +EM+ +
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P T+ ++ +C G +N+ALE+ +K+
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 116/219 (52%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ ++ +I L K+ DAL + N+M+ GIK DVV Y+ ++ G+ +G + ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
EM+ +IPDV T++ I+ K+ K+ EA ++ + MI G P+ +T N+L+ C+
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
L +A + M KG E ++ TY I+++ + + L E+ K P + T+
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ CQ G +N A EL +++V++ P + LL
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 115/228 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P + + ++ L K AL + +M++ IK VV Y+IV+ + +G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF+EM + G+ DV TY+ I GLC K D+ +++ MI P+VVT +
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G L +AK + EM +G+ + TY ++DG + + EA+ + + M+ K
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P T+ +I C+ +++ + L ++I +K P + L+L
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 4 LGFCPGV---------MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG 54
LGFC G+ T MI ++++ + A +L + + G +PD + ++ +++G
Sbjct: 90 LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149
Query: 55 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
EG + L D M+ + PD+ T + INGLC + +V EA+ ++D M++ G +P+
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
VT +L LC++G+ + A + ++M + ++ ++ Y I++D L +A L
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
EM K T+ ++I +C G ++ +++++++ ++ P + AL+
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 115/225 (51%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + F+ ++ E R +A+ ++++M + +PD+V + +++G+ +G
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ L D M+ G PD TY +N LCK A+ + M + K +VV + ++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
+LC+ G A + EM +KG++ ++ TY ++ GL + + + +L EM+ +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I ++G + EA EL +++ + AP + +L+
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I KE +A + + M G +PD+V Y+I+++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
LF E+ GLIP+ TYN + G C+ K++ A ++ M+ G P+VVT LL
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G+L+KA + ++M + L + Y I++ G+ +++ +A L + K P
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I +C+KG ++EA L +K+ P + L+
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 116/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I L + R +AL ++++M + G +PD V Y VL+ + G+ +L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M + V Y++ I+ LCK D+A+ + + M G K +VVT ++L+G LC
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +++EM + + ++ T+ ++D V + ++ EA L EM+ + P + T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I C++ ++EA ++ +V+K P + L+
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ + + A + +M G+ P VV Y I+L G+ G+ K
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+F++M + + YN+ I+G+C +KVD+A + S+ G KP+VVT N ++G
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G LS+A + ++M G + TY I++ +G + + + L+EEM F
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 185 SSTFDNIICCMCQKGLINEALELM 208
SST +I + + L L+++
Sbjct: 595 SSTIKMVIDMLSDRRLDKSFLDML 618
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ ++ +I K +R D + + ++ G+ P+ + Y ++ G G EL
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM+ G+ P V TY + ++GLC ++++A++I + M K + N ++ +C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
A + A + + KGV+ ++ TY +M+ GL K + EA +L +M + P T
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 188 FDNII-CCMCQKGLIN--EALELMK 209
++ +I + GLI+ E +E MK
Sbjct: 563 YNILIRAHLGGSGLISSVELIEEMK 587
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + M Q P + + + S + Y + M + G+ D+YT + I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C++ K+ A ++ KLG +P+ +T +TL+ C G +S+A ++ M
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+L T +++GL K + EA +L++ M++ F P T+ ++ +C+ G AL+L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 208 MKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
+K+ ++ + ++ D ++ + LFN+
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL--SLFNE 270
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
KV++AI + +SMI+ P + N L A+ G K M L G+E +++T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
IM++ K ++ A +L K + P + TF ++ C +G ++EA+ L+ ++V
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 215 SFAP 218
P
Sbjct: 170 KQRP 173
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G+ + +I + + DA + + G+KPDVV Y +++ G+ +G
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D LF +M G PD +TYN+ I + + ++++++ M G + T
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 121 LLGALCE 127
++ L +
Sbjct: 601 VIDMLSD 607
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V+ F+ +I VKE + +A + +M GI PD + YT ++ G E
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +++ D M+ G P++ T+N+ ING CK N++D+ +++ M G + VT NT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ CE G L+ AK + +EM + V N+ TY+I+LDGL E +A + E++ K
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ II MC +++A +L + K PG + + ++
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G ++ + +I R D +L M + I P+VV +++++ V EG +
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+EL EM+ G+ PD TY I+G CK+N +D+A Q+VD M+ GC PN+ T N L+
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+A + + ++M L+GV + TY ++ G ++ A L +EM+ + P
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
T+ ++ +C G +ALE+ +KI
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 118/225 (52%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + F+ +I L E R +AL ++++M + G KPD++ +++G+ G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ L D+M+ G P+ TY +N +CK + A++++ M + K + V + ++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A + EM +KG+ N+ TY I++ G + + LL +M+K+
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I ++G + EA EL K+++ + AP + +L+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + ++ + K + A+ +L +M++ IK D V Y+I++ G+ G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF+EM + G+ ++ TYN+ I G C + D+ +++ MIK PNVVT +
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + + G L +A+ + KEM +G+ + TY ++DG + + +A+ +++ M+ K
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I C+ I++ LEL +K+ + + L+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +T +I KE A +++ M G P++ + I+++G
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
ELF +M + G++ D TYN I G C+ K++ A ++ M+ PN+VT LL
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G+ KA + +++ +EL++ Y I++ G+ +++ +A L + K P
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I +C+KG ++EA L +K+ AP + L+
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 103/200 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + N+M+ GI +++ Y I++ G G + +L +M+ + P+V T++V I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ K+ K+ EA ++ MI G P+ +T +L+ C+ L KA ++ M KG +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ T+ I+++G I + L +M + + T++ +I C+ G +N A EL
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 208 MKKIVAKSFAPGARAWEALL 227
+++V++ P ++ LL
Sbjct: 461 FQEMVSRKVPPNIVTYKILL 480
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +I K R D L + +M G+ D V Y ++ G G EL
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM+ + P++ TY + ++GLC + ++A++I + + K + ++ N ++ +C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
A + A + + LKGV+ + TY IM+ GL K + EA LL +M + P T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ +I G ++++L++++ F+ A
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+DF+ + + K ++ L + QM+ GI ++ +I+++
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+++ LG P+ T++ INGLC + +V EA+++VD M+++G KP+++T NTL+ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G ++A ++ +M G + N TY +L+ + + A LL +M ++ +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ II +C+ G ++ A L ++ K + L+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + +M + P++V Y I+L G+ G+ K E+F+++ + D+ YN+ I+
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G+C +KVD+A + S+ G KP V T N ++G LC+ G LS+A+ + ++M G
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FYPRSSTFDNII 192
+ TY I++ +G + ++ L+EE LK+C F +ST +I
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEE-LKRCGFSVDASTIKMVI 620
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 113/223 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
F + + + +R + + + DA+ + M P V+ ++ + S I Y +
Sbjct: 48 AFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 107
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +M + G+ ++YT ++ IN C+ K+ A + +IKLG +PN +T +TL+
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G +S+A ++ M G + +L T +++GL + EA LL+++M++ P
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T+ ++ MC+ G A+EL++K+ ++ A + ++
Sbjct: 228 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + ++ L AL I ++++ ++ D+ Y I++ G+ +L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F + + G+ P V TYN+ I GLCK+ + EA + M + G P+ T N L+ A
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
GD +K+ +++E+ G ++ T ++++D L
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + +IR L R DA +L+ M + I P+VV ++ ++ V EG
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ ++L+DEM+ + PD++TY+ ING C +++DEA + + MI C PNVVT NT
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + + + +EM +G+ N TY ++ GL + A + ++M+
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++ +C+ G + +AL + + + P + ++
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ + ++ +R +A+ +++QM +P+ V + ++ G+
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+ G PD++TY +NGLCK+ +D A+ ++ M K + +VV T
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ ALC +++ A + EM KG+ N+ TY ++ L +AS LL +M+++
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I ++G + EA +L +++ +S P + +L+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 116/226 (51%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I+ K +R + + + +M Q G+ + V Y ++ G+ GD ++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G+ PD+ TY++ ++GLCK K+++A+ + + + K +P++ T N ++ +C+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ N+ Y M+ G K EA L EM + P S T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 231
++ +I + G + EL+K++ + F A + +LH G
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 110/222 (49%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
+ P + F +I L + +A+ ++++M G +PD+ Y V++G+ GD
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L +M + DV Y I+ LC V++A+ + M G +PNVVT N+L+ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C G S A ++ +M + + N+ T+ ++D V + ++ EA L +EM+K+ P
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++I C ++EA + + +++K P + L+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 102/184 (55%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + +M Q P +V + +LS I + + L + M L + D+Y+YN+ I
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+++++ A+ ++ M+KLG +P++VT ++LL C +S+A ++ +M + +
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N T+ ++ GL + EA L++ M+ + P T+ ++ +C++G I+ AL L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 208 MKKI 211
+KK+
Sbjct: 243 LKKM 246
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + + +I+ L + A I +M DG+ PD++ Y+I+L G+ G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +F+ + + PD+YTYN+ I G+CK KV++ + S+ G KPNV+ T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G +A + +EM G N TY ++ + + ++ L++EM
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM 208
F +ST +I + L LE++
Sbjct: 601 FVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +++F ++ + K + + + +M+ I D+ Y I+++ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG PD+ T + +NG C ++ EA+ +VD M + +PN VT NTL+ L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
S+A ++ M +G + +L TY +++GL + +I A LL++M K
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ II +C +N+AL L ++ K P + +L+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 62 VKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+KLD+ LF EM+ +P + +N ++ + K NK D I + + M L ++ +
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N L+ C L A V+ +M G E ++ T +L+G I EA L+++M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ P + TF+ +I + +EA+ L+ ++VA+ P
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP 218
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P FT +I L + +A+ +++QM Q G +PD+V Y V++G+ GD
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L ++M + +V +N I+ LCK V+ A+ + M G +PNVVT N+
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G S A ++ M K + N+ T+ ++D + ++ EA L EEM+++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T++ +I C ++EA ++ K +V+K P + + L+
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 120/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ + ++ +R DA+ +++QM + G KPD +T ++ G+
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D+M+ G PD+ TY +NGLCK+ +D A+ +++ M K NVV NT
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +LC+ + A + EM KG+ N+ TY +++ L +AS LL ML+K
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I ++G + EA +L ++++ +S P + L+
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG + ++ I + + AL +L +M + G +PD+V + +L+G
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L D+M+ +G PD +T+ I+GL NK EA+ +VD M++ GC+P++VT T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ GD+ A ++ +M ++ N+ + ++D L + A L EM K
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++++I C+C G ++A L+ ++ K P + AL+
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + +I L R DA +L+ M + I P+VV + ++ EG
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ ++L +EM+ + PD TYN+ ING C N++DEA Q+ M+ C PN+ T NT
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ + + +EM +G+ N TY ++ G + A ++ ++M+
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMK 209
T+ ++ +C G ++ AL + K
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFK 492
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I KE + ++A + +M Q I PD + Y ++++G + ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M+ +P++ TYN ING CK +V++ +++ M + G N VT T++ +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AGD A+ V K+M V ++ TY I+L GL ++ A ++ + + K
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 188 FDNIICCMCQKGLINEALELM 208
++ +I MC+ G + EA +L
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLF 526
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 106/186 (56%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + M + P +V + +LS + + + L ++M LG+ D+YTY+++I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+++++ A+ ++ M+KLG +P++VT ++LL C + +S A ++ +M G +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ T+ ++ GL + EA L+++M+++ P T+ ++ +C++G I+ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 208 MKKIVA 213
+ K+ A
Sbjct: 246 LNKMEA 251
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I K +R D + + +M Q G+ + V YT ++ G GD +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA---------------IQIVDSMIK---- 108
F +M+ + D+ TY++ ++GLC K+D A I I ++MI+
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 109 -------------LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
L KP+VVT NT++ LC L +A + ++M G N TY
Sbjct: 516 AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ + + ++ L++EM F +ST +++ M G ++++
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 59 GDYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
D +K+D+ LF +M+ P + +N ++ + K NK + I + + M LG ++
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
T + + C LS A V+ +M G E ++ T +L+G I +A L+++
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
M++ + P + TF +I + +EA+ L+ ++V + P
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
KVD+A+ + M+K P++V N LL A+ + + ++M G+ +L+TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
I ++ ++++ A +L +M+K + P T +++ C I++A+ L+ ++V
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 215 SFAPGARAWEALL 227
+ P + L+
Sbjct: 183 GYKPDTFTFTTLI 195
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 118/220 (53%), Gaps = 1/220 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +T +I+ L ER +AL ++ +M++ GIKP++ YT+++ + ++ + K EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ML GL+P+V TYN ING CK+ +++A+ +V+ M PN T N L+ C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ ++ KA GV+ +M + V ++ TY ++DG A LL M + P T
Sbjct: 441 S-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ + EA +L + K P + AL+
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 117/221 (52%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP + + M+ K +A ++++ + G+ PD YT ++ G D +
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+F+EM + G + Y I+GLC ++DEA+ + M C P V T L+ +LC
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ S+A ++KEM G++ N+HTY +++D L + + +A LL +ML+K P
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C++G+I +A+++++ + ++ +P R + L+
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
RKL P + ++I+ K A+ +LN+M + + PDVV Y ++ G G++
Sbjct: 422 RKLS--PNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
L M GL+PD +TY I+ LCK +V+EA + DS+ + G PNVV L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C+AG + +A ++++M K N T+ ++ GL ++ EA+LL E+M+K
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ST +I + + G + A +++++ P A + +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P +T MI L K +R +A + + ++Q G+ P+VV YT ++ G G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++ML +P+ T+N I+GLC K+ EA + + M+K+G +P V T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L + GD A ++M G + + HTY + + + +A ++ +M +
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
P T+ ++I G N A +++K++ P + +L+ H
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 28 DALYILN---QMKQD-----GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
DALY+L+ +M +D K + CY +L+ + G ++ +++ EML + P+
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
+YTYN +NG CK V+EA Q V +++ G P+ T +L+ C+ DL A V
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
EM LKG N Y ++ GL I EA L +M +P T+ +I +C
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 200 LINEALELMKKIVAKSFAPGARAWEALL 227
+EAL L+K++ P + L+
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLI 365
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + A +L+ M G+ PD YT ++ + + +L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD + G+ P+V Y I+G CK KVDEA +++ M+ C PN +T N L+ LC
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L +A + ++M G++ + T I++ L+ + A ++ML P + T
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFA 242
+ I C++G + +A ++M K+ +P + +L+ G DL +T FA
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG-DL--GQTNFA 691
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +T +I + + A + N+M G + + V YT ++ G+ +
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF +M P V TY V I LC + EA+ +V M + G KPN+ T L+ +
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC KA+ ++ +M KG+ N+ TY +++G + I +A ++E M + P
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T++ +I C K +++A+ ++ K++ + P + +L+
Sbjct: 428 TRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 25/225 (11%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +I L + + +A + +M + G++P V TI++ ++ +GD+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +ML G PD +TY +I C++ ++ +A ++ M + G P++ T ++L+ +
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV----GKAEIGEASLLLEEMLKKCFYP 183
G + A V+K M G E + HT+ ++ L+ GK + E L C
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL--------CAMS 736
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
FD ++ EL++K+V S P A+++E L+L
Sbjct: 737 NMMEFDTVV-------------ELLEKMVEHSVTPNAKSYEKLIL 768
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMD------------------ALYILNQMKQDGIK 42
MR G P F +I+ L++ + G + +L +M + +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
P+ Y ++ GI G+ +++FD M G+ P +N ++ CK K +EA +
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+VD MI +G P + +C L+ L + G+ + V + + G + ++I++DG V
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG-V 876
Query: 162 GKAEIGEASLLLEEMLKK 179
GK + EA L +++K
Sbjct: 877 GKQGLVEAFYELFNVMEK 894
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +T I+ +E R +DA ++ +M+++G+ PD+ Y+ ++ G GD +
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQT 688
Query: 65 DELFD---EMLVLGLIPDVYTYNVYINGLCKQN------------------KVDEAIQIV 103
+ FD M G P +T+ I L + + D ++++
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVG 162
+ M++ PN + L+ +CE G+L A+ V M +G+ + + +L
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
+ EA+ ++++M+ P+ + +IC + +KG + + ++ + A
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 223 WEALL 227
W+ ++
Sbjct: 869 WKIII 873
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 113/218 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V ++ +I L R DA +L+ M + I P+VV + ++ EG
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ ++LFDEM+ + P++ TYN ING C +++DEA QI M+ C P+VVT NT
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + + ++M +G+ N TY ++ G ++ A ++ ++M+
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+P T++ ++ +C+ G + +A+ + + + P
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 121/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ ++ R +A+ +++QM + G +PD V +T ++ G+
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L + M+V G PD+ TY INGLCK+ + D A+ +++ M K + +VV +T
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +LC+ + A + EM KG+ ++ TY ++ L +AS LL +ML++
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+++I ++G + EA +L +++ +S P + +L+
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I KE + ++A + ++M Q I P++V Y +++G + ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M+ +PDV TYN ING CK KV + +++ M + G N VT TL+ +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
A D A+ V K+M GV N+ TY +LDGL ++ +A ++ E + K P T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ + MC+ G + + +L + K P A+ ++
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P + FT ++ L + + +A+ ++ +M G +PD+V Y V++G+ G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L ++M + DV Y+ I+ LCK VD+A+ + M G +P+V T ++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G S A ++ +M + + N+ T+ ++D + ++ EA L +EM+++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++++I C ++EA ++ +V+K P + L+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG + + MI L + + AL IL +M + G P +V +L+G
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D+M+ +G PD T+ ++GL + NK EA+ +V+ M+ GC+P++VT
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ G+ A ++ +M +E ++ Y ++D L + +A L EM K
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C+C G ++A L+ ++ + P + +L+
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 113/226 (50%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K ++ +D + + M + G+ + V YT ++ G D +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G+ P++ TYN ++GLCK K+++A+ + + + K +P++ T N + +C+
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ ++ Y M+ G K EA L +M + P S T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 231
++ +I + G + EL+K++ + FA A + + +LH G
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 103/184 (55%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ + +M + P +V ++ +LS I + + ++M +LG+ ++YTYN+ I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N LC+++++ A+ I+ M+KLG P++VT N+LL C +S+A ++ +M G +
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ T+ ++ GL + EA L+E M+ K P T+ +I +C++G + AL L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 208 MKKI 211
+ K+
Sbjct: 228 LNKM 231
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ ++ +I L K DAL + +M GI+PDV Y+ ++S + G + L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+ML + P+V T+N I+ K+ K+ EA ++ D MI+ PN+VT N+L+ C
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
L +A+ + M K ++ TY +++G ++ + L +M ++ + T+
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I Q + A + K++V+ P + LL
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +++F+ ++ + K ++ + +M+ G+ ++ Y I+++ + +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG P + T N +NG C N++ EA+ +VD M+++G +P+ VT TL+ L +
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
S+A +++ M +KG + +L TY +++GL + E A LL +M K
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C+ +++AL L ++ K P + +L+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + +T +I + +A + QM DG+ P+++ Y +L G+ G
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +F+ + + PD+YTYN+ G+CK KV++ + S+ G KP+V+ NT
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ G +A + +M G + TY ++ + + ++ L++EM + C
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSC 584
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ ++ M G +++
Sbjct: 585 RFAGDASTYGLVTDMLHDGRLDKGF 609
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
++KLDE LF EM+ P + ++ ++ + K K D I + M LG N+ T
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N ++ LC LS A ++ +M G ++ T +L+G I EA L+++M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + P + TF ++ + Q +EA+ L++++V K P + A++
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ ++ +I L R DA +L+ M + I PDV ++ ++ V EG
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ ++L+DEM+ + P + TY+ ING C +++DEA Q+ + M+ C P+VVT NT
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ + + V +EM +G+ N TY I++ GL + A + +EM+
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ +C+ G + +A+ + + + P + ++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 118/223 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ P + F +I L + +A+ ++++M G +PD+V Y +V++G+ GD
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L ++M L P V YN I+GLCK +D+A+ + M G +PNVVT ++L+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G S A ++ +M + + ++ T+ ++D V + ++ EA L +EM+K+ P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++I C ++EA ++ + +V+K P + L+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F+ +I VKE + ++A + ++M + I P +V Y+ +++G + ++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ PDV TYN I G CK +V+E +++ M + G N VT N L+ L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AGD A+ + KEM GV N+ TY +LDGL ++ +A ++ E + + P T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I MC+ G + + +L + K P A+ ++
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ + ++ +R +A+ +++QM G +P+ V + ++ G+
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+ G PD+ TY V +NGLCK+ D A +++ M + +P V+ NT
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ + A + KEM KG+ N+ TY ++ L +AS LL +M+++
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I ++G + EA +L ++V +S P + +L+
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG ++ +I + + AL +L +M + G +P++V + +L+G
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D+M V G P+ T+N I+GL NK EA+ ++D M+ GC+P++VT
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ GD A ++ +M +E + Y ++DGL + +A L +EM K
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C+C G ++A L+ ++ + P + AL+
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I+ K +R + + + +M Q G+ + V Y I++ G+ GD E+
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM+ G+ P++ TYN ++GLCK K+++A+ + + + + +P + T N ++ +C+
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ ++ Y M+ G K EA L +EM + P S
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 231
++ +I + G + EL+K++ + FA A + +LH G
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 108/200 (54%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + +M + P ++ ++ +LS I + + L ++M LG+ + YTY++ I
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+++++ A+ ++ M+KLG +PN+VT ++LL C + +S+A ++ +M + G +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N T+ ++ GL + EA L++ M+ K P T+ ++ +C++G + A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ K+ PG + ++
Sbjct: 244 LNKMEQGKLEPGVLIYNTII 263
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +M + ++ L K + A+ + +++ ++P + Y I++ G+ G
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF + + G+ PDV YN I+G C++ +EA + M + G PN NTL+ A
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 125 LCEAGDLSKAKGVMKEM 141
GD + ++KEM
Sbjct: 581 RLRDGDREASAELIKEM 597
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
Y + NGL + K+D+A+ + M+K P+++ + LL A+ + + ++
Sbjct: 48 YREKLSRNGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 106
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
M G+ N +TY I+++ ++++ A +L +M+K + P T +++ C
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 201 INEALELMKKIVAKSFAPGARAWEALL 227
I+EA+ L+ ++ + P + L+
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLI 193
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P V+ ++ +I L K R DA L++M I P+V+ ++ ++ G
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGK 133
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT--- 117
K+D ++ M+ + + P+V+TY+ I GLC N+VDEAI+++D MI GC PNVVT
Sbjct: 134 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 193
Query: 118 --------------------------------CNTLLGALCEAGDLSKAKGVMKEMGLKG 145
CNTL+ +AG + A GV M G
Sbjct: 194 LANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNG 253
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N+ +Y I+L GL E+ +A E M K T+ +I MC+ ++ EA
Sbjct: 254 LIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAY 313
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+L K+ K P +A+ ++
Sbjct: 314 DLFYKLKFKRVEPDFKAYTIMI 335
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG P ++ + ++ DA+Y+ QM++ GIK DVV TI++ +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V E+ M G+ P+V TY+ I GLCK ++ +A + + M PNV+T +
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A + G LSK V K M ++ N+ TY ++ GL + EA +L+ M+ K
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ + + +++ ++L+ + + A + L+
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M + GI+PD+V + +++G + +M +G+ DV + I+ LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
V A++++ M G PNVVT ++L+ LC++G L+ A+ + EM K + N+ T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
++D + ++ + + + M++ P T+ ++I +C ++EA++++ +++K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 215 SFAPGARAWEAL 226
P + L
Sbjct: 183 GCTPNVVTYSTL 194
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%)
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M+ LG+ PD+ T + +NG C N + +A+ + M K+G K +VV L+ LC+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ A V+K M +G+ N+ TY ++ GL + +A L EM K P TF
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I ++G +++ + K ++ S P + +L+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 160
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ ++ + K R D + +L+ M Q G+ + V ++ G G
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+F M GLIP++ +YN+ + GL +V++A+ + M K +++T ++
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+C+A + +A + ++ K VE + Y IM+ AE+ A + E FY +
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI------AELNRAGMRTEADALNRFYQK 356
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 123/227 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ ++ +I L R DA +L+ M + I P++V ++ ++ V +G
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
VK ++L++EM+ + P+++TY+ ING C +++ EA Q+++ MI+ C PNVVT NT
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + K + +EM +G+ N TY ++ G + A ++ ++M+
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T++ ++ +C+ G + +A+ + + + + P + ++
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P + FT +I L + +A+ ++++M Q G +PD+V Y V++G+ GD
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L ++M + +V Y+ I+ LCK D+A+ + M G +PNV+T ++
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G S A ++ +M + + NL T+ ++D V K ++ +A L EEM+K+
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C + EA ++++ ++ K P + L+
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ ++ R DA+ +++QM + G KPD V +T ++ G+
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+ G PD+ TY +NGLCK+ D A+ +++ M + NVV +T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +LC+ A + EM KGV N+ TY ++ L +AS LL +M+++
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I +KG + +A +L ++++ +S P + +L+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M + G +PD+V +L+G L D+M+ +G PD T+ I+GL N
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K EA+ ++D M++ GC+P++VT ++ LC+ GD A ++ +M +E N+ Y
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
++D L +A L EM K P T+ ++I C+C G ++A L+ ++ +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 215 SFAPGARAWEALL 227
P + AL+
Sbjct: 318 KINPNLVTFSALI 330
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 110/202 (54%)
Query: 12 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
D+ +++R + + DA+ + M Q P ++ ++ +LS I + + ++M
Sbjct: 45 DYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 104
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
+LG+ ++YTYN+ IN C+ +++ A+ ++ M+KLG +P++VT N+LL C +
Sbjct: 105 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
S A ++ +M G + + T+ ++ GL + EA L++ M+++ P T+ +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 192 ICCMCQKGLINEALELMKKIVA 213
+ +C++G + AL L+ K+ A
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEA 246
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P + ++ +I +R +A +L M + P+VV Y +++G
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K ELF EM GL+ + TY I+G + D A + M+ +G PN++T N
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIG 167
LL LC+ G L+KA V + + +E +++TY IM++G+ GK ++G
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 122/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P + FT +I L + +A+ ++++M Q G +P++V Y +V++G+ GD
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L ++M + DV +N I+ LCK VD+A+ + M G +PNVVT ++
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G S A ++ +M K + NL T+ ++D V + + EA L ++M+K+
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++++I C +++A ++ + +V+K P + L+
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ + ++ +R DA+ +++QM + G +PD + +T ++ G+
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+ G P++ TY V +NGLCK+ +D A +++ M + +VV NT
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +LC+ + A + KEM KG+ N+ TY ++ L +AS LL +M++K
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I ++G EA +L ++ +S P + +L+
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 110/207 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ ++ +I L R DA +L+ M + I P++V + ++ V EG
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+V+ ++L D+M+ + PD++TYN ING C +++D+A Q+ + M+ C P++ T NT
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++ + + +EM +G+ + TY ++ GL + A + ++M+
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
P T+ ++ +C G + +ALE+
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEV 417
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I+ K +R D + +M G+ D V YT ++ G+ +GD ++
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G+ PD+ TY++ ++GLC K+++A+++ D M K K ++ T++ +C+
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ N+ TY M+ GL K + EA LL++M + P S T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARA--WEALLLHSG 231
++ +I + G + EL++++ + F A A +LH G
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F +I VKE + ++A + + M + I PD+ Y +++G K ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ PD+ TYN I G CK +V++ ++ M G + VT TL+ L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD A+ V K+M GV ++ TY I+LDGL ++ +A + + M K
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I MC+ G +++ +L + K P + ++
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + +T +I+ L + +A + QM DG+ PD++ Y+I+L G+ G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+FD M + D+Y Y I G+CK KVD+ + S+ G KPNVVT NT
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC L +A ++K+M G + TY ++ + + ++ L+ EM + C
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-RSC 529
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ ++ M G ++++
Sbjct: 530 RFVGDASTIGLVANMLHDGRLDKSF 554
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 94/171 (54%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P + + +LS I + + L ++M LG+ ++YTYN+ IN C+++++ A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
+ M+KLG +P++VT ++LL C +S A ++ +M G + T+ ++ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+ EA L++ M+++ P T+ ++ +C++G I+ A L+ K+ A
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%)
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
M+K P++ N LL A+ + + ++M G+ NL+TY I+++ +++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
I A LL +M+K + P T +++ C I++A+ L+ ++V + P +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 226 LL 227
L+
Sbjct: 121 LI 122
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 122/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G+ P + FT +I L + +A+ ++++M Q G +P++V Y +V++G+ GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L ++M + DV +N I+ LCK VD+A+ + M G +PNVVT ++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G S A ++ +M K + NL T+ ++D V + + EA L ++M+K+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+++++ C +++A ++ + +V+K P + L+
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 112/207 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ ++ +I L R DA +L+ M + I P++V + ++ V EG
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+V+ ++L+D+M+ + PD++TYN +NG C +++D+A Q+ + M+ C P+VVT NT
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++ + + +EM +G+ + TY ++ GL + A + ++M+
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
P T+ ++ +C G + +ALE+
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEV 492
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ + ++ +R DA+ +++QM + G +PD + +T ++ G+
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+ G P++ TY V +NGLCK+ D A+ +++ M + +VV NT
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +LC+ + A + KEM KG+ N+ TY ++ L +AS LL +M++K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I ++G EA +L ++ +S P + +L+
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 119/226 (52%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I+ K +R D + +M G+ D V YT ++ G+ +GD ++
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G+ PD+ TY++ ++GLC K+++A+++ D M K K ++ T++ +C+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ N+ TY M+ GL K + EA LL++M + P S T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARA--WEALLLHSG 231
++ +I + G + EL++++ + F A A +LH G
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F +I VKE + ++A + + M + I PD+ Y +++G K ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ PDV TYN I G CK +V++ ++ M G + VT TL+ L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD A+ V K+M GV ++ TY I+LDGL ++ +A + + M K
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I MC+ G +++ +L + K P + ++
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + +T +I+ L + +A + QM DG+ PD++ Y+I+L G+ G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+FD M + D+Y Y I G+CK KVD+ + S+ G KPNVVT NT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC L +A ++K+M G N TY ++ + + ++ L+ EM + C
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM-RSC 604
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ ++ M G ++++
Sbjct: 605 RFVGDASTIGLVANMLHDGRLDKSF 629
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P + + ++ +R A + M PDVV Y ++ G
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
ELF EM GL+ D TY I GL D A ++ M+ G P+++T +
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL LC G L KA V M ++L+++ Y M++G+ ++ + L + K
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I +C K L+ EA L+KK+ P + + L+
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 111/209 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
F G D+ +++R + + + DA+ + M + P +V + +LS I + +
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L ++M L ++ +YTYN+ IN C+++++ A+ ++ M+KLG +P++VT ++LL
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C +S A ++ +M G + T+ ++ GL + EA L++ M+++ P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVA 213
T+ ++ +C++G + AL L+ K+ A
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
NGL K+D+AI + M+K P++V N LL A+ + + ++M +
Sbjct: 59 NGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 117
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L+TY I+++ +++I A LL +M+K + P T +++ C I++A+ L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ ++V + P + L+
Sbjct: 178 VDQMVEMGYRPDTITFTTLI 197
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P + T +I K+ + ++A M GI D YT++++G+
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+E+F EM G+ PDV++Y V ING K + +A I D M++ G PNV+ N
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LLG C +G++ KAK ++ EM +KG+ N TY ++DG ++ EA L +EM K
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM---KKIVAKSFAP 218
P S + ++ C+ + A+ + KK A S AP
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + +I L K +R +A L +M ++G+KP+ Y +SG + +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 YVKLDELFDEMLVLGLIP-----------------------------------DVYTYNV 85
+ D+ EM G++P D TY V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+NGL K +KVD+A +I M G P+V + L+ + G++ KA + EM +G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N+ Y ++L G EI +A LL+EM K +P + T+ II C+ G + EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L ++ K P + + L+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLV 739
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +I+ ++ R DA+ +L +MK+ GI PD+ CY ++ G+ +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM+ GL P+ +TY +I+G + ++ A + V M + G PN V C L+ C+
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + +A + M +G+ + TY ++++GL ++ +A + EM K P +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I + G + +A + ++V + P + LL
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 40/250 (16%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + ++ + A +L++M G+ P+ V Y ++ G GD +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC------------- 111
LFDEM + GL+PD + Y ++G C+ N V+ AI I + K GC
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINW 775
Query: 112 --------------------------KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
KPN VT N ++ LC+ G+L AK + +M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ + TY +L+G E + +E + P + II ++G+ +AL
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 206 ELMKKIVAKS 215
L+ ++ AK+
Sbjct: 896 VLVDQMFAKN 905
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG ++ +I L+K A ++++M GI Y + + EG
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K LFD M+ GLIP Y I G C++ V + +++ M K + T T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +C +GDL A ++KEM G N+ Y ++ + + G+A +L+EM ++
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++++I + + ++EA + ++V P A + A +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 27 MDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
+D Y I+ +M G +P+VV YT ++ + + + EM G+ PD++ YN
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I GL K ++DEA + M++ G KPN T + EA + + A +KEM G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 146 VELNLHTYRIMLDGLVG----KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
V N +++ GL+ K ++ EA M+ + + T+ ++ + + +
Sbjct: 553 VLPN----KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
++A E+ +++ K AP ++ L+
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLI 634
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +I +E+ +L +MK+ I Y V+ G+ + GD
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ EM+ G P+V Y I + ++ +A++++ M + G P++ N+L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L +A + +A+ + EM G++ N TY + G + +E A ++EM + P
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I C+KG + EA + +V + A+ + L+
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 98/256 (38%), Gaps = 38/256 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P V + +I K A I ++M ++G+ P+V+ Y ++L G G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K EL DEM V GL P+ TY I+G CK + EA ++ D M G P+ T
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 121 LLGALCEAGDLSKA--------KGVMKEMG----------------LKGVELNLH----- 151
L+ C D+ +A KG LK LN
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 152 ---------TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
TY IM+D L + + A L +M P T+ +++ + G
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 203 EALELMKKIVAKSFAP 218
E + + +A P
Sbjct: 858 EMFPVFDEAIAAGIEP 873
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + MI +L KE A + +QM+ + P V+ YT +L+G G ++ +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-----IKLGCKPNVVTCNTLL 122
FDE + G+ PD Y+V IN K+ +A+ +VD M + GCK ++ TC LL
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 123 GALCEAGDLSKAKGVMKEM 141
+ G++ A+ VM+ M
Sbjct: 923 SGFAKVGEMEVAEKVMENM 941
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKV---------------------DEAIQIVD 104
+++ M+ ++ DV TY++ I C+ V D A+++ +
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKE 266
Query: 105 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
SMI G P T + L+ LC+ L AK ++ EM GV L+ HTY +++DGL+
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 165 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
A L+ EM+ + +D IC M ++G++ +A L ++A P A+A+
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 225 ALL 227
+L+
Sbjct: 387 SLI 389
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI----KPDVVCYTIVLSGIVAE 58
K G F +I ++ K + +LN++ KP+ V Y I++ + E
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G+ ELF +M L+P V TY +NG K + E + D I G +P+ +
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLK-----GVELNLHTYRIMLDGLVGKAEIGEASLLL 173
+ ++ A + G +KA ++ +M K G +L++ T R +L G E+ A ++
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Query: 174 EEMLKKCFYPRSSTFDNIICCMC 196
E M++ + P S+T +I C
Sbjct: 939 ENMVRLQYIPDSATVIELINESC 961
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 102/224 (45%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +I L K +R DA +L +M G+ D Y++++ G++ +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L EM+ G+ Y Y+ I + K+ +++A + D MI G P +L+
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C ++ + ++ EM + + ++ +TY ++ G+ ++ A +++EM+ P
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ +I Q +A+ ++K++ + AP + +L++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 4/201 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + M G+ P Y +++ G+ L EM LG+ D +TY++ I+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 89 GLCKQNKVDEAIQIVDSMIKLG--CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
GL K D A +V M+ G KP + C + + + G + KAK + M G+
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDC--CICVMSKEGVMEKAKALFDGMIASGL 378
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
Y +++G + + + LL EM K+ T+ ++ MC G ++ A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 207 LMKKIVAKSFAPGARAWEALL 227
++K+++A P + L+
Sbjct: 439 IVKEMIASGCRPNVVIYTTLI 459
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V ++ +I L KE + A + ++M + G+ P+ V +T ++ G G+
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E + +ML GL PD+ YN +NG CK + A IVD MI+ G +P+ +T T
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C GD+ A + KEM G+EL+ + ++ G+ + + +A L EML+
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++ C+KG +L+K++ + P + LL
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M G++PD+V Y +++G GD V + D M+ GL PD TY I+G C+
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
V+ A++I M + G + + V + L+ +C+ G + A+ ++EM G++ + TY
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+M+D K + LL+EM P T++ ++ +C+ G + A L+ ++
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 215 SFAPGARAWEALL----LHSGSDLTYSETTFAGL 244
P + LL H+ S Y + G+
Sbjct: 550 GVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGI 583
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 96/188 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + ++ K + A I++ M + G++PD + YT ++ G GD
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ EM G+ D ++ + G+CK+ +V +A + + M++ G KP+ VT ++ A
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ GD ++KEM G ++ TY ++L+GL ++ A +LL+ ML P
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 185 SSTFDNII 192
T++ ++
Sbjct: 555 DITYNTLL 562
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G +V + I+++ EG+ ++FDE+ L P V ++N ING CK +DE
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
++ M K +P+V T + L+ ALC+ + A G+ EM +G+ N + ++ G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
EI ++ML K P ++ ++ C+ G + A ++ ++ + P
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 220 ARAWEALL 227
+ L+
Sbjct: 415 KITYTTLI 422
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
E+L G +VY +N+ +N CK+ + +A ++ D + K +P VV+ NTL+ C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+L + + +M ++ TY +++ L + ++ A L +EM K+ P F
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I + G I+ E +K+++K P + L+
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 122/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ + GF P V+ +T +I K+ A + +M + G+ + YT++++G+ G
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E++++M G+ P++YTYN +N LCK + +A Q+ D M + G N+VT NT
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G LC L++A V+ +M G+ NL TY ++DG G ++G+A L ++ +
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ C+KG + A +++K++ + P + L+
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G ++ + +I L +E + +A +++QMK DGI P+++ Y ++ G G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L ++ GL P + TYN+ ++G C++ A ++V M + G KP+ VT
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + ++ KA + M G+ ++HTY +++ G K ++ EAS L + M++K
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ +I C++G AL+L+K++ K AP ++ ++
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 117/228 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + ++ L K+ R DA + ++M++ G+ ++V Y ++ G+ E
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +++ D+M G+ P++ TYN I+G C K+ +A+ + + G P++VT N
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C GD S A ++KEM +G++ + TY I++D + +A L M +
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P T+ +I C KG +NEA L K +V K+ P + ++L
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ G P ++ + ++ ++ A ++ +M++ GIKP V YTI++ +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +L M LGL+PDV+TY+V I+G C + +++EA ++ SM++ C+PN V NT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ G +A ++KEM K + N+ +YR M++ L + + EA L+E+M+
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 181 FYPRSS 186
P +S
Sbjct: 544 IDPSTS 549
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
++ N+M +G P C+ +L+ +V + + F+E ++ DVY++ + I
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIK 171
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C+ +++++ ++ + + G PNVV TL+ C+ G++ KAK + EMG G+
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N TY ++++GL + + E+M + +P T++ ++ +C+ G +A ++
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + + + L+
Sbjct: 292 DEMRERGVSCNIVTYNTLI 310
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF PG F ++ F+V N+ K + DV + I++ G G+ K
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKS 182
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL--------------- 109
+L E+ G P+V Y I+G CK+ ++++A + M KL
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 110 --------------------GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
G PN+ T N ++ LC+ G A V EM +GV N
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ TY ++ GL + ++ EA+ ++++M P T++ +I C G + +AL L +
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 210 KIVAKSFAPGARAWEALL 227
+ ++ +P + L+
Sbjct: 363 DLKSRGLSPSLVTYNILV 380
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++DFT ++ + K R + + QM+ GI P + IV+ + +
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG PD+ T+ +NG C N++++AI + D ++ +G KPNVVT TL+ LC+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L+ A + +MG G N+ TY ++ GL G+A+ LL +M+K+ P T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +I + G + EA EL ++ S P + +L+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 97/176 (55%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
L +M + G +PD+V +T +L+G LFD++L +G P+V TY I LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K ++ A+++ + M G +PNVVT N L+ LCE G A ++++M + +E N+
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
T+ ++D V ++ EA L M++ YP T+ ++I +C GL++EA ++
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++ L + R DA ++L M + I+P+V+ +T ++ V G ++ EL
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++ M+ + + PDV+TY INGLC +DEA Q+ M + GC PN V TL+ C+
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGKAEIGEASLLLEEMLKKCFYPRS 185
+ + + EM KGV N TY +++ G LVG+ ++ + + +M + P
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE--VFNQMSSRRAPPDI 398
Query: 186 STFDNIICCMCQKGLINEAL---ELMKK 210
T++ ++ +C G + +AL E M+K
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +T +I K +R D + I +M Q G+ + + YT+++ G G
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F++M PD+ TYNV ++GLC KV++A+ I + M K N+VT
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +C+ G + A + + KG++ N+ TY M+ G + I EA L ++M +
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 181 FYPRSSTF 188
F P S +
Sbjct: 499 FLPNESVY 506
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ FT +I VK + M+A + N M Q + PDV Y +++G+ G + ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M G P+ Y I+G CK +V++ ++I M + G N +T L+ C
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK--------- 178
G A+ V +M + ++ TY ++LDGL ++ +A ++ E M K
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 179 --------------------------KCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K P T+ +I C++GLI+EA L KK+
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 213 AKSFAPGARAWE 224
F P ++
Sbjct: 496 EDGFLPNESVYK 507
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + +I L E + A ++ ++++ GI D V Y I+++G GD
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L DEM+ G+ P +TY I LC++NK EA ++ + ++ G KP++V NT
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G++ +A ++KEM + + + TY ++ GL G+ + EA L+ EM ++
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +++ +I +KG A + ++++ F P + ALL
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 3/227 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P + + ++ ++ E R + +L +MK+ G+ PD V Y I++ G GD
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
DEM+ G++P YTYN I+GL +NK++ A ++ + + G + VT N
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ GD KA + EM G++ TY ++ L K + EA L E+++ K
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + ++ C G ++ A L+K++ S P + L+
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +T +I L ++ + +A + ++ G+KPD+V ++ G A G+ +
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L EM ++ + PD TYN + GLC + K +EA +++ M + G KP+ ++ NTL+
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ GD A V EM G L TY +L GL E A LL EM + P
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Query: 185 SSTFDNIICCM 195
S+F ++I M
Sbjct: 607 DSSFCSVIEAM 617
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G P T N + L + N+++ A M ++ K NV T N ++ LC+ G L KA
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
KG + M + G++ + TY ++ G + I A L++ EM K F P T++ I+
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 195 MCQKGLINEALELMKKI 211
MC +G +E L MK+I
Sbjct: 305 MCNEGRASEVLREMKEI 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 32/259 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ GF P ++ L + R +A M + IK +V + I+++ + EG
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K M V G+ P + TYN + G + +++ A I+ M G +P++ T N
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 121 LLGALCEAGDLSKAKGVMKEMGL--------------------------------KGVEL 148
+L +C G S+ MKE+GL +G+
Sbjct: 301 ILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+TY ++ GL + +I A +L+ E+ +K S T++ +I CQ G +A L
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 209 KKIVAKSFAPGARAWEALL 227
+++ P + +L+
Sbjct: 421 DEMMTDGIQPTQFTYTSLI 439
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + + ++R L E + +A ++ +MK+ GIKPD + Y ++SG +GD
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ DEML LG P + TYN + GL K + + A +++ M G PN
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V+ F+ +I VKE + +A + +M Q GI PD V YT ++ G E
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + + D M+ G P++ T+N+ ING CK N +D+ +++ M G + VT NT
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ CE G L AK + +EM + V ++ +Y+I+LDGL E +A + E++ K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ II MC +++A +L + K P + + ++
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF ++ +T +IR R D +L M + I PDVV ++ ++ V EG +
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+EL EM+ G+ PD TY I+G CK+N++D+A ++D M+ GC PN+ T N L+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLKKCFY 182
C+A + + ++M L+GV + TY ++ G +GK E+ A L +EM+ +
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV--AKELFQEMVSRRVR 454
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKI 211
P ++ ++ +C G +ALE+ +KI
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P + + +++ + K + A+ +L +M++ IK D V Y+I++ G+ +G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF+EM + G D+ Y I G C + D+ +++ MIK P+VV +
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G L +A+ + KEM +G+ + TY ++DG + ++ +A+ +L+ M+ K
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I C+ LI++ LEL +K+ + + L+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 101/188 (53%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G +PD V ++ +++G+ EG + EL D M+ +G P + T N +NGLC KV +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+ ++D M++ G +PN VT +L +C++G + A ++++M + ++L+ Y I++DG
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L + A L EM K F + +I C G ++ +L++ ++ + P
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 220 ARAWEALL 227
A+ AL+
Sbjct: 317 VVAFSALI 324
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + F+ +I L E R +AL ++++M + G KP ++ +++G+ G
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
L D M+ G P+ TY + +CK + A++++ M + K + V + ++
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A + EM +KG + ++ Y ++ G + + LL +M+K+
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P F +I C ++G + EA EL K+++ + +P + +L+
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + +M ++PD+V Y I+L G+ G+ K E+F+++ + D+ YN+ I+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G+C +KVD+A + S+ G KP+V T N ++G LC+ G LS+A + ++M G
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
N TY I++ +G+ + +++ L+EE +K+C + ++ ++ M G + ++
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEE-IKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + F +I K D L + +M G+ D V Y ++ G G
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
ELF EM+ + PD+ +Y + ++GLC + ++A++I + + K + ++ N ++
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+C A + A + + LKGV+ ++ TY IM+ GL K + EA LL +M + P
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
T++ +I +G ++ +L+++I F+ A
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ ++ L + DA+ ++++M + G +P+ V Y VL + G
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL +M + D Y++ I+GLCK +D A + + M G K +++ T
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C AG ++++M + + ++ + ++D V + ++ EA L +EM+++
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+ ++I C++ +++A ++ +V+K P R + L+
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 115/219 (52%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
G + + + +R + + + DA+ + +M + +P ++ ++ + S + Y + +L
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+M + G+ ++YT ++ IN C+ K+ A + +IKLG +P+ VT +TL+ LC
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G +S+A ++ M G + L T +++GL ++ +A LL++ M++ F P T+
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ MC+ G A+EL++K+ + A + ++
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 6/212 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++DF+ + + + ++ L + QM+ GI ++ +I+++ KL
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCR---CRKLSLA 126
Query: 68 FDEM---LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F M + LG PD T++ INGLC + +V EA+++VD M+++G KP ++T N L+
Sbjct: 127 FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G +S A ++ M G + N TY +L + + A LL +M ++
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ + II +C+ G ++ A L ++ K F
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + ++ L AL I ++++ ++ D+ Y I++ G+ +L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F + + G+ PDV TYN+ I GLCK+ + EA + M + G PN T N L+ A
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
GD +K+ +++E+ G ++ T ++++D L
Sbjct: 575 EGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 91/150 (60%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+++G P V+ +T +I L + Y L++M + G +PDVVCYT++++G V G+
Sbjct: 315 MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+F EM V G +P+V+TYN I GLC + EA ++ M GC PN V +T
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
L+ L +AG LS+A+ V++EM KG ++L
Sbjct: 435 LVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%)
Query: 31 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
++ QM +DG PDV+ Y I+L G + D LFDEM G PD YTYN+ ++ L
Sbjct: 240 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
K NK A+ ++ M ++G P+V+ TL+ L AG+L K + EM G ++
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
Y +M+ G V E+ +A + EM K P T++++I +C G EA L+K+
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 211 IVAKSFAPGARAWEALL 227
+ ++ P + L+
Sbjct: 420 MESRGCNPNFVVYSTLV 436
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 126/246 (51%), Gaps = 3/246 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I+ L + ++A + N+M + G+ P+V + I+++G+ G
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D L M+ G PD++T+N+ I+G Q K++ A++I+D M+ G P+V T N+LL
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ K M KG NL T+ I+L+ L ++ EA LLEEM K P
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD---LTYSETTF 241
+ TF +I C+ G ++ A L +K+ + +++H+ ++ +T +E F
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 242 AGLFNQ 247
+ ++
Sbjct: 626 QEMVDR 631
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE-- 58
MR G P V FT ++ K R AL +LN M G + +VV Y V+ G E
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 59 ---------------------------------GDYVKLDELFDEMLVLGLIPDVYTYNV 85
GD + ++L D+++ G++P+++TYN+
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+I GLC++ ++D A+++V +I+ G KP+V+T N L+ LC+ +A+ + +M +G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+E + +TY ++ G + A ++ + + F P T+ ++I +C +G N AL
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L + + K P + L+
Sbjct: 377 ALFNEALGKGIKPNVILYNTLI 398
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 3/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V F ++ L K DA ++ M G PD+ + I++ G +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+ D ML G+ PDVYTYN +NGLCK +K ++ ++ +M++ GC PN+ T N
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL +LC L +A G+++EM K V + T+ ++DG ++ A L +M ++
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEA 595
Query: 181 FYPRSS--TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ SS T++ II +K + A +L +++V + P + ++
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P + + I+ L + A+ ++ + + G KPDV+ Y ++ G+ +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ + +M+ GL PD YTYN I G CK V A +IV + G P+ T +L+
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC G+ ++A + E KG++ N+ Y ++ GL + I EA+ L EM +K
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P TF+ ++ +C+ G +++A L+K +++K + P + +L+H S
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN-ILIHGYS 472
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ P + F +I + + +AL IL+ M +G+ PDV Y +L+G+ + +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E + M+ G P+++T+N+ + LC+ K+DEA+ +++ M P+ VT TL+
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 125 LCEAGDL------------------------------------SKAKGVMKEMGLKGVEL 148
C+ GDL + A+ + +EM + +
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ +TYR+M+DG + L EM++ F P +T +I C+C + + EA ++
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695
Query: 209 KKIVAKSFAPGA 220
++V K P A
Sbjct: 696 HRMVQKGLVPEA 707
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++I L K + +A L +M +G++PD Y +++G G + +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ + G +PD +TY I+GLC + + + A+ + + + G KPNV+ NTL+ L
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + +A + EM KG+ + T+ I+++GL + +A L++ M+ K ++P T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+ +I + + ALE++ ++ P + +LL
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F ++R L K+ + +L+++ + G+ P++ Y + + G+ G+ + ++
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G PDV TYN I GLCK +K EA + M+ G +P+ T NTL+ C+ G +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A+ ++ + G + TYR ++DGL + E A L E L K P ++ +I
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +G+I EA +L ++ K P + + L+
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%)
Query: 39 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
+G PD Y ++ G+ EG+ + LF+E L G+ P+V YN I GL Q + E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A Q+ + M + G P V T N L+ LC+ G +S A G++K M KG ++ T+ I++
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
G + ++ A +L+ ML P T+++++ +C+ + +E K +V K AP
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 219 GARAWEALL 227
+ LL
Sbjct: 530 NLFTFNILL 538
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ + +M +P V Y ++S +V G + + +++ M G+ PDVY++ + +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
CK ++ A++++++M GC+ NVV T++G E ++ + +M GV
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L L T+ +L L K ++ E LL++++K+ P T++ I +CQ+G ++ A+ +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 208 MKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLFNQ 247
+ ++ + P + L+ L S +E + N+
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + F ++ L + + +AL +L +MK + PD V + ++ G GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 61 -------YVKLDE-----------------------------LFDEMLVLGLIPDVYTYN 84
+ K++E LF EM+ L PD YTY
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ ++G CK V+ + + M++ G P++ T ++ LC + +A G++ M K
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC---FYPRSSTFDNI 191
G L + D V K E+ L+LE++LKK +Y FD +
Sbjct: 702 G--LVPEAVNTICD--VDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 2 RKLGFCPGVMD--FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
R+ C + D F +IR +++ + MKQ GI P V+ + +LS ++ G
Sbjct: 128 RRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRG 187
Query: 60 DYVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+LFDEM G+ PD YT+N ING CK + VDEA +I M C P+VVT
Sbjct: 188 RTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY 247
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEM 176
NT++ LC AG + A V+ M K ++ N+ +Y ++ G K EI EA L+ +M
Sbjct: 248 NTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELM--KKIVAKSFAPGARAWEALL 227
L + P + T++ +I + + +E +++ +FAP A + L+
Sbjct: 308 LSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILI 360
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 40/254 (15%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEG 59
M+++G P V+ F ++ L+K R A + ++M++ G+ PD + +++G
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV----------------------- 96
+ +F +M + PDV TYN I+GLC+ KV
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283
Query: 97 --------------DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM--KE 140
DEA+ + M+ G KPN VT NTL+ L EA + K ++
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
+ T+ I++ + A + +EML +P S+++ +I +C +
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 201 INEALELMKKIVAK 214
+ A L ++ K
Sbjct: 404 FDRAETLFNELFEK 417
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 45/264 (17%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG------------- 54
P V+ +T ++R ++ +A+ + + M G+KP+ V Y ++ G
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 55 ---------------------IVAEGDYVKLD---ELFDEMLVLGLIPDVYTYNVYINGL 90
I A D LD ++F EML + L PD +Y+V I L
Sbjct: 339 LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 91 CKQNKVDEAIQIVDSMIK----LG---CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
C +N+ D A + + + + LG CKP N + LC G +A+ V +++
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
+GV+ + +Y+ ++ G + + A LL ML++ F P T++ +I + + G
Sbjct: 459 RGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALL 517
Query: 204 ALELMKKIVAKSFAPGARAWEALL 227
A + +++++ S+ P A + ++L
Sbjct: 518 AHDTLQRMLRSSYLPVATTFHSVL 541
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + + ++ L R DA ++ M I P+V+ +T V+ V EG
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +L++EM + PDV+TYN INGLC +VDEA Q++D M+ GC P+VVT NT
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV--------------------------------EL 148
L+ C++ + + + +EM +G+
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY I+L GL + +A +L E M K +T++ +I MC+ G + +A +L
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 209 KKIVAKSFAPGARAWEALL-------LHSGSDLTYSETTFAGL 244
+ + K P ++ ++ SDL Y + GL
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 116/212 (54%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L + R + AL ++ +M + G +PDVV + +++G +L +M +G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
PDV YN I+G CK V++A+++ D M + G + + VT N+L+ LC +G S A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+M++M ++ + N+ T+ ++D V + + EA L EEM ++C P T++++I +
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C G ++EA +++ +V K P + L+
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G+ P V+ + +I + R DA+ ++++M++ G +PDVV Y ++ G G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
ELFD M G+ D TYN + GLC + +A +++ M+ PNV+T
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ + G S+A + +EM + V+ ++ TY +++GL + EA +L+ M+ K
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T++ +I C+ ++E +L +++ +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 32/243 (13%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ FT +I VKE + +A+ + +M + + PDV Y +++G+ G + ++
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG----------------- 110
D M+ G +PDV TYN ING CK +VDE ++ M + G
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 111 ---------------CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+PN+ T + LL LC + KA + + M +EL++ TY I
Sbjct: 362 AGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++ G+ + +A L + K P ++ +I C+K +++ L +K+
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 216 FAP 218
P
Sbjct: 482 LLP 484
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 100/193 (51%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M Q P +V ++ VLS I +Y + LF M V G+ D+Y+YN+ IN LC+ +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
+ A+ +V M+K G +P+VVT ++L+ C+ + A ++ +M G ++ Y
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
++DG + +A L + M + + T+++++ +C G ++A LM+ +V +
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 215 SFAPGARAWEALL 227
P + A++
Sbjct: 239 DIVPNVITFTAVI 251
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I K +R + + +M Q G+ D + Y ++ G G
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+F M P++ TY++ + GLC +V++A+ + ++M K + ++ T N ++
Sbjct: 369 QEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+C+ G++ A + + + KG++ ++ +Y M+ G K + ++ LL +M + P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 124/225 (55%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P F +I+ L E + +A+ ++++M ++G +PDVV Y +++GI GD
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L +M + DV+TY+ I+ LC+ +D AI + M G K +VVT N+L+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+AG + ++K+M + + N+ T+ ++LD V + ++ EA+ L +EM+ +
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ C + ++EA ++ +V +P + +L+
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V+ + ++R L K + D +L M I P+V+ + ++L V EG
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +EL+ EM+ G+ P++ TYN ++G C QN++ EA ++D M++ C P++VT +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C + V + + +G+ N TY I++ G +I A L +EM+
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P T+ ++ +C G + +ALE+ + +
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 116/215 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ FT +I+ +R D + + + + G+ + V Y+I++ G G +EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM+ G++PDV TY + ++GLC K+++A++I + + K +V T++ +C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + A + + KGV+ N+ TY +M+ GL K + EA++LL +M + P T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
++ +I + G + + +L++++ + F+ A +
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 106/199 (53%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L ++ + G +PD + ++ G+ EG + L D M+ G PDV TYN +N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G+C+ A+ ++ M + K +V T +T++ +LC G + A + KEM KG++
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ GL + + +LLL++M+ + P TF+ ++ ++G + EA EL
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 209 KKIVAKSFAPGARAWEALL 227
K+++ + +P + L+
Sbjct: 322 KEMITRGISPNIITYNTLM 340
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 35/250 (14%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F + +R + + + DA+ + +M + P +V ++ S I + + + ++
Sbjct: 56 FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE 115
Query: 73 VLGLIPDVYTYNVYINGLCK-----------------------------------QNKVD 97
+ G+ ++YT N+ IN C+ + KV
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
EA+ +VD M++ GC+P+VVT N+++ +C +GD S A ++++M + V+ ++ TY ++
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
D L I A L +EM K T+++++ +C+ G N+ L+K +V++
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 218 PGARAWEALL 227
P + LL
Sbjct: 296 PNVITFNVLL 305
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + +M+ GIK VV Y ++ G+ G + L +M+ ++P+V T+NV ++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
K+ K+ EA ++ MI G PN++T NTL+ C LS+A ++ M
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ T+ ++ G + + + + K+ + T+ ++ CQ G I A EL
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 209 KKIVAKSFAPGARAWEALL 227
+++V+ P + LL
Sbjct: 427 QEMVSHGVLPDVMTYGILL 445
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 115/236 (48%), Gaps = 4/236 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + ++ + R +A +L+ M ++ PD+V +T ++ G
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F + GL+ + TY++ + G C+ K+ A ++ M+ G P+V+T LL
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L KA + +++ ++L + Y +++G+ ++ +A L + K P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL---LHSGSDLTYS 237
T+ +I +C+KG ++EA L++K+ AP + L+ L G DLT S
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG-DLTAS 562
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 120/228 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P V+ F+ +I KE + ++A N+M Q + P++V Y +++G+ G
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ + ++ G P+ TYN ING CK +VD+ ++I+ M + G + T NT
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L C+AG S A+ V+ M GV +++T+ I+LDGL +IG+A + LE++ K
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
T++ II +C+ + +A L + K +P + +++
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMI 472
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 121/224 (54%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LG + FT +I + R AL L +M + G +P +V + +++G + +
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L D+++ LG P+V YN I+ LC++ +V+ A+ ++ M K+G +P+VVT N+L+
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
L +G + ++ +M G+ ++ T+ ++D + ++ EA EM+++ P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++++I +C GL++EA +++ +V+K F P A + L+
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 108/208 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLGF P ++ F ++ R +A+ +++Q+ G +P+VV Y ++ + +G
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ M +G+ PDV TYN I L + +I+ M+++G P+V+T +
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G L +AK EM + V N+ TY +++GL + EA +L ++ K
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM 208
F+P + T++ +I C+ +++ ++++
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 115/224 (51%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LG+ P V+ + +I L ++ + AL +L MK+ GI+PDVV Y +++ + G +
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ +M+ +G+ PDV T++ I+ K+ ++ EA + + MI+ PN+VT N+L+
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC G L +AK V+ + KG N TY +++G + + +L M +
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T++ + CQ G + A +++ ++V+ P + LL
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + + +I K +R D + IL M +DG+ D Y + G G +
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+++ M+ G+ PD+YT+N+ ++GLC K+ +A+ ++ + K ++T N ++
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
LC+A + A + + LKGV ++ TY M+ GL K EA L +M K+
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 104/219 (47%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
G D+ + +R + + DAL + M + P +V ++ +L I Y + LF
Sbjct: 43 GRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLF 102
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+ +LG+ D+Y++ I+ C+ ++ A+ + M+KLG +P++VT +L+ C
Sbjct: 103 RHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+A ++ ++ G E N+ Y ++D L K ++ A +L+ M K P T+
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++I + G + ++ ++ +P + AL+
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 123/227 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P V +T I L ++ + +A + MK+ G+ P++ Y+ ++ G G+
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ E+LV L+P+V + ++G CK ++ A + M+K G PN+ N
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++G++ +A G++ EM + ++ TY I+++GL + ++ EA+ L ++M +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P S+T++++I C++ + +AL+L ++ A P + L+
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 112/210 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + + +I K ++A+ +L++M+ + PDV YTI+++G+ E
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + LF +M + P TYN I+G CK+ +++A+ + M G +PN++T +T
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C D+ A G+ EM +KG+ ++ TY ++D +A + EA L +ML+
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKK 210
+P TF ++ ++G ++ A++ ++
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 110/206 (53%), Gaps = 1/206 (0%)
Query: 23 EERGMDALYILNQ-MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
R D++++ Q M G+ PDV Y ++ +G Y K ++L DEM LG+ P+VY
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
Y +YI LC+ NK++EA ++ + M K G PN+ T + ++ C+ G++ +A G+ KE+
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
+ + N+ + ++DG E+ A L M+K P ++ +I C+ G +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
EA+ L+ ++ + + +P + L+
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILI 381
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F ++ K + A + M + G+ P++ Y ++ G G+ ++ L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM L L PDV+TY + INGLC +++V EA ++ M P+ T N+L+ C+
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++ +A + EM GVE N+ T+ ++DG +I A L EM K P T
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I ++ + EAL L ++ P + L+
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P + ++ MI K A + ++ + P+VV + ++ G +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V LF M+ G+ P++Y YN I+G CK + EA+ ++ M L P+V T
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC +++A + ++M + + + TY ++ G + + +A L EM
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I C I A+ L ++ K P + AL+
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 7/225 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +I KE AL + ++M G++P+++ ++ ++ G D L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ EM + G++PDV TY I+ K+ + EA+++ M++ G PN T L+ +
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G LS A +E + N + +++GL I AS +M P +
Sbjct: 527 EGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICS 586
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPG-------ARAWEA 225
+ +++ Q+ I + + L ++ P AR ++A
Sbjct: 587 YVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQA 631
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 2/236 (0%)
Query: 1 MRKLGFCPGVMDFTDMIR-FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M + P V + +I F + G DA Y+ + M G PDVV Y +++G
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLG-DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+LF EM GL+ D +TYN I+G C+ K++ A ++ + M+ G P++VT N
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
LL LC G + KA +++++ +++++ TY I++ GL ++ EA L + +K
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLT 235
P + + +I +C+KGL EA +L +++ F P R ++ L + L+
Sbjct: 459 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLS 514
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++DFT ++ + K + +Y+ ++M+ GI D+ +TI++ L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG P + T +NG C+ N+ EA+ +VDSM G PNVV NT++ LC+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
DL+ A V M KG+ + TY ++ GL +A+ LL +M+K+ P
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +I ++G + EA L K+++ +S P + +L+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ FT +I VKE ++A + +M + + P+V Y +++G G +
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD M+ G PDV TYN I G CK +V++ +++ M G + T NTL+ C+
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG L+ A+ V M GV ++ TY I+LD L +I +A +++E++ K T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ II +C+ + EA L + + K P A A+ ++
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 106/211 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G + + +I L R DA +L M + I P+V+ +T ++ V EG+
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ L+ EM+ ++P+V+TYN ING C + +A + D M+ GC P+VVT NT
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++ + + EM +G+ + TY ++ G ++ A + M+
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P T++ ++ C+C G I +AL +++ +
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLGF P ++ ++ + R +A+ +++ M G P+VV Y V++G+ D
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F M G+ D TYN I+GL + +A +++ M+K PNV+
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G+L +A+ + KEM + V N+ TY +++G +G+A + + M+ K
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T++ +I C+ + + ++L ++ + A + L+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG + FT +I + R AL +L +M + G +P +V +L+G
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + L D M G +P+V YN INGLCK ++ A+++ M K G + + VT NT
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L +G + A ++++M + ++ N+ + ++D V + + EA L +EM+++
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++++I C G + +A + +V+K P + L+
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P V+ + +I L K +AL + M++ GI+ D V Y ++SG+ G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L +M+ + P+V + I+ K+ + EA + MI+ PNV T N+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G L AK + M KG ++ TY ++ G + + L EM +
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T++ +I CQ G +N A ++ ++V +P + LL
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 99/200 (49%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA + +M Q P +V +T VL+ I + + L+ +M LG+ D+Y++ + I
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ C+ +++ A+ ++ M+KLG +P++VT +LL C+ +A ++ M G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ Y +++GL ++ A + M KK + T++ +I + G +A L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 208 MKKIVAKSFAPGARAWEALL 227
++ +V + P + AL+
Sbjct: 242 LRDMVKRKIDPNVIFFTALI 261
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V F +I VKE R +A +M + + PD+V Y++++ G+
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E+F M+ G PDV TY++ ING CK KV+ +++ M + G N VT
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C AG L+ A+ + + M GV N+ TY ++L GL +I +A ++L +M K
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
T++ II MC+ G + +A ++ + + P + ++L
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G+ P V+ + +I L K ++ +AL +LN+M++DGI PDVV Y ++SG+ + G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + M + PDV+T+N I+ K+ +V EA + + MI+ P++VT +
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC L +A+ + M KG ++ TY I+++G ++ L EM ++
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T+ +I C+ G +N A E+ +++V P + LL
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + +I L R DA +++ M + I PDV + ++ V EG
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E ++EM+ L PD+ TY++ I GLC +++DEA ++ M+ GC P+VVT +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++ + + EM +GV N TY I++ G ++ A + M+
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM 208
+P T++ ++ +C G I +AL ++
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVIL 419
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL--FDEMLVLGLIPDVYTYNVY 86
AL L +M + G +P +V + +L+G GD V D L FD+M+ +G P+V YN
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGF-CRGDRV-YDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I+GLCK +VD A+ +++ M K G P+VVT N+L+ LC +G S A ++ M + +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
++ T+ ++D V + + EA EEM+++ P T+ +I +C ++EA E
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 207 LMKKIVAKSFAPGARAWEALL 227
+ +V+K P + L+
Sbjct: 313 MFGFMVSKGCFPDVVTYSILI 333
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG P ++ F ++ + +R DALY+ +QM G KP+VV Y ++ G+
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L + M G+ PDV TYN I+GLC + +A ++V M K P+V T N
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A + G +S+A+ +EM + ++ ++ TY +++ GL + + EA + M+ K
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T+ +I C+ + ++L ++ + + L+
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + DF+ ++ + K ++ +Y+ QM+ GI ++ I+L+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG P + T+ +NG C+ ++V +A+ + D M+ +G KPNVV NT++ LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ + A ++ M G+ ++ TY ++ GL +A+ ++ M K+ YP T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+ +I ++G ++EA E ++++ +S P + L+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 93/172 (54%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ ++ +I K ++ + + +M Q G+ + V YTI++ G G
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+E+F M+ G+ P++ TYNV ++GLC K+++A+ I+ M K G ++VT N ++
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+C+AG+++ A + + +G+ ++ TY M+ GL K EA L +M
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%)
Query: 12 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
D+ +M+R ++ + D+L + M Q P + ++ +LS I Y + L+++M
Sbjct: 48 DYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
+LG+ ++ T N+ +N C+ +++ A+ + MIKLG +P++VT +LL C +
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
A + +M G + N+ Y ++DGL ++ A LL M K P T++++
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
I +C G ++A ++ + + P + AL+
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
++KLD+ LF M+ +P + ++ ++ + K K D I + + M LG N+ T
Sbjct: 59 FMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCT 118
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
CN LL C LS A + +M G E ++ T+ +L+G + +A + ++M+
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYS 237
+ P ++ II +C+ ++ AL+L+ ++ P + +L+ S +S
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 238 ETT 240
+ T
Sbjct: 239 DAT 241
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + +T +I+ + + A I +M G+ P+++ Y ++L G+ G
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + +M G+ D+ TYN+ I G+CK +V +A I S+ G P++ T T
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELN 149
++ L + G +A + ++M G+ N
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V FT I K + +A+ + ++M++ G+ P+VV + V+ G+ G Y
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY--- 311
Query: 65 DELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
DE F ++M+ G+ P + TY++ + GL + ++ +A ++ M K G PNV+ N L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + EAG L+KA + M KG+ L TY ++ G + A LL+EML F
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+F ++IC +C + + AL + +++ ++ +PG
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + + G+ P I+L+ +V ++ K E FD ++ G+ PDVY + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
CK KV+EA+++ M + G PNVVT NT++ L G +A ++M +G+E
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
L TY I++ GL IG+A +L+EM KK F P ++N+I + G +N+A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 209 KKIVAKSFAPGARAWEALL 227
+V+K + + + L+
Sbjct: 389 DLMVSKGLSLTSSTYNTLI 407
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 109/213 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A L++M + G+KPD Y+I++ G+ + + +D+ G++PDVYTY+V I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G CK + +E + D M+ +PN V N L+ A C +G LS A + ++M KG+
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N TY ++ G+ + + EA LL EEM + P + +I + G + + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 208 MKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
++++ +K+ P + ++ D +E +
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 6/223 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
PG T +I L K + AL + Q G D +L G+ G KLDE
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG---KLDEA 524
Query: 68 F---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F E+L G + D +YN I+G C + K+DEA +D M+K G KP+ T + L+
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + +A + G+ +++TY +M+DG E +EM+ K P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++++I C+ G ++ ALEL + + K +P + + +L+
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P ++ +I L + +A+ + K++G+ PDV Y++++ G
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E FDEM+ + P+ YN I C+ ++ A+++ + M G PN T +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + + +AK + +EM ++G+E N+ Y ++DG ++ + LL EM K
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T+ +I + G + EA L+ ++ K P + ++ +
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
++ G P V ++ MI K ER + ++M ++P+ V Y ++ G
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
EL ++M G+ P+ TY I G+ ++V+EA + + M G +PNV L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + G + K + +++EM K V N TY +M+ G + EAS LL EM +K
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S T+ I ++G + LE K +++A W L+
Sbjct: 782 VPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 824
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF---DEMLVLGLIPDVYTYN 84
+A I ++ G D V Y ++SG + KLDE F DEM+ GL PD YTY+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKK---KLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ I GL NKV+EAIQ D + G P+V T + ++ C+A + + EM K
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
V+ N Y ++ + A L E+M K P S+T+ ++I M + EA
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
L +++ + P + AL+
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALI 722
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ F +I L R +A +M + G++P ++ Y+I++ G+
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EM G P+V YN I+ + +++AI+I D M+ G T NT
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G A+ ++KEM G +N ++ ++ L A + EML +
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +I +C+ G ++ALEL + + K F R ALL
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ ++ +++ L + +R DA ++L +M + G P+V+ Y ++ + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ D M+ GL TYN I G CK + D A +++ M+ +G N + +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC A + EM L+ + ++ GL + +A L + L K
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
F + T + ++ +C+ G ++EA + K+I+ +
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P +T +I+ + R +A + +M+ +G++P+V YT ++ G G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
VK++ L EM + P+ TY V I G + V EA ++++ M + G P+ +T
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LL-GALCEAGDLSKAKGVMKE 140
+ G L + G L KG +E
Sbjct: 791 FIYGYLKQGGVLEAFKGSDEE 811
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V FT I K + +A+ + ++M++ G+ P+VV + V+ G+ G Y
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY--- 311
Query: 65 DELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
DE F ++M+ G+ P + TY++ + GL + ++ +A ++ M K G PNV+ N L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + EAG L+KA + M KG+ L TY ++ G + A LL+EML F
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+F ++IC +C + + AL + +++ ++ +PG
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + + G+ P I+L+ +V ++ K E FD ++ G+ PDVY + IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
CK KV+EA+++ M + G PNVVT NT++ L G +A ++M +G+E
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
L TY I++ GL IG+A +L+EM KK F P ++N+I + G +N+A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 209 KKIVAKSFAPGARAWEALL 227
+V+K + + + L+
Sbjct: 389 DLMVSKGLSLTSSTYNTLI 407
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 109/213 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A L++M + G+KPD Y+I++ G+ + + +D+ G++PDVYTY+V I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G CK + +E + D M+ +PN V N L+ A C +G LS A + ++M KG+
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N TY ++ G+ + + EA LL EEM + P + +I + G + + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 208 MKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
++++ +K+ P + ++ D +E +
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 6/223 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
PG T +I L K + AL + Q G D +L G+ G KLDE
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG---KLDEA 524
Query: 68 F---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F E+L G + D +YN I+G C + K+DEA +D M+K G KP+ T + L+
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + +A + G+ +++TY +M+DG E +EM+ K P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++++I C+ G ++ ALEL + + K +P + + +L+
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P ++ +I L + +A+ + K++G+ PDV Y++++ G
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E FDEM+ + P+ YN I C+ ++ A+++ + M G PN T +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + + +AK + +EM ++G+E N+ Y ++DG ++ + LL EM K
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T+ +I + G + EA L+ ++ K P + ++ +
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
++ G P V ++ MI K ER + ++M ++P+ V Y ++ G
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
EL ++M G+ P+ TY I G+ ++V+EA + + M G +PNV L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + G + K + +++EM K V N TY +M+ G + EAS LL EM +K
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S T+ I ++G + LE K +++A W L+
Sbjct: 782 VPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 824
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF---DEMLVLGLIPDVYTYN 84
+A I ++ G D V Y ++SG + KLDE F DEM+ GL PD YTY+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKK---KLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ I GL NKV+EAIQ D + G P+V T + ++ C+A + + EM K
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
V+ N Y ++ + A L E+M K P S+T+ ++I M + EA
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
L +++ + P + AL+
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALI 722
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ F +I L R +A +M + G++P ++ Y+I++ G+
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EM G P+V YN I+ + +++AI+I D M+ G T NT
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G A+ ++KEM G +N ++ ++ L A + EML +
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +I +C+ G ++ALEL + + K F R ALL
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ ++ +++ L + +R DA ++L +M + G P+V+ Y ++ + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ D M+ GL TYN I G CK + D A +++ M+ +G N + +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC A + EM L+ + ++ GL + +A L + L K
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
F + T + ++ +C+ G ++EA + K+I+ +
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P +T +I+ + R +A + +M+ +G++P+V YT ++ G G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
VK++ L EM + P+ TY V I G + V EA ++++ M + G P+ +T
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LL-GALCEAGDLSKAKGVMKE 140
+ G L + G L KG +E
Sbjct: 791 FIYGYLKQGGVLEAFKGSDEE 811
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 101/183 (55%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
++P++ Y+ LS I + GD ++ +F E+ LGL+PD Y I+G C + D+A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
Q +++K G P++ T L+GA G +S A+ V + M +G++L++ TY ++ G
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ + L++EM P +T++ +I M +G I+EA E++ +++ + F P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 221 RAW 223
A+
Sbjct: 549 LAF 551
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P V + +I +V +A I++++ + G P + +T V+ G GD
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + L+ M L + PDV T + ++G CK ++++AI + + ++ G KP+VV NT
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG---EASLLLEEML 177
L+ C GD+ KA ++ M +G+ N T+ ++ GL GK + AS+LLEE++
Sbjct: 624 LIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEII 683
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G V+ + +++ K + ++++M+ GI PDV Y I++ +V G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E+ E++ G +P + I G K+ EA + M L KP+VVTC+
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL C+A + KA + ++ G++ ++ Y ++ G +I +A L+ M+++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 FYPRSSTFDNIICCMCQKGLINE----ALELMKKIVAK 214
P ST ++ + K +N ++ L + IVAK
Sbjct: 649 MLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAK 686
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ + + + A I ++ + G+ PD VCYT ++ G G K +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +L G P + T + I + + +A + +M G K +VVT N L+ +
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L+K ++ EM G+ ++ TY I++ +V + I EA+ ++ E++++ F P +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F ++I ++G EA L + P ALL
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L MK GI+PD+V +T+ + + G + + ++ + G+ D + + I+G C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K K +EAI+++ S +PN+ ++ L +C GD+ +A + +E+ G+ +
Sbjct: 353 KVGKPEEAIKLIHS---FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK-GLINEALELMKK 210
Y M+DG +A +LK P S T I+ C + G I++A + +
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 211 I 211
+
Sbjct: 469 M 469
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 96/225 (42%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+LG P + +T MI R A + + G P + TI++ G
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +F M GL DV TYN ++G K +++++ +++D M G P+V T N L+
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
++ G + +A ++ E+ +G + + ++ G + + EA +L M
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T ++ C+ + +A+ L K++ P + L+
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDV-VCYTIVLSGIVAEGDYVKLDELFDEM 71
F+ +I ++E + AL + ++ Q GI P VC +++ + G + E + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA-REFVEHM 262
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
L G + +++I C D+ +++ M G +P++V + LC+AG L
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEM-LKKCFYPRSSTF 188
+A V+ ++ L G+ + + ++DG VGK E EA L+ L+ + SS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE--EAIKLIHSFRLRPNIFVYSSFL 380
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAP 218
NI C G + A + ++I P
Sbjct: 381 SNI----CSTGDMLRASTIFQEIFELGLLP 406
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 101/183 (55%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
++P++ Y+ LS I + GD ++ +F E+ LGL+PD Y I+G C + D+A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
Q +++K G P++ T L+GA G +S A+ V + M +G++L++ TY ++ G
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ + L++EM P +T++ +I M +G I+EA E++ +++ + F P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 221 RAW 223
A+
Sbjct: 549 LAF 551
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P V + +I +V +A I++++ + G P + +T V+ G GD
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + L+ M L + PDV T + ++G CK ++++AI + + ++ G KP+VV NT
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG---EASLLLEEML 177
L+ C GD+ KA ++ M +G+ N T+ ++ GL GK + AS+LLEE++
Sbjct: 624 LIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEII 683
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G V+ + +++ K + ++++M+ GI PDV Y I++ +V G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E+ E++ G +P + I G K+ EA + M L KP+VVTC+
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL C+A + KA + ++ G++ ++ Y ++ G +I +A L+ M+++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 FYPRSSTFDNIICCMCQKGLINE----ALELMKKIVAK 214
P ST ++ + K +N ++ L + IVAK
Sbjct: 649 MLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAK 686
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ + + + A I ++ + G+ PD VCYT ++ G G K +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +L G P + T + I + + +A + +M G K +VVT N L+ +
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L+K ++ EM G+ ++ TY I++ +V + I EA+ ++ E++++ F P +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F ++I ++G EA L + P ALL
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L MK GI+PD+V +T+ + + G + + ++ + G+ D + + I+G C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K K +EAI+++ S +PN+ ++ L +C GD+ +A + +E+ G+ +
Sbjct: 353 KVGKPEEAIKLIHS---FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK-GLINEALELMKK 210
Y M+DG +A +LK P S T I+ C + G I++A + +
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 211 I 211
+
Sbjct: 469 M 469
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 96/225 (42%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+LG P + +T MI R A + + G P + TI++ G
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +F M GL DV TYN ++G K +++++ +++D M G P+V T N L+
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
++ G + +A ++ E+ +G + + ++ G + + EA +L M
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T ++ C+ + +A+ L K++ P + L+
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDV-VCYTIVLSGIVAEGDYVKLDELFDEM 71
F+ +I ++E + AL + ++ Q GI P VC +++ + G + E + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA-REFVEHM 262
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
L G + +++I C D+ +++ M G +P++V + LC+AG L
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEM-LKKCFYPRSSTF 188
+A V+ ++ L G+ + + ++DG VGK E EA L+ L+ + SS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE--EAIKLIHSFRLRPNIFVYSSFL 380
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAP 218
NI C G + A + ++I P
Sbjct: 381 SNI----CSTGDMLRASTIFQEIFELGLLP 406
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + FT ++ +E + M+A +L QMK+ G++PD+V +T +LSG G
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 291
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCK-QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L ++M G P+V Y V I LC+ + ++DEA+++ M + GC+ ++VT L+
Sbjct: 292 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + K V+ +M KGV + TY ++ K + E L+E+M ++ +P
Sbjct: 352 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 411
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
++ +I C+ G + EA+ L ++ A +PG
Sbjct: 412 LLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MRK GF P V +T +I+ L + E+ MD A+ + +M++ G + D+V YT ++SG G
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
K + D+M G++P TY + K+ + +E +++++ M + GC P+++ N
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ C+ G++ +A + EM G+ + T+ IM++G + + EA +EM+ +
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Query: 180 CFY--PRSSTFDNII 192
+ P+ T +++
Sbjct: 477 GIFSAPQYGTLKSLL 491
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 5/217 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P ++ FT+++ + DA ++N M++ G +P+V CYT+++ +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
++DE +F EM G D+ TY I+G CK +D+ ++D M K G P+ VT
Sbjct: 322 --RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVT 379
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++ A + + ++++M +G +L Y +++ E+ EA L EM
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P TF +I +G + EA K++V++
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
I+P++ +VL A + VK E+ DEM GL PD Y + ++ LCK V EA
Sbjct: 165 IEPELF---VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEA 221
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
++ + M + PN+ +LL C G L +AK V+ +M G+E ++ + +L G
Sbjct: 222 SKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ-KGLINEALEL 207
++ +A L+ +M K+ F P + + +I +C+ + ++EA+ +
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
P+++ V + N V +A++++D M K G +P+ LL ALC+ G + +A V
Sbjct: 167 PELFV--VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV 224
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
++M K NL + +L G + ++ EA +L +M + P F N++
Sbjct: 225 FEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALL 227
G + +A +LM + + F P + L+
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++DFT ++ R +Y +M+ GI D+ +TI++ +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG P + T+ ++G C N++ +A +V M+K G +PNVV NTL+ LC+
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+L+ A ++ EM KG+ ++ TY +L GL +A+ +L +M+K+ P T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +I ++G ++EA EL K+++ S P + +++
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ F ++ R DA ++ M + G +P+VV Y ++ G+ G+
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL +EM GL DV TYN + GLC + +A +++ M+K P+VVT
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G+L +A+ + KEM V+ N TY +++GL + +A + M K
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T++ +I C+ +++E ++L +++ + F + L+
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G+ P V+ + +I L K AL +LN+M++ G+ DVV Y +L+G+ G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +M+ + PDV T+ I+ KQ +DEA ++ MI+ PN VT N+
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC G L AK M KG N+ TY ++ G + E L + M +
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
F T++ +I CQ G + AL++ +V++ P
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V+ FT +I VK+ +A + +M Q + P+ V Y +++G+ G
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ FD M G P+V TYN I+G CK VDE +++ M G ++ T NT
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G L A + M + V ++ T+ I+L GL EI A + ++M +
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
Y ++ +I +C+ + +A EL ++ + P AR + ++L
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
R DA + +M P +V +T +L+ Y + +M + G+ D+Y++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ I+ C+ +++ A+ ++ M+KLG +P++VT +LL C + A ++ M
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G E N+ Y ++DGL E+ A LL EM KK T++ ++ +C G ++A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
+++ ++ +S P + AL+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALI 253
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE- 66
P + + +I L R DA + M G P+VV Y ++SG + +DE
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK---FRMVDEG 335
Query: 67 --LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
LF M G D++TYN I+G C+ K+ A+ I M+ P+++T LL
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G++ A +M + + Y IM+ GL ++ +A L + + P
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
+ T+ +I +C+ G EA EL++++
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRM 482
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + +I K + + + +M +G D+ Y ++ G G
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F M+ + PD+ T+ + ++GLC +++ A+ D M + +V N
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
++ LC+A + KA + + ++GV+ + TY IM+ GL EA L+ M
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD---- 60
GF + + +I + + AL I M + PD++ + I+L G+ G+
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
VK D++ + +G++ YN+ I+GLCK +KV++A ++ + G KP+ T
Sbjct: 406 LVKFDDMRESEKYIGIV----AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ LC+ G +A +++ M +G+
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGI 487
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 8/230 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +I L + +A+ L +MK GI+P+V Y+ ++ G+ +G ++ EL
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ G P++ TY I GLCK+ K+ EA++++D M G KP+ ++ C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRI-------MLDGLVGKAEIGEASLLLEEMLKKC 180
+A + EM L G+ N T+ I ++ GL +L L M +
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL-SMRSRG 403
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
T ++++ C+C+KG +A++L+ +IV P W+ L+ H+
Sbjct: 404 ISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHT 453
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDA-LYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR++G P V +I+ L + + +DA L I +M + G PD Y ++SG+ G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +LF EM+ P V TY INGLC VDEA++ ++ M G +PNV T +
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L+ LC+ G +A + + M +G N+ TY ++ GL + +I EA LL+ M +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
P + + +I C EA + +++ P W
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD-E 66
P + ++ LV+E + A M++ G+ P V +++ + V +
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+F EM G PD YTY I+GLC+ ++DEA ++ M++ C P VVT +L+ LC
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ ++ +A ++EM KG+E N+ TY ++DGL +A L E M+ + P
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
T+ +I +C++ I EA+EL+ ++ + P A
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Query: 24 ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTY 83
R D+L + ++MK P Y VL+ +V E + + M +GL P V +
Sbjct: 100 HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASL 159
Query: 84 NVYINGLCKQN-KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
NV I LC+ + VD ++I M K GC P+ T TL+ LC G + +AK + EM
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
K + TY +++GL G + EA LEEM K P T+ +++ +C+ G
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSL 279
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
+A+EL + ++A+ P + L+
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLI 304
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ +T +I L KE++ +A+ +L++M G+KPD Y V+SG A
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVY-------INGLCKQNKVDEAIQIVDSMIKLGCKP 113
+ + DEM++ G+ P+ T+N++ + GLC N A + SM G
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISV 406
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
V T +L+ LC+ G+ KA ++ E+ G + T+++++ + K +GEAS
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEAS 463
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T MI K + +A +L+ M + GI P V + +++ G G+ + +E+
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ G PDV T+ I+G C+ +V + ++ + M G PN T + L+ ALC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L KA+ ++ ++ K + Y ++DG ++ EA++++EEM KK P T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +I C KG + EA+ + K+VA +P +LL
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEG 59
M G P ++ + +I+ K A + +K + PDVV YT ++SG G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ L D+ML LG+ P T+NV ++G K ++ A +I MI GC P+VVT
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L+ C G +S+ + +EM +G+ N TY I+++ L + + +A LL ++ K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P+ ++ +I C+ G +NEA +++++ K P + L++
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C F +IR L + AL +L M G +PD+V Y ++ G + K E
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 67 LFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+F ++ + PDV TY I+G CK K+ EA ++D M++LG P VT N L+
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+AG++ A+ + +M G ++ T+ ++DG ++ + L EEM + +P +
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T+ +I +C + + +A EL+ ++ +K P
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIP 415
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
M ++ LVK +R DA+ + ++ + D + I++ G+ G K EL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG--CKPNVVTCNTLLGALCEA 128
M G PD+ TYN I G CK N++++A ++ +K G C P+VVT +++ C+A
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKA 290
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G + +A ++ +M G+ T+ +++DG E+ A + +M+ +P TF
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I C+ G +++ L +++ A+ P A + L+
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 102/207 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG P + F ++ K + A I +M G PDVV +T ++ G G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L++EM G+ P+ +TY++ IN LC +N++ +A +++ + P N
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+AG +++A +++EM K + + T+ I++ G K + EA + +M+
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
P T +++ C+ + G+ EA L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T MI K + +A +L+ M + GI P V + +++ G G+ + +E+
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ G PDV T+ I+G C+ +V + ++ + M G PN T + L+ ALC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L KA+ ++ ++ K + Y ++DG ++ EA++++EEM KK P T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +I C KG + EA+ + K+VA +P +LL
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEG 59
M G P ++ + +I+ K A + +K + PDVV YT ++SG G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ L D+ML LG+ P T+NV ++G K ++ A +I MI GC P+VVT
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L+ C G +S+ + +EM +G+ N TY I+++ L + + +A LL ++ K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P+ ++ +I C+ G +NEA +++++ K P + L++
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C F +IR L + AL +L M G +PD+V Y ++ G + K E
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 67 LFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+F ++ + PDV TY I+G CK K+ EA ++D M++LG P VT N L+
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+AG++ A+ + +M G ++ T+ ++DG ++ + L EEM + +P +
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T+ +I +C + + +A EL+ ++ +K P
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIP 415
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
M ++ LVK +R DA+ + ++ + D + I++ G+ G K EL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG--CKPNVVTCNTLLGALCEA 128
M G PD+ TYN I G CK N++++A ++ +K G C P+VVT +++ C+A
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKA 290
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G + +A ++ +M G+ T+ +++DG E+ A + +M+ +P TF
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I C+ G +++ L +++ A+ P A + L+
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 102/207 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG P + F ++ K + A I +M G PDVV +T ++ G G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L++EM G+ P+ +TY++ IN LC +N++ +A +++ + P N
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+AG +++A +++EM K + + T+ I++ G K + EA + +M+
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
P T +++ C+ + G+ EA L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 35/246 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K GF P V ++ +I L K + DAL + ++M + G+ PDV CY I++ G + E D
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 61 YVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ EL+D +L + P+V T+N+ I+GL K +VD+ ++I + M + + ++ T +
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVEL------------------------------- 148
+L+ LC+AG++ KA+ V E+ + +
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 149 ---NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
N+ +Y I++ GL+ +I EA+++ M K + +T+ I +C G +N+AL
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 206 ELMKKI 211
+M+++
Sbjct: 415 GVMQEV 420
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
L+++ R +A + L +M ++G +P VV Y I++ G+ G + + EML G PD
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
+ TY++ + GLC+ K+D A+++ ++ G + +V+ N L+ LC G L A VM
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII--CCMCQ 197
M + NL TY +++G + A+++ M K P +++ I+ CMC+
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCR 653
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALL 227
++ A+E P W L+
Sbjct: 654 G--VSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 96/184 (52%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
++V Y I++ G++ G + ++ M G D TY ++I+GLC V++A+ ++
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
+ G +V +++ LC+ L +A ++KEM GVELN H ++ GL+
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 164 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
+ +GEAS L EM K P +++ +IC +C+ G EA +K+++ + P + +
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 224 EALL 227
LL
Sbjct: 538 SILL 541
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
++ + +I+ L++ + +A I M G D Y I + G+ G K +
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
E+ G DVY Y I+ LCK+ +++EA +V M K G + N CN L+G L
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
L +A ++EMG G + +Y I++ GL + GEAS ++EML+ + P T+
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 190 NIICCMCQKGLINEALELMKKIV 212
++C +C+ I+ ALEL + +
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFL 561
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I+ K++ A L+ M ++G KPDV Y+ V++ + G
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTLLG 123
ELFDEM G+ PDV YN+ I+G K+ A+++ D +++ PNV T N ++
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
L + G + + + M E +L+TY ++ GL + +A + E+ ++
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 184 RSSTFDNIICCMCQKGLINEALELMK 209
T++ ++ C+ G I E+LEL +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWR 349
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 29 ALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
AL + +M++ G +P + Y +L+ V +VK++ LF G+ P++ TYNV I
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
CK+ + ++A +D M K G KP+V + +T++ L +AG L A + EM +GV
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLK-KCFYPRSSTFDNIICCMCQKGLINEALE 206
++ Y I++DG + + + A L + +L+ YP T + +I + + G +++ L+
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 207 LMKKI 211
+ +++
Sbjct: 277 IWERM 281
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + +I L K + +A + +M ++G KPD+ Y+I+L G+ +
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL+ + L GL DV +N+ I+GLC K+D+A+ ++ +M C N+VT NT
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + GD ++A + M G++ ++ +Y ++ GL + A ++
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Query: 181 FYPRSSTFDNII 192
+P T++ ++
Sbjct: 670 IFPTVYTWNILV 681
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 1 MRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR++ C P + + ++ V+ ++ + + + G+ P++ Y +++ +
Sbjct: 104 MREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
++ K D M G PDV++Y+ IN L K K+D+A+++ D M + G P+V N
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 120 TLLGALCEAGDLSKAKGVMKE-MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L+ + D A + + V N+ T+ IM+ GL + + + E M +
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEA 204
T+ ++I +C G +++A
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKA 309
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL ++ +++ G DV Y ++ + + + L EM G+ + + N I
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GL + +++ EA + M K GC+P VV+ N L+ LC+AG +A +KEM G +
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+L TY I+L GL +I A L + L+ + +I +C G +++A+ +M
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 92 KQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
K + D+A+ + M ++ GC+P + + NTLL A EA K + + GV NL
Sbjct: 90 KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNL 149
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
TY +++ K E +A L+ M K+ F P ++ +I + + G +++ALEL +
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 211 IVAKSFAPGARAWEALL 227
+ + AP + L+
Sbjct: 210 MSERGVAPDVTCYNILI 226
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ ++ M+ ++V Y ++ G GD + ++ M +GL PD+ +YN +
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
GLC V A++ D G P V T N L+ A+
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 15/242 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEER---------------GMDALYILNQMKQDGIKPDV 45
+ KLGF P V+ F ++ L E+R ++A+ + +QM + G+ P V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 46 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 105
+ + +++G+ EG ++ L ++M+ GL DV TY +NG+CK A+ ++
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
M + KP+VV + ++ LC+ G S A+ + EM KG+ N+ TY M+DG
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
+A LL +M+++ P TF+ +I ++G + EA +L +++ + P + +
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 226 LL 227
++
Sbjct: 407 MI 408
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V + MI R DA +L M + I PDV+ + ++S V EG
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++L DEML + PD TYN I G CK N+ D+A + D M P+VVT NT
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C A + + +++E+ +G+ N TY ++ G + A L +EM+
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P + T + ++ C+ + EALEL + I
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVI 528
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 107/204 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P V+ F +I L E R ++A ++N+M G+ DVV Y +++G+ GD
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +M + PDV Y+ I+ LCK +A + M++ G PNV T N
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G S A+ ++++M + + ++ T+ ++ V + ++ EA L +EML +C
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 181 FYPRSSTFDNIICCMCQKGLINEA 204
+P + T++++I C+ ++A
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDA 420
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 4/199 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L++M++ IKPDVV Y+ ++ + +G + LF EML G+ P+V+TYN I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C + +A +++ MI+ P+V+T N L+ A + G L +A+ + EM + +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ TY M+ G +A + + M P TF+ II C+ ++E ++L+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 209 KKIVAKSFAPGARAWEALL 227
++I + + L+
Sbjct: 456 REISRRGLVANTTTYNTLI 474
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 111/213 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I + +R + + +L ++ + G+ + Y ++ G + +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM+ G+ PD T N+ + G C+ K++EA+++ + + + V N ++ +C+
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + + + GVE ++ TY +M+ G GK+ I +A++L +M P +ST
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ +I + G I++++EL+ ++ + F+ A
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I L K+ DA Y+ ++M + GI P+V Y ++ G + G + L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ + PDV T+N I+ K+ K+ EA ++ D M+ P+ VT N+++ C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AK + M V T+ ++D + E LL E+ ++ ++T
Sbjct: 414 HNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ +N A +L +++++ P LL
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L+ +M + + ++Y++N+ I C +K+ ++ + KLG +P+VVT NTLL LC
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 127 EAGDLSKAK---GVMKEMGL--------KGVELNLH----TYRIMLDGLVGKAEIGEASL 171
+S+A G M E G + VE+ L T+ +++GL + + EA+
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 172 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL---- 227
L+ +M+ K + T+ I+ MC+ G AL L+ K+ P + A++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 228 ---LHSGSDLTYSETTFAGL 244
HS + +SE G+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGI 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G CP + ++ + E+ +AL + ++ I D V Y I++ G+ +
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF + + G+ PDV TYNV I+G C ++ + +A + M G +P+ T NTL+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
+AG++ K+ ++ EM G + T +++ D
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 15/242 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEER---------------GMDALYILNQMKQDGIKPDV 45
+ KLGF P V+ F ++ L E+R ++A+ + +QM + G+ P V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 46 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 105
+ + +++G+ EG ++ L ++M+ GL DV TY +NG+CK A+ ++
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
M + KP+VV + ++ LC+ G S A+ + EM KG+ N+ TY M+DG
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
+A LL +M+++ P TF+ +I ++G + EA +L +++ + P + +
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 226 LL 227
++
Sbjct: 407 MI 408
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V + MI R DA +L M + I PDV+ + ++S V EG
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++L DEML + PD TYN I G CK N+ D+A + D M P+VVT NT
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C A + + +++E+ +G+ N TY ++ G + A L +EM+
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P + T + ++ C+ + EALEL + I
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVI 528
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P V+ F +I L E R ++A ++N+M G+ DVV Y +++G+ GD
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +M + PDV Y+ I+ LCK +A + M++ G PNV T N
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G S A+ ++++M + + ++ T+ ++ V + ++ EA L +EML +C
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM 208
+P + T++++I C+ ++A +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 4/199 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L++M++ IKPDVV Y+ ++ + +G + LF EML G+ P+V+TYN I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C + +A +++ MI+ P+V+T N L+ A + G L +A+ + EM + +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ TY M+ G +A + + M P TF+ II C+ ++E ++L+
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 209 KKIVAKSFAPGARAWEALL 227
++I + + L+
Sbjct: 456 REISRRGLVANTTTYNTLI 474
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 111/213 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I + +R + + +L ++ + G+ + Y ++ G + +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM+ G+ PD T N+ + G C+ K++EA+++ + + + V N ++ +C+
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + + + GVE ++ TY +M+ G GK+ I +A++L +M P +ST
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ +I + G I++++EL+ ++ + F+ A
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I L K+ DA Y+ ++M + GI P+V Y ++ G + G + L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ + PDV T+N I+ K+ K+ EA ++ D M+ P+ VT N+++ C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AK + M V T+ ++D + E LL E+ ++ ++T
Sbjct: 414 HNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
++ +I C+ +N A +L +++++ P
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L+ +M + + ++Y++N+ I C +K+ ++ + KLG +P+VVT NTLL LC
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 127 EAGDLSKA---KGVMKEMGL--------KGVELNLH----TYRIMLDGLVGKAEIGEASL 171
+S+A G M E G + VE+ L T+ +++GL + + EA+
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 172 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL---- 227
L+ +M+ K + T+ I+ MC+ G AL L+ K+ P + A++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 228 ---LHSGSDLTYSETTFAGL 244
HS + +SE G+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGI 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G CP + ++ + E+ +AL + ++ I D V Y I++ G+ +
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF + + G+ PDV TYNV I+G C ++ + +A + M G +P+ T NTL+
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 125 LCEAGDLSKAKGVMKEMGLKG 145
+AG++ K+ ++ EM G
Sbjct: 617 CLKAGEIDKSIELISEMRSNG 637
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G++PDV Y +++SG + + LF +M G PD TYN I G K ++D++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
I+++ M G + T +C D
Sbjct: 627 IELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + FT ++ L + DA+ + N+M + +KP+ V Y +++ G EGD K
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E EM G++PD Y+Y I+GLC + EA VD + K C+ N + LL
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G L +A V +EM +GV+L+L Y +++DG + + LL+EM + P
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I + G EA + ++ + P + A++
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G P + + +I L K + +A + ++M + G++P+ V Y+I++ G
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EM+ GL VY YN ING CK + A + MI +P VVT +L+G
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C G ++KA + EM KG+ +++T+ +L GL I +A L EM + P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C++G +++A E +K++ K P ++ L+
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 114/224 (50%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
L F P + ++ L K + +AL ++ ++ G+ P++ Y ++ + + +
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ LFD M +GL P+ TY++ I+ C++ K+D A+ + M+ G K +V N+L+
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+ GD+S A+G M EM K +E + TY ++ G K +I +A L EM K P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF ++ + + GLI +A++L ++ + P + ++
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 35/253 (13%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
++ + +I L K+++ +A+ I + +KPDVV Y ++ G+ ++ E+ D
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 70 EMLVL-----------------------------------GLIPDVYTYNVYINGLCKQN 94
EML L G+ P+++ YN I+ LCK
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K EA + D M K+G +PN VT + L+ C G L A + EM G++L+++ Y
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+++G +I A + EM+ K P T+ +++ C KG IN+AL L ++ K
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 215 SFAPGARAWEALL 227
AP + LL
Sbjct: 502 GIAPSIYTFTTLL 514
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 99/183 (54%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +M ++P VV YT ++ G ++G K L+ EM G+ P +YT+ ++GL
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ + +A+++ + M + KPN VT N ++ CE GD+SKA +KEM KG+ + +
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+YR ++ GL + EA + ++ + K + ++ C++G + EAL + +++
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 212 VAK 214
V +
Sbjct: 639 VQR 641
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
F +I+ V+ R +D + + M + + P+V + +L G+V + ELF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
+ +G+ PDVY Y I LC+ + A +++ M GC N+V N L+ LC+ +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A G+ K++ K ++ ++ TY ++ GL E +++EML F P + ++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + ++G I EAL L+K++V +P + AL+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 2/197 (1%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L +M G+KPD V YT ++ GD+ + ++D M+ G +P+ TY INGLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV-MKEMGLKGVELNL 150
K V+EA + M + PN VT L L + G++ K V + LKG+ N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANT 787
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
TY +++ G + I EAS L+ M+ P T+ +I +C++ + +A+EL
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 211 IVAKSFAPGARAWEALL 227
+ K P A+ L+
Sbjct: 848 MTEKGIRPDRVAYNTLI 864
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G P + ++ +I + + AL L +M G+K V Y +++G GD
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EM+ L P V TY + G C + K+++A+++ M G P++ T T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL L AG + A + EM V+ N TY +M++G + ++ +A L+EM +K
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 181 FYPRSSTFDNIICCMCQKGLINEA 204
P + ++ +I +C G +EA
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEA 596
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 35/260 (13%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+ P V + ++ LVK A+ + N M GI+PDV YT V+ + D
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 244
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ E+ M G ++ YNV I+GLCK+ KV EA+ I + KP+VVT TL+
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 123 GALCEAGDLSKAKGVMKEM-----------------GLK------------------GVE 147
LC+ + +M EM GL+ GV
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
NL Y ++D L + EA LL + M K P T+ +I C++G ++ AL
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ ++V + +L+
Sbjct: 425 LGEMVDTGLKLSVYPYNSLI 444
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV-AEGDYVK 63
G P + +T +I L K +A + ++M+ P+ V Y L + E D K
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK 771
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL + +L GL+ + TYN+ I G C+Q +++EA +++ MI G P+ +T T++
Sbjct: 772 AVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC D+ KA + M KG+ + Y ++ G E+G+A+ L EML++ P
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Query: 184 RSST 187
+ T
Sbjct: 891 NNKT 894
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T ++ + + AL + ++M GI P + +T +LSG+ G +L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM + P+ TYNV I G C++ + +A + + M + G P+ + L+ LC
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
G S+AK + + ELN Y +L G + ++ EA + +EM+++
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ + P + + + L K E M L+ G+ + Y +++ G +G
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL M+ G+ PD TY IN LC++N V +AI++ +SM + G +P+ V NT
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
L+ C AG++ KA + EM +G+ N T R
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G + +IR ++ R +A ++ +M DG+ PD + YT +++ + D K
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL++ M G+ PD YN I+G C ++ +A ++ + M++ G PN T T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V + +I L K R +A L +M+ GI P++V + LSG GD K+
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ +++LV G PDV T+++ IN LC+ ++ +A M++ G +PN +T N L+ +
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C GD ++ + +M G+ +L+ Y + ++ +A LL+ ML+ P
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+ T+ +I + + G +EA E+ I P +
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ P F + L+K ++ I + G+KP Y +++ ++ + +
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D +M V GL+ VY+YN I+ LCK +++ A + M G PN+VT NT L
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
GD+ K GV++++ + G + ++ T+ ++++ L EI +A +EML+ P
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C G + +++L K+ +P A+ A +
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P V+ F+ +I L + + DA +M + GI+P+ + Y I++ + GD +
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF +M GL PD+Y YN I CK KV +A +++ +M+++G KP+ T +TL+ A
Sbjct: 550 VKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 609
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
L E+G S+A+ + + G + +T R++
Sbjct: 610 LSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
LG P + +I LVK +D Y+ QM+ DG KPD Y I++ G+ +G
Sbjct: 174 LGMKPSTRLYNAVIDALVKSN-SLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVD 232
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ L +M G P+V+TY + I+G +VDEA++ ++ M PN T T +
Sbjct: 233 EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
+ KA V+ K L Y +L L + E L ++ ++ +
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P SSTF+ + C+ + + E + V++ PG + L+
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 41/258 (15%)
Query: 29 ALYILNQMKQDG--IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
++ +L +++ G I +++C I G + Y +++F ++ LG+ P YN
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYC--NDVFAQISFLGMKPSTRLYNAV 186
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I+ L K N +D A M GCKP+ T N L+ +C+ G + +A ++K+M +G
Sbjct: 187 IDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGN 246
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST------------------- 187
N+ TY I++DG + + EA LE M + P +T
Sbjct: 247 RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFE 306
Query: 188 ----------------FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LH 229
+D ++ C+ + E + ++KI + + P + + A + L
Sbjct: 307 VLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 230 SGSDLTYSETTFAGLFNQ 247
G DL + F G ++
Sbjct: 367 KGHDLVETCRIFDGFVSR 384
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G PG + +++ L+ +R + L QM DG+ V Y V+ +
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
EM G+ P++ T+N +++G + V + +++ ++ G KP+V+T + ++
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC A ++ A KEM G+E N TY I++ + + L +M + P
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ I C+ + +A EL+K ++ P + L+
Sbjct: 565 LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
L ++ + G PD + +S ++ D V+ +FD + G+ P Y V + L
Sbjct: 342 FLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALL 401
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ E + + M G +V + N ++ LC+A + A + EM +G+ NL
Sbjct: 402 NAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV 461
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
T+ L G + ++ + +LE++L F P TF II C+C+ I +A + K++
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Query: 212 VAKSFAPGARAWEALL 227
+ P + L+
Sbjct: 522 LEWGIEPNEITYNILI 537
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 1 MRKLGFCPGVMDFTDM-----IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI 55
M+ G P ++ F +R VK+ G +L ++ G KPDV+ ++++++ +
Sbjct: 451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHG-----VLEKLLVHGFKPDVITFSLIINCL 505
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
+ + F EML G+ P+ TYN+ I C D ++++ M + G P++
Sbjct: 506 CRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDL 565
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
N + + C+ + KA+ ++K M G++ + TY ++ L EA +
Sbjct: 566 YAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSS 625
Query: 176 MLKKCFYPRSST 187
+ + P S T
Sbjct: 626 IERHGCVPDSYT 637
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 2/226 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I+ K +R + + + +M Q G+ + V YT ++ G D +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G+ PD+ TYN+ ++GLC V+ A+ + + M K K ++VT T++ ALC+
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG + + + LKGV+ N+ TY M+ G K EA L EM + P S T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 231
++ +I + G + EL+K++ + FA A + + +LH G
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 119/228 (52%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M KLG+ P ++ ++ R +A+ +++QM + G +PD V +T ++ G+
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L + M+V G PD+ TY INGLCK+ + D A+ +++ M K + +VV NT
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ + A + +M KG++ ++ TY ++ L +AS LL +ML+K
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIV-AKSFAPGARAWEALL 227
P F+ +I ++G + EA +L ++V +K P A+ L+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG + ++ I + + + AL IL +M + G P +V +L+G
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D+M+ +G PD T+ ++GL + NK EA+ +V+ M+ GC+P++VT
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ G+ A ++ +M +E ++ Y ++DGL + +A L +M K
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I C+C G ++A L+ ++ K+ P + AL+
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +++F+ ++ + K + + + QM+ GI ++ Y+I ++ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M+ LG P + T N +NG C N++ EA+ +VD M+++G +P+ VT TL+ L +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
S+A +++ M +KG + +L TY +++GL + E A LL +M K
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ II +C+ +++A +L K+ K P + L+
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 4/205 (1%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ + +I L K + DA + N+M+ GIKPDV Y ++S + G + L
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEA 128
+ML + PD+ +N I+ K+ K+ EA ++ D M+K C P+VV NTL+ C+
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+ + V +EM +G+ N TY ++ G + A ++ ++M+ +P T+
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 189 DNIICCMCQKGLINEAL---ELMKK 210
+ ++ +C G + AL E M+K
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQK 454
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 102/184 (55%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + M + P +V ++ +LS I + + L ++M LG+ ++YTY+++I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+++++ A+ I+ M+KLG P++VT N+LL C +S+A ++ +M G +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ T+ ++ GL + EA L+E M+ K P T+ +I +C++G + AL L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 208 MKKI 211
+ K+
Sbjct: 238 LNKM 241
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + +T +I + +A + QM DG+ PD++ Y I+L G+ G+
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+ M + D+ TY I LCK KV++ + S+ G KPNVVT T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G +A + EM G N TY ++ + + ++ L++EM
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
F +STF ++ M G ++++
Sbjct: 562 FAGDASTF-GLVTNMLHDGRLDKSF 585
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 68/133 (51%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K+D+AI + M+K P++V + LL A+ + + ++M G+ NL+TY
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
I ++ ++++ A +L +M+K + P T ++++ C I+EA+ L+ ++V
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 215 SFAPGARAWEALL 227
+ P + L+
Sbjct: 175 GYQPDTVTFTTLV 187
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 116/226 (51%), Gaps = 7/226 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + +I+ L + A + ++ + IK D Y+ ++S ++ G ++
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ +EM G PD TYNV ING C +N + A +++D M++ G KP+V++ N +LG
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+A + ++M +G + +YRI+ DGL + EA+++L+EML K + PR
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR 397
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVA---KSFAPGARAWEALL 227
+ + +C+ G LE++ K+++ + A A W ++
Sbjct: 398 RDRLEGFLQKLCESG----KLEILSKVISSLHRGIAGDADVWSVMI 439
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
KPD Y I++ G G + +LFDEM+ + P T+ I+GLCK ++V EA++
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 102 IVDSMIKL-GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+ M+K+ G +P V +L+ ALC+ G+LS A + E ++++ Y ++ L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+ E S++LEEM +K P + T++ +I C + A ++ ++V K P
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 221 RAWEALL 227
++ +L
Sbjct: 329 ISYNMIL 335
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
++ G P + + +I L K + +AL+ L ++ G + D + Y+ ++ + EG
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 62 VKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L +EML G P DV TY +NG C+ +VD+A +++ M G KPN V+
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL +C G +A+ +M N TY +++ GL + ++ EA ++ EM+ K
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
F+P + ++ +C+ G +EA + M++ + K A
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 111/215 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + +T ++ + + + ++A ++N ++ P+ + Y++++ G+ EG
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ EM++ G P N+ + LC+ + EA + ++ + GC NVV T
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ +L A V+ +M L ++ TY ++D L K I EA+ L+++ML K
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
P T+ +I CQ G +++ + +++K++++
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DAL +L M++ G++P+++ + V K + M V+G++P+V TYN I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK-GV 146
G C ++V+EAI++++ M GC P+ V+ T++G LC+ + + + +MK+M + G+
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ TY ++ L EA L++ +K F + I+ +C++G ++EA +
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 207 LMKKIVAKSFAP 218
L+ ++++K P
Sbjct: 440 LINEMLSKGHCP 451
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 37/256 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ +G P V+ + MIR R +A+ +L M G PD V Y ++ + E
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKR 362
Query: 61 YVKLDELFDEMLV-LGLIPDVYTYNVYI-------------------------------- 87
V++ +L +M GL+PD TYN I
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422
Query: 88 ---NGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
+ LCK+ ++ EA +++ M+ G C P+VVT ++ C G++ KAK +++ M
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G + N +Y +L+G+ + EA ++ + + P S T+ I+ + ++G ++E
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 204 ALELMKKIVAKSFAPG 219
A ++++++V K F PG
Sbjct: 543 ACDVVREMVLKGFFPG 558
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 5 GFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G CP V+ +T ++ + A +L M G KP+ V YT +L+G+ G ++
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
E+ + P+ TY+V ++GL ++ K+ EA +V M+ G P V N LL
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+LC G +A+ M+E KG +N+ + ++ G E+ A +L++M +
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 627
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++ + +KG I EA ELMKK++ K P + ++
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%)
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ ++ +A++++ M + G +PN++ CNT + A L KA ++ M + G+ N+
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY M+ G + EA LLE+M K P ++ I+ +C++ I E +LMKK+
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 212 V 212
Sbjct: 374 A 374
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 16/243 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR++G P V+ +T +I +K ++ A + M +G P++V Y+ ++ G G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 61 YVKLDELFDEMLVLGLIPD----------------VYTYNVYINGLCKQNKVDEAIQIVD 104
K ++F+ M +PD V TY ++G CK ++V+EA +++D
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 105 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
+M GC+PN + + L+ LC+ G L +A+ V EM G L+TY ++D
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 165 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
AS +L +ML+ P + +I +C+ G +EA +LM+ + K P +
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 225 ALL 227
A++
Sbjct: 784 AMI 786
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 16/239 (6%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P ++ ++ +L + A + +MK+ G+ DV YTI++ G +
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ F+EM +G P+V TY I+ K KV A ++ ++M+ GC PN+VT + L+
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 125 LCEAGDLSKAKGVMKEM-GLKGV---------------ELNLHTYRIMLDGLVGKAEIGE 168
C+AG + KA + + M G K V N+ TY +LDG + E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 169 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
A LL+ M + P +D +I +C+ G ++EA E+ ++ F + +L+
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 3/217 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++ K R +A +L+ M +G +P+ + Y ++ G+ G + E+
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM G +YTY+ I+ K + D A +++ M++ C PNVV ++ LC+
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A +M+ M KG + N+ TY M+DG +I LLE M K P T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 188 FDNIICCMCQKGLINEA---LELMKKIVAKSFAPGAR 221
+ +I C+ G ++ A LE MK+ + G R
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 45/267 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF + ++ +I K +R A +L++M ++ P+VV YT ++ G+ G
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG- 758
Query: 61 YVKLDELFDEMLVL---GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K DE + M ++ G P+V TY I+G K++ +++++ M G PN VT
Sbjct: 759 --KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT------------------------- 152
L+ C+ G L A +++EM K HT
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEM--KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 153 ----------YRIMLDGLVGKAEIGEASLLLEEM--LKKCFYPRSSTFDNIICCMCQKGL 200
YR+++D L+ + A LLEE+ SST++++I +C
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 201 INEALELMKKIVAKSFAPGARAWEALL 227
+ A +L ++ K P +++ +L+
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLV--KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV-- 56
M K G PG + + +I + K+ D L + + + + VV I +S
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 57 --AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ G Y K + EM+ G IPD TY+ +N LC +K++ A + + M + G +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
V T ++ + C+AG + +A+ EM G N+ TY ++ + ++ A+ L E
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
ML + P T+ +I C+ G + +A ++ +++ P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 105/264 (39%), Gaps = 41/264 (15%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
F P + +T +I L + +A+ LN+M+ P+VV Y+ +L G + + +
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + M++ G P +N ++ C A +++ M+K G P V N L+G+
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 125 -----------------------------------------LCEAGDLSKAKGVMKEMGL 143
LC AG KA V++EM
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
+G + TY +L+ L +++ A LL EEM + T+ ++ C+ GLI +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 204 ALELMKKIVAKSFAPGARAWEALL 227
A + ++ P + AL+
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALI 560
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL------FDEMLVLGLIPDVYT 82
A +L +M + G P V Y I++ I + D + D L + EML G++ +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
+ + LC K ++A ++ MI G P+ T + +L LC A + A + +EM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
G+ +++TY IM+D I +A EM + P T+ +I + ++
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
A EL + ++++ P + AL+
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALI 595
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
L ++ + PD V YT ++SG+ + + + + M +P+V TY+ + G
Sbjct: 290 LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
+ ++ ++++ M+ GC P+ N+L+ A C +GD S A ++K+M G
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 153 YRIMLDGLVGKAEIGEASLL------LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
Y I++ + G + LL EML + C+C G +A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 207 LMKKIVAKSFAPGARAWEALL 227
++++++ + F P + +L
Sbjct: 470 VIREMIGQGFIPDTSTYSKVL 490
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL L ++K +P Y ++ + + EM + L D +T +
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LCK K EA+ +V++ P+ V L+ LCEA +A + M
Sbjct: 279 SLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY +L G + K ++G +L M+ + YP F++++ C G + A +L+
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 209 KKIVAKSFAPGARAWEALL 227
KK+V PG + L+
Sbjct: 396 KKMVKCGHMPGYVVYNILI 414
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P ++ F+ M+ + AL N +K+ G+ PD V YTI++ G +G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +EML G DV TYN ++GLCK+ + EA ++ + M + P+ T
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G+L A + ++M K + L++ TY +LDG +I A + +M+ K
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P ++ ++ +C KG + EA + ++++K+ P
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ G P + +T +I+ ++ A+ + N+M Q G DVV Y +L G+
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D+LF+EM L PD YT + I+G CK + A+++ M + + +VVT NT
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL + GD+ AK + +M K + +Y I+++ L K + EA + +EM+ K
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +++I C+ G ++ ++K++++ F P ++ L+
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF PGV + +I L K + A + +M + G+ PD Y +L +GD V+
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+++F +M ++PD+ ++ ++ + +D+A+ +S+ + G P+ V L+
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G +S A + EM +G +++ TY +L GL + +GEA L EM ++ +P
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
S T +I C+ G + A+EL +K+ K + LL
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 108/202 (53%), Gaps = 2/202 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ + +MK+ I+ DVV Y +L G GD E++ +M+ ++P +Y++ +
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N LC + + EA ++ D MI KP V+ CN+++ C +G+ S + +++M +G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK--CFYPRSSTFDNIICCMCQKGLINEAL 205
+ +Y ++ G V + + +A L+++M ++ P T+++I+ C++ + EA
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+++K++ + P + ++
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMI 699
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 7/237 (2%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
M+ L K+ + L+Q+++ G+ PD+V Y ++S ++G + EL + M G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
P VYTYN INGLCK K + A ++ M++ G P+ T +LL C+ GD+ + +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V +M + V +L + M+ + +A + + + P + + +I
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALL-------LHSGSDLTYSETTFAGLF 245
C+KG+I+ A+ L +++ + A + +L + +D ++E T LF
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ ++ L + +A + ++M IKP V+ ++ G G+ +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL--GCKPNVVTCNTLLGAL 125
++M+ G +PD +YN I G ++ + +A +V M + G P+V T N++L
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C + +A+ V+++M +GV + TY M++G V + + EA + +EML++ F P
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE-LFDEM 71
F +IR V+ + +A ++ G + ++ +V G +V+L ++ E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG-WVELAWGVYQEI 226
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
G+ +VYT N+ +N LCK K+++ + + + G P++VT NTL+ A G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A +M M KG ++TY +++GL + A + EML+ P S+T+ ++
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAP 218
+ C+KG + E ++ + ++ P
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVP 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G+ +V I+++ + +G K+ ++ G+ PD+ TYN I+
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+ ++EA +++++M G P V T NT++ LC+ G +AK V EM G+
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ TYR +L K ++ E + +M + P F +++ + G +++AL
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 209 KKIVAKSFAP 218
+ P
Sbjct: 399 NSVKEAGLIP 408
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
E F + G + N I L + V+ A + + + G NV T N ++ AL
Sbjct: 186 EAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNAL 245
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G + K + ++ KGV ++ TY ++ K + EA L+ M K F P
Sbjct: 246 CKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGV 305
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS--GSDLTYSETTFAG 243
T++ +I +C+ G A E+ +++ +P + + +LL+ + D+ +E F+
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 244 LFNQN 248
+ +++
Sbjct: 366 MRSRD 370
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMK--QDGIKPDVVCYTIVLSGIVAEGDYV 62
GF P + + +I V+EE A ++ +M+ Q G+ PDV Y +L G +
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ + + +M+ G+ PD TY ING Q+ + EA +I D M++ G P+
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 88/150 (58%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR++G PGV+ FT +I L + + Y +++ + G PDVVCYT++++G ++ G+
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +E+F EM G +P+V+TYN I G C K EA ++ M GC PN V +T
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
L+ L AG + +A V+K+M KG ++L
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVEKGHYVHL 467
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 2/207 (0%)
Query: 21 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
VK+ + +D +Y QM +DG PDV+ Y IV+ G +L L DEM+ G PD+
Sbjct: 235 VKQYKLIDWVY--EQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
YTYN+ ++ L NK A+ +++ M ++G +P V+ TL+ L AG L K M E
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 352
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
G ++ Y +M+ G + E+ +A + +EM +K P T++++I C G
Sbjct: 353 TVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGK 412
Query: 201 INEALELMKKIVAKSFAPGARAWEALL 227
EA L+K++ ++ P + L+
Sbjct: 413 FKEACALLKEMESRGCNPNFVVYSTLV 439
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
GF P V+ + +++ F D LY +L++M +DG PD+ Y I+L + +
Sbjct: 252 GFTPDVLTY-NIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA 310
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L + M +G+ P V + I+GL + K++ +D +K+GC P+VV ++
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
G+L KA+ + KEM KG N+ TY M+ G + EA LL+EM + P
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ ++ + G + EA E++K +V K
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K GF P + + ++ L + + AL +LN M++ G++P V+ +T ++ G+ G
Sbjct: 283 MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
DE + +G PDV Y V I G ++++A ++ M + G PNV T N+
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C AG +A ++KEM +G N Y +++ L ++ EA ++++M++K
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Query: 181 FY 182
Y
Sbjct: 463 HY 464
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 102/195 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + M++ + + A +MK+ + DVV YT V+ G G+
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +FDEM+ G++P V TYN I LCK++ V+ A+ + + M++ G +PNV T N
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L AG+ S+ + +M+ M +G E N TY +M+ +E+ +A L E+M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 181 FYPRSSTFDNIICCM 195
P T++ +I M
Sbjct: 401 CLPNLDTYNILISGM 415
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR L P F + + A+ + M + G D+ + +L +
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K ELF L D TYNV +NG C + +A++++ M++ G PN+ T NT
Sbjct: 177 VEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L AG + A EM + E+++ TY ++ G EI A + +EM+++
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSG 231
P +T++ +I +C+K + A+ + +++V + + P + L L H+G
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%)
Query: 24 ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTY 83
+R AL +L +M + GI P++ Y +L G G E F EM DV TY
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
++G ++ A + D MI+ G P+V T N ++ LC+ ++ A + +EM
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
+G E N+ TY +++ GL E L++ M + P T++ +I + + +
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 204 ALELMKKI 211
AL L +K+
Sbjct: 389 ALGLFEKM 396
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K G P + F MI + A IL+ MK++G P+V Y+ +++G G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + FDE+ GL D Y +N C+ + DEA++++ M C+ + +T N
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L L G +A ++ + G +GV LN +YRI+L+ L E+ +A L M ++
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P +T++ ++ +C+ G + ++ + PG ++W A++
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P V +++ ++ K + +A +++K+ G+K D V YT +++ G+
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L EM D TYNV + GL + + +EA+Q++D G N +
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLK 178
+L ALC G+L KA + M +G+ + T+ ++ L G EIG L+ L+
Sbjct: 414 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI--GFLR 471
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
P ++ ++ +C++ + EL+ +V+
Sbjct: 472 IGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF ++ ++ LV+ ++ + IL+QMK + + + ++ + K+
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKV 143
Query: 65 DELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIV-DSMIKLGCKPNVVTCNTLL 122
E+F+ + V+ + P + + +N L +V+ + +++ + LG +PN N L+
Sbjct: 144 MEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILV 203
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEML-KKC 180
C+ GD++ A V++EM G+ N TY ++D L + EA L E+M+ K+
Sbjct: 204 KHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEG 263
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I C+ G + A +++ + P + AL+
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+R G P + T ++ LVK+ I +M + G+ ++ Y +++ GD
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K ++L EM G+ PD++TYN I+ CK++ EA+ + D M + G PN+VT N+
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ G + +A + +E+ V N TY ++DG +I EA L E M +
Sbjct: 279 FIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
F P T+++I+ +C+ G I EA L+ ++ K P
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ + I +E R +A + ++K D + + V YT ++ G D
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMND 322
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L + M G P V TYN + LC+ ++ EA +++ M +P+ +TCNT
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A C+ D+ A V K+M G++L++++Y+ ++ G E+ A L M++K
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 181 FYPRSSTFDNII 192
F P +T+ ++
Sbjct: 443 FSPGYATYSWLV 454
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
D++ + Q++ G+KP + T++L+ +V + + ++F +M+ LG++ +++ YNV +
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ K ++A +++ M + G P++ T NTL+ C+ +A V M GV
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ TY + G + + EA+ L E +K T+ +I C+ I+EAL L
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRL 329
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ + ++ F+PG + ++L
Sbjct: 330 REVMESRGFSPGVVTYNSIL 349
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF PGV+ + ++R L ++ R +A +L +M I+PD + +++ D
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V ++ +M+ GL D+Y+Y I+G CK +++ A + + SMI+ G P T +
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + +++E +G+ ++ YR ++ + ++ A +L E M KK
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKG 512
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM 208
S F + + G + EA L
Sbjct: 513 LVGDSVIFTTMAYAYWRTGKVTEASALF 540
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + M+ G P VV Y +L + +G + + L EM + PD T N I
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N CK + A+++ MI+ G K ++ + L+ C+ +L AK + M KG
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
TY ++DG + + E + LLEE K+ + + +I +C+
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICK 494
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%)
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
K ++++I + + + G KP++ C LL +L + + K+M GV N+
Sbjct: 144 AKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANI 203
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
H Y +++ + +A LL EM +K +P T++ +I C+K + EAL + +
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 211 IVAKSFAPGARAWEALL 227
+ AP + + +
Sbjct: 264 MERSGVAPNIVTYNSFI 280
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 38/262 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF DF M+ L K DA + ++MK+ +PD+ YTI+L G E +
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN------ 114
+++DE+ EM G PDV Y + IN CK K +EAI+ + M + CKP+
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 115 -----------------------------VVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
T N L+GA C + + A + EM LKG
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V N TY I+L L+ EA + + M C P ST++ ++ C K ++ A+
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYEVYQTM--SC-EPTVSTYEIMVRMFCNKERLDMAI 424
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
++ ++ K PG + +L+
Sbjct: 425 KIWDEMKGKGVLPGMHMFSSLI 446
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I L E++ DAL + K G + Y ++ +
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKT 359
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM + G+ P+ TY++ ++ L + + EA ++ +M C+P V T ++ C
Sbjct: 360 VDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCN 416
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L A + EM KGV +H + ++ L + ++ EA EML P
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHM 476
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
F + + +G ++ +L+ K+
Sbjct: 477 FSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 97/217 (44%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F + R + + +A+ ++M++ G K + + +L + + ++FD+M
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
PD+ +Y + + G ++ + ++ M G +P+VV ++ A C+A
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A EM + + + H + +++GL + ++ +A E F + T++ ++
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
C + +A + + ++ K P AR ++ +L H
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + ++ L++ +R +A + M +P V Y I++ +
Sbjct: 363 MRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKER 419
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+++DEM G++P ++ ++ I LC +NK+DEA + + M+ +G +P +
Sbjct: 420 LDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSR 479
Query: 121 LLGALCEAGDLSKAKGVMKEM 141
L L + G K ++ +M
Sbjct: 480 LKQTLLDEGRKDKVTDLVVKM 500
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V D +IR ++E D+L I M G P V +L +V G+ V +
Sbjct: 163 PSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EML + PDV T+N+ IN LC + +++ ++ M K G P +VT NT+L C+
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G A ++ M KGV+ ++ TY +++ L I + LLL +M K+ +P T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +G + A +L+ ++++ +P + AL+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 120/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G C G + +T MI L K +A+ +LN+M +DGI PD+V Y+ +++G G
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+ + +GL P+ Y+ I C+ + EAI+I ++MI G + T N
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +LC+AG +++A+ M+ M G+ N ++ +++G E +A + +EM K
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T+ +++ +C+ G + EA + +K + A A + LL
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P V ++ +VK + L +M + I PDV + I+++ + AEG + K
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +M G P + TYN ++ CK+ + AI+++D M G +V T N L+
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC + ++K ++++M + + N TY +++G + ++ AS LL EML P
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+ +I +G EAL++ + AK P ++ LL
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G V + +I L + R +L M++ I P+ V Y +++G EG
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L +EML GL P+ T+N I+G + EA+++ M G P+ V+
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL LC+ + A+G M GV + TY M+DGL + EA +LL EM K
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +I C+ G A E++ +I +P + L+
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G+ P ++ + ++ + K+ R A+ +L+ MK G+ DV Y +++ +
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L +M + P+ TYN ING + KV A Q+++ M+ G PN VT N
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ G+ +A + M KG+ + +Y ++LDGL AE A M +
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I +C+ G ++EA+ L+ ++ P + AL+
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I + E +AL + M+ G+ P V Y ++L G+ +
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + M G+ TY I+GLCK +DEA+ +++ M K G P++VT +
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G AK ++ + G+ N Y ++ + EA + E M+ +
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+ ++ +C+ G + EA E M+ + + P +++ L+
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G P + +++ L K +A L + D V Y +L+ + G+
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI------------------ 102
K LF EM+ ++PD YTY I+GLC++ K AI
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 103 --VDSMIK----------------LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
VD M K LG P++VT N ++ G + K ++ EMG +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
NL TY I+L G + ++ + LL ++ P T +++ +C+ ++
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 205 LELMKKIVAK 214
L+++K + +
Sbjct: 849 LKILKAFICR 858
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F ++ L K + +A + M DGI P+ V + +++G G+ +K +FDEM
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+G P +TY + GLCK + EA + + S+ + + V NTLL A+C++G+L+
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
KA + EM + + + +TY ++ GL K + A L +E
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P ++ MI + + +L +M P++ Y I+L G D
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L+ +++ G++PD T + + G+C+ N ++ ++I+ + I G + + T N
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G+++ A ++K M G+ L+ T M+ L E+ ++L EM K+
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S + +I +C+ G I A + ++++A P A A++
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
M+ L + R ++ +L++M + GI P+ Y +++G+ GD + +EM+
Sbjct: 905 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P + + L K K DEA ++ M+K+ P + + TL+ C+ G++ +A
Sbjct: 965 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 1024
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII-CC 194
+ M G++L+L +Y +++ GL K ++ A L EEM F ++T+ +I
Sbjct: 1025 ELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Query: 195 MCQKGLINEALELMKKIVAKSF 216
+ ++ + A ++K ++A+ F
Sbjct: 1085 LARETAFSGADIILKDLLARGF 1106
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 2/238 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + F +I G+ A + ++M + G P Y +L G+ G +
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + + D YN + +CK + +A+ + M++ P+ T +L+
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 125 LCEAGDLSKAKGVMKEMGLKGVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC G A KE +G L N Y +DG+ + E+M P
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTF 241
T + +I + G I + +L+ ++ ++ P + +LLH S T+F
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN-ILLHGYSKRKDVSTSF 814
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD-VVCYTIVLSGIVAEGDYVKLD- 65
P + + ++ K + + + + +GI PD + C+++VL + E + +++
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG--ICESNMLEIGL 849
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
++ + G+ D YT+N+ I+ C +++ A +V M LG + TC+ ++ L
Sbjct: 850 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+++ V+ EM +G+ Y +++GL +I A ++ EEM+ P +
Sbjct: 910 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ + + G +EA L++ ++ P ++ L+
Sbjct: 970 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
K GF + + +I +EE+ AL + ++MK+ I P V + ++ G+ G
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
E FDE+ GL+PD T+N I G CK+ +V++A + + IK KP+ TCN L
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L LC+ G KA + ++ E++ TY M+ ++ EA LL EM +K
Sbjct: 598 LNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T+++ I + + G ++E EL+KK K
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +++ + K+ R D +L MK++G+ P+ V Y ++ G G + ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M ++PD+ TYN+ INGLC + E ++++D+M L +P+VVT NTL+ E
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK-KCFYPRSS 186
G +A+ +M++M GV+ N T+ I L L + + + ++E++ F P
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAK 214
T+ +I + G ++ ALE+M+++ K
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQK 445
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 7/232 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ L P V+ + +I + ++A ++ QM+ DG+K + V + I L + E
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395
Query: 61 Y----VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K+ EL D + G PD+ TY+ I K + A++++ M + G K N +
Sbjct: 396 REAVTRKVKELVD---MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T NT+L ALC+ L +A ++ +G ++ TY ++ G + ++ +A + +EM
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
K P STF+++I +C G A+E ++ P + +++L
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD---ELFDEMLVLGLIPDVYTYNV 85
AL I +M + +KP+++ +L G+V + E+FD+M+ +G+ +V T+NV
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 86 YINGLCKQNKVDEAIQIVDSMI-KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+NG C + K+++A+ +++ M+ + P+ VT NT+L A+ + G LS K ++ +M
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ N TY ++ G + EA ++E M + P T++ +I +C G + E
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
LELM + + P + L+
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLI 352
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P ++ + +I+ +K AL ++ +M Q GIK + + +L + E +
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L + G I D TY I G ++ KV++A+++ D M K+ P V T N+L+G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G A E+ G+ + T+ ++ G + + +A E +K F P
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIV 212
+ T + ++ +C++G+ +AL ++
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLI 618
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEG 59
M K+G V F ++ E + DAL +L +M + + PD V Y +L + +G
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
L EL +M GL+P+ TYN + G CK + EA QIV+ M + P++ T N
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ LC AG + + +M M ++ ++ TY ++DG EA L+E+M
Sbjct: 315 ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIV-AKSFAPGARAWEALL 227
T + + +C++ +K++V F+P + L+
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Query: 17 IRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+++L KEE+ + ++ G PD+V Y ++ + GD E+ EM G
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ + T N ++ LCK+ K+DEA +++S K G + VT TL+ + KA
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ EM + + T+ ++ GL + A +E+ + P STF++II
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 196 CQKGLINEALELMKKIVAKSFAP 218
C++G + +A E + + SF P
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKP 589
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ L L L P +++ ++ + K A+QI MI+L KPN++TCNTLL
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175
Query: 125 LCE---AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC- 180
L + +S A+ V +M GV LN+ T+ ++++G + ++ +A +LE M+ +
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T++ I+ M +KG +++ EL+ + P + L+
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Query: 13 FTDMIRFLVKEERG---------------MDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
F DM F VK ER ++A+ +L+++ + G+ D + Y V S +
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ +LF++M G PD++TYN+ I + +VDEAI I + + + CKP++++
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIIS 514
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N+L+ L + GD+ +A KEM KG+ ++ TY +++ + A L EEML
Sbjct: 515 YNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML 574
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
K P T++ ++ C+ + G EA++L K+ + P + + L
Sbjct: 575 VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+R+ G + + ++ L K+E+ A + MK+ + D YTI++ + G
Sbjct: 229 IRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTM---GR 282
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K DE LF+EM+ GL +V YN + L K VD+AIQ+ M++ GC+PN T
Sbjct: 283 IGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYT 342
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+ LL L G L + GV+ E+ + + +++Y ++ L + EA L +M
Sbjct: 343 YSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMW 399
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
++ +++ +C G EA+E++ KI K
Sbjct: 400 SFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEK 436
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P + + +I + +A+ I ++++ KPD++ Y +++ + GD
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F EM GL PDV TY+ + K +V+ A + + M+ GC+PN+VT N
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
LL L + G ++A + +M +G+ + TY ++
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
L +K+ +K + Y +L + DY K +++ E+ G D++ YN+ ++ L K
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
K A Q+ + M K C+ + T ++ + G +A G+ EM +G+ LN+
Sbjct: 251 DEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
Y ++ L + +A + M++ P T+ ++ + +G
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 78/129 (60%)
Query: 22 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
K + + AL LN MK+ GI P V+ YT ++ G V G+ K E+F EM V G +P+V+
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TYN I GLC + EA ++ M GC PN V +TL+G L +AG LS+A+ V+KEM
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 142 GLKGVELNL 150
KG ++L
Sbjct: 821 VKKGHYVHL 829
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%)
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K NK A+ ++ M ++G P+V+ TL+ +G+L KAK + +EM +KG N+
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY M+ GL E EA LL+EM + P + ++ + + G ++EA +++K++
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 212 VAK 214
V K
Sbjct: 821 VKK 823
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M +G+ P V Y I+G ++D+A ++ M G PNV T N+++ LC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
AG+ +A ++KEM +G N Y ++ L ++ EA +++EM+KK Y
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 6/230 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ P V + +IR + + AL + N+MK G +V + I++ G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG- 226
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K+DE EM +GL D+ Y I G C ++D + D +++ G P +T
Sbjct: 227 --KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT 284
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTL+ C+ G L +A + + M +GV N++TY ++DGL G + EA LL M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+K P + T++ II +C+ GL+ +A+E+++ + + P + LL
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +++ + G P + Y ++ G G + E+F+ M+ G+ P+VYTY I+GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K EA+Q+++ MI+ +PN VT N ++ LC+ G ++ A +++ M + +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFY--PRSSTFDNIICCMCQKGLINEALELMK 209
TY I+L GL K ++ EAS LL MLK Y P +++ +I +C++ +++AL++
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 210 KIVAKSFAPGARAWEALLLHS 230
+V K G R +LL+S
Sbjct: 449 LLVEK-LGAGDRVTTNILLNS 468
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L M + G +V + I+L G+ + K L EM L+PDV++YN I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C+ ++++A+++ + M GC ++VT L+ A C+AG + +A G +KEM G+E
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+L Y ++ G E+ L +E+L++ P + T++ +I C+ G + EA E+
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 209 KKIVAKSFAPGARAWEALL 227
+ ++ + P + L+
Sbjct: 306 EFMIERGVRPNVYTYTGLI 324
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 99/181 (54%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ L +MK G++ D+V YT ++ G G+ + LFDE+L G P TYN I
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G CK ++ EA +I + MI+ G +PNV T L+ LC G +A ++ M K E
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N TY I+++ L + +A ++E M K+ P + T++ ++ +C KG ++EA +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 208 M 208
+
Sbjct: 410 L 410
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 115/226 (50%), Gaps = 4/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +IR K + +A I M + G++P+V YT ++ G+ G +
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L + M+ P+ TYN+ IN LCK V +A++IV+ M K +P+ +T N LLG
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 125 LCEAGDLSKAKGVMKEMGLKG---VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
LC GDL +A ++ M LK + ++ +Y ++ GL + + +A + + +++K
Sbjct: 397 LCAKGDLDEASKLLYLM-LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T + ++ + G +N+A+EL K+I + + A++
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L KE R AL I + + + D V I+L+ + GD K EL
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ ++ ++ + TY I+G CK ++ A ++ M +P+V N LL +LC+
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L +A + +EM ++ ++ IM+DG + +I A LL M + P T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I + G ++EA+ K+V F P A +++L
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 41/284 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V +T +I L + +AL +LN M + +P+ V Y I+++ + +G
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVY---------------------------------- 86
E+ + M PD TYN+
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 87 ---INGLCKQNKVDEAIQIVDSMI-KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
I+GLCK+N++ +A+ I D ++ KLG V T N LL + +AGD++KA + K++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQIS 486
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
+ N TY M+DG + A LL +M P ++ ++ +C++G ++
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546
Query: 203 EALELMKKIVAKSFAPGARAWEALLLHS--GSDLTYSETTFAGL 244
+A L +++ + P ++ ++ S D+ +E+ G+
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P V D+ ++ L KE A + +M++D PDVV + I++ G + GD
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L M GL PD++TY+ IN K +DEAI D M+ G +P+ C++
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELN 149
+L G+ K ++K++ K + L+
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLD 668
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F+ +I L ++ R +A + +K D +PDV+ YT ++ G G+
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGE 270
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +++F EM + G+ P+VYTY++ I+ LC+ ++ A + M+ GC PN +T N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +AG K V +M G E + TY +++ + A +L M+KK
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+STF+ I + +K +N A + K++ P + L+
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 109/222 (49%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P V+ +T+++R + +A + +MK GI+P+V Y+IV+ + G +
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
++F +ML G P+ T+N + K + ++ +Q+ + M KLGC+P+ +T N L+ A
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C +L A V+ M K E+N T+ + + K ++ A + +M++ P +
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ ++ + L++ K++ K P + L+
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLV 472
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 4/186 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++++ MK ++ + +TI++ V G + F+ M G +PD +++ I+
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
L ++ + EA DS+ K +P+V+ L+ C AG++S+A+ V KEM L G+E
Sbjct: 230 NLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL- 207
N++TY I++D L +I A + +ML P + TF+N++ + G + L++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 208 --MKKI 211
MKK+
Sbjct: 349 NQMKKL 354
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 37/262 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P ++ F ++ L K + A + M+ D PD Y+I+L G E +
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPN 252
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP------- 113
K E+F EM+ G PD+ TY++ ++ LCK +VDEA+ IV SM CKP
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 114 ----------------------------NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+V N+L+GA C+A + V+KEM KG
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V N + I+L L+ + E EA + +M+K C P + T+ +I C+K + A
Sbjct: 373 VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETAD 431
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
++ K + K P + L+
Sbjct: 432 KVWKYMRKKGVFPSMHTFSVLI 453
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V F ++R + ++ +A+Y N M++ + P++V + +LS + + K E+F
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+ M PD TY++ + G K+ + +A ++ MI GC P++VT + ++ LC+A
Sbjct: 227 ENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G + +A G+++ M + Y +++ + + EA EM + + F
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
+++I C+ + ++K++ +K P +++ +L H
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ ++ E R +A+ +M++ G+K DV + ++ + +
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM G+ P+ + N+ + L ++ + DEA + MIK+ C+P+ T ++ CE
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCE 423
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++ A V K M KGV ++HT+ ++++GL + +A +LLEEM++ P T
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Query: 188 F 188
F
Sbjct: 484 F 484
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
KQ + V Y +++ Y + +L + M ++ +V T+ + + + KV
Sbjct: 126 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKV 184
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
DEAI + M K PN+V N LL ALC++ ++ KA+ V + M + + TY I+
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTP-DSKTYSIL 243
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
L+G + + +A + EM+ +P T+ ++ +C+ G ++EAL +++ +
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 217 APGARAWEALLLHSGSD 233
P + L+ G++
Sbjct: 304 KPTTFIYSVLVHTYGTE 320
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P ++R L++ +A + +M + +PD YT+V+ + +
Sbjct: 368 MKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKE 426
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
D+++ M G+ P ++T++V INGLC++ +A +++ MI++G +P+ VT
Sbjct: 427 METADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 98/177 (55%), Gaps = 3/177 (1%)
Query: 54 GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 113
++ E ++ ++ EM+ + P+V+T+NV IN LCK K+++A +++ M GC P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 114 NVVTCNTLLGALCE---AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
NVV+ NTL+ C+ G + KA V+KEM V NL T+ I++DG + +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +EML + P +++++I +C G I+EA+ + K+V+ P + AL+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 3/211 (1%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
L+KE R D Y+ +M + I+P+V + +V++ + G K ++ ++M V G P+
Sbjct: 198 LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPN 257
Query: 80 VYTYNVYINGLCK---QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 136
V +YN I+G CK K+ +A ++ M++ PN+ T N L+ + +L +
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 137 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 196
V KEM + V+ N+ +Y +++GL +I EA + ++M+ P T++ +I C
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 197 QKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ EAL++ + + P R + L+
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVK---EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
M+ G P V+ + +I K + A +L +M ++ + P++ + I++ G
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ + ++F EML + P+V +YN INGLC K+ EAI + D M+ G +PN++T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N L+ C+ L +A + + +G Y +++D +I + L EEM
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
++ P T++ +I +C+ G I A +L ++ +K
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 108/204 (52%), Gaps = 1/204 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L + +A+ + ++M G++P+++ Y +++G + ++
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F + G +P YN+ I+ CK K+D+ + + M + G P+V T N L+ LC
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G++ AK + ++ KG+ +L T+ I+++G K E +A++LL+EM K PR T
Sbjct: 449 NGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
++ ++ C++G + A + ++
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQM 531
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG---IVAEGDYVKL 64
P V F +I L K + A ++ MK G P+VV Y ++ G + G K
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D + EM+ + P++ T+N+ I+G K + + ++++ M+ KPNV++ N+L+
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G +S+A + +M GV+ NL TY +++G + EA + + + P
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I C+ G I++ L +++ + P + L+
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 8/228 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + +I K + +AL + +K G P Y +++ G
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG- 415
Query: 61 YVKLDELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K+D+ F +EM G++PDV TYN I GLC+ ++ A ++ D + G P++VT
Sbjct: 416 --KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+ L+ C G+ KA ++KEM G++ TY I++ G + + A+ + +M
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 178 K-KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
K + ++++ ++ QKG + +A L+ +++ K P +E
Sbjct: 533 KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V + +I L + A + +Q+ G+ PD+V + I++ G +G+
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCN 119
K L EM +GL P TYN+ + G CK+ + A + M K + NV + N
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
LL + G L A ++ EM KG+ N TY I+ + +V +
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P + I + K + AL +MK GI P++V L + G
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F + +GL+PD TYN+ + K ++DEAI+++ M++ GC+P+V+ N+
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 121 LLGALCEAGDLSKAKGV---MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ L +A + +A + MKEM LK + TY +L GL +I EA L E M+
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVV---TYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+K P + TF+ + C+C+ + AL+++ K++ P + ++
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ GF + +I L+K +A+ + +M +G +P + Y+ ++ G+ D
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L EM LGL P+VYT+ + I L + K++EA +I+ M GC P+VVT
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC A L AK V ++M + + TY +LD ++ EM K
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF ++ +C+ G EA + + + + P + L+
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ +G P + + M++ K +A+ +L++M ++G +PDV+ +++ +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F M + L P V TYN + GL K K+ EAI++ + M++ GC PN +T NT
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L LC+ +++ A ++ +M G ++ TY ++ GLV ++ EA +M KK
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKL 672
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
YP T ++ + + LI +A +++ + + P WE L+
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P V FT IR L + + +A IL +M +G PDVV YT+++ +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F++M PD TY ++ +D Q M K G P+VVT
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+AG+ +A + M +G+ NLHTY ++ GL+ + +A L M
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+ I + G ALE +K+ K AP A A L
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + ++ ++ L K + +L +M+ G+KP+V +TI + + G +
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ M G PDV TY V I+ LC K+D A ++ + M KP+ VT TLL
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ DL K EM G ++ T+ I++D L GEA L+ M + P
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
T++ +IC + + +++ALEL + + P A + + + G
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 3/219 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P ++ + L K R +A I +K G+ PD V Y +++ G+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L EM+ G PDV N IN L K ++VDEA ++ M ++ KP VVT NT
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL L + G + +A + + M KG N T+ + D L E+ A +L +M+
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL---ELMKKIVAKSF 216
P T++ II + + G + EA+ MKK+V F
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF 677
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ FT ++ L K +A L+ M+ GI P++ Y ++ G++
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
ELF M LG+ P YTY V+I+ K A++ + M G PN+V CN
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L +L +AG +AK + + G+ + TY +M+ EI EA LL EM++
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
P +++I + + ++EA ++ ++ P + LL G +
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + + +I L++ R DAL + M+ G+KP Y + + GD
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V E F++M G+ P++ N + L K + EA QI + +G P+ VT N
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ + G++ +A ++ EM G E ++ +++ L + EA + M +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ + + G I EA+EL + +V K P + L
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 23 EERGMDAL-YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
+ R +D++ ++M++DG PDVV +TI++ + G++ + + D M G++P+++
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TYN I GL + +++D+A+++ +M LG KP T + ++GD A ++M
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
KG+ N+ L L EA + + P S T++ ++ C + G I
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 202 NEALELMKKIVAKSFAP 218
+EA++L+ +++ P
Sbjct: 520 DEAIKLLSEMMENGCEP 536
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M F P + +I L K R +A + M G +P+ Y I+++G G+
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF M+ G+ PD+ TY+V ++ LC +VDE + + + G P+VV N
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 121 LLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ L ++ L +A + EM +G+ +L+TY ++ L + EA + E+ +
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
P TF+ +I G A + + +V F+P +E L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+ LG P + + +I L++ + A + Q+K G PDV Y +L G
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI-VDSMIKLGCKPNVVTCNT 120
+L EL+ EM + T+N+ I+GL K VD+A+ + D M P T
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L ++G L +AK + + M G N Y I+++G E A L + M+K+
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P T+ ++ C+C G ++E L K++ P
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 8/241 (3%)
Query: 16 MIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
+I LVK DAL + + D P Y ++ G+ G + +LF+ ML
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G P+ YN+ ING K + D A + M+K G +P++ T + L+ LC G + +
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKKCFYPRSSTFDNIIC 193
KE+ G+ ++ Y ++++GL + EA +L EM + P T++++I
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL----LHSGSDLTYS--ETTFAGLFNQ 247
+ G++ EA ++ +I P + AL+ L + Y+ +T G F+
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 248 N 248
N
Sbjct: 1101 N 1101
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 4/215 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKL-DELFDEMLV 73
+IR+ K A + + +D G++P + Y +++ G++ E D +++ ++F ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL-EADMIEIAQDVFLQVKS 813
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
G IPDV TYN ++ K K+DE ++ M C+ N +T N ++ L +AG++
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 134 AKGVMKE-MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A + + M + TY ++DGL + EA L E ML P + ++ +I
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G + A L K++V + P + + L+
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A Y L +M++ G + Y ++ ++ + E++ M++ G P + TY+ +
Sbjct: 172 APYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMV 231
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GL K+ +D + ++ M LG KPNV T + L AG +++A ++K M +G
Sbjct: 232 GLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
++ TY +++D L ++ A + E+M P T+
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%)
Query: 51 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+L + +G ++ +FD M + D TY L + + +A + M + G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
N + N L+ L ++ ++A V + M L+G +L TY ++ GL + +I
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
LL+EM P TF I + + G INEA E++K++ + P + L+
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+R + P V +T MI KE++ A + ++MK+ G+ P+V YT +++G G
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + EL + M G +P++YTYN I+ LCK+++ EA ++++ G + + VT
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ D+++A M G E ++ I++ + ++ E+ L + ++
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C C++G I+ AL+ + P + + +L+
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
M+R + R +A+ ++ M+ G+ P + VL V G + +FDEM V G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
++PD +Y + + G + K+ EA + + MI+ G P+ TC +L ALCE G +++A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++M G + NL + ++DGL K I +A +LEEM++ + P T +I +
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 196 CQKGLINEALELMKKIV-AKSFAPGARAWEALL 227
C++G +A L K+V + ++ P + +++
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + M+ ++ + +A L M Q G PD T++L+ + G +
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F +M+ LG P++ + I+GLCK+ + +A ++++ M++ G KPNV T L+
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 125 LCEAGDLSKA-KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ G KA + +K + + N+HTY M+ G + ++ A +L M ++ +P
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
+T+ +I C+ G A ELM + + F P + A
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P T ++ L + A++ +M G KP+++ +T ++ G+ +G
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC-KPNVVTCN 119
+ E+ +EM+ G P+VYT+ I+GLCK+ ++A ++ +++ KPNV T
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+++G C+ L++A+ + M +G+ N++TY +++G G A L+ M +
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKK 210
F P T++ I +C+K EA EL+ K
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M + G+ P V T +I L K A + L ++ D KP+V YT ++ G E
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ + LF M GL P+V TY ING CK A ++++ M G PN+ T N
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ +LC+ +A ++ + G+E + TY I++ + +I +A M K
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F + +I C++ + E+ L + +V+ P + +++
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + + I L K+ R +A +LN+ G++ D V YTI++ + D +
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F M G D+ N+ I C+Q K+ E+ ++ ++ LG P T +++
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ GD+ A M G + TY ++ GL K+ + EA L E M+ + P
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP 602
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
T + C++ A+ L++ + K + R
Sbjct: 603 EVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT 640
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+R G P V+ + +++ + A+ + + M++ G P++ Y +++G G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++++ML G P+V Y + LC+ +K EA +++ M K C P+V T N
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ LC+AG L A+ V ++M + N+ TY +LDGL I EA L E+ +
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
SST++ ++ C GL AL+L+ K++ +P
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 6/225 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P + + +I K A+YI N+M G P+VV YT ++ +
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCN 119
+ + + L + M P V T+N +I GLC ++D A ++ M + C PN+VT N
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
LL L +A + +A G+ +E+ ++GVE + TY +L G G A L+ +M+
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
P T + II C++G A +++ + + G R W
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLV-----SCGRRKWR 597
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 16/233 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS-----GI 55
M++ GF P V + +++ L K + A +L +M G PD V YT V+S G+
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
V EG +L E F+ P V YN INGLCK++ A +++ M++ G PNV
Sbjct: 232 VKEGR--ELAERFE--------PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNV 281
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
++ +TL+ LC +G + A + +M +G N++T ++ G + +A L +
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 176 MLKKC-FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M++ P ++ ++ C G I +A+ + + +P R + +L+
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 24 ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTY 83
ER ++ Y ++K+ G P V Y VL ++ E + ++ +M G P+V+TY
Sbjct: 128 ERAVEMFY---RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY 184
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
NV + LCK NKVD A +++ M GC P+ V+ T++ ++CE G + + + + +
Sbjct: 185 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-- 242
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
E + Y +++GL + + A L+ EM++K P ++ +I +C G I
Sbjct: 243 ---EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 204 ALELMKKIVAKSFAPGARAWEALL 227
A + +++ + P +L+
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLV 323
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
+ F MIR L + + Y+L QMK G + V+S G + E+F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
+ G P V YN ++ L +N++ + M + G +PNV T N LL ALC+
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ AK ++ EM KG + +Y ++ + + E L E F P S ++
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNA 251
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I +C++ A ELM+++V K +P ++ L+
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ +I L + R +A + +QM + G +P YT+++ + G K L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FDEM+ G P+V+TY V I+GLC+ K++EA + M+K P+V+T N L+ C+
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + A ++ M + + N+ T+ +++GL + +A LL+ ML P +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C++G +N A +L+ + P + A++
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 8 PGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P +T +I+ L +RG+ A + ++M G KP+V YT+++ G+ +G + +
Sbjct: 299 PSTRTYTVLIKALC--DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ +M+ + P V TYN ING CK +V A +++ M K CKPNV T N L+ L
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF--YP 183
C G KA ++K M G+ ++ +Y +++DGL + + A LL M CF P
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM--NCFDIEP 474
Query: 184 RSSTFDNIICCMCQKG 199
TF II C++G
Sbjct: 475 DCLTFTAIINAFCKQG 490
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 111/217 (51%), Gaps = 3/217 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF-DEM 71
++ ++ L K + G A +M+ DG ++ Y +++ + G Y + E+F ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG-YTEAAEMFMSKI 221
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTLLGALCEAGD 130
L +G + D + + G C+ + +A+++ D M K + C PN V+ + L+ LCE G
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
L +A G+ +MG KG + + TY +++ L + I +A L +EM+ + P T+
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I +C+ G I EA + +K+V P + AL+
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 6/234 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K+ R + A +L M++ KP+V + ++ G+ G K L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
ML GL PD+ +YNV I+GLC++ ++ A +++ SM +P+ +T ++ A C+
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G A + M KG+ L+ T ++DG+ + +A +LE ++K +
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 188 FDNIICCMCQKGL-INEALELMKKIVAKSFAPGARAWEAL---LLHSGSDLTYS 237
N+I M KG + E L ++ KI P + L L+ SG D+T S
Sbjct: 549 L-NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG-DITGS 600
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 21 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
VKEE M L ++ + G+ P VV YT ++ G++ GD + + M + G +P+V
Sbjct: 562 VKEELAM-----LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
Y Y + INGLC+ +V+EA +++ +M G PN VT ++ G L +A ++
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 141 MGLKGVELNLHTYRIMLDGLV-------GKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
M +G ELN Y +L G V E + + L E +C S + +
Sbjct: 677 MVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGG 736
Query: 194 C-----------MCQKGLINEALELMKKIVAK 214
C +C++G +E+ +L++ ++ +
Sbjct: 737 CISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 70/297 (23%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V F +++ L + + A+++L +M +G+ PD+V Y +++ G+ EG
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYIN-------------------------------- 88
+L M + PD T+ IN
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 89 ---GLCKQNKVDEAIQIVDSMIKL------------------GCK--------------- 112
G+CK K +A+ I+++++K+ GCK
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 113 --PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
P+VVT TL+ L +GD++ + +++ M L G N++ Y I+++GL + EA
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
LL M P T+ ++ G ++ ALE ++ +V + + R + +LL
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 101/205 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +T +I L ++ + +A + +M +D I P V+ Y +++G +G V EL
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M P+V T+N + GLC+ K +A+ ++ M+ G P++V+ N L+ LC
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++ A ++ M +E + T+ +++ + + AS L ML+K T
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 188 FDNIICCMCQKGLINEALELMKKIV 212
+I +C+ G +AL +++ +V
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLV 538
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 19/241 (7%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ KLG P V+ +T ++ L++ + IL MK G P+V YTI+++G+ G
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++L M G+ P+ TY V + G K+D A++ V +M++ G + N ++
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 121 LLGA--LCEAGDLSKAKGVMKEMGLKGVELNLHTYRI----------------MLDGLVG 162
LL L + G + + + ++ L+ + I ++ L
Sbjct: 692 LLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCK 751
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
+ E++ L++ +L++ + + D I+ C K + +EL+ ++ F P ++
Sbjct: 752 EGRTDESNDLVQNVLERGVFLEKA-MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKS 810
Query: 223 W 223
+
Sbjct: 811 F 811
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 115/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I FL + + A +L M + I+P+ V + +++ G+ +G+Y + +L
Sbjct: 219 PSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKL 278
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G P + Y + ++ L K+ ++DEA ++ M K KP+VV N L+ LC
Sbjct: 279 MFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCT 338
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A V+ EM +KG + N TYR+M+DG + +L ML P +T
Sbjct: 339 ECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPAT 398
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F ++ + + G ++ A +++ + K+ + G+ AW+ LL
Sbjct: 399 FVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLL 438
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ +I LV A + K ++P+ V + I++ G + + D+ ++FD
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
EML + + P V TYN I LC+ + + +A +++ MIK +PN VT L+ LC G
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ ++AK +M +M +G + L Y I++ L + I EA LLL EM K+ P ++
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYN 330
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +C + + EA ++ ++ K P A + ++
Sbjct: 331 ILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%)
Query: 55 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+V G+ K FD + L P+ ++N+ I G + + A ++ D M+++ +P+
Sbjct: 161 LVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPS 220
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
VVT N+L+G LC D+ KAK ++++M K + N T+ +++ GL K E EA L+
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
+M + P + ++ + ++G I+EA L+ ++ + P + L+ H
Sbjct: 281 DMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNH 335
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 105/211 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +I+ + + A + ++M + ++P VV Y ++ + D K L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++M+ + P+ T+ + + GLC + + +EA +++ M GCKP +V L+ L +
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + +AK ++ EM + ++ ++ Y I+++ L + + EA +L EM K P ++T
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ +I C+ + L ++ ++A P
Sbjct: 364 YRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G PG++++ ++ L K R +A +L +MK+ IKPDVV Y I+++ + E
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + EM + G P+ TY + I+G C+ D + ++++M+ P T
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ L + G+L A V++ MG K + ++ +L L
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDL 441
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 10/223 (4%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDAL-YILNQMKQDGIKPDVVCYTIVLSGIVAE-- 58
+++GF ++ +I L K R DA+ IL ++ ++ C + G++
Sbjct: 73 QEMGFRHDYPSYSSLIYKLAKS-RNFDAVDQILRLVRYRNVR----CRESLFMGLIQHYG 127
Query: 59 --GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
G K ++F ++ + + + N IN L ++++A D + +PN V
Sbjct: 128 KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSV 187
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ N L+ + D A V EM V+ ++ TY ++ L ++G+A LLE+M
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
+KK P + TF ++ +C KG NEA +LM + + PG
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M + F P ++ LV RG A + + G+ P+ Y +++
Sbjct: 145 MLEFNFTPQPKHLNRILDVLV-SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
D +LF +ML ++PDV +Y + I G C++ +V+ A++++D M+ G P+ ++
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY 263
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
TLL +LC L +A ++ M LKG +L Y M+ G + +A +L++ML
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P S ++ +I +C +G+ +E + ++++++K F+P
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + +M + + PDV Y I++ G +G EL D+ML G +PD +Y +N
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LC++ ++ EA +++ M GC P++V NT++ C A+ V+ +M G
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N +YR ++ GL + E LEEM+ K F P S + ++ C G + EA +++
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
Query: 209 KKIVAKSFAPGARAWEALL 227
+ ++ + WE ++
Sbjct: 389 EVVMKNGETLHSDTWEMVI 407
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 97/191 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + +I+ ++ + A+ +L+ M G PD + YT +L+ + + + +L
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M + G PD+ YN I G C++++ +A +++D M+ GC PN V+ TL+G LC+
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + K ++EM KG + ++ G ++ EA ++E ++K S T
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 402
Query: 188 FDNIICCMCQK 198
++ +I +C +
Sbjct: 403 WEMVIPLICNE 413
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +T ++ L ++ + +A +L +MK G PD+V Y ++ G E +
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ D+ML G P+ +Y I GLC Q DE + ++ MI G P+ N L+
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
C G + +A V++ + G L+ T+ +++ + + E + L LE+ +K+
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE 429
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQN-KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
F +ML P N ++ L + +A ++ S G PN + N L+ A C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
DLS A + +M + V ++ +Y+I++ G K ++ A LL++ML K F P
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL 261
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
++ ++ +C+K + EA +L+ ++ K P + ++L
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LGF P F+ + E+ AL + G+K + +I+L+ + EG
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +E+ + GL+P+ YN I+G C++ + A +++M K G KP+ + N
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ CE G++ A+ + +M LKGV ++ TY I++ G K E + +L+EM
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ +I C+C+ + EA + + + + +P R + L+
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I K + + +MK D I+P ++ + +L G+ G + +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM LG +PD +T+++ +G K + A+ + ++ + G K N TC+ LL ALC+
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + KA+ ++ KG+ N Y M+DG K ++ A + +E M K+ P
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ G + A + + K+ K +P + L+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + + +IR + +A +N+MK G+ P V Y I++ G + +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K ++ EM G +P+V +Y IN LCK +K+ EA + M G P V N
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G + A KEM KG+ELNL TY ++DGL ++ EA LL E+ +K
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++++I G + + L +++ P + + L+
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + I+ VK L + N+MK D I P V Y +++ G+ +
Sbjct: 175 FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAE 234
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+LFDEML L+P + TYN I+G CK +++ ++ + M +P+++T NTLL L
Sbjct: 235 QLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEMLKKCFYPR 184
+AG + A+ V+KEM G + T+ I+ DG E EA+L + E +
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG-YSSNEKAEAALGVYETAVDSGVKMN 353
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T ++ +C++G I +A E++ + +AK P + ++
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + MI ++ + A + M++ G+KPD + Y ++ G+
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ ++M + G+ P V TYN+ I G ++ + D+ I+ M G PNVV+ TL+
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ L +A+ V ++M +GV + Y +++DG K +I +A +EMLKK
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I + G ++EA +L+ +I K P + +L+
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 6/197 (3%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
IL +M+ +G P+VV Y +++ + ++ + +M G+ P V YN+ I+G C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ K+++A + M+K G + N+VT NTL+ L G LS+A+ ++ E+ KG++ ++
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY ++ G + L EEM + P T+ +++ +C K E +EL +++
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY-HLLISLCTK----EGIELTERL 655
Query: 212 VAK-SFAPGARAWEALL 227
+ S P + +L
Sbjct: 656 FGEMSLKPDLLVYNGVL 672
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++ L KE + A IL + G+ P+ V Y ++ G +GD V + M G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ PD YN I C+ +++ A + V+ M G P+V T N L+G + K
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++KEM G N+ +Y +++ L +++ EA ++ +M + P+ ++ +I
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 196 CQKGLINEALELMKKIVAK 214
C KG I +A K+++ K
Sbjct: 540 CSKGKIEDAFRFSKEMLKK 558
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L ++ + G+KPDV Y ++SG G+ + L++EM G+ P + TY++ I+ LC
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LC 644
Query: 92 KQNKVDEAIQIVDSMI-KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
+ E I++ + + ++ KP+++ N +L GD+ KA + K+M K + L+
Sbjct: 645 TK----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDK 700
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
TY ++ G + ++ E L++EM + P + T++ I+ C+
Sbjct: 701 TTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
Query: 12 DFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
DF+ ++ ++ E M +A + ++ +GI P T++L +V + +F
Sbjct: 109 DFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFL 168
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+L P + Y I K + V + +++ + M P+V N L+ LC+
Sbjct: 169 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
++ A+ + EM + + +L TY ++DG ++ + E M P TF+
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ + + G++ +A ++K++ F P A + L
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 5 GFCPGVMDFTDMIR---FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
G P V + +I F +R + ALY +MK+ GIKP + Y +++S EG
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCI-ALY--EEMKRSGIKPTLKTYHLLISLCTKEG-- 648
Query: 62 VKLDE-LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++L E LF EM L PD+ YN ++ +++A + MI+ + T N+
Sbjct: 649 IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G L + + ++ EM + +E TY I++ G + A + EM +K
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Query: 181 F 181
F
Sbjct: 766 F 766
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + +I KE G++ L + +KPD++ Y VL GD
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKE--GIELTERL--FGEMSLKPDLLVYNGVLHCYAVHGD 680
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L +M+ + D TYN I G K K+ E ++D M +P T N
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
++ CE D A +EM KG L++ ++ GL + EA +++ EM
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF + + ++ K R +A+ +LN+M +G P +V Y ++S +G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL ++M G PDV+TY ++G + KV+ A+ I + M GCKPN+ T N
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ G ++ + E+ + G+ ++ T+ +L E S + +EM +
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P TF+ +I + G +A+ + ++++ P + +L
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P ++ + +I ++ +A+ + NQM + G KPDV YT +LSG G
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+F+EM G P++ T+N +I + K E ++I D + G P++VT NTLL
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G S+ GV KEM G T+ ++ +A + ML P
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
ST++ ++ + + G+ ++ +++ ++
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG-DYVK 63
GF V +T +I R +A+ + +M++DG KP ++ Y ++L+ G + K
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 64 LDELFDEMLVLGLIPDVYTYNVYI-------------------------------NGLC- 91
+ L ++M G+ PD YTYN I N L
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 92 ---KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
K ++ EA+++++ M+ G P++VT N+L+ A G L +A + +M KG +
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY +L G ++ A + EEM P TF+ I +G E +++
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 209 KKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
+I +P W LL G + SE + G+F +
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS--GVFKE 479
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L KE R A + N +++DG DV YT ++S G Y + +F +M G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 76 LIPDVYTYNVYINGLCKQ-NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK- 133
P + TYNV +N K ++ +V+ M G P+ T NTL+ C+ G L +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQE 297
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A V +EM G + TY +LD EA +L EM+ F P T++++I
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G+++EA+EL ++ K P + LL
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ GF P + M+ + + A +L+ MK+ G P + Y ++ D
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K +E+ E+L G+ PD+ +YN I C+ ++ +A +I M G P+V+T NT
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+G+ +A GV++ M G N +TY ++DG EA L +E++
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + F I+ + + + I +++ G+ PD+V + +L+ G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +F EM G +P+ T+N I+ + ++A+ + M+ G P++ T NT
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L AL G +++ V+ EM + N TY +L EIG L EE+
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
PR+ ++ + L+ EA ++ + F+P
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 80/177 (45%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A +++K+ G PD+ ++S K + + D M G P + TYN +
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ ++ +I+ ++ G KP++++ NT++ A C + A + EM G+
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
++ TY + + EA ++ M+K P +T+++I+ C+ +EA
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 77/163 (47%)
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ F E+ G PD+ T N ++ ++ V +A ++D M + G P++ T N+L+
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ D K++ +++E+ KG++ ++ +Y ++ + +AS + EM P
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ I + EA+ +++ ++ P + +++
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 108/273 (39%), Gaps = 35/273 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ GF P F +I + A+ + +M G+ PD+ Y VL+ + G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 61 YVKLDELFDEMLVLGLIPDVYTY----NVYING--------------------------- 89
+ + +++ EM P+ TY + Y NG
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 90 ---LCKQ-NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+C + + + EA + + + G P++ T N+++ ++KA GV+ M +G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ TY ++ A+ G++ +L E+L K P +++ +I C+ + +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
+ ++ P + + +D + E
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + +I + R DA I ++M+ GI PDV+ Y + A+ + +
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
+ M+ G P+ TYN ++G CK N+ DEA V+ + L
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 110/207 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P V+ F+ +I L K + ++ +L +M++ + P+ V YT ++ + Y
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+ +M+V G+ D+ Y V ++GL K + EA + +++ PNVVT L+
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+AGDLS A+ ++ +M K V N+ TY M++G V K + EA LL +M + P
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
T+ +I + + G A+EL K++
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
+++T +I K AL +M++ G+ DVV Y +++SG++ G V D +
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKG 563
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
M G+ PD+ T+N+ +N KQ + +++ D M G KP++++CN ++G LCE G
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ +A ++ +M L + NL TYRI LD E +L ++
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I +C+ G+ +A +M + A+ F P + +L+
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 720
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 13/235 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P + F ++ AL + M + GI P+V Y ++ G+ G
Sbjct: 704 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGL 763
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++D+ EM G+ PD +TYN I+G K + ++ I MI G P T N
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-----------GKA-EIGE 168
L+ G + +A+ ++KEMG +GV N TY M+ GL KA + E
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAE 883
Query: 169 ASLLLEEML-KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
A LL+EM+ +K + P + T I + G+ +A +K+ K A + +
Sbjct: 884 AKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKKKNARSSNS 938
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 30/234 (12%)
Query: 24 ERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI---- 77
E G+ +A L++M + GI PD V Y ++ G G++V+ L DE+ L LI
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 78 ------------------------PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 113
PDV T++ IN LCK KV E ++ M ++ P
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
N VT TL+ +L +A A + +M ++G+ ++L Y +++DGL ++ EA
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +L+ P T+ ++ +C+ G ++ A ++ +++ KS P + +++
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++ P + +T ++ L K AL + +QM GI D+V YT+++ G+ GD
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ F +L +P+V TY ++GLCK + A I+ M++ PNVVT ++
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLK 178
++ + G L +A ++++M + V N TY ++DGL GK E+ A L +EM
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM--AIELSKEMRL 462
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ D ++ + + G I E L+K +V+K
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 44/250 (17%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG---DYVKLDELFD 69
F + R + ER A L+ M G+ PD + ++ G D V L ++
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSL--IYS 118
Query: 70 EMLVLGLIPDVY--------------------------------TYNVYINGLCKQNKVD 97
+M+ G+ PDV+ TYN I+GLC+ D
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLAD 178
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
EA Q + M+K+G P+ V+ NTL+ C+ G+ +AK ++ E+ ELNL T+ I+L
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILL 234
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
I EA +M+ F P TF +II +C+ G + E L++++ S
Sbjct: 235 SSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 218 PGARAWEALL 227
P + L+
Sbjct: 292 PNHVTYTTLV 301
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 109/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P + F M+ K+ L + ++MK GIKP ++ IV+ + G
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++M+++ + P++ TY ++++ K + D + ++++ G K + NT
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G KA VM +M +G + T+ ++ G + + +A M++
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +T++ II + GLI E + + ++ ++ P + AL+
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 12/246 (4%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V +I K R A+ +L + I D V Y V+SG+ G +
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEA 180
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ EM+ +G++PD +YN I+G CK A +VD + +L N++T LL +
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSS 236
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ +A ++M + G + ++ T+ +++ L ++ E LLL EM + YP
Sbjct: 237 YYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFA 242
T+ ++ + + + AL L ++V + + L+ L DL +E TF
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 243 GLFNQN 248
L N
Sbjct: 354 MLLEDN 359
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 41/261 (15%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P +M ++ L + + +A++ILNQM I P++ Y I L
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD---TSSK 655
Query: 61 YVKLDELFD--------------------------------------EMLVLGLIPDVYT 82
+ + D +F +M G IPD T
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
+N ++G + V +A+ M++ G PNV T NT++ L +AG + + + EM
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
+G+ + TY ++ G + + + EM+ P++ST++ +I G +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 203 EALELMKKIVAKSFAPGARAW 223
+A EL+K++ + +P +
Sbjct: 836 QARELLKEMGKRGVSPNTSTY 856
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T ++ L K A +I+ QM + + P+VV Y+ +++G V +G + L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M ++P+ +TY I+GL K K + AI++ M +G + N + L+ L
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
G + + KG++K+M KGV L+ Y ++D
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++ M+ G PD V + ++ G K + M+ G+ P+V TYN I
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GL + E + + M G +P+ T N L+ + G++ + + EM G+
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
TY +++ ++ +A LL+EM K+ P +ST+ +I +C+
Sbjct: 817 KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ MI VK+ +A+ +L +M+ + P+ Y V+ G+ G EL
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM ++G+ + Y + +N L + ++ E +V M+ G + + +L+ +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD A +EM +G+ ++ +Y +++ G++ ++G A + M +K P +T
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIAT 575
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
F+ ++ ++G L+L K+ + P
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPS 607
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++LG+ P V FT +IR KE R AL +L++MK + D+V Y + + G
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F E+ GL PD TY I LCK N++DEA+++ + + K P NT
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ AG +A +++ KG ++ Y +L L ++ EA + EEM KK
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKD 372
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
P ST++ +I +C+ G ++ A EL + P R
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 95/174 (54%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ ++K PD Y+I++ G++ G + ELF M G + D YN+ I+G C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K KV++A Q+++ M G +P VVT +++ L + L +A + +E K +ELN+
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
Y ++DG I EA L+LEE+++K P T+++++ + + INEAL
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 6/195 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P V+ + +I L K +R +A + + K I+ +VV Y+ ++ G G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF---GK 669
Query: 61 YVKLDELF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
++DE + +E++ GL P++YT+N ++ L K +++EA+ SM +L C PN VT
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ LC+ +KA +EM +G++ + +Y M+ GL I EA L +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 178 KKCFYPRSSTFDNII 192
P S+ ++ +I
Sbjct: 790 ANGGVPDSACYNAMI 804
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P ++ +I L+K + + MK+ G D Y IV+ G G K
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+L +EM G P V TY I+GL K +++DEA + + + NVV ++L+
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+ G + +A +++E+ KG+ NL+T+ +LD LV EI EA + + M + P
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I +C+ N+A +++ + P ++ ++
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+T +I+ R D I M PD+ + + G+ K +F+E+
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+PD +Y++ I+GL K +E ++ SM + GC + N ++ C+ G ++
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
KA +++EM KG E + TY ++DGL + EA +L EE K + ++I
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G I+EA ++++++ K P W +LL
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNV 85
A +L +MK G +P VV Y V+ G+ A+ D +LDE LF+E + +V Y+
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGL-AKID--RLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+G K ++DEA I++ +++ G PN+ T N+LL AL +A ++++A + M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
N TY I+++GL + +A + +EM K+ P + ++ +I + + G I EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L + A P + + A++
Sbjct: 783 ALFDRFKANGGVPDSACYNAMI 804
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
R G P V+ + ++ L K + +AL + +MK+D P++ Y I++ + G
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
EL D M GL P+V T N+ ++ LCK K+DEA + + M C P+ +T +L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ L + G + A V ++M N Y ++ + + ++M+ +
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
P + + CM + G + + ++I A+ F P AR++ ++L+H
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY-SILIH 560
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P V +M+ VK + + ++ M++ +P YT ++ A
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF +M LG P V+ + I G K+ +VD A+ ++D M ++V N
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ + + G + A E+ G++ + TY M+ L + EA + E + K
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + ++ +I G +EA L+++ AK P A+ +L
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ ++ +I K R +A IL ++ Q G+ P++ + +L +V + + F
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M L P+ TY + INGLCK K ++A M K G KP+ ++ T++ L +AG
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++++A + G + Y M++GL +A L EE ++
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 97/218 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P V M+ L K ++ +A + +M PD + + ++ G+ G
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+++++ML + Y I + ++ +I MI C P++ NT
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ + +AG+ K + + +E+ + + +Y I++ GL+ E L M ++
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ ++ +I C+ G +N+A +L++++ K F P
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++L P + + +I L K + A +M++ G+KP + YT ++SG+ G+
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LFD G +PD YN I GL N+ +A + + + G + TC
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV 837
Query: 121 LLGALCEAGDLSKAK---GVMKEMG 142
LL L + L +A V++E G
Sbjct: 838 LLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 25 RGMDAL-YILNQMKQDGIKPDV-VCYTIVLSGIVAEGDYVKLDELFD---EMLVLGLIPD 79
R DAL IL +M G P V C +VL + A KL E +D M P
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKAN----KLREGYDVVQMMRKFKFRPA 167
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
Y I N D + + M +LG +P V TL+ + G + A ++
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 140 EMGLKGVELNLHTYRIMLD--GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
EM ++ ++ Y + +D G VGK ++ A E+ P T+ ++I +C+
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDM--AWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
++EA+E+ + + P A+ +++ GS + E
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 94/207 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +I L K R DA + +M + + + YT ++ G ++
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +M+ PD+ N Y++ + K + ++ + + + P+ + + L+ L +
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG ++ + M +G L+ Y I++DG ++ +A LLEEM K F P T
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+ ++I + + ++EA L ++ +K
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ LVK E +AL MK+ P+ V Y I+++G+ + K
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ EM G+ P +Y I+GL K + EA + D G P+ N ++
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
L A + +E +G+ ++ T ++LD L
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V D ++ L ++ A + K GI P Y+I++ G D
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++FDEML + D+ YN ++ LCK VD ++ M LG KP+ +
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ A C+AGD+ A V+ M + N++T+ ++ L ++ +A LLL+EM++K
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+++I+ C +N A +L+ ++ P + +L
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +M G+KPD + I + GD ++ D M L+P+VYT+N I LC
Sbjct: 265 MFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLC 324
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K KVD+A ++D MI+ G P+ T N+++ C+ ++++A ++ M + H
Sbjct: 325 KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRH 384
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ-KGLINEALELMKK 210
TY ++L L+ A+ + E M ++ FYP +T+ +I + + KG + EA +
Sbjct: 385 TYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEM 444
Query: 211 IVAKSFAPGARAWEAL 226
++ + P + E L
Sbjct: 445 MIDEGIPPYSTTVEML 460
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G P ++ ++R + A + ++M + D++ Y +L + GD
Sbjct: 202 FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDG 261
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
++F EM LGL PD Y++ ++I+ C V A +++D M + PNV T N ++
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ + A ++ EM KG + TY ++ E+ A+ LL M + P
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ ++ + + G + A E+ + + + F P + ++
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 99/202 (49%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A N+M + GIKP V +L + + E F + G++P TY++ +
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G + A ++ D M++ C +++ N LL ALC++GD+ + +EMG G++
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ +++ I + ++ A +L+ M + P TF++II +C+ +++A L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 208 MKKIVAKSFAPGARAWEALLLH 229
+ +++ K P + +++ +
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAY 357
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ P V F +I+ L K E+ DA +L++M Q G PD Y +++ +
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L M +PD +TYN+ + L + + D A +I + M + P V T
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 121 LLGALC-EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
++ L + G L +A + M +G+ T ++ + LVG ++ +L +M
Sbjct: 424 MIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 12/221 (5%)
Query: 3 KLGFCPGVMDFTDMI----RFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVA 57
+LG P V+ + +I RF+ G+D Y + +M++ GI+PDV Y ++SG
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFI-----GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAK 95
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVV 116
++ +LFDEML GL PD+++YN ++ K + EA +I+ I L G P +
Sbjct: 96 NLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGID 155
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T N LL ALC++G A + K + + V+ L TY I+++GL +G ++ E+
Sbjct: 156 TYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
K + P + T+ ++ + I + L+L K+ + +
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELF---DEMLVLGLIPDVYTYNVYINGLCKQNKV 96
G+ PDV+ Y ++ G ++ +DE + M G+ PDV TYN I+G K +
Sbjct: 43 GVLPDVITYNTLIKGYTR---FIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE-MGLKGVELNLHTYRI 155
+ +Q+ D M+ G P++ + NTL+ + G +A ++ E + L G+ + TY I
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNI 159
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+LD L A L + LK P T++ +I +C+ + +M+++
Sbjct: 160 LLDALCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 216 FAPGARAWEALL 227
+ P A + +L
Sbjct: 219 YTPNAVTYTTML 230
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP-DVVCYTIVLSGIVAEG 59
M+K G+ ++ L+K R +A ++++ + G + D+V Y +L+ +G
Sbjct: 249 MKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDG 308
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +D+L +E+ + GL PD YT+ + +NGL A + + + ++G +P+VVTCN
Sbjct: 309 NLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCN 368
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLK 144
L+ LC+AG + +A + M ++
Sbjct: 369 CLIDGLCKAGHVDRAMRLFASMEVR 393
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +M + +I L K R +++ ++K+ G P+ V YT +L K +L
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP-NVVTCNTLLGALC 126
F +M G D + ++ L K + +EA + + +++ G + ++V+ NTLL
Sbjct: 246 FLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF 305
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ G+L +++E+ +KG++ + +T+ I+++GL+ G A L + + P
Sbjct: 306 KDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVV 365
Query: 187 TFDNIICCMCQKGLINEALEL 207
T + +I +C+ G ++ A+ L
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRL 386
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ + L + + LG++PDV TYN I G + +DEA + M + G +P+V T N+L+
Sbjct: 31 RAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLI 90
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEMLKKCF 181
+ L++ + EM G+ ++ +Y ++ GEA +L E++
Sbjct: 91 SGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGL 150
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T++ ++ +C+ G + A+EL K + ++
Sbjct: 151 VPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
N+ +N LCK ++ A ++ I+LG P+V+T NTL+ + +A V + M
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G+E ++ TY ++ G + L +EML P +++ ++ C + G E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 204 ALELMKK-IVAKSFAPGARAWEALL 227
A +++ + I PG + LL
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILL 161
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQ-MKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G P + + ++ K R +A IL++ + G+ P + Y I+L + G
Sbjct: 113 GLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDN 172
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
ELF L + P++ TYN+ INGLCK +V ++ + K G PN VT T+L
Sbjct: 173 AIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+ + K + +M +G + ++ L+ EA + E+++
Sbjct: 232 MYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS 291
Query: 184 RS-STFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ +++ ++ + G ++ +L+++I K P
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++K G+ P + +T M++ K +R L + +MK++G D V+S ++ G
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 61 YVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ E E++ G D+ +YN +N K +D +++ + G KP+ T
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ L G+ A+ + +G G++ ++ T ++DGL + A L M +
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR 393
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T+ +++ +C+ G + A +L+ K + A A+L
Sbjct: 394 DEF----TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVL 437
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++ F + FT ++ + + M+A Y+L QM + G +PD+V YT +LSG G
Sbjct: 245 RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L +M G P+ Y V I LCK ++++EA+++ M + C+ +VVT L+
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ G + K V+ +M KG+ + TY ++ K E L+E+M + ++
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
P ++ +I C+ G + EA+ L ++ +PG
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P ++D+T+++ + DA +L M++ G +P+ CYT+++ +
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F EM DV TY ++G CK K+D+ ++D MIK G P+ +T
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ A + + +M++M ++ Y +++ E+ EA L EM +
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P TF +I + +G + EA + K++V +
Sbjct: 458 LSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 8/207 (3%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG---IKPDVVCYTIVLSGIVAEGDYV 62
+C + + M++ L K + ++ +M+++ I+P++ +VL A D V
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELF---VVLVQRFASADMV 199
Query: 63 KLD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
K E+ DEM G PD Y + ++ LCK V +A ++ + M ++ N+ +L
Sbjct: 200 KKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSL 258
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L C G + +AK V+ +M G E ++ Y +L G ++ +A LL +M ++ F
Sbjct: 259 LYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Query: 182 YPRSSTFDNIICCMCQKGLINEALELM 208
P ++ + +I +C+ + EA+++
Sbjct: 319 EPNANCYTVLIQALCKVDRMEEAMKVF 345
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 112/290 (38%), Gaps = 86/290 (29%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ GF P +T +I+ L K +R +A+ + +M++ + DVV YT ++SG G
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 61 ----YVKLD-------------------------------ELFDEMLVLGLIPDVYTYNV 85
Y+ LD EL ++M + PD+ YNV
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I CK +V EA+++ + M + G P V T ++ L G L +A KEM +G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 146 V--------------------------------------ELNLHTYRIMLDGLVGKAEIG 167
+ ELN+ ++ I + L K
Sbjct: 493 LFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEK 552
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
EA EM++ F P+ TF ++ KGL KK+ + FA
Sbjct: 553 EACSYCIEMIEMDFMPQPDTFAKLM-----KGL--------KKLYNREFA 589
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
P+++ V + + V +AI+++D M K G +P+ LL ALC+ G + A +
Sbjct: 183 PELFV--VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
++M ++ +NL + +L G ++ EA +L +M + F P + N++
Sbjct: 241 FEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYAN 299
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALL 227
G + +A +L++ + + F P A + L+
Sbjct: 300 AGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G P + +++ L K+ A +L+++ G+ P++V YT +L G VA GD
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ +EML G PD TY V ++G CK + EA ++D M K +PN VT ++
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ +A+ + EM + + ++D L ++ EA L +MLK P
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 184 RSSTFDNIICCMCQKGLINEALELM 208
++ +I +C++G + EA +L
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLF 389
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYIL--NQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
G V ++ L++ +R D ++ + N + GI P++ +++ + + D
Sbjct: 149 FGVKRSVRSLNTLLNVLIQNQR-FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
++ DE+ +GL+P++ TY + G + ++ A ++++ M+ G P+ T L
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C+ G S+A VM +M +E N TY +M+ L + + GEA + +EML++ F
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P SS +I +C+ ++EA L +K++ + P
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P + + MIR L KE++ +A + ++M + PD V+ + +
Sbjct: 287 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDH- 345
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K+DE L+ +ML +PD + I+ LCK+ +V EA ++ D K G P+++T
Sbjct: 346 --KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLT 402
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTL+ +CE G+L++A + +M + + N TY ++++GL + E +LEEML
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 462
Query: 178 KKCFYPRSSTF 188
+ +P +TF
Sbjct: 463 EIGCFPNKTTF 473
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P ++ +T ++ V A +L +M G PD YT+++ G G + +
Sbjct: 220 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ D+M + P+ TY V I LCK+ K EA + D M++ P+ C ++
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALCE + +A G+ ++M + ++ L + + EA L +E +K P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIP 398
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I MC+KG + EA L + + P A + L+
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
+ +I +L KE R +A + ++ ++ I P ++ Y +++G+ +G+ + L+D+M
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
P+ +TYNV I GL K V E +++++ M+++GC PN T L L + G
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEED 488
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
A ++ M + +++ ++ + L G E+ + L L+E+L +
Sbjct: 489 AMKIV-SMAVMNGKVDKESWELFLKKFAG--ELDKGVLPLKELLHE 531
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P + F ++ L K+ R DA + + M GI P+ V YTI++SG+ G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD---------------- 104
+LF EM G PD +N ++G CK ++ EA +++
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 105 -------------------SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+M+K KP+++ L+ L +AG + A ++ M KG
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ + + Y ++ L G+ + E L EM + +P + T +IC MC+ GL+ EA
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
E+ +I +P + AL+
Sbjct: 429 EIFTEIEKSGCSPSVATFNALI 450
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEE-RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M++ P V + ++R +++EE M A + N+M + P++ + I++ G+ +G
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
++FD+M G+ P+ TY + I+GLC++ D+A ++ M G P+ V N
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
LL C+ G + +A +++ G L L Y ++DGL +A L MLKK
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + +I + + G I +AL+L+ + +K +P + A++
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 20 LVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
++ E+ G D + L ++K G+ D C+ +++S G K E F M P
Sbjct: 101 MLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRP 160
Query: 79 DVYTYNVYINGLCKQNKVDE-AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
DV+TYNV + + ++ A + + M+K C PN+ T L+ L + G S A+ +
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
+M +G+ N TY I++ GL + +A L EM YP S + ++ C+
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK 280
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLFNQN 248
G + EA EL++ F G R + +L+ L T + +A + +N
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P ++ +T +I+ L K + DAL +L+ M GI PD CY V+ + G
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L EM PD T+ + I +C+ V EA +I + K GC P+V T N
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 121 LLGALCEAGDLSKAKGVMKEMGL-KGVELNL---HTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ LC++G+L +A+ ++ +M + + L L H+ D +V I +A L
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHF 508
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +++ +I C+ G I+ AL+L+ + K +P + + L+
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K GF G+ ++ +I L + R A + M + IKPD++ YTI++ G+ G
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L M G+ PD Y YN I LC + ++E + M + P+ T L+
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
++C G + +A+ + E+ G ++ T+ ++DGL E+ EA LLL +M
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG------ 54
+ K G P V F +I L K +A +L++M+ +P + + SG
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RPASLFLRLSHSGNRSFDT 491
Query: 55 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+V G +K G PD+ +YNV ING C+ +D A+++++ + G P+
Sbjct: 492 MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPD 551
Query: 115 VVTCNTLLGALCEAGDLSKA 134
VT NTL+ L G +A
Sbjct: 552 SVTYNTLINGLHRVGREEEA 571
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V + +I L KE + +A + M+ G+ PD + Y +++ G+ GD
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E ML L+P+V +NV I+G + A+ +++ M+ G KPNV T N
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G L A V EM + + TY ++L + A L +EML++
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
P T+ ++ +C KG + +A L+ +I A
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQA 538
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL++ +M G+ P ++ + +L+G+ G K D L EM +G P+ +YN I
Sbjct: 140 ALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK 199
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG--------------DLSKA 134
GLC N VD+A+ + ++M K G +PN VTCN ++ ALC+ G D S+A
Sbjct: 200 GLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA 259
Query: 135 KG-------------------------VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
V KEM K V + Y +++ GL + A
Sbjct: 260 NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +M+K+ P T++ +I +C++G +EA +L + AP +++ ++
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVII 377
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 27 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
+ AL + +M Q + D V Y +++ G+ + G+ V +M+ G+ PDV+TYN
Sbjct: 282 VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK----------- 135
I+ LCK+ K DEA + +M G P+ ++ ++ LC GD+++A
Sbjct: 342 ISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSL 401
Query: 136 ------------------------GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 171
V+ M GV+ N++T ++ G V + +A
Sbjct: 402 LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWW 461
Query: 172 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ EM +P ++T++ ++ C G + A +L +++ + P
Sbjct: 462 VKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQP 508
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 39/266 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP----------------- 43
MR++G P + + +I+ L ALY+ N M + GI+P
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 44 ----------------------DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
D+V TI++ G+ V+ E++ EM + D
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
YNV I GLC + A + M+K G P+V T NTL+ ALC+ G +A + M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
GV + +Y++++ GL ++ A+ L MLK P ++ +I + G
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
+ AL ++ +++ P AL+
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALI 447
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +LN M G+KP+V ++ G V G + + +EM + PD TYN+ +
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
C + A Q+ D M++ GC+P+++T L+ LC G L KA+ ++ + G+ +
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+ + I+ GEA L+ ++ L
Sbjct: 544 DHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
LC Q K+D A+ + MI G P ++T N LL LC+AG + KA G+++EM G N
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI-NEALELM 208
+Y ++ GL + +A L M K P T + I+ +CQKG+I N +L+
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLL 250
Query: 209 KKIVAKSFA 217
++I+ S A
Sbjct: 251 EEILDSSQA 259
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V +I VK R +DA ++ N+M+ I PD Y ++L G
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+L+DEML G PD+ TY + GLC + ++ +A ++ + G
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P V +I L +AL + + M + G++PD V Y I+ G G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN-VVTCNTL 121
E+ +ML GL PDV TY + + G C+ +D + ++ M+ G + N ++ C+ +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L LC+ G + +A + +M G+ +L Y I++ GL + A L +EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
P S T ++ +CQKG++ EA L+ +++
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ ++ L ++++ DA+ L + I P VV + ++SG G F +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
GL+P VY++N+ INGLC + EA+++ M K G +P+ VT N L G +S
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A V+++M KG+ ++ TY I+L G I +LL++ML + F ++II
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSII 364
Query: 193 CC------MCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
C +C+ G I+EAL L ++ A +P A+ ++++H
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY-SIVIH 406
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 29 ALYILNQMKQDGIKPD-VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
L +L M G + + ++ +++LSG+ G + LF++M GL PD+ Y++ I
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+GLCK K D A+ + D M PN T LL LC+ G L +A+ ++ + G
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L++ Y I++DG I EA L + +++ P +TF+++I C+ I EA ++
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ I AP ++ L+
Sbjct: 526 LDVIKLYGLAPSVVSYTTLM 545
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 12/235 (5%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V F +I K + +A IL+ +K G+ P VV YT ++ G+ +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK------------ 112
DEL EM G+ P TY+V GLC+ K + ++ I CK
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
P+ +T NT++ LC LS A ++ M + ++ + TY I++D L I +A
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + ++ + +I C KG A++L +++ + F R + A++
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM---- 71
M+ L K R +AL + NQMK DG+ PD+V Y+IV+ G+ G + L+DEM
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 72 ----------LVLGLIP---------------------DVYTYNVYINGLCKQNKVDEAI 100
L+LGL D+ YN+ I+G K ++EA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ +I+ G P+V T N+L+ C+ ++++A+ ++ + L G+ ++ +Y ++D
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
L EM + P + T+ I +C+ ++++ + + G
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608
Query: 221 RAWEA 225
R E+
Sbjct: 609 RDMES 613
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 15 DMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
DM+ FL R +D +LYIL +MK + Y VL + + D+++D V
Sbjct: 128 DMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY------HFRETDKMWD---V 178
Query: 74 LGLIPDV--YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
I D +TY+ ++GLC+Q K+++A+ + + P+VV+ N+++ C+ G +
Sbjct: 179 YKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
AK + G+ +++++ I+++GL I EA L +M K P S T++ +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
G+I+ A E+++ ++ K +P + LL
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 5 GFCPGVMDFTDMIRFLVK--EERGMDALYILNQMKQDGIKPDVVCYTIVLSG-------- 54
G P V+ +T ++ + +D L +MK +GI P V Y+++ G
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 55 ----IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
++ E + K + +M G+ PD TYN I LC+ + A ++ M
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
+ T N L+ +LC G + KA + + + V L+ Y ++ K + A
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
L ++L + F + +I +C++ L+N
Sbjct: 711 KLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K P F I K R +AL+ + +MK G +P V+ YT ++ + +++
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K+ E+ EM G P+ TY ++ L Q + +EA+++ M + GCKP+ + N L+
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 123 GALCEAGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L AG L +A+ V + EM GV +N TY M+ E +A LL+EM
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 182 -YPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T+ ++ ++G + E +L+K++V K
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P V+ +T +IR ++ + +L++M+ +G P+ + YT ++S + A+ +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTCN 119
+ + + M G PD YN I+ L + +++EA ++ M +LG N T N
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++ C + KA ++KEM + ++HTY+ +L + ++ E LL+EM+
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 179 KCFYP-RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
K ST+ +I +C+ + A L ++++++ P R
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+EA+ I D + + G + N + N LL LC+ + +A+ V+ ++ + N HT+ I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ G + EA ++EM F P ++ II C CQ+ + E++ ++ A
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 217 APGA 220
P +
Sbjct: 291 PPNS 294
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 15 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
D ++ V+ RG D L LN + + ++ G++ + +FD +
Sbjct: 138 DRMKEFVERMRG-DKLVTLNTVAK------------IMRRFAGAGEWEEAVGIFDRLGEF 184
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
GL + + N+ ++ LCK+ +V++A ++V +K PN T N + C+A + +A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
++EM G + +Y ++ + E + +L EM P S T+ I+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 195 MCQKGLINEALELMKKIVAKSFAPGA 220
+ + EAL + ++ P +
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDS 329
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K P F I K R +AL+ + +MK G +P V+ YT ++ + +++
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K+ E+ EM G P+ TY ++ L Q + +EA+++ M + GCKP+ + N L+
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 123 GALCEAGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L AG L +A+ V + EM GV +N TY M+ E +A LL+EM
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 182 -YPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T+ ++ ++G + E +L+K++V K
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P V+ +T +IR ++ + +L++M+ +G P+ + YT ++S + A+ +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTCN 119
+ + + M G PD YN I+ L + +++EA ++ M +LG N T N
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++ C + KA ++KEM + ++HTY+ +L + ++ E LL+EM+
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 179 KCFYP-RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
K ST+ +I +C+ + A L ++++++ P R
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+EA+ I D + + G + N + N LL LC+ + +A+ V+ ++ + N HT+ I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ G + EA ++EM F P ++ II C CQ+ + E++ ++ A
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 217 APGA 220
P +
Sbjct: 291 PPNS 294
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 15 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
D ++ V+ RG D L LN + + ++ G++ + +FD +
Sbjct: 138 DRMKEFVERMRG-DKLVTLNTVAK------------IMRRFAGAGEWEEAVGIFDRLGEF 184
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
GL + + N+ ++ LCK+ +V++A ++V +K PN T N + C+A + +A
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
++EM G + +Y ++ + E + +L EM P S T+ I+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 195 MCQKGLINEALELMKKIVAKSFAPGA 220
+ + EAL + ++ P +
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDS 329
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 107/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ I K AL + MK+D + P+VV +T ++ G GD L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ EM + + +V TY I+G CK+ ++ A ++ M++ +PN + T++ +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD A + +M +G+ L++ Y +++ GL G ++ EA+ ++E+M K P
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F ++ + G + A+ + K++ + F P A ++
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 4/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ P F ++ F+ K + A I++ M + G +PDV+ Y ++ G GD
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 65 DELFDEMLV-LGLI--PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ + + G I PD+ ++N NG K +DE + M+K C PNVVT +T
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTW 169
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C++G+L A M + N+ T+ ++DG ++ A L +EM +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I C+KG + A E+ ++V P + + ++
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR++ V+ +T +I K+ A + ++M +D ++P+ + YT ++ G GD
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +ML G+ D+ Y V I+GLC K+ EA +IV+ M K P++V T
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ A ++G + A + ++ +G E ++ M+DG+ ++ EA + C
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF------C 397
Query: 181 FYPRSST-FDNIICCMCQKGLINEALELMKKIVAKSFAPGA---RAWEALLLHSGS 232
+ + +I +C++G E L KI P +W A L G+
Sbjct: 398 IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 30/209 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC------------- 47
M K P ++ FT M+ K R A+ + +++ + G +PDVV
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 48 -----------------YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
YT+++ + EGD+++++ LF ++ GL+PD + Y +I GL
Sbjct: 389 LHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
CKQ + +A ++ M++ G +++ TL+ L G + +A+ V EM G+ +
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ +++ + + AS LL +M ++
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F + K + +D +++ + P+VV Y+ + G+ +
Sbjct: 127 PDIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M L P+V T+ I+G CK ++ A+ + M ++ NVVT L+ C+
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G++ +A+ + M VE N Y ++DG + + A L +ML + +
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ II +C G + EA E+++ + P
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 97/205 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ P V+ FT +I K A+ + +M++ + +VV YT ++ G +G+
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E++ M+ + P+ Y I+G ++ D A++ + M+ G + ++
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC G L +A ++++M + ++ + M++ + A + +++++
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
F P +I + + G ++EA+
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAI 393
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 108/250 (43%), Gaps = 30/250 (12%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +T +I + +A+ L +M G++ D+ Y +++SG+ G + E+
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT------- 120
++M L+PD+ + +N K ++ A+ + +I+ G +P+VV +T
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 121 -----------------------LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
L+ ALC+ GD + + + ++ G+ + Y +
Sbjct: 386 NGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
GL + + +A L M+++ + +I + KGL+ EA ++ +++ +
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Query: 218 PGARAWEALL 227
P + ++ L+
Sbjct: 506 PDSAVFDLLI 515
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +T I L K+ +DA + +M Q+G+ D++ YT ++ G+ ++G V+
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
++FDEML G+ PD +++ I K+ + A ++ M + G
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P V +I L +AL + + M + G++PD V Y I+ G G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN-VVTCNTL 121
E+ +ML GL PDV TY + + G C+ +D + ++ M+ G + N ++ C+ +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L LC+ G + +A + +M G+ +L Y I++ GL + A L +EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
P S T ++ +CQKG++ EA L+ +++
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ ++ L ++++ DA+ L + I P VV + ++SG G F +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
GL+P VY++N+ INGLC + EA+++ M K G +P+ VT N L G +S
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A V+++M KG+ ++ TY I+L G I +LL++ML + F ++II
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSII 364
Query: 193 CC------MCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
C +C+ G I+EAL L ++ A +P A+ ++++H
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY-SIVIH 406
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 29 ALYILNQMKQDGIKPD-VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
L +L M G + + ++ +++LSG+ G + LF++M GL PD+ Y++ I
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+GLCK K D A+ + D M PN T LL LC+ G L +A+ ++ + G
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L++ Y I++DG I EA L + +++ P +TF+++I C+ I EA ++
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ I AP ++ L+
Sbjct: 526 LDVIKLYGLAPSVVSYTTLM 545
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 12/235 (5%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V F +I K + +A IL+ +K G+ P VV YT ++ G+ +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK------------ 112
DEL EM G+ P TY+V GLC+ K + ++ I CK
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
P+ +T NT++ LC LS A ++ M + ++ + TY I++D L I +A
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + ++ + +I C KG A++L +++ + F R + A++
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM---- 71
M+ L K R +AL + NQMK DG+ PD+V Y+IV+ G+ G + L+DEM
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 72 ----------LVLGLIP---------------------DVYTYNVYINGLCKQNKVDEAI 100
L+LGL D+ YN+ I+G K ++EA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ +I+ G P+V T N+L+ C+ ++++A+ ++ + L G+ ++ +Y ++D
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
L EM + P + T+ I +C+ ++++ + + G
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608
Query: 221 RAWEA 225
R E+
Sbjct: 609 RDMES 613
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 15 DMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
DM+ FL R +D +LYIL +MK + Y VL + + D+++D V
Sbjct: 128 DMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY------HFRETDKMWD---V 178
Query: 74 LGLIPDV--YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
I D +TY+ ++GLC+Q K+++A+ + + P+VV+ N+++ C+ G +
Sbjct: 179 YKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
AK + G+ +++++ I+++GL I EA L +M K P S T++ +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
G+I+ A E+++ ++ K +P + LL
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 5 GFCPGVMDFTDMIRFLVK--EERGMDALYILNQMKQDGIKPDVVCYTIVLSG-------- 54
G P V+ +T ++ + +D L +MK +GI P V Y+++ G
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 55 ----IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
++ E + K + +M G+ PD TYN I LC+ + A ++ M
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
+ T N L+ +LC G + KA + + + V L+ Y ++ K + A
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
L ++L + F + +I +C++ L+N
Sbjct: 711 KLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 3/231 (1%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
L + + AL + +M G P Y V+ + E L L + + L +PD
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
V TY + +N LCK+N D A I+D+M +LG +P V ++++G+L + G + +A+
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
+M G++ + Y IM++ I EA+ L+EE++K P S T+ +I + G
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 200 LINEALELMKKIVAKSFAPGARAWEALLLH--SGSDLTYSETTFAGLFNQN 248
++ + + + K++ +P + AL+ H D +S T F GL +N
Sbjct: 667 MMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLF-GLMGEN 716
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG P V ++ +I L K+ R ++A +M + GI+PD + Y I+++ G
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR 632
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +EL +E++ L P +TY V I+G K +++ Q +D M++ G PNVV
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
L+G + GD + + MG ++ + Y +L GL
Sbjct: 693 LIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 114/277 (41%), Gaps = 42/277 (15%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG---------- 54
G P V+ +T +I +K+ + + M ++ IK D + Y +LSG
Sbjct: 682 GLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKK 741
Query: 55 ---IVAEGDYVKLDELFDE-------------------MLVLG-----LIPDVYTYNVYI 87
IV G L L M V+G +IP++Y +N I
Sbjct: 742 RQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTII 801
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G C ++DEA ++SM K G PN+VT L+ + EAGD+ A + + E
Sbjct: 802 TGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCE 858
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ Y +L GL +A L+ EM K P +++ ++ C+C L EA+++
Sbjct: 859 PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKV 918
Query: 208 MKKIVAKSFAPGA--RAWEALLLHSGSDLTYSETTFA 242
+K + A P + W +L L + FA
Sbjct: 919 VKDMAALDIWPRSINHTWLIYILCEEKKLREARALFA 955
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 84/166 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++L F P V + ++ L K+ A I++ M++ G++P V Y+ ++ + +G
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ +E F +ML G+ PD Y + IN + ++DEA ++V+ ++K +P+ T
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
L+ + G + K + +M G+ N+ Y ++ + K +
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL---GLIPDVYTYNV 85
A+ ++ ++K+ I P++ + +++G A G +LDE ++ + + G++P++ TY +
Sbjct: 779 AMEVIGKVKK-SIIPNLYLHNTIITGYCAAG---RLDEAYNHLESMQKEGIVPNLVTYTI 834
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+ + ++ AI + + C+P+ V +TLL LC+ A +M EM G
Sbjct: 835 LMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N +Y +L L EA ++++M +PRS +I +C++ + E
Sbjct: 892 INPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLRE-- 949
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSG-SDLTYSETTFAGLFNQN 248
ARA A+++ SG S L ++ + NQN
Sbjct: 950 --------------ARALFAIMVQSGRSLLNCTKPGLLKMLNQN 979
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + + M+ DG D V YT ++ + + L+ M+ D +N I
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA-KGVMKEMGLKGV 146
+G K +D+ + MIK G + NV T + ++G+ C+ G++ A + + G + +
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDI 374
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
N+H Y ++ G K + +A LL ML P T+
Sbjct: 375 SRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 9/225 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M K G V + MI KE AL + +N + I +V CYT ++ G +G
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
K +L ML G++PD TY V + L K +++ A+ I+ S++ GC N +
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 120 TLLGALCEAGDLS-KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L G++ K + ++ E+ K L ++ L + A +E+M+
Sbjct: 453 DL-------GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVN 505
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
P +++++I C+ Q+ +I + L+ I F P +
Sbjct: 506 LGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTY 550
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + MI + R +A ++ ++ + ++P YT+++SG V G
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM 667
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + D+ML GL P+V Y I K+ + + M + K + + T
Sbjct: 668 MEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYIT 727
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM--LK 178
LL L A K + V+ E G + + L + ++ G S +E + +K
Sbjct: 728 LLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK 787
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P + II C G ++EA ++ + + P + L+
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILM 836
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ LFD M V G D Y + CK N + A+++ M++ + + NTL+
Sbjct: 257 EALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHG 316
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEMLKKCFYP 183
+ G L K + + +M KGV+ N+ TY IM+ + + A L + +
Sbjct: 317 FMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISR 376
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ N+I +KG +++A++L+ +++ P + LL
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI----KPDVVCYTIVLSGIV 56
MR+ G P ++ F I L KE + +DA I + M+ D +P+ + Y ++L G
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 57 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
G LF+ + + + +YN+++ GL + K EA ++ M G P++
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ N L+ LC+ G LS AK ++ M GV + TY +L G ++ A LL+EM
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
++ P + T + ++ + + G I+EA EL++K+ K +
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
PD++ Y+ +L+G+ G + + LF EM+ L PD YN++I+ CKQ K+ A ++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
+ M K GC ++ T N+L+ L + + G+M EM KG+ N+ TY + L
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
++ +A+ LL+EM++K P +F +I C+ + A E+ + V+
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 23/254 (9%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + + ++ L K DA I+ MK++G+ PD V Y +L G + G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L EM+ +P+ YT N+ ++ L K ++ EA +++ M + G + VTCN
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG-------------------VELN----LHTYRIML 157
++ LC +G+L KA ++K M + G +E N L TY +L
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
+GL EA L EM+ + P S ++ I C++G I+ A ++K + K
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591
Query: 218 PGARAWEALLLHSG 231
+ +L+L G
Sbjct: 592 KSLETYNSLILGLG 605
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P F ++R K L +LN M+ G+ P+ V Y ++S EG
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGR 232
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM---IKLGC-KPNVV 116
+++ ++M GL+PD+ T+N I+ LCK+ KV +A +I M LG +PN +
Sbjct: 233 NDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T N +L C+ G L AK + + + +L +Y I L GLV + EA +L++M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P +++ ++ +C+ G++++A ++ + P A + LL
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++ L K R +A +L +M + G D V I++ G+ G+ K E+ M V G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 76 -----------------------LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 112
+PD+ TY+ +NGLCK + EA + M+ +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
P+ V N + C+ G +S A V+K+M KG +L TY ++ GL K +I E L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++EM +K P T++ I +C+ + +A L+ +++ K+ AP +++ L+
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 120/234 (51%), Gaps = 5/234 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + + ++ +E R D+ ++ +M+++G+ PD+V + +S + EG
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 61 YVKLDELFDEMLV---LGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
+ +F +M + LGL P+ TYN+ + G CK +++A + +S+ + ++
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ N L L G +A+ V+K+M KG+ ++++Y I++DGL + +A ++ M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
+ P + T+ ++ C G ++ A L+++++ + P A +LLHS
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN-ILLHS 440
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
KP V Y ++L + E + L+ +M++ G+ P YT+N+ I LC + VD A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+ D M + GCKPN T L+ C+AG K ++ M GV N Y ++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
+ ++ ++E+M ++ P TF++ I +C++G + +A
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P F +IR L A + ++M + G KP+ + I++ G G K
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
EL + M G++P+ YN ++ C++ + D++ ++V+ M + G P++VT N+ + A
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 125 LCEAGDLSKAKGVMKEMGLKGV----ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LC+ G + A + +M L N TY +ML G + +A L E + +
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ + + + G EA ++K++ K P ++ L+
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + I K+ + A +L M++ G + Y ++ G+ + ++ L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM G+ P++ TYN I LC+ KV++A ++D M++ PNV + L+ A C+
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 128 AGDLSKAKGVMKE-MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
D A+ V + + + G + L Y +M + L+ ++ +A+ LLE +L + F +
Sbjct: 677 VPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAK--SFAPGA 220
+ +++ +C+K + A ++ K++ + F P A
Sbjct: 735 LYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAA 770
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + ++ +KE R ++ M GI P + +++ + EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FDEM G P+ +T+ + + G CK D+ ++++++M G PN V NT++ + C
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF----YP 183
G ++ ++++M +G+ ++ T+ + L + ++ +AS + +M + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKI 211
S T++ ++ C+ GL+ +A L + I
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESI 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK-LDELFDEMLVLGLIPDVYTYNVYINGL 90
++++MK+ GI P++ Y + + EG+ V+ L DEM+ + P+V+++ I
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQ-YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
CK D A ++ ++ + + C + + L AG L KA +++ + +G EL
Sbjct: 675 CKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGT 733
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
Y+ +++ L K E+ AS +L +M+ + + + +I + + G EA K
Sbjct: 734 FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADK 793
Query: 211 I--------VAKSFAPGAR 221
+ VA P AR
Sbjct: 794 MMEMASVGEVANKVDPNAR 812
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 11 MDFTDMI-RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+D T I R LV+ + + + N + I+ + + + I A+ +++ D+ F
Sbjct: 39 LDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHI--DKAFP 96
Query: 70 EM-LVLGLIPD----VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ LV P+ VY YN+ + K+ +V+ + M+ G P T N L+ A
Sbjct: 97 QFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRA 156
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC++ + A+ + EM KG + N T+ I++ G + LL M P
Sbjct: 157 LCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN 216
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
++ I+ C++G +++ ++++K+ + P
Sbjct: 217 KVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + I++L + E+ DA +L++M Q I P+V + ++ D
Sbjct: 620 MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPD 679
Query: 61 YVKLDELFDEMLVL-----GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
+ E+F+ + + GL Y++ N L ++ +A +++++++ G +
Sbjct: 680 FDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGT 733
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
L+ +LC+ +L A G++ +M +G + ++DGL EA+ ++
Sbjct: 734 FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADK 793
Query: 176 MLK 178
M++
Sbjct: 794 MME 796
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR++G P +T +I K DA + N+M Q G++ +VV YT ++ G+
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +ELF +M G+IP++ +YN I+G K +D A+++++ + G KP+++ T
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ LC + AK VM EM G++ N Y ++D E LL+EM +
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TF +I +C+ L+++A++ +I
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + + MI K R D + +MK +PDV+ Y +++ G
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E + EM GL P+V +Y+ ++ CK+ + +AI+ M ++G PN T +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A C+ G+LS A + EM GVE N+ TY ++DGL + EA L +M
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P ++++ +I + ++ ALEL+ ++ + P
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ P ++ K + D M G +P V Y I++ + EGD
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF+EM GL+PD TYN I+G K ++D+ + + M + C+P+V+T N
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G L +EM G++ N+ +Y ++D + + +A +M +
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
P T+ ++I C+ G +++A L
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRL 424
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K + L +MK +G+KP+VV Y+ ++ EG + +
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +M +GL+P+ YTY I+ CK + +A ++ + M+++G + NVVT L+ LC+
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
A + +A+ + +M GV NL +Y ++ G V + A LL E+ + P
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
+ I +C I A +M ++
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEM 533
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 6/223 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE- 66
P V + MI + KE A + +MK G+ PD V Y ++ G G +LD+
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF---GKVGRLDDT 316
Query: 67 --LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F+EM + PDV TYN IN CK K+ ++ M G KPNVV+ +TL+ A
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + +A +M G+ N +TY ++D + +A L EML+
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I +C + EA EL K+ P ++ AL+
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ F +M + P + N ++ K K D+ + MI G +P V T N ++ +
Sbjct: 213 QCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCM 272
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ GD+ A+G+ +EM +G+ + TY M+DG + + EEM C P
Sbjct: 273 CKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDV 332
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C C+ G + LE +++ P ++ L+
Sbjct: 333 ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P V+ ++ ++ KE A+ M++ G+ P+ YT ++ G+
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +EML +G+ +V TY I+GLC ++ EA ++ M G PN+ + N
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +A ++ +A ++ E+ +G++ +L Y + GL +I A +++ EM +
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
S + ++ + G E L L+ ++
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G + +T ++ K + L++L++MK+ I+ VV + +++ G+
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 61 YVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
K + F+ + GL + + I+GLCK N+V+ A + + M++ G P+
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L+ + G++ +A + +M G++L+L Y ++ GL ++ +A LEEM+ +
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 180 CFYPRSSTFDNIICCMCQK-----GLINEALEL 207
+P D ++C K G I+EA+EL
Sbjct: 713 GIHP-----DEVLCISVLKKHYELGCIDEAVEL 740
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 4/222 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
PG F + L+ +A+ ++MK+ + P +L G +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M+ G P V+TYN+ I+ +CK+ V+ A + + M G P+ VT N+++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLKKCFYPRS 185
G L +EM E ++ TY +++ GK IG EM P
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE--FYREMKGNGLKPNV 367
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ ++ C++G++ +A++ + P + +L+
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 15/222 (6%)
Query: 21 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
+KE+ + + M ++G K V Y IV + Y + + EM++ DV
Sbjct: 118 LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDV 177
Query: 81 Y-----TYNVYING----------LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ T NV + G L ++EAIQ M + P +CN LL
Sbjct: 178 FDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRF 237
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+ G K K+M G + TY IM+D + + ++ A L EEM + P +
Sbjct: 238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++++I + G +++ + +++ P + AL+
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G + +T ++ VK + DA + ++M++ GI+ DV YT ++S +G+
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 61 YVKLDELFDEMLVLGLIPDVYTY-----------------------------------NV 85
+ LFDE+ GL P YTY N
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+G C++ VDEA I D M + G + +V TCNT+ +AK + M G
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V+L+ +Y ++D + + EA L EM K P + T++ +I C++G I EA
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+L + A P + + +L+
Sbjct: 525 KLRANMEANGMDPDSYTYTSLI 546
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +I VK+ +L MK+DG+ + V YT+++ V G
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++LFDEM G+ DV+ Y I+ C++ + A + D + + G P+ T L+
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+C+ G++ A+ +M EM KGV + + ++DG K + EAS++ + M +K F
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 185 SSTFDNIICCMCQKGLINEALELM 208
T + I C + +EA + +
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWL 457
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Query: 17 IRFLV--KEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
I FLV K+ R +D L I +M G+K V TIV+ G+ G+ K +L E V
Sbjct: 193 IVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSV 252
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
G+ P+ YTYN IN KQ ++ M K G N VT L+ + G +S
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A+ + EM +G+E ++H Y ++ K + A LL +E+ +K P S T+ +I
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 194 CMCQKGLINEALELMKKIVAK 214
+C+ G + A LM ++ +K
Sbjct: 373 GVCKVGEMGAAEILMNEMQSK 393
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF V + + +R +A L +M + G+K V YT ++ EG+
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF EM G+ P+ TYNV I CKQ K+ EA ++ +M G P+ T +
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C A ++ +A + EMGLKG++ N TY +M+ GL + EA L +EM +K
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 181 FYPRSSTFDNIICCM 195
+ + + +I M
Sbjct: 605 YTIDNKVYTALIGSM 619
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 8/214 (3%)
Query: 19 FLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD---ELFDEMLV 73
F V + GM + L + + M + G+ D + L VA ++D E+F M+
Sbjct: 161 FRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFL---VAAKKRRRIDLCLEIFRRMVD 217
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
G+ VY+ + + GLC++ +V+++ +++ G KP T NT++ A + D S
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
+GV+K M GV N TY ++++ V ++ +A L +EM ++ + ++I
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+KG + A L ++ K +P + + AL+
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 4/211 (1%)
Query: 24 ERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
+GM +A I + M+Q G + DV + S Y + + M+ G+
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
+Y I+ CK+ V+EA ++ M G +PN +T N ++ A C+ G + +A+ + M
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G++ + +TY ++ G + EA L EM K S T+ +I + + G
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 202 NEALELMKKIVAKSFAPGARAWEALL--LHS 230
+EA L ++ K + + + AL+ +HS
Sbjct: 591 DEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ GF P V+ + +I K + AL + MK++G+K ++ Y+++++G V D
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F++M+ G+ PDV YN I+ C +D AIQ V M KL +P T
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ ++GD+ ++ V M G +HT+ +++GLV K ++ +A +L+EM
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ I+ G +A E ++ + +EALL
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 70/297 (23%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS------- 53
M++ G + ++ MI VK + +A + M ++G+KPDV+ Y ++S
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 54 ----------------------------GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
G GD + E+FD M G +P V+T+N
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPN------------------------------- 114
INGL ++ ++++A++I+D M G N
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 115 ----VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
+ T LL A C++G + A V KEM + + N Y I++DG + ++ EA+
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
L+++M K+ P T+ + I + G +N A + ++++ A P + + L+
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V F +I LV++ + A+ IL++M G+ + YT ++ G + GD
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E F + GL D++TY + CK ++ A+ + M N N
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ GD+ +A ++++M +GV+ ++HTY + ++ A+ +EEM
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +I + L +AL +++ A P + LL
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ + +++ K R AL + +M I + Y I++ G GD + +L
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M G+ PD++TY +I+ K ++ A Q ++ M LG KPN+ T TL+ A
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL------LLEEMLKKCFYP 183
KA +EM G++ + Y +L L+ +A I EA + + +EM++
Sbjct: 814 LPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIV 873
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
T + C+C+ I + + + + K+F P W + H G
Sbjct: 874 DMGTAVHWSKCLCK---IEASGGELTETLQKTFPPD---WSSHHHHHG 915
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 35/258 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P +T +I +AL + +MK++GI+ +V Y++++ G G
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCK---------------QNKVDEAIQIVDS 105
D FDE + + Y I C+ + +D I I +
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHT 454
Query: 106 MI--------------------KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
M+ + G P VVT L+ + G +SKA V + M +G
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V+ NL TY +M++G V + A + E+M+K+ P ++NII C G ++ A+
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 206 ELMKKIVAKSFAPGARAW 223
+ +K++ P R +
Sbjct: 575 QTVKEMQKLRHRPTTRTF 592
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 30 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
L + ++K+ G P VV Y +++ G K E+ M G+ ++ TY++ ING
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMING 528
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
K A + + M+K G KP+V+ N ++ A C G++ +A +KEM
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNIICCMCQKGLINEALELM 208
T+ ++ G ++ SL + +M+++C P TF+ +I + +K + +A+E++
Sbjct: 589 TRTFMPIIHGYAKSGDM-RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 209 KKIV 212
++
Sbjct: 648 DEMT 651
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +F M++F + A +M+ GI P YT ++ D +
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G+ + TY+V + G K + A D ++ N ++ A C+
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FYPRSS 186
++ +A+ +++EM +G++ + Y M+DG A+ + L++ + LK+C F P
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD-EKKGLVVFKRLKECGFTPTVV 485
Query: 187 TFDNIICCMCQKGLINEALELMK 209
T+ +I + G I++ALE+ +
Sbjct: 486 TYGCLINLYTKVGKISKALEVSR 508
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.4 bits (233), Expect = 6e-20, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Query: 27 MD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
MD A IL QM I P+VV Y+ V+ G G + + LF EM LG+ D +YN
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
++ K + +EA+ I+ M +G K +VVT N LLG + G + K V EM +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V NL TY ++DG EA + E + +I +C+ GL+ A+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L+ ++ + +P + +++
Sbjct: 570 SLIDEMTKEGISPNVVTYNSII 591
Score = 86.3 bits (212), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 91/185 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I K R +AL + +M+ GI D V Y +LS G + ++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM +G+ DV TYN + G KQ K DE ++ M + PN++T +TL+ +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A + +E G+ ++ Y ++D L +G A L++EM K+ P T
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 188 FDNII 192
+++II
Sbjct: 587 YNSII 591
Score = 86.3 bits (212), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 83/160 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR LG + + ++ K R +AL IL +M GIK DVV Y +L G +G
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y ++ ++F EM ++P++ TY+ I+G K EA++I G + +VV +
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
L+ ALC+ G + A ++ EM +G+ N+ TY ++D
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 104/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + F ++ + A + ++M I+ DV Y +L I G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+ +M V ++P+V +Y+ I+G K + DEA+ + M LG + V+ NT
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL + G +A +++EM G++ ++ TY +L G + + E + EM ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +I + GL EA+E+ ++ + + AL+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 113/236 (47%), Gaps = 3/236 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG-DYVK 63
G+ V F+ +I + +A+ + N MK+ G++P++V Y V+ G ++ +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-IVDSMIKLGCKPNVVTCNTLL 122
+ + FDEM G+ PD T+N + +C + + EA + + D M + +V + NTLL
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A+C+ G + A ++ +M +K + N+ +Y ++DG EA L EM
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
+++ ++ + G EAL++++++ + + ALL G Y E
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+F+ G VY ++ I+ + +EAI + +SM + G +PN+VT N ++ A
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 127 EAG-DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEMLKKCFYPR 184
+ G + + EM GV+ + T+ +L + + + EA+ L +EM +
Sbjct: 315 KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQD 373
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ ++ +C+ G ++ A E++ ++ K P ++ ++
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 4/197 (2%)
Query: 25 RGMD-ALYILNQMKQ--DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
R MD AL + MK+ DG KP+V Y V++G V GD K + M PDV
Sbjct: 171 RKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVC 229
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+N+ ING C+ +K D A+ + M + GC+PNVV+ NTL+ +G + + + EM
Sbjct: 230 TFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEM 289
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G + T I++DGL + + +A L+ ++L K P + +++ +C +
Sbjct: 290 IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKA 349
Query: 202 NEALELMKKIVAKSFAP 218
A+E+M+++ K P
Sbjct: 350 VRAMEMMEELWKKGQTP 366
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + ++ VK AL +M ++ KPDV + I+++G + +L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM G P+V ++N I G K++E +++ MI+LGC+ + TC L+ LC
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + A G++ ++ K V + Y +++ L G+ + A ++EE+ KK P
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ + + G +A M+K++ P + + LL
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLL 410
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 104/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P V+ F +IR + + + + + +M + G + I++ G+ EG
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L ++L ++P + Y + LC +NK A+++++ + K G P + C T
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L ++G KA G M++M G+ + T+ ++L L +A+ L K
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P +T+ ++ ++G E L+ +++ K P + L+
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 74/153 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P D+ ++ L E + + A+ ++ ++ + G P + T ++ G+ G K
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++M+ G++PD T+N+ + LC + +A ++ G +P+ T + L+ +
Sbjct: 391 MEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
G + + ++ EM K + ++ TY ++DGL
Sbjct: 451 EGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
+ I+ C+ K+D A+ D+M +L KPNV NT++ ++GD+ KA + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G + + ++ T+ I+++G ++ A L EM +K P +F+ +I G I
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 202 NEALELMKKIV 212
E +++ +++
Sbjct: 280 EEGVKMAYEMI 290
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F ++R L + DA + G +PD Y +++SG EG
Sbjct: 394 MMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGR 453
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
+ + L +EML ++PD++TYN ++GL
Sbjct: 454 RKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P + T ++ L K R A + +M GI PD V + ++L + +
Sbjct: 361 KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHST 420
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ L G PD TY+V ++G K+ + E +V+ M+ P++ T N L+
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Query: 123 GALCEAGDLSKAKGVM 138
L G S+ + M
Sbjct: 481 DGLSCTGKFSRKQVRM 496
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ +I K R A+ + ++MK + ++P YT +L G K +L
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM G P VYTY I GL K +VDEA M++ G P+VV N L+ L +
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-GKAEIGEASLLLEEMLKKCFYPRSS 186
G + + V EMG+ + +Y ++ L KA + E S ++M P
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I C+ + +AL L++++ K F P A+ +L+
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
MI+ K + +A+ + N+MK G PDV Y ++SG+V G + + L +M G
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
D+ ++N+ +NG + AI++ +++ G KP+ VT NTLLG AG +A
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGL 160
+M+EM KG E + TY +LD +
Sbjct: 605 RMMREMKDKGFEYDAITYSSILDAV 629
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ +++ L K R + + ++M P VV Y V+ +
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 61 YV-KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+V ++ FD+M + P +TY++ I+G CK N+V++A+ +++ M + G P
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L+ AL +A A + KE+ ++ Y +M+ ++ EA L EM +
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P ++ ++ M + G+INEA L++K+
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ P ++ +I K R AL +L +M + G P Y +++ +
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y +ELF E+ Y V I K K+ EA+ + + M G P+V N
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + +AG +++A ++++M G +++++ I+L+G A + E +
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ C G+ EA +M+++ K F A + ++L
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+ P V+ +++++ L + + AL + Q K KP Y V+ ++ EG + K
Sbjct: 158 VSVSPAVL--SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEK 215
Query: 64 LDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ E++ EM G PD TY+ I+ K + D AI++ D M +P TLL
Sbjct: 216 VHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLL 275
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
G + G + KA + +EM G ++TY ++ GL + EA ++ML+
Sbjct: 276 GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Query: 183 PRSSTFDNIICCMCQKGLINE 203
P +N++ + + G + E
Sbjct: 336 PDVVFLNNLMNILGKVGRVEE 356
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 4/211 (1%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P F +IR + + +++ + + GIKP + + +L +V E +
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIA 165
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ +M+ G+ DVYTY + + GL N++ + +++ M G PN V NTLL
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +A+ +M EM E N T+ I++ + ++ ++ +LLE+ F P
Sbjct: 226 ALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAK 214
T ++ +C +G ++EALE+++++ +K
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 4/221 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + + ++ L K + A ++++MK+ P+ V + I++S E
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQK 263
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ L ++ LG +PDV T + LC + +V EA+++++ + G K +VV CNT
Sbjct: 264 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 323
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G + A+ EM KG N+ TY +++ G + A +M
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+TF+ +I + G ++ L++++ + GAR
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGAR 424
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE---G 59
K G P + F ++ LVKE+ + + +M GI DV Y I++ G+ G
Sbjct: 140 KFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIG 199
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM------------- 106
D KL ++ M G+ P+ YN ++ LCK KV A ++ M
Sbjct: 200 DGFKLLQI---MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILIS 256
Query: 107 ------------------IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LG P+VVT ++ LC G +S+A V++ + KG ++
Sbjct: 257 AYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV 316
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
++ ++ G ++ A EM +K + P T++ +I C G+++ AL+
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 36/181 (19%)
Query: 23 EERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
E+ GMD L +QM +G P ++ ++ G + EL ++M+ G +P
Sbjct: 470 EKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSS 529
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+N I G CKQ+KV I+ V+ M + GC P+ + N LL LC GD+ K
Sbjct: 530 TFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK-------- 581
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
A LL M++K P S + +++ C+ QK I
Sbjct: 582 ---------------------------AWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAI 614
Query: 202 N 202
+
Sbjct: 615 H 615
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 43/267 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG- 59
M + G+ P V + +I AL N MK D I+ + + ++ G+ G
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 60 --DYVKLDELF-DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
D +K+ E+ D V G D YN I G K+N+ ++A++ + M KL P V
Sbjct: 404 TDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEKLF--PRAV 459
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ L +LCE G + K +M +G ++ ++ +I E+ L+ +M
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 177 LKKCFYPRSSTFDNIICCMCQ-----------------------------------KGLI 201
+ + + PRSSTF+ +I C+ KG I
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 202 NEALELMKKIVAKSFAPGARAWEALLL 228
+A L ++V KS P W +L+
Sbjct: 580 QKAWLLFSRMVEKSIVPDPSMWSSLMF 606
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G CP V +T MIR K+ A+ + M G++PD YT +++G G
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GT 415
Query: 61 YVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
KLD EL EM G PD TYN I + Q + A +I + MI+ +P++ T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N ++ + A + + V +EM KG+ + ++Y +++ GL+G+ + EA LEEML
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Query: 178 KK 179
K
Sbjct: 536 DK 537
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K F P +M +T ++ + ++A I N M G+KPD+V + ++L G++
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+LF M G P+V +Y + I CKQ+ ++ AI+ D M+ G +P+ L+
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
L ++KEM KG + TY ++ + + A+ + +M++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ I + +A+++ G WE ++
Sbjct: 471 PSIHTFNMI---------------MKSYFMARNYEMGRAVWEEMI 500
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ M+ L++ + DA+ + + MK G P+V YTI++ +
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E FD+M+ GL PD Y I G Q K+D +++ M + G P+ T N L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGKAEIGEASLLLEEMLKKCFY 182
+ A + +M +E ++HT+ +++ + E+G A + EEM+KK
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA--VWEEMIKKGIC 505
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P +++ +I + +G EA +++++ K
Sbjct: 506 PDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 108/227 (47%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K F GV ++ L + + G +A + +++K+ P+++ YT++L+G +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRN 313
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ ++++M+ GL PD+ +NV + GL + K +AI++ M G PNV +
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ + A +M G++ + Y ++ G + ++ LL+EM +K
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I M + + A + K++ P + ++
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 480
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ GF + M+ L K + + +L +M G+ + +TI + A +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 246
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K +F+ M V T N ++ L + K+ + Q++ +K PN++T LL
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C +L +A + +M +G++ ++ + +ML+GL+ + +A L M K
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P ++ +I C++ + A+E +V P A + L+ G+
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + +I+ + ++ A I N+M Q+ I+P + + +++ +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y +++EM+ G+ PD +Y V I GL + K EA + ++ M+ G K ++ N
Sbjct: 489 YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 121 LLGALCEAG 129
G
Sbjct: 549 FAADFHRGG 557
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ + +I LV DA+ + ++ G+ PD Y +++SG+ G
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ LF EML ++PD Y Y I+G + DEA ++ ++ G K +VV N
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C +G L +A M M + + + TY ++DG V + ++ A + M K
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++I C +G A E K++ + P + L+
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 85/308 (27%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY--- 61
G P + ++ L K R + A + ++M I PD Y ++ G + GD+
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 62 -----------VKLDELFDEMLVLG---------------------LIPDVYTYNVYING 89
VK+D + ++ G L+PD +TY+ I+G
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
KQ + AI+I M K CKPNVVT +L+ C GD A+ KEM L+ + N
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEE--MLKKC--------------------------- 180
+ TY ++ L ++ E ++ E M KC
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPD 684
Query: 181 ------------FYPR---------SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
F+ R ++ +++ + C+C G++ A K+V K F+P
Sbjct: 685 GSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Query: 220 ARAWEALL 227
++ A+L
Sbjct: 745 PVSFAAIL 752
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 110/223 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + F MI KE + + +L+++K+ G++ V ++ G V
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E ++ PDV TYN+ IN LCK+ K + A+ +D K G PN ++ L+ A
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C++ + A ++ +M +G + ++ TY I++ GLV + +A + +++ + P
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ ++ ++ +C+ G A L +++ ++ P A + L+
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + +I L KE + A+ L++ + G+ P+ + Y ++ +Y +L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G PD+ TY + I+GL +D+A+ + +I G P+ N L+ LC+
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G AK + EM + + + + Y ++DG + + EA + ++K
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C+ G+++EAL M ++ + P + ++
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
PDV+ +LS +V +++DEM G D Y+ + + G+C + KV+ ++
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++ GC PN+V NT++G C+ GD+ A V KE+ LKG L T+ M++G
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
+ + + LL E+ ++ +NII + G + E + I+A P
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 223 WEALL 227
+ L+
Sbjct: 348 YNILI 352
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
KPDV Y I+++ + EG DE GLIP+ +Y I CK + D A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
++ M + GCKP++VT L+ L +G + A + ++ +GV + Y +++ GL
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
A LL EML + P + + +I + G +EA ++ V K
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + ++K G P + + +++G EGD+V D L E+ GL V+ N I
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 88 NGLCKQN-KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+ + KVD A + + +I CKP+V T N L+ LC+ G A G + E KG+
Sbjct: 318 DAKYRHGYKVDPA-ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGL 376
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
N +Y ++ E AS LL +M ++ P T+ +I + G +++A+
Sbjct: 377 IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVN 436
Query: 207 LMKKIVAKSFAPGARAWEALL 227
+ K++ + +P A + L+
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLM 457
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 95/220 (43%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ LVK R DA + ++M G D I++ G+ EG +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ G IP++ YN I G CK ++ A + + G P + T T++ C+
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD + ++ E+ +G+ +++ ++D + + + ++ P +T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C++G A+ + + K P ++ L+
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 8 PGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAE-------- 58
P V+ +T +IR L KE ++ A+Y M + P+ V + +L G V +
Sbjct: 623 PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE 682
Query: 59 ------GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 112
G E F M G YN + LC V A D M+K G
Sbjct: 683 PDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFS 742
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGV-MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 171
P+ V+ +L C G+ + + + +G KG+E+ + Y +L+ + + I EAS
Sbjct: 743 PDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR-YSQVLEQHLPQPVICEAST 801
Query: 172 LLEEMLKK 179
+L M++K
Sbjct: 802 ILHAMVEK 809
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDAL-YILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ F + + + A I+ +M + +KP+V +++G EG
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEG 545
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ F M LG+ P+++ +N I G N +D ++VD M + G KP+VVT +
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ A GD+ + + + +M G++ ++H + I+ G E +A +L +M K
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVA-KSFAPGARAWEALLLHSG 231
P + II C G + +A+++ KK+ +P +E L+ G
Sbjct: 666 GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFG 718
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 112/228 (49%), Gaps = 8/228 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +T ++ L +++ L ++++++++G+KPD + + +++ G+ +
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 408
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLG 123
++F++M G P T+N I G K K++E+ +++D M++ +PN TCN L+
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA----SLLLEEMLKK 179
A C + +A ++ +M GV+ ++ T+ + A IG +++ ML
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAY---ARIGSTCTAEDMIIPRMLHN 525
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T I+ C++G + EAL ++ P + +L+
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C V T ++ L++ R +A I N + ++G KP ++ YT +++ + + + L
Sbjct: 316 CGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLS 375
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L ++ GL PD +N IN + +D+A++I + M + GCKP T NTL+
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 127 EAGDLSKAKGVMKEMGLKG--VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G L ++ ++ +M L+ ++ N T I++ + +I EA ++ +M P
Sbjct: 436 KIGKLEESSRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 185 SSTFDNI 191
TF+ +
Sbjct: 495 VVTFNTL 501
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 29/245 (11%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K G P + F +I + A+ I +MK+ G KP + ++ G G
Sbjct: 380 VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 61 YVKLDELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ L D ML ++ P+ T N+ + C Q K++EA IV M G KP+VVT N
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 120 TL------LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
TL +G+ C A D+ ++ M V+ N+ T +++G + ++ EA
Sbjct: 500 TLAKAYARIGSTCTAEDM-----IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLIN--------EALELMKKIVAK----SFAPGAR 221
M + +P F+++I KG +N E ++LM++ K +F+
Sbjct: 555 YRMKELGVHPNLFVFNSLI-----KGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Query: 222 AWEAL 226
AW ++
Sbjct: 610 AWSSV 614
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 42/212 (19%)
Query: 1 MRKLGFCPGVMDFTDMIR-FLVKEERGMDAL-YILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M++LG P + F +I+ FL + MD + +++ M++ G+KPDVV ++ +++ +
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNIND--MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV-- 116
GD + +E++ +ML G+ PD++ +++ G + + ++A QI++ M K G +PNVV
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 117 ----------------------------------TCNTLLGALCEAGDLSKAKGVMKEMG 142
T TL+ EA KA+ ++K+M
Sbjct: 675 TQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Query: 143 LKGVELNLHTYRIMLDGL--VGKAEIGEASLL 172
K V T +++ DG +G + +A+ L
Sbjct: 735 GKNVVPTRKTMQLIADGWKSIGVSNSNDANTL 766
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI-VAEGDYVKLDE 66
P F MI L K ++ + ++ +M G PDV Y V+ G+ +AE K+DE
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAE----KVDE 394
Query: 67 LF---DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ DEM G PD+ TYN ++ LC+ K DEA+++ M++ C P+V T N L+
Sbjct: 395 AYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
E D A EM + ++ TY M++GL EA LLEE++ K
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
Query: 184 RSSTFDNIICCMCQKG---LINEALELMKKIVAKSFA 217
FD+ + + + G I++ E MKK S A
Sbjct: 515 PYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMA 551
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L +M+ +KPD + ++ G D K +L +EM+ G P+ +TY I+ C
Sbjct: 256 LLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFC 314
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNT---LLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+ VDEA + D MI G + T T ++ AL + + ++ M G
Sbjct: 315 QAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLP 374
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY+ +++G+ ++ EA L+EM K + P T++ + +C+ +EAL+L
Sbjct: 375 DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 209 KKIVAKSFAPGARAWEALL 227
++V AP + + L+
Sbjct: 435 GRMVESRCAPSVQTYNMLI 453
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG---LIPDVYTYNV 85
A+ +L +M + G KP+ Y + G + +LFD M+ G P T+ +
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I L K +K +E +++ MI GC P+V T ++ +C A + +A + EM KG
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
++ TY L L + EA L M++ P T++ +I
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
P++ +N+ ++ LCK V E ++ M + KP+ T N L C D KA +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK---CFYPRSSTFDNIICC 194
++EM G + TY +D + EA+ L + M+ K P + TF +I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + E EL+ ++++ P ++ ++
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR GF P + T +++ L + R +DA L+ + +G +V T + G++
Sbjct: 535 MRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG 594
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ELF ++ G PDV Y+V I LCK + EA + + M+ G KP V T N+
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ G++ + + M ++ TY ++ GL EA EM K
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
YP TF +I +C+ G EAL +++ K P + +
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF ++ T I L+K E L + + +G PDV+ Y +++ + ++
Sbjct: 574 GFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA 633
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D LF+EM+ GL P V TYN I+G CK+ ++D + + M + P+V+T +L+
Sbjct: 634 DILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHG 693
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC +G S+A EM K N T+ ++ GL GEA + EM +K P
Sbjct: 694 LCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPD 753
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
S+ + +++ IN + +++V K P
Sbjct: 754 SAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G CP V+ + +I+ L K R M+A + N+M G+KP V Y ++ G EG+ +
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
M PDV TY I+GLC + EAI + M C PN +T L+
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G +A +EM K +E + Y ++ + I + EM+ K +P
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPV 788
Query: 185 S 185
S
Sbjct: 789 S 789
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 99/223 (44%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G PG M + ++I + KE R ++L +L +MK G++P + + D+V
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L +M G P + + LC+ + +A + +D + G ++V +
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + + + + +++ G ++ Y +++ L EA +L EM+ K P
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+T++++I C++G I+ L + ++ P + +L+
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++ +++ I+ + Y +++ G V E K +LF++M +G+ D+ Y+V I
Sbjct: 267 AFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIG 326
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK-AKGVMKEMGLKGVE 147
GLCK ++ A+ + + + G P+ LL + E +LS+ + ++ ++ K V
Sbjct: 327 GLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVM 386
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEML------------------KKCFYPRSSTFD 189
L Y+ + +G + + EA ++ ++ K P S +
Sbjct: 387 L---LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLS 443
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPG 219
+I C+ + ++ A+ L+ IV PG
Sbjct: 444 IVINCLVKANKVDMAVTLLHDIVQNGLIPG 473
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%)
Query: 23 EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYT 82
E G+ + L + I PD +IV++ +V L +++ GLIP
Sbjct: 417 ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMM 476
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
YN I G+CK+ + +E+++++ M G +P+ T N + G L E D A ++K+M
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
G E + ++ L +A L+++ + F I + + ++
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
LEL + I A P A+ L+
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLI 621
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIV-AEGDYVKLD 65
PG F IR L +A + +++++ G+ P+ Y +L I + V+L
Sbjct: 141 PGAFGF--FIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELV 198
Query: 66 EL-FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E EM G D +T + C K + A+ + + ++ G ++ L+ +
Sbjct: 199 EARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVS 257
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + KA +++ + + + LN TY +++ G V ++ I +A L E+M +
Sbjct: 258 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 317
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ +D +I +C+ + AL L +I P
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P V + L+ + R AL +M++ I P+ +V+SG G
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K EL +M LG +YN I G C++ + A+++ + M K G +PNVVT NT
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C A L +A V EM V N TY +++G + + A E+M+
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
T++ +I +C++ +A + +K++ ++ P + + AL++
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L M++ G + V Y +++G +G +L + M GL P+V T+N I+G C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ K+ EA ++ M + PN VT NTL+ + GD A ++M G++ ++
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY ++ GL +A+ +A+ ++E+ K+ P SSTF +I C + + EL K +
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 212 VAKSFAPGARAWEALL 227
+ P + + L+
Sbjct: 440 IRSGCHPNEQTFNMLV 455
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ F +I + + +A + +MK + P+ V Y +++G +GD
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV----------------- 103
+ +++M+ G+ D+ TYN I GLCKQ K +A Q V
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 104 ------------------DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
SMI+ GC PN T N L+ A C D A V++EM +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ L+ T + +GL + + LL+EM K F S F+N
Sbjct: 479 IPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES--FNN 521
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 3/236 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LGF + + +I ++ AL + N M + G++P+VV + ++ G
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F EM + + P+ TYN ING +Q + A + + M+ G + +++T N
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ KA +KE+ + + N T+ ++ G + L + M++
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGSD 233
+P TF+ ++ C+ + A ++++++V +S +R + L H G D
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F + + ++ +A QMK G P V +S ++ +G + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ P+ YT N+ ++G C+ K+D+ I+++ M +LG + V+ NTL+ CE G LS
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A + MG G++ N+ T+ ++ G ++ EAS + EM P + T++ +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
Q+G A + +V + AL+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P V + L+ + R AL +M++ I P+ +V+SG G
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K EL +M LG +YN I G C++ + A+++ + M K G +PNVVT NT
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C A L +A V EM V N TY +++G + + A E+M+
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
T++ +I +C++ +A + +K++ ++ P + + AL++
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L M++ G + V Y +++G +G +L + M GL P+V T+N I+G C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ K+ EA ++ M + PN VT NTL+ + GD A ++M G++ ++
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY ++ GL +A+ +A+ ++E+ K+ P SSTF +I C + + EL K +
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 212 VAKSFAPGARAWEALL 227
+ P + + L+
Sbjct: 440 IRSGCHPNEQTFNMLV 455
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ F +I + + +A + +MK + P+ V Y +++G +GD
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV----------------- 103
+ +++M+ G+ D+ TYN I GLCKQ K +A Q V
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 104 ------------------DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
SMI+ GC PN T N L+ A C D A V++EM +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ L+ T + +GL + + LL+EM K F S F+N
Sbjct: 479 IPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES--FNN 521
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 3/236 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LGF + + +I ++ AL + N M + G++P+VV + ++ G
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F EM + + P+ TYN ING +Q + A + + M+ G + +++T N
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ KA +KE+ + + N T+ ++ G + L + M++
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGSD 233
+P TF+ ++ C+ + A ++++++V +S +R + L H G D
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F + + ++ +A QMK G P V +S ++ +G + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ P+ YT N+ ++G C+ K+D+ I+++ M +LG + V+ NTL+ CE G LS
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A + MG G++ N+ T+ ++ G ++ EAS + EM P + T++ +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
Q+G A + +V + AL+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG P ++ + MI+ L ++ D L I +++++G +PD++ + +L +V
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ D ++D M L P++ +YN + GL + K +A+ ++D M G P+V T N L+
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A +L + EM KG+ + TY +++ L K ++ A + EE +K
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 183 PRSSTFDNIICCMCQKGLINEALELMK 209
R + + ++ + G I+EA +L+K
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K GF P ++ F ++ + E ++ I + MK + P++ Y + G+
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M G+ PDV+TYN I N ++E ++ + M + G P+ VT
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
L+ LC+ GDL +A V +E + + Y+ +++ L+G +I EA+ L++
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 35 QMKQDGIKP-DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 93
Q K D IK D V ++L G ++ +LFDEM L V ++N ++
Sbjct: 113 QKKFDDIKSEDFVIRIMLLYGYSGMAEHAH--KLFDEMPELNCERTVKSFNALLSAYVNS 170
Query: 94 NKVDEAIQIVDSMI-KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
K+DEA++ + KLG P++VT NT++ ALC G + + +E+ G E +L +
Sbjct: 171 KKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLIS 230
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ +L+ + E + + M K P ++++ + + + +AL L+ +
Sbjct: 231 FNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMK 290
Query: 213 AKSFAPGARAWEALL 227
+ +P + AL+
Sbjct: 291 TEGISPDVHTYNALI 305
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ FT +I K R AL + ++MK +K D+ Y ++ G + D
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF E+ LGL+P+V YN I+G K+D AI + M+ G ++ T T
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ L + G+++ A + E+ G+ + + ++++GL K + +AS +LEEM KK
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + +I ++G +NEA L +++ K
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ +M ++G P+VV +T +++G E+ EM + L D+ Y I+
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G CK+N + A + + +LG PNV N+L+ G + A + K+M G+
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+L TY M+DGL+ I AS L E+L P ++ + +KG +A +++
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 209 KKIVAKSFAPGARAWEALL 227
+++ K P + ++
Sbjct: 789 EEMKKKDVTPNVLLYSTVI 807
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD-VVCYTIVLSGIVAEG 59
M + G P + F+ M+ + K A+ +MK I P V+ +T++ + AE
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
L E+F++ I + N CKQ KVD A + M + G +PNVV N
Sbjct: 431 PEAAL-EIFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ A C ++ A+ + EM KG+E N TY I++DG + A ++ +M
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
F ++ II +C+ G ++A E+++ ++
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 3 KLGFCPGVMDFTDMI---RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
+LG P V + +I R L K + +D + +M DGI D+ YT ++ G++ +G
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAID---LYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +L+ E+L LG++PD + V +NGL K+ + +A ++++ M K PNV+ +
Sbjct: 745 NINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE--ASLLLEEM 176
T++ G+L++A + EM KG+ + + +++ G V K +SL EM
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPEM 863
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ + P + MI+ +K E AL I N + I +C I L +G
Sbjct: 406 MKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL-FCKQGK 464
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
M G+ P+V YN + C+ +D A I M++ G +PN T +
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + D A V+ +M E N Y +++GL + +A +L+ ++K+
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 181 FYPRS-STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
Y S +++++II + G + A+E +++ +P + +L+
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 104/248 (41%), Gaps = 35/248 (14%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-VL 74
++R ++E + +A+ I ++ G +PD + +++ + D V +L EM L
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G+ TY I K+ ++EA++++D M+ G +V+ +L+ C+ +L KA
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAE---------------IGEASLLLEEMLKK 179
+ M +G+ + + +M++ E I +S+L+ M++
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 180 CFYPRSS---------TFDN----------IICCMCQKGLINEALELMKKIVAKSFAPGA 220
C S +F++ I C++G ++ A +K + K P
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 221 RAWEALLL 228
+ ++L
Sbjct: 485 VFYNNMML 492
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG +T +I VKE +A+ ++++M GI V+ T +++G +
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG 362
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV------ 116
K +LF+ M GL PD ++V + CK ++++AI+ M + P+ V
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 117 ----------------------------TCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
CN + C+ G + A +K M KG+E
Sbjct: 423 QGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ Y M+ + A + EML+K P + T+ +I + A +++
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 209 KKIVAKSF 216
++ A +F
Sbjct: 543 NQMNASNF 550
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 102/218 (46%), Gaps = 1/218 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
++ GF F ++ ++ +R A+ M + P V VLS +V
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ E++++M+++G+ D T + + ++ K +EA++I ++ G +P+ + +
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 122 LGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ A C+ DL A +++EM G GV + TY ++ V + + EA +++EM+
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+++ C+ + +AL+L ++ + AP
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAP 378
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P ++ +I V R A +L +M+ ++P+ ++ +L+G G+
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K ++ EM +G+ PD YNV I+ K N +D A+ D M+ G +P+ VT NT
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G A+ + + M +G TY IM++ + + LL +M +
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T ++ + G N+A+E ++++ + P + + AL+
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 6/210 (2%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNVYIN 88
+L +MK G+KPD Y +V+ G + LD FD ML G+ PD T+N I+
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTF---GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
CK + A ++ ++M + GC P T N ++ + + K ++ +M +G+
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ T+ ++D +A LEEM P S+ ++ +I Q+GL +A+
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 209 KKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
+ + + P A +L+ G D +E
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 10/215 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + MI +ER D +L +MK GI P+VV +T ++ G
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E +EM +GL P YN IN ++ ++A+ M G KP+++ N+
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A E ++A V++ M GV+ ++ TY ++ L+ + + ++ EEM+
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
P + ++ AL MK+ + S
Sbjct: 685 CKPDRKA----------RSMLRSALRYMKQTLRAS 709
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 115/252 (45%), Gaps = 6/252 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN---QMKQDGIKPDVVCYTIVLSGIVA 57
MR+ G+ ++++ +I+ L + + +D++ +L ++++D ++ DV ++ G
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNK-IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAK 281
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
GD K +L GL T I+ L + EA + + + + G KP
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N LL + G L A+ ++ EM +GV + HTY +++D V A ++L+EM
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD--LT 235
P S F ++ +G + +++K++ + P + + ++ G L
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 236 YSETTFAGLFNQ 247
++ TTF + ++
Sbjct: 462 HAMTTFDRMLSE 473
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%)
Query: 15 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
D+I K AL +L + G+ ++S + G ++ + LF+E+
Sbjct: 274 DIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS 333
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G+ P YN + G K + +A +V M K G P+ T + L+ A AG A
Sbjct: 334 GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+ V+KEM V+ N + +L G + E + +L+EM P ++ +I
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ A+ +++++ P W L+
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG--DYVKLDELFDEMLVLGLIPDVYTYNVY 86
AL ++ +M+QDG + D V Y++V+ + D V L L+ E+ L DV N
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDI 275
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I G K +A+Q++ G T +++ AL ++G +A+ + +E+ G+
Sbjct: 276 IMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGI 335
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ Y +L G V + +A ++ EM K+ P T+ +I G A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 207 LMKKIVAKSFAPGARAWEALL 227
++K++ A P + + LL
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLL 416
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 84/193 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I K R + A + M++ G P Y I+++ + + +
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +M G++P+V T+ ++ K + ++AI+ ++ M +G KP+ N L+ A
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G +A + M G++ +L +++ EA +L+ M + P
Sbjct: 594 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 653
Query: 185 SSTFDNIICCMCQ 197
T+ ++ + +
Sbjct: 654 VVTYTTLMKALIR 666
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDE 66
P F M+ +E I +M+++ G P+V Y +++ A G + ++
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+++EM V G++ D+ YN I GLC +V +A ++ M G + +T L+ C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV----GKAEIGEASLLLEEMLKKCFY 182
+AGD+ V +EM KG E + T +++GL G+ + A ++ + + + FY
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + ++ ++ +C+ G ++ AL + ++V K F P + A +
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 43/215 (20%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++G P V + ++ +A + +MK G+ D+V Y ++ G+ + + V
Sbjct: 274 EVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVV 333
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K ELF +M + G+ TY +NG CK VD + + M + G + + +T L+
Sbjct: 334 KAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
Query: 123 GALC---------------------------------------EAGDLSKAKGVMKEMGL 143
LC E G + +A + EM
Sbjct: 394 EGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVG 453
Query: 144 KGVELNLHTYRIMLD--GLVGKAEIGEASLLLEEM 176
KG + + TYR +D G+VG E ++LL EM
Sbjct: 454 KGFKPSQETYRAFIDGYGIVGDEET--SALLAIEM 486
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 99/183 (54%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L M + G+ +VV YT ++ G +G + + +F+ + L+ D + Y V ++G C
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ ++ +A+++ D+MI++G + N CN+L+ C++G L +A+ + M ++ + H
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY ++DG + EA L ++M +K P T++ ++ + G ++ L L K +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 212 VAK 214
+ +
Sbjct: 463 LKR 465
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 99/197 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P VM + +++ + D L + M + G+ D + + +L + GD+ + +L
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++ +L GL+ D T NV I+GLCK KV+EA +I+D++ CKP V T L +
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+L +A V + M KG+ + Y ++ G + + + L+ E+ + P +T
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 188 FDNIICCMCQKGLINEA 204
+ +I C G+I++A
Sbjct: 614 YGALITGWCNIGMIDKA 630
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Query: 34 NQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG-LIPDVYTYNVYINGLCK 92
N + + P+ + Y + ++G+ G +LF ++L IPD YTY + I+G
Sbjct: 708 NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAI 767
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
+++A + D M G PN+VT N L+ LC+ G++ +A+ ++ ++ KG+ N T
Sbjct: 768 AGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAIT 827
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKK 179
Y ++DGLV + EA L E+M++K
Sbjct: 828 YNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + + M + G++ + +++G G V+ +++F M L PD +TYN +
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G C+ VDEA+++ D M + P V+T N LL G + K M +GV
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ + +L+ L + EA L E +L + + T + +I +C+ +NEA E+
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 208 MKKIVAKSFAPGARAWEAL 226
+ + P + ++AL
Sbjct: 529 LDNVNIFRCKPAVQTYQAL 547
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 65/111 (58%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+ D PD YTI++ G GD K L DEM + G+IP++ TYN I GLCK
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
VD A +++ + + G PN +T NTL+ L ++G++++A + ++M KG+
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKA 134
L+P+ YNV I GLCK K+++A ++ ++ P+ T L+ AGD++KA
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+ EM LKG+ N+ TY ++ GL + A LL ++ +K P + T++ +I
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 195 MCQKGLINEALELMKKIVAKSFAPGA 220
+ + G + EA+ L +K++ K G+
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLVRGS 860
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 7/215 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
++ F P V D V E+G+ +AL++ + M G P ++ +LS +V +
Sbjct: 148 FKEFSFSPTVFDMI----LKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRK 203
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV-DSMIKLGCKPNVVT 117
G+ ++D+M+ + PDV+T ++ +N C+ VD+A+ ++ LG + NVVT
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N+L+ GD+ V++ M +GV N+ TY ++ G K + EA + E +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+K + ++ C+ G I +A+ + ++
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI 358
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V+ +T +I+ K+ +A ++ +K+ + D Y +++ G G
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D M+ +G+ + N ING CK ++ EA QI M KP+ T NT
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C AG + +A + +M K V + TY I+L G + L + MLK+
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ ++ + + G NEA++L + ++A+
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 21 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM-LVLGLIPD 79
V++ AL++ +QM + PDV +IV++ G+ K E LGL +
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
V TYN ING V+ +++ M + G NVVT +L+ C+ G + +A+ V +
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
+ K + + H Y +++DG +I +A + + M++ ++ +++I C+ G
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 200 LINEALELMKKIVAKSFAPGARAWEALL 227
+ EA ++ ++ S P + L+
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 98/200 (49%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + +QM Q + P V+ Y I+L G G + + L+ ML G+ D + + +
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
L K +EA+++ ++++ G + +T N ++ LC+ +++AK ++ + + +
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ TY+ + G + EA + E M +K +P ++ +I + +N+ +L
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ ++ A+ P + AL+
Sbjct: 599 VIELRARGLTPTVATYGALI 618
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 2/202 (0%)
Query: 27 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
++A I ++M +KPD Y ++ G G + +L D+M ++P V TYN+
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+ G + + + + M+K G + ++C+TLL AL + GD ++A + + + +G+
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ T +M+ GL ++ EA +L+ + + +C P T+ + + G + EA
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC-KPAVQTYQALSHGYYKVGNLKEAF 561
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+ + + K P + L+
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLI 583
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+FD M G IP + + N ++ L ++ + A+ + D MI P+V TC+ ++ A
Sbjct: 176 HVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAY 235
Query: 126 CEAGDLSKAKGVMKEMGLK-GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C +G++ KA KE G+ELN+ TY +++G ++ + +L M ++
Sbjct: 236 CRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRN 295
Query: 185 SSTFDNIICCMCQKGLINEA---LELM--KKIVAKSFAPG 219
T+ ++I C+KGL+ EA EL+ KK+VA G
Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G + MI L K E+ +A IL+ + KP V Y + G G+ +
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + M G+ P + YN I+G K +++ +V + G P V T L+
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
C G + KA EM KG+ LN++ + + L +I EA LLL++++
Sbjct: 621 WCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL-NL 150
K K+ E+++ +S K PN + N + LC+AG L A+ + ++ + +
Sbjct: 698 KTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDE 755
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
+TY I++ G +I +A L +EM K P T++ +I +C+ G ++ A L+ K
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHK 815
Query: 211 IVAKSFAPGARAWEALL 227
+ K P A + L+
Sbjct: 816 LPQKGITPNAITYNTLI 832
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++M GI P++V Y ++ G+ G+ + L ++ G+ P+ TYN I+
Sbjct: 774 AFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID 833
Query: 89 GLCKQNKVDEAIQIVDSMIKLG 110
GL K V EA+++ + MI+ G
Sbjct: 834 GLVKSGNVAEAMRLKEKMIEKG 855
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 1/206 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ + + G+ D + +++SG+ + E+ D + + P V TY
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G K + EA + + M + G P + NTL+ + L+K ++ E+ +G+
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ TY ++ G I +A EM++K + I + + I+EA L
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 208 MKKIVAKS-FAPGARAWEALLLHSGS 232
++KIV PG ++ + L S +
Sbjct: 669 LQKIVDFDLLLPGYQSLKEFLEASAT 694
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 38/255 (14%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
GV +F ++R E +A I ++ PDV I+L G GD + +
Sbjct: 175 GVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI---------------------------- 100
EM+ G P+ TY + I+G CK+ EA+
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 101 -------QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
Q+ D + K G P+ N L+ +L + GD+S A VMKEM KG+E + T+
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 154 RIMLDGLVGKAEIGEASL--LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
M G++ E G + ++M ++ P++ T ++ C G +N L+L K +
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 212 VAKSFAPGARAWEAL 226
+ K + P A E L
Sbjct: 414 LEKGYCPHGHALELL 428
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 99/189 (52%)
Query: 30 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
L++ +MK++GI+P + Y +++G+V+ + +F+ M + PD+ TYN I G
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 266
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK + +A++ + M G + + +T T++ A D + +EM KG+++
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
H + +++ GL + ++ E + E M++K P + + +I + G + +A+ L+
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 210 KIVAKSFAP 218
+++ + F P
Sbjct: 387 RMIDEGFKP 395
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
ALY +M + GI+ +++V+ G+ EG + +F+ M+ G P+V Y V I+
Sbjct: 313 ALY--QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G K V++AI+++ MI G KP+VVT + ++ LC+ G + +A G+ +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N Y ++DGL + EA L EEM +K S ++ +I + ++EA+ L
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 209 KKI 211
K++
Sbjct: 491 KRM 493
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F+ +I L KE + + + M + G KP+V YT+++ G G L M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G PDV TY+V +NGLCK +V+EA+ + G N + ++L+ L +AG +
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS-STFDNI 191
+A+ + +EM KG + + Y ++D ++ EA L + M ++ ++ T+ +
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+ M ++ EAL+L ++ K P A + AL
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V +T +I K DA+ +L++M +G KPDVV Y++V++G+ G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + F GL + Y+ I+GL K +VDEA ++ + M + GC + N
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 121 LLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ A + + +A + K M +G + ++TY I+L G+ + EA L + M+ K
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
P ++ F + +C G + A +++ ++
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELA 565
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G+ P +YTYN +NGL VD A ++ + M KP++VT NT++ C+AG KA
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+++M +G E + TY M+ ++ G L +EM +K F +I
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C++G +NE + + ++ K P + L+
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + ++ LV A + M+ IKPD+V Y ++ G G
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E +M G D TY I + + + M + G + +
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++G LC+ G L++ V + M KG + N+ Y +++DG + +A LL M+ +
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 181 FYPRSSTFDNIICCMCQKGLINEALE 206
F P T+ ++ +C+ G + EAL+
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALD 418
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
+ +I K + +A+ + +M+++ G V YTI+LSG+ E + +L+D M
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
+ G+ P + GLC KV A +I+D + +G + C ++ LC+AG +
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA-CEDMINTLCKAGRI 588
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIG 167
+A + + +G E+ +M++ L VGKA++
Sbjct: 589 KEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GFC V+ ++ +I + A + +M+Q G+ +VV YT ++ + EG+
Sbjct: 317 MEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L D+M LGL PD Y ++ LCK VD+A + + MI+ P+ ++ N+
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNS 435
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC +G +++A + ++M K + T++ ++ GL+ ++ A + ++M+ K
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Query: 181 FYPRSSTFDNIICCMCQ 197
F D +I C
Sbjct: 496 FTLDRDVSDTLIKASCS 512
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LGF P + F + L +E + A+ M Q G +PDVV YTI+++G+ G
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCN 119
E+++ M+ G+ PD + GLC KVD A ++V IK K + V N
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ C+AG + KA+ + M G E +L TY ++L+ + A ++ EM++
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKK 210
+ +++ ++ C+ ++ M K
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK 315
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR + D+ I LV+E R A I MK G Y+ +SG+
Sbjct: 35 MRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKK 94
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +D L +M LG IPD++ +NVY++ LC++NKV A+Q M++ G +P+VV+
Sbjct: 95 FDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L AG ++ A + M GV + ++ GL ++ A ++ E +K
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 181 FYPRSS-TFDNIICCMCQKGLINEALELMKKIVAK 214
S+ ++ +I C+ G I +A E +K ++K
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKA-EALKSYMSK 248
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Query: 31 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
+++ +M+ G DVV Y+ ++ + K LF+EM G++ +V TY I
Sbjct: 312 FMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
++ A +++D M +LG P+ + T+L LC++G++ KA GV +M + +
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
+Y ++ GL + EA L E+M K P TF II + + ++ A ++ +
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Query: 211 IVAKSFA 217
++ K F
Sbjct: 491 MMDKGFT 497
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 93/192 (48%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M + G +PD+V Y ++L+ + + + EM+ G+ D Y+YN + C+ +
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
D+ + ++ +VV+ +TL+ C A + KA + +EM KG+ +N+ TY
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++ + + A LL++M + P + I+ +C+ G +++A + ++
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 216 FAPGARAWEALL 227
P A ++ +L+
Sbjct: 426 ITPDAISYNSLI 437
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG--IVAE 58
M K+G P ++ + ++ + A ++ +M + GI+ D Y +L V+
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
D + + EM G DV +Y+ I C+ + +A ++ + M + G NVVT
Sbjct: 306 PDKC-YNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+L+ A G+ S AK ++ +M G+ + Y +LD L + +A + +M++
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P + +++++I +C+ G + EA++L + + K P
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ I LVK +A+ + ++M+ + Y + +V E + + ++ +M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 73 VLG--LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
+G LIP +TY+ +I+GLCK K D ++ M LG P++ N L LC
Sbjct: 72 PMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ A M +G E ++ +Y I+++GL ++ +A + M++ P +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 191 IICCMCQKGLINEALELM 208
++ +C ++ A E++
Sbjct: 190 LVVGLCHARKVDLAYEMV 207
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V T ++ L K R A+ ++ M GI PD YT +++ + G+
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L ++M G + TYN + GLC +++++Q V+ +++ G PN T + LL A
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ +A ++ E+ +KG E NL +Y ++L G + +A L E+ K F
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ ++ C+C G EA L+ ++ AP + L+
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
D+ L + G KP+V T +L + K + + M+ G+IPD Y +
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N LCK+ V A+Q+V+ M G N VT N L+ LC G L+++ ++ + KG+
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N TY +L+ + EA LL+E++ K P +++ ++ C++G ++A+ L
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 208 MKKIVAKSFAPGARAWEALL 227
+++ AK F ++ LL
Sbjct: 269 FRELPAKGFKANVVSYNILL 288
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 113/228 (49%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G+ + + ++R L +L + ++ Q G+ P+ Y+ +L E
Sbjct: 167 MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG 226
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L DE++V G P++ +YNV + G CK+ + D+A+ + + G K NVV+ N
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK-- 178
LL LC G +A ++ EM ++ TY I+++ L +A +L+EM K
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
F +++++ +I +C++G ++ ++ + +++ + P + A+
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 2/222 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + ++ KE R DA+ + ++ G K +VV Y I+L + +G + + + L
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC--NTLLGAL 125
EM P V TYN+ IN L + ++A+Q++ M K + V N ++ L
Sbjct: 304 LAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARL 363
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G + + EM + + N TY + +++ EA +++ + K
Sbjct: 364 CKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTH 423
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+KG A +L+ ++ F P A + AL+
Sbjct: 424 DFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%)
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
PD+ + + + + + ++ ++S++ G KPNV LL LC+A L KA V
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
++ M G+ + Y +++ L + +G A L+E+M + + T++ ++ +C
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALL 227
G +N++L+ +++++ K AP A + LL
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 28 DALYILNQM--KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
+A YI+ + KQ D Y V++ + +G+ +L EM G PD +TY+
Sbjct: 406 EAFYIIQSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSA 463
Query: 86 YINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
I GLC + A++++ M + CKP V N ++ LC+ A V + M K
Sbjct: 464 LIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
N TY I+++G+ + E+ A +L+E+
Sbjct: 524 KRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I L ++ A +L +M + G PD Y+ ++ G+ EG + E+ M
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 73 -VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
P V +N I GLCK + D A+++ + M++ PN T L+ + +L
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 132 SKAKGVMKEMGLKGV 146
AK V+ E+ L+ V
Sbjct: 546 ELAKEVLDELRLRKV 560
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L Q + G+ P Y ++SG G+Y + E+ M+ P +Y Y I GLC
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K EA I ++ G P+ V T++ CE G L A+ + EM KG+ N
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y +M+ G + EI EML+ + + + +I C G +EA E+ K +
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNM 414
Query: 212 VAKSFAPGARAWEALL 227
P A + AL+
Sbjct: 415 SETGVTPNAITYNALI 430
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I+ L ++ ++A I +K G PD V YT ++ G +G +L
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ EM+ G+ P+ + YNV I+G K+ ++ + M++ G +++CNT++ C
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
G +A + K M GV N TY ++ G + ++ + L +E+
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ G+ P + +T MIR ++ A + +M + G++P+ Y +++ G G+
Sbjct: 309 LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE 368
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ ++EML G + + N I G C K DEA +I +M + G PN +T N
Sbjct: 369 ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNA 428
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
L+ C+ + K + KE+ G++ + Y ++ L
Sbjct: 429 LIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 35/201 (17%)
Query: 51 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+L G + +G VK + F + G P+ Y+ L ++ V+EAI++ + + +G
Sbjct: 118 ILFGALLDGKAVKAAKSF--LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMG 175
Query: 111 CKPNVVTCNT---------------------------------LLGALCEAGDLSKAKGV 137
+VVTCN+ L+ ALC+ GD+S+ +
Sbjct: 176 ISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYEL 235
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
+K+ +G++ + Y ++ G S +L M+ +P + II +C
Sbjct: 236 LKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCM 295
Query: 198 KGLINEALELMKKIVAKSFAP 218
EA + K + K +AP
Sbjct: 296 NKKQLEAYCIFKNLKDKGYAP 316
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +I L + R DA+ ++ ++K+ G D++ Y +++ + +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K+ E+ +M G PD TYN I+ K + ++++ M + G P V T
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ A C G+L +A + K+MGL V N Y I+++ G+A L EEM K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH-SGSD 233
P T++ + C+ +K L+LM ++V +S P E L+ SGSD
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSD 736
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 7/234 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK----QDG--IKPDVVCYTIVLSG 54
M ++ P V+ +I L K R +AL + QM+ DG IK D + + ++ G
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 IVAEGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 113
+ G + +EL M L +P+ TYN I+G C+ K++ A ++V M + KP
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
NVVT NT++G +C L+ A +M +GV+ N+ TY ++ + + +A
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
E+ML+ P + + +I +CQ ++A+ +++K+ F+ A+ L+
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 90/181 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ M+++G+K +VV Y ++ + + K +++ML G PD Y I+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLC+ + +AI++V+ + + G +++ N L+G C+ + K ++ +M +G +
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ TY ++ + ++E+M + P +T+ +I C G ++EAL+L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 209 K 209
K
Sbjct: 640 K 640
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + T I L K R A IL+ + ++ + + +LS + D ++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC------KPNVVTC 118
++L +M + + PDV T + IN LCK +VDEA+++ + M K + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTL+ LC+ G L +A+ ++ M L+ + N TY ++DG ++ A ++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ P T + I+ MC+ +N A+
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + + +I F K + ++ QM++DG+ P V Y V+ + G+
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 61 YVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +LF +M L + P+ YN+ IN K +A+ + + M +PNV T N
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
L L E +M EM + E N T I+++ L G E+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ F +I L K R +A +L +MK ++ P+ V Y ++ G G E+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M + P+V T N + G+C+ + ++ A+ M K G K NVVT TL+ A C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
++ KA ++M G + Y ++ GL +A ++E++ + F ++
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+I C K + E++ + + P + + L+ G
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEG 59
MR+ G P V + +I +AL + M + P+ V Y I+++ G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
++ + L +EM + + P+V TYN L ++ + + ++++D M++ C+PN +T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 120 TLLGALCEAGDLSKAKGVMK 139
L+ L + +L K + M+
Sbjct: 727 ILMERLSGSDELVKLRKFMQ 746
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +I L + R DA+ ++ ++K+ G D++ Y +++ + +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K+ E+ +M G PD TYN I+ K + ++++ M + G P V T
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ A C G+L +A + K+MGL V N Y I+++ G+A L EEM K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH-SGSD 233
P T++ + C+ +K L+LM ++V +S P E L+ SGSD
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSD 736
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 115/234 (49%), Gaps = 7/234 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK----QDG--IKPDVVCYTIVLSG 54
M ++ P V+ +I L K R +AL + +M+ DG IK D + + ++ G
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 IVAEGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 113
+ G + +EL M L P+ TYN I+G C+ K++ A ++V M + KP
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
NVVT NT++G +C L+ A +M +GV+ N+ TY ++ + + +A
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
E+ML+ P + + +I +CQ ++A+ +++K+ F+ A+ L+
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 90/181 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ M+++G+K +VV Y ++ + + K +++ML G PD Y I+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLC+ + +AI++V+ + + G +++ N L+G C+ + K ++ +M +G +
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ TY ++ + ++E+M + P +T+ +I C G ++EAL+L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 209 K 209
K
Sbjct: 640 K 640
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + T I L K R A IL+ + ++ + + +LS + D ++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC------KPNVVTC 118
++L +M + + PDV T + IN LCK +VDEA+++ + M K + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTL+ LC+ G L +A+ ++ M L + N TY ++DG ++ A ++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ P T + I+ MC+ +N A+
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + + +I F K + ++ QM++DG+ P V Y V+ + G+
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 61 YVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +LF +M L + P+ YN+ IN K +A+ + + M +PNV T N
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
L L E +M EM + E N T I+++ L G E+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ F +I L K R +A +L +MK ++ P+ V Y ++ G G E+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M + P+V T N + G+C+ + ++ A+ M K G K NVVT TL+ A C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
++ KA ++M G + Y ++ GL +A ++E++ + F ++
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+I C K + E++ + + P + + L+ G
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEG 59
MR+ G P V + +I +AL + M + P+ V Y I+++ G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
++ + L +EM + + P+V TYN L ++ + + ++++D M++ C+PN +T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 120 TLLGALCEAGDLSKAKGVMK 139
L+ L + +L K + M+
Sbjct: 727 ILMERLSGSDELVKLRKFMQ 746
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I L K+ AL +L M G PDV+ Y V+ + G+ +
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + L G P + TY V + +C+ AI++++ M GC P++VT N+L+
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY 288
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G+L + V++ + G+ELN TY +L L E +L M + + P
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I +C+ L++ A++ +++ + P + +L
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + +CP V+ + +I L K A+ QM + PD+V Y VL + EG
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG- 398
Query: 61 YVKLDELFDEMLVLGLI------PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ D + +LGL+ P + TYN I+GL K+ + +A+++ M+ G P+
Sbjct: 399 -----MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
+T +L+ C A + +A V+KE +G + TYR+++ GL K EI A ++E
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
ML P + + I+ + + G+ +EA+
Sbjct: 514 IMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 7 CPGVM-DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
CP M +T ++ + + A+ +L M +G PD+V Y +++ G+ ++
Sbjct: 240 CPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVA 299
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ +L GL + TYN ++ LC DE +I++ M + P V+T N L+ L
Sbjct: 300 SVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGL 359
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+A LS+A +M + ++ TY +L + + + +A LL + C P
Sbjct: 360 CKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGL 419
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T++++I + +KGL+ +ALEL +++ P
Sbjct: 420 ITYNSVIDGLAKKGLMKKALELYHQMLDAGIFP 452
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 105/215 (48%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ ++ L E + ILN M Q P V+ Y I+++G+ + + F +ML
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+PD+ TYN + + K+ VD+AI+++ + C P ++T N+++ L + G +
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
KA + +M G+ + T R ++ G + EA +L+E + R ST+ +I
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+K I A+E+++ ++ P + A++
Sbjct: 497 QGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
D T N ++ LC K+ +A ++V+ M + P+ +C+ L+ L L KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
+ M + G + TY +++ L K I A +LLE+M P T++ +I CM
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 199 GLINEALELMKKIVAKSFAP 218
G +A+ K + P
Sbjct: 223 GNAEQAIRFWKDQLQNGCPP 242
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 84/177 (47%)
Query: 51 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+L + + G +L + M +P + + + GL + +++D+A+ I+ M+ G
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
P+ +T N ++G LC+ G + A ++++M L G ++ TY ++ + +A
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ L+ P T+ ++ +C+ A+E+++ + + P + +L+
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G CP V +T MIR K+ A+ + M G++PD YT +++G G
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GT 415
Query: 61 YVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
KLD EL EM G PD TYN I + Q + +I + MI+ +P++ T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N ++ + A + + V EM KG+ + ++Y +++ GL+ + + EA LEEML
Sbjct: 476 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Query: 178 KK 179
K
Sbjct: 536 DK 537
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 15/225 (6%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K F P +M +T ++ + ++A I N M G+KPD+V + ++L G++
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 350
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+LF M G P+V +Y + I CKQ+ ++ AI+ D M+ G +P+ L+
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
L ++KEM KG + TY ++ + + + + +M++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ I + VA+++ G W+ ++
Sbjct: 471 PSIHTFNMI---------------MKSYFVARNYEMGRAVWDEMI 500
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K F GV ++ L + + G +A + +++K+ P+++ YT++L+G +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRN 313
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ ++++M+ GL PD+ +NV + GL + K +AI++ M G PNV +
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ + A +M G++ + Y ++ G + ++ LL+EM +K
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I M + + + K++ P + ++
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ M+ L++ + DA+ + + MK G P+V YTI++ +
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E FD+M+ GL PD Y I G Q K+D +++ M + G P+ T N L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGKAEIGEASLLLEEMLKKCFY 182
+ + +M +E ++HT+ +++ + E+G A + +EM+KK
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA--VWDEMIKKGIC 505
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P +++ +I + +G EA +++++ K
Sbjct: 506 PDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + +I+ + ++ I N+M Q+ I+P + + +++ +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y ++DEM+ G+ PD +Y V I GL + K EA + ++ M+ G K ++ N
Sbjct: 489 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 121 LLGALCEAG 129
G
Sbjct: 549 FAADFHRGG 557
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 2/230 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ GF + M+ L K + + +L +M G+ + +TI + A +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 246
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K +F+ M V T N ++ L + K+ + Q++ +K PN++T LL
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C +L +A + +M G++ ++ + +ML+GL+ + +A L M K
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P ++ +I C++ + A+E +V P A + L+ G+
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G CP V +T MIR K+ A+ + M G++PD YT +++G G
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GT 414
Query: 61 YVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
KLD EL EM G PD TYN I + Q + +I + MI+ +P++ T
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N ++ + A + + V EM KG+ + ++Y +++ GL+ + + EA LEEML
Sbjct: 475 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Query: 178 KK 179
K
Sbjct: 535 DK 536
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 15/225 (6%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K F P +M +T ++ + ++A I N M G+KPD+V + ++L G++
Sbjct: 290 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 349
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+LF M G P+V +Y + I CKQ+ ++ AI+ D M+ G +P+ L+
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
L ++KEM KG + TY ++ + + + + +M++
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ I + VA+++ G W+ ++
Sbjct: 470 PSIHTFNMI---------------MKSYFVARNYEMGRAVWDEMI 499
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K F GV ++ L + + G +A + +++K+ P+++ YT++L+G +
Sbjct: 254 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRN 312
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ ++++M+ GL PD+ +NV + GL + K +AI++ M G PNV +
Sbjct: 313 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 372
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ + A +M G++ + Y ++ G + ++ LL+EM +K
Sbjct: 373 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I M + + + K++ P + ++
Sbjct: 433 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ M+ L++ + DA+ + + MK G P+V YTI++ +
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E FD+M+ GL PD Y I G Q K+D +++ M + G P+ T N L+
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGKAEIGEASLLLEEMLKKCFY 182
+ + +M +E ++HT+ +++ + E+G A + +EM+KK
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA--VWDEMIKKGIC 504
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P +++ +I + +G EA +++++ K
Sbjct: 505 PDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + +I+ + ++ I N+M Q+ I+P + + +++ +
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y ++DEM+ G+ PD +Y V I GL + K EA + ++ M+ G K ++ N
Sbjct: 488 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 547
Query: 121 LLGALCEAG 129
G
Sbjct: 548 FAADFHRGG 556
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 2/230 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ GF + M+ L K + + +L +M G+ + +TI + A +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 245
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K +F+ M V T N ++ L + K+ + Q++ +K PN++T LL
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLL 304
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C +L +A + +M G++ ++ + +ML+GL+ + +A L M K
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P ++ +I C++ + A+E +V P A + L+ G+
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 17 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV-LG 75
+R L + R +A ++ ++ + PD Y +L + D + E DEM
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ PD+ ++ + I+ +C + EA+ +V + G KP+ NT++ C S+A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
GV K+M +GVE + TY ++ GL + EA + L+ M+ + P ++T+ +++ M
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+KG AL L++++ A+ AP + LL
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 1/177 (0%)
Query: 32 ILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
+++M+ D +KPD+V +TI++ + + + L ++ G PD + YN + G
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
C +K EA+ + M + G +P+ +T NTL+ L +AG + +A+ +K M G E +
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT 335
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
TY +++G+ K E A LLEEM + P T++ ++ +C+ L+++ +EL
Sbjct: 336 ATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMEL 392
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ FT +I + + +A+Y+++++ G KPD Y ++ G + +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +M G+ PD TYN I GL K +V+EA + +M+ G +P+ T +L+ +C
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP-RSS 186
G+ A +++EM +G N TY +L GL KA + + + L EM+K S+
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC-KARLMDKGMELYEMMKSSGVKLESN 406
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+ ++ + + G + EA E+ V A A+ L
Sbjct: 407 GYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +++ +G +A+ + +MK++G++PD + Y ++ G+ G +
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
M+ G PD TY +NG+C++ + A+ +++ M GC PN T NTLL
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
LC+A + K + + M GV+L + Y ++ LV ++ EA
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + +I L K R +A L M G +PD YT +++G+ +G+
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L +EM G P+ TYN ++GLCK +D+ +++ + M G K T
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 121 LLGALCEAGDLSKA 134
L+ +L ++G +++A
Sbjct: 411 LVRSLVKSGKVAEA 424
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 17 IRFLVKEERGMDALYILNQMKQDGIKP-DVVCYTIVLSG---IVAEGDYVKLDELFDEML 72
+R K DA + N + P D+ + VL I D VKL F +L
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKL---FQHIL 112
Query: 73 --VLGLIPDVYTYNVYINGLCK--QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
P T+ + ++ C+ + + ++++ M+ G +P+ VT + + +LCE
Sbjct: 113 KSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 172
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FYPRSST 187
G + +AK +MKE+ K + +TY +L L ++ ++EM P +
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
F +I +C + EA+ L+ K+ F P
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 110/206 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ +T ++ L + + + ++ +++ +G + D V Y+ + G G V
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM+ G+ DV +Y++ I+GL K+ V+EA+ ++ MIK G +PN++T ++ LC+
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L +A + + G+E++ Y ++DG+ K + A +L +M ++ P T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 188 FDNIICCMCQKGLINEALELMKKIVA 213
++ +I +C G ++EA E+ K +V
Sbjct: 385 YNTVINGLCMAGRVSEADEVSKGVVG 410
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 40/254 (15%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V+ ++ +I L KE +AL +L +M ++G++P+++ YT ++ G+ G
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF+ +L +G+ D + Y I+G+C++ ++ A ++ M + G +P+++T NT
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-------------- 166
++ LC AG +S+A V KGV ++ TY +LD + I
Sbjct: 388 VINGLCMAGRVSEADEVS-----KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Query: 167 ---------------------GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
GEA L M + P ++T+ +I C+ G I EAL
Sbjct: 443 IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Query: 206 ELMKKIVAKSFAPG 219
E+ ++ S +
Sbjct: 503 EMFNELRKSSVSAA 516
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 110/229 (48%), Gaps = 11/229 (4%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+ G + + +I L ++ ++AL + + ++ G+ P V Y I++ + EG +
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLF 741
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ ++L D M+ GL+P++ YN ++G CK + ++A+++V + P+ T +++
Sbjct: 742 LDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK-- 179
+ C+ GD+ +A V E K + + + ++ G K + EA LL EML
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSES 861
Query: 180 ---------CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
S + + +C++G + +A++++ +I + + G
Sbjct: 862 VVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSG 910
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+D+T +I L KE + AL + + K G+ + + Y +++G+ +G V+ LFD
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+ +GL+P TY + I+ LCK+ +A +++DSM+ G PN++ N+++ C+ G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
A V+ + V + T M+ G K ++ EA + E K F
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 190 NIICCMCQKGLINEALELMKKIV 212
+I C KG + EA L+++++
Sbjct: 835 FLIKGFCTKGRMEEARGLLREML 857
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 1/205 (0%)
Query: 14 TDMIRFLVKEERGMDA-LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +++ LV R +DA L ++N + DV+ YTI+++G+ EG VK L
Sbjct: 623 STILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAK 682
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G+ + TYN INGLC+Q + EA+++ DS+ +G P+ VT L+ LC+ G
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A+ ++ M KG+ N+ Y ++DG + +A ++ + P + T ++I
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 193 CCMCQKGLINEALELMKKIVAKSFA 217
C+KG + EAL + + K+ +
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNIS 827
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK---PDVVCYTIVLSGIVA 57
+R G P + F +I V++ +A+ +L M + + VC + V+SG
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC-SAVISGFCK 183
Query: 58 EGDYVKLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
G F+ + G L+P++ TY ++ LC+ KVDE +V + G + + V
Sbjct: 184 IGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCV 243
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ + + G L A +EM KG+ ++ +Y I++DGL + + EA LL +M
Sbjct: 244 FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+K+ P T+ II +C+ G + EA L +I++
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 25/242 (10%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V+ ++ ++ +K + L I + + I D+V I+L + G Y +
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D L+ M + L PD TY I G CK +++EA+++ + + K V N ++ A
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDA 525
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL-----LEEMLKK 179
LC+ G L A V+ E+ KG+ L++HT R +L + A G+ +L LE++
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI--HANGGDKGILGLVYGLEQLNSD 583
Query: 180 -CFYPRSSTFDNIICCMCQKGLINEALE---LMKK---------IVAKSFAPGARAWEAL 226
C ++ I +C++G A+E +M++ + K+ R+ +A
Sbjct: 584 VCL----GMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAY 639
Query: 227 LL 228
LL
Sbjct: 640 LL 641
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL---GLIPDVYTYNVYINGLCKQNKVDEA 99
P++V YT ++S + G K+DE+ D + L G D Y+ +I+G K + +A
Sbjct: 205 PNLVTYTTLVSALCQLG---KVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA 261
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+ M++ G +VV+ + L+ L + G++ +A G++ +M +GVE NL TY ++ G
Sbjct: 262 LMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L ++ EA +L +L + +I +C+KG +N A ++ + + P
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Query: 220 ARAWEALL 227
+ ++
Sbjct: 382 ILTYNTVI 389
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%)
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
DV Y + INGLCK+ + +A+ + G N +T N+L+ LC+ G L +A +
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
+ G+ + TY I++D L + +A LL+ M+ K P +++I+ C+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
G +A+ ++ + + P A +++
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
R +A +L +MK GI PDV+ YT ++ G +G V +L DEM+ G+ PD+ TYN
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
V ++GL + +E ++I + M G KPN VT + ++ LC A + +A+ + K
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
E N ++ + G E G + + ++ + R S + + +C +G + +A
Sbjct: 523 CPE-NKASF------VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKA 575
Query: 205 LELMKKIVAKSFAPG 219
+++KK+ A PG
Sbjct: 576 HDVLKKMSAYRVEPG 590
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 30/256 (11%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P V+++T +I + + +DAL ++++M +G+ PD++ Y +++SG+ G
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT--- 117
++ E+++ M G P+ T +V I GLC KV EA S+ + C N +
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL-EQKCPENKASFVK 532
Query: 118 --CNT------------------------LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
C L +LC G L KA V+K+M VE
Sbjct: 533 GYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS 592
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
M+ + EA +L + M+++ P T+ +I C+ + +A L + +
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Query: 212 VAKSFAPGARAWEALL 227
+ P + LL
Sbjct: 653 KQRGIKPDVVTYTVLL 668
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS------- 53
M + G P + +T MI + A + MKQ GIKPDVV YT++L
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDP 676
Query: 54 ------GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
+ E K E+ E G+ DV Y V I+ CK N +++A ++ D MI
Sbjct: 677 EHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMI 736
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
G +P++V TL+ + G + A ++ E+ K
Sbjct: 737 DSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD------ELFDEMLVLGLIPDVY 81
+AL L++M G+K + V +++L Y K+D E F E + + D
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQC------YCKMDMCLEALEKFKEFRDMNIFLDRV 389
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
YNV + L K +V+EA +++ M G P+V+ TL+ C G + A ++ EM
Sbjct: 390 CYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEM 449
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G+ +L TY +++ GL E + E M + P + T II +C +
Sbjct: 450 IGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKV 509
Query: 202 NEALELMKKIVAK 214
EA + + K
Sbjct: 510 KEAEDFFSSLEQK 522
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 27/200 (13%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + + M + G+ PD+ YTI++ + K + LF++M G+ PDV TY V
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV-- 666
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG--VMKEMGLKG 145
++D +KL + + TC+ G++ K K V++E G
Sbjct: 667 --------------LLDRYLKLDPEHH-ETCSV-------QGEVGKRKASEVLREFSAAG 704
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ L++ Y +++D + +A+ L + M+ P + +I +KG I+ A+
Sbjct: 705 IGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAV 764
Query: 206 ELMKKIVAKSFAPGARAWEA 225
L+ ++ K P + ++EA
Sbjct: 765 TLVTELSKKYNIP-SESFEA 783
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 50 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
+V+ G E + + EM +G DVY I+ CK + EA+ +D M+
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 110 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
G K N V + +L C+ +A KE + L+ Y + D L + EA
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
LL+EM + P + +I C +G + +AL+L+ +++ +P + L+
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 13/193 (6%)
Query: 48 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
Y + + EG K ++ +M + P I CK N V EA + D+M+
Sbjct: 559 YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG----- 162
+ G P++ T ++ C +L KA+ + ++M +G++ ++ TY ++LD +
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 163 ------KAEIG--EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ E+G +AS +L E + +I C+ + +A EL +++
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 215 SFAPGARAWEALL 227
P A+ L+
Sbjct: 739 GLEPDMVAYTTLI 751
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML--------VLGLIPDV 80
AL L Q+K+ G+ P+V Y ++ + G +KLD + E++ V+ LI +
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVI 132
Query: 81 --------------YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ DEA ++ +L C ++ CN L+ +
Sbjct: 133 GEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMT 192
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
E G + + K++ G+ N +TY I++ L K + EA++LL E S
Sbjct: 193 EFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE--------NES 244
Query: 187 TF--DNIICCMCQKGLINEALELMKKIVAKSFAPG 219
F I +C G +A+ L+ +++ + + G
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALILELIDRKYLAG 279
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ + RF + EE M LY +M +D + PD+ + +++G G V+ + ++
Sbjct: 127 LSSLARFGLVEE--MKRLY--TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G PD +TY +I G C++ +VD A ++ M + GC N V+ L+ L EA +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A ++ +M N+ TY +++D L G + EA L ++M + P + +I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C ++EA L++ ++ P + AL+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALI 337
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%)
Query: 47 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
CY +LS + G ++ L+ EML + PD+YT+N +NG CK V EA Q V +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
I+ GC P+ T + + C ++ A V KEM G N +Y ++ GL +I
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 167 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
EA LL +M P T+ +I +C G +EA+ L K++ P
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP V +T +I L + +A+ + QM + GIKPD YT+++ + GD LDE
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS-GD--TLDE 313
Query: 67 ---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L + ML GL+P+V TYN I G CK+N V +A+ ++ M++ P+++T NTL+
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
C +G+L A ++ M G+ N T
Sbjct: 373 GQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +T I + + A + +M Q+G + V YT ++ G+ K+DE
Sbjct: 188 PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAK---KIDEA 244
Query: 68 FDEMLVL---GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + P+V TY V I+ LC + EA+ + M + G KP+ L+ +
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C L +A G+++ M G+ N+ TY ++ G K + +A LL +ML++ P
Sbjct: 305 FCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPD 363
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
T++ +I C G ++ A L+ + P R
Sbjct: 364 LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK--PDVVCYTIVLSGIVAEG------ 59
P V + +I L + A ++L+QM+ G + PD YTI++S G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 60 -----DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ + +F EML G +PDV TYN I+G CK N++ A+++ + M GC PN
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEM-----GLKGVELNLHTYRIMLDGLVGKAEIGEA 169
VT N+ + ++ A +M+ M G+ G TY ++ LV EA
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSS----TYTPLIHALVETRRAAEA 373
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
L+ EM++ PR T+ + + +GL + E + K
Sbjct: 374 RDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHK 414
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTY 153
V EA+ M + CKP+V NT++ ALC G+ KA+ ++ +M L G + +TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 154 RIMLDGLVG-----------KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
I++ + + EA+ + EML + F P T++ +I C+ I
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 203 EALELMKKIVAKSFAPGARAWEALLLH 229
ALEL + + K P + + + +
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRY 327
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G P + Y+ + + + EG V+ +E+ M G P + Y + LC+ K+ EA
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 100 IQIVD-SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK-GVELNLHTYRIML 157
+ +++ M++ C P V N L+ LC+ G +A G +K+M + N TY+ ++
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
DGL + EAS ++EEML K +P T+ +I +C EA+ ++++V++
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 218 PGARAWEAL 226
P + W+AL
Sbjct: 473 PESSVWKAL 481
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ M L +E + ++ +L M+ G +P Y + + G KL
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG---KL 349
Query: 65 DE----LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCN 119
E + EM+ +P V YNV I GLC K EA+ + M K + C N T
Sbjct: 350 KEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ LC G +A VM+EM +K + TY +M+ GL EA + LEEM+ +
Sbjct: 410 TLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Query: 180 CFYPRSSTFDNIICCMC 196
P SS + + +C
Sbjct: 470 DMVPESSVWKALAESVC 486
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSG---IVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
DA+ IL ++ + G+K CY + +G +EG ++ L E L+ G IP + +Y+
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG-IERVKRLLTETLIRGAIPCLDSYS 302
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
L ++ K+ E +++ +M G +P + ALC AG L +A V+ + ++
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 145 GVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNIICCMCQKGLIN 202
G L + Y +++ GL + EA L++M K+ T+ ++ +C+ G
Sbjct: 363 GHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFL 422
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
EA ++M++++ KS PG + ++
Sbjct: 423 EASQVMEEMLIKSHFPGVETYHMMI 447
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE-------LF 68
+++ L + R A + +M G PD Y I++ G EG KL+E +F
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG---KLEEATHLLYSMF 214
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+ G D+ Y + ++ LC +VD+AI+I+ +++ G K + + E+
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 129 GD--LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + K ++ E ++G L +Y M L + ++ E +L M K F P
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 187 TFDNIICCMCQKGLINEALELMKK 210
+ + +C+ G + EA+ ++ K
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINK 358
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 95/220 (43%), Gaps = 7/220 (3%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ MI L K R ++ Y++ +MK+D + + V+ G LF +
Sbjct: 49 YATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLH 108
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN--VVTCNTLLGALCEAGD 130
+ +++ + + K+++++ A I G + N + N L+ LC+
Sbjct: 109 EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC-YGWEVNSRITALNLLMKVLCQVNR 167
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS---- 186
A V +EM +G + +YRI++ G + ++ EA+ LL M + S
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+ ++ +C G +++A+E++ KI+ K R + +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G P + Y+ + + + EG V+ +E+ M G P + Y + LC+ K+ EA
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 100 IQIVD-SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK-GVELNLHTYRIML 157
+ +++ M++ C P V N L+ LC+ G +A G +K+M + N TY+ ++
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
DGL + EAS ++EEML K +P T+ +I +C EA+ ++++V++
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 218 PGARAWEAL 226
P + W+AL
Sbjct: 473 PESSVWKAL 481
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ M L +E + ++ +L M+ G +P Y + + G KL
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG---KL 349
Query: 65 DE----LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCN 119
E + EM+ +P V YNV I GLC K EA+ + M K + C N T
Sbjct: 350 KEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ LC G +A VM+EM +K + TY +M+ GL EA + LEEM+ +
Sbjct: 410 TLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Query: 180 CFYPRSSTFDNIICCMC 196
P SS + + +C
Sbjct: 470 DMVPESSVWKALAESVC 486
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSG---IVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
DA+ IL ++ + G+K CY + +G +EG ++ L E L+ G IP + +Y+
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG-IERVKRLLTETLIRGAIPCLDSYS 302
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
L ++ K+ E +++ +M G +P + ALC AG L +A V+ + ++
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 145 GVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNIICCMCQKGLIN 202
G L + Y +++ GL + EA L++M K+ T+ ++ +C+ G
Sbjct: 363 GHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFL 422
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
EA ++M++++ KS PG + ++
Sbjct: 423 EASQVMEEMLIKSHFPGVETYHMMI 447
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE-------LF 68
+++ L + R A + +M G PD Y I++ G EG KL+E +F
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG---KLEEATHLLYSMF 214
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+ G D+ Y + ++ LC +VD+AI+I+ +++ G K + + E+
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 129 GD--LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + K ++ E ++G L +Y M L + ++ E +L M K F P
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 187 TFDNIICCMCQKGLINEALELMKK 210
+ + +C+ G + EA+ ++ K
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINK 358
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 95/220 (43%), Gaps = 7/220 (3%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ MI L K R ++ Y++ +MK+D + + V+ G LF +
Sbjct: 49 YATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLH 108
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN--VVTCNTLLGALCEAGD 130
+ +++ + + K+++++ A I G + N + N L+ LC+
Sbjct: 109 EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC-YGWEVNSRITALNLLMKVLCQVNR 167
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS---- 186
A V +EM +G + +YRI++ G + ++ EA+ LL M + S
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+ ++ +C G +++A+E++ KI+ K R + +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P ++ + ++ G +A + M GI PD+ Y+ ++
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K+ +L EM G +PD+ +YNV + K + EA+ + M GC PN T +
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL ++G + + EM + + TY I+++ E L +M+++
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++ II + GL +A ++++ + A P ++A+ ++ G Y E
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 241 FA 242
A
Sbjct: 478 VA 479
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDA---LYILNQMKQDGIKPDVVCYTIVLSGIVA 57
M+ P ++ + +I + G+D L + +M+ +GI+PD+V Y +LS
Sbjct: 202 MKNEKISPSILTYNTVINACARG--GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
G + + +F M G++PD+ TY+ + K ++++ ++ M G P++ +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N LL A ++G + +A GV +M G N +TY ++L+ + L EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
P ++T++ +I + G E + L +V ++ P +E ++ G
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 1 MRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M++ +C P +T MI L +E L + ++M G+ V YT +++ G
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA--IQIVDSMIKLGCKPNVVT 117
Y EL D M + P + TYN IN C + +D + + M G +P++VT
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTLL A G +A+ V + M G+ +L TY +++ + + LL EM
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++++ ++ + G I EA+ + ++ A P A + LL
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 91/208 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ K +A+ + +QM+ G P+ Y+++L+ G Y +
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF EM PD TYN+ I + E + + M++ +P++ T ++ A
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G A+ +++ M + + Y +++ A EA + M + P
Sbjct: 432 CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPS 491
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIV 212
TF +++ + GL+ E+ ++ ++V
Sbjct: 492 IETFHSLLYSFARGGLVKESEAILSRLV 519
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 98/254 (38%), Gaps = 37/254 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P ++ ++ + R D + +MK PD Y I++ + EG
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE-VFGEGG 401
Query: 61 YVK-LDELFDEMLVLGLIPDVYTYNVYI---------------------NGLCKQNKV-- 96
Y K + LF +M+ + PD+ TY I N + +K
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Query: 97 ------------DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+EA+ ++M ++G P++ T ++LL + G + +++ ++ +
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ N T+ ++ + EA +M K P T + ++ L++E
Sbjct: 522 GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDEC 581
Query: 205 LELMKKIVAKSFAP 218
E +++ A P
Sbjct: 582 REQFEEMKASDILP 595
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P F + + + L +M+++G +PD+V Y ++S G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ M ++PD+ TY I GLCK +V EA Q M+ G KP+ ++ NT
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A C+ G + ++K ++ EM V + T +++++G V + + A + E+ +
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
D +I +CQ+G A L+ +I+ +
Sbjct: 407 VDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE 440
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+++ M +G+ P+ YT+N+ N C + E ++ M + G +P++VT NTL+ +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C G L +A + K M + V +L TY ++ GL + EA M+ + P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+++ +I C++G++ ++ +L+ +++ S P
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP 374
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P ++ + ++ + R +A Y+ M + + PD+V YT ++ G+ +G
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + F M+ G+ PD +YN I CK+ + ++ +++ M+ P+ TC
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV 381
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ G L A + E+ V++ ++ L + + A LL+ ++++
Sbjct: 382 IVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEE 441
Query: 181 FY-PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + T++N+I + + I EAL L K+ ++ A+ + AL+
Sbjct: 442 GHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALI 489
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
D + + M + GI P+ + I+ + + ++ ++D+ ++M G PD+ TYN +
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ C++ ++ EA + M + P++VT +L+ LC+ G + +A M +G++
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
+ +Y ++ + + ++ LL EML P D C + +G + E
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP-----DRFTCKVIVEGFVRE 389
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + MI+ + + I+ +M++ GIKP+ + +++SG AE ++
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ M G+ V TYN+ I LCK+ K EA ++D M+ G KPN VT + L+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C D +AK + K M +G + + Y ++ L + A L +E ++K + P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
S +++ + + + EA EL+ ++ K F W
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRNVELW 399
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P F MI E++ + +L MK G+ V Y I + +
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D ML G+ P+ TY+ I+G C ++ +EA ++ M+ GCKP+ T
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ LC+ GD A + KE K + + +++GL +++ EA L+ ++ +K
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 1/202 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL-GLIPDVYTYNVYI 87
+L + +++ I V +L + DY + ++ EM + G+ PD+ TYN I
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
C+ + IV M + G KPN + ++ + V+ M +GV
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ + TY I + L + + EA LL+ ML P + T+ ++I C + EA +L
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 208 MKKIVAKSFAPGARAWEALLLH 229
K +V + P + + L+ +
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYY 336
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G+ PD V YT V+ G + G + L+DEML L P V TY V I G K ++++A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
Q M K G +PNV+T N LL +C+AG++ +A + +M +G+ N ++Y +++
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ E L +EML K P T
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 8/225 (3%)
Query: 5 GFCPGVMDFTDMIR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P V+ F M+ F + +D +++ +MK+ I+ V Y I+++G G
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWL--EMKRRNIEFSEVTYNILINGFSKNGKME 290
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +M G Y++N I G CKQ D+A + D M+ G P T N +
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
ALC+ G + A+ ++ M V +Y ++ G + + EASLL +++ +
Sbjct: 351 CALCDFGRIDDARELLSSMAAPDVV----SYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I +C+ G + A L +++ + P + L+
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%)
Query: 39 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
D PD+ Y + + G+ G+ VK E ++ +GL+PD TY I G + +
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A + D M++ P+V+T L+ +AG L +A EM +GV N+ T+ +L
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
G+ I EA L +M ++ P ++ +I C E ++L K+++ K P
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 219 GARAWEALLLHSGSDLTYSETTF 241
AL H D E F
Sbjct: 689 DGYTHRALFKHLEKDHESREVEF 711
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA +L+ M PDVV Y ++ G + G +V+ LFD++ + P + TYN I
Sbjct: 361 DARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+GLC+ ++ A ++ + M P+V+T TL+ + G+LS A V EM KG++
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI-ICCMCQKGLINEALE 206
+ + Y G + + +A L EEM+ + T N+ I +C+ G + +A+E
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 207 LMKKIVAKSFAP 218
+KI P
Sbjct: 537 FQRKIFRVGLVP 548
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M++ G + ++ G +G + + DEML G+ P TYN+YI LC +
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+D+A +++ SM P+VV+ NTL+ + G +A + ++ + ++ TY
Sbjct: 359 IDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++DGL + A L EEM + +P T+ ++ + G ++ A E+ +++ K
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 216 FAPGARAW 223
P A+
Sbjct: 475 IKPDGYAY 482
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 35/181 (19%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M+ G +P V N+ + L +++A + ++MI+ G P V+T NT+L + +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL--------------- 172
AGDL + + EM + +E + TY I+++G ++ EA
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 173 --------------------LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+EML YP +ST++ IC +C G I++A EL+ +
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 213 A 213
A
Sbjct: 371 A 371
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++G P + +T +IR ++ + A + ++M + + P V+ Y +++ G G
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ + EM G+ P+V T+N + G+CK +DEA + + M + G PN + L+
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
C+ + + KEM K +E + +T+R + L E E L
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
ML + P TYN I+G CKQ++VD+A +++DSM GC P+VVT +TL+ C+A
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ + EM +G+ N TY ++ G ++ A LL EM+ P TF
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 191 IICCMCQKGLINEALELMKKI 211
++ +C K + +A +++ +
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
I P + Y ++ G + + D M G PDV T++ ING CK +VD
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
++I M + G N VT TL+ C+ GDL A+ ++ EM GV + T+ ML G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 160 LVGKAEIGEASLLLEEMLK 178
L K E+ +A +LE++ K
Sbjct: 125 LCSKKELRKAFAILEDLQK 143
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ F+ +I K +R + + I +M + GI + V YT ++ G GD
Sbjct: 36 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 95
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 108
+L +EM+ G+ PD T++ + GLC + ++ +A I++ + K
Sbjct: 96 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P F ++ LV + + I + G++ D C I++ G+ G+
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DE P+V T++ I G C + K +EA ++++ M K +P+ +T N
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L + G + + +++ M +KG E N TY+ +L GL+ K EA ++ +M+
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
P ++ ++ +C+ + E +++++V F P W
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 91/171 (53%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L++ Q +P+V+ ++ ++ G +G + + +L + M + PD T+N+ I+
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GL K+ +V+E I +++ M GC+PN T +L L + +AK +M +M G+
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
+ +Y+ M+ GL + E +L +M+ F P++ + ++ C+ K
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKN 391
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 99/200 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ IL M G P + +L+ +V+ + ++ ++F LG+ D N+ I
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLC+ ++ A+Q++D + +PNV+T + L+ C G +A +++ M + +E
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T+ I++ GL K + E LLE M K P T+ ++ + K EA E+M
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 209 KKIVAKSFAPGARAWEALLL 228
++++ P +++ ++L
Sbjct: 331 SQMISWGMRPSFLSYKKMVL 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
+++ AI+I+ M GC P+ + N +L L A + + GVE++
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
I++ GL + A LL+E ++ P TF +I C KG EA +L++++ +
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 215 SFAP 218
P
Sbjct: 267 RIEP 270
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG + + + + +++ R M A N+M +G++P Y ++L G
Sbjct: 211 MKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLR 270
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
F++M G+ PD T+N ING C+ K+DEA ++ M P+VV+ T
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ + + +EM G+E N TY +L GL ++ EA +L+ M+ K
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Query: 181 FYPR-SSTFDNIICCMCQKGLINEALELMKKIVA 213
P+ +S F ++ + G + A E++K +
Sbjct: 391 IAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMAT 424
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 94/191 (49%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+++ I +MK G++ + Y + I+ G Y+ F++M+ G+ P +TYN+ +
Sbjct: 203 ESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLML 262
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G +++ A++ + M G P+ T NT++ C + +A+ + EM +
Sbjct: 263 WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIG 322
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ +Y M+ G + + + + EEM P ++T+ ++ +C G + EA +
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 208 MKKIVAKSFAP 218
+K ++AK AP
Sbjct: 383 LKNMMAKHIAP 393
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 82/288 (28%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI------------ 55
P V+ +T MI+ + +R D L I +M+ GI+P+ Y+ +L G+
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 56 ------------------------VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
GD E+ M L + + Y V I C
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 92 KQNKVDEAIQIVDSMIK----------LGCKPNVVTCNTLLGALCEAGDLSKA------- 134
K + + AI+++D++I+ L +P+ N ++ LC G +KA
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY--NPIIEYLCNNGQTAKAEVLFRQL 500
Query: 135 ---------------KGVMKE------------MGLKGVELNLHTYRIMLDGLVGKAEIG 167
+G KE M +GV + Y +++ + K E G
Sbjct: 501 MKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPG 560
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+A L+ M++ P SS F ++I + + G + A +M ++ K+
Sbjct: 561 DAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKN 608
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G+ D + V I K V E+++I M LG + + + N+L + G A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
K +M +GVE HTY +ML G + A E+M + P +TF+ +I
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+ ++EA +L ++ P ++ ++
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G P + + +I K + L + + M+++ I D+ +V+ +
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 616
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F+ ++ + PD+ TYN I G C ++DEA +I + + PN VT
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ D+ A + M KG + N TY ++D +I + L EEM +K
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ II +C++G ++EA + + + P A+ L+
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L K R DA N + + ++PD+V Y ++ G + + + +F+ + V
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
P+ T + I+ LCK N +D AI++ M + G KPN VT L+ ++ D+ +
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ +EM KG+ ++ +Y I++DGL + + EA+ + + + P + +I
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 196 CQKGLINEALELMKKIVAKSFAP 218
C+ G + EA L + ++ P
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKP 809
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ +T +I+ L ++ R +A + Q+ + G++P +V Y+ ++ G G+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+++M+ +G PDV Y V ++GL KQ + A++ M+ + NVV N+L+
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C +A V + MG+ G++ ++ T+ ++ + + + EA L M K P
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 185 SSTFDNIICCMCQK 198
+ + +I C+
Sbjct: 566 ALAYCTLIDAFCKH 579
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 91/178 (51%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +Q G+K DVV ++ + V GD ++ ML G+ P+V TY + I GLC
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ ++ EA + ++K G +P++VT ++L+ C+ G+L + ++M G ++
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
Y +++DGL + + A +ML + F+++I C+ +EAL++ +
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ F+ I VK A + +M GI P+VV YTI++ G+ +G + ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
++L G+ P + TY+ I+G CK + + + MIK+G P+VV L+ L + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ A +M + + LN+ + ++DG EA + M P +TF
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +G + EAL L ++ P A A+ L+
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ F +I K A + M+Q GI+PD++ Y+ ++ G G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF + L G+ DV ++ I+ K + A + M+ G PNVVT L+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G + +A G+ ++ +G+E ++ TY ++DG + L E+M+K + P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ + ++GL+ A+ K++ +S + +L+
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
+ G + +V VL G+ + V L +L G P+V T+ ING CK+ ++D
Sbjct: 245 ERGFRVGIVSCNKVLKGLSVDQIEVA-SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
A + M + G +P+++ +TL+ +AG L + + KGV+L++ + +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
D V ++ AS++ + ML + P T+ +I +CQ G I EA + +I+ +
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 218 PGARAWEALL 227
P + +L+
Sbjct: 424 PSIVTYSSLI 433
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ F +I + R +AL + M GIKPDV +T V+ + EG + LF
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M +GL PD Y I+ CK K +Q+ D M + ++ CN ++ L +
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ A + +E ++ TY M+ G + EA + E + F P + T
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I +C+ ++ A+ + + K P A + L+
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + T +I L K A+ + + M + G KP+ V Y ++ D
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+LF+EM G+ P + +Y++ I+GLCK+ +VDEA I I P+VV L+
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 126 CEAGDLSKAKGVMKEMGLKGVE 147
C+ G L +A + + M GV+
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVK 808
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 99/218 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G+ P V+ + ++ L K+ + A+ +M I+ +VV + ++ G
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++F M + G+ PDV T+ + + +++EA+ + M K+G +P+ + T
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A C+ + + M + ++ +++ L I +AS +++
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P T++ +IC C ++EA + + + F P
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ + +M++ GI P +V Y+I++ G+ G + +F + + L+PDV Y + I
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPN 114
G CK ++ EA + + M++ G KP+
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 7/234 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK----QDG--IKPDVVCYTIVLSG 54
M ++ P V+ +I L K R +AL + QM+ DG IK D + + ++ G
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 IVAEGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 113
+ G + +EL M L +P+ TYN I+G C+ K++ A ++V M + KP
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
NVVT NT++G +C L+ A +M +GV+ N+ TY ++ + + +A
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
E+ML+ P + + +I +CQ ++A+ +++K+ F+ A+ L+
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +I L + R DA+ ++ ++K+ G D++ Y +++ + +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K+ E+ +M G PD TYN I+ K + ++++ M + G P V T
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ A C G+L +A + K+MGL V N Y I+++ G+A L EEM K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
P T++ + C+ +K L+LM ++V
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF ++ + +I + +L M+++G KPD + Y ++S D+ +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCNTLLG 123
+ + ++M GL P V TY I+ C ++DEA+++ M + PN V N L+
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN 660
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEMLK 178
A + G+ +A + +EM +K V N+ TY + L K + GE L L++EM++
Sbjct: 661 AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ-GETLLKLMDEMVE 715
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSG---IVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
A+Y +M + G PD Y ++SG + + D +++ E E G D+ YN+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG---GFSLDLLAYNM 551
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I C +N ++ +++ M K G KP+ +T NTL+ + D + +M++M G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKKCFYPRSSTFDNIICCMCQKGLINEA 204
++ + TY ++D E+ EA L ++M L P + ++ +I + G +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
L L +++ K P + AL
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALF 694
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 90/181 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ M+++G+K +VV Y ++ + + K +++ML G PD Y I+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLC+ + +AI++V+ + + G +++ N L+G C+ + K ++ +M +G +
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ TY ++ + ++E+M + P +T+ +I C G ++EAL+L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 209 K 209
K
Sbjct: 640 K 640
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + T I L K R A IL+ + ++ + + +LS + D ++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC------KPNVVTC 118
++L +M + + PDV T + IN LCK +VDEA+++ + M K + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTL+ LC+ G L +A+ ++ M L+ + N TY ++DG ++ A ++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ P T + I+ MC+ +N A+
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ F +I L K R +A +L +MK ++ P+ V Y ++ G G E+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M + P+V T N + G+C+ + ++ A+ M K G K NVVT TL+ A C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
++ KA ++M G + Y ++ GL +A ++E++ + F ++
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I C K + E++ + + P + + L+
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + ++ AL +L +KQ+GI PDVV YT +L+ K
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+F M P+V TYN I+ + EA++I M + G KPNVV+ TLL A
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ V+ +G+ LN Y + + AE+ +A L + M KK
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
S TF +I C+ EA+ +K++
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 8/238 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + ++I +AL + +M +G+ PD+V + IVLS +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI--KLGCKPNVVTC 118
Y K F+ M + PD T+N+ I L K + +A+ + +SM + C+P+VVT
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++ G++ + V + M +G++ N+ +Y ++ G A +L ++ +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 179 KCFYPRSSTFD---NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
P ++ N Q G E +M+K K P + AL+ GS+
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSN 438
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
LF EM PD TY+ IN + + A+ ++D M++ P+ T N L+ A
Sbjct: 165 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+G+ +A V K+M GV +L T+ I+L + +A E M P ++
Sbjct: 225 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 284
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAK 214
TF+ II C+ + G ++AL+L + K
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSMREK 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
+C + MIR + A + +M++ KPD Y +++ G +
Sbjct: 139 YCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAM 198
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L D+ML + P TYN IN EA+++ M G P++VT N +L A
Sbjct: 199 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 258
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK---CFY 182
SKA + M V + T+ I++ L + +A L M +K C
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-R 317
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I+ KG I + + +VA+ P ++ AL+
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 100/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ G P V+ +T ++ + + A + M+++ KP+VV Y ++ + G
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+F +M G+ P+V + + + K ++ + G N N+
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+G+ A +L KA + + M K V+ + T+ I++ G ++ EA L+EM
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +++C ++G + EA + ++ P A+ ++L
Sbjct: 561 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 40/235 (17%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS------- 53
MRK P V+ + +I +A+ I QM+QDGIKP+VV +L+
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 54 --------------GI--------VAEGDYVKLDEL------FDEMLVLGLIPDVYTYNV 85
GI A G Y+ EL + M + D T+ +
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+G C+ +K EAI + M L +++L A + G +++A+ + +M + G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
E ++ Y ML + G+A L EM P D+I C +
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP-----DSIACSALMRAF 645
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + ++ AL +L +KQ+GI PDVV YT +L+ K
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+F M P+V TYN I+ + EA++I M + G KPNVV+ TLL A
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ V+ +G+ LN Y + + AE+ +A L + M KK
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 397
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
S TF +I C+ EA+ +K++
Sbjct: 398 SVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 8/238 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + ++I +AL + +M +G+ PD+V + IVLS +
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI--KLGCKPNVVTC 118
Y K F+ M + PD T+N+ I L K + +A+ + +SM + C+P+VVT
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++ G++ + V + M +G++ N+ +Y ++ G A +L ++ +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 179 KCFYPRSSTFD---NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
P ++ N Q G E +M+K K P + AL+ GS+
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSN 306
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
LF EM PD TY+ IN + + A+ ++D M++ P+ T N L+ A
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+G+ +A V K+M GV +L T+ I+L + +A E M P ++
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 152
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAK 214
TF+ II C+ + G ++AL+L + K
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREK 180
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 4/225 (1%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
+C + MIR + A + +M++ KPD Y +++ G +
Sbjct: 7 YCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAM 66
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L D+ML + P TYN IN EA+++ M G P++VT N +L A
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK---CFY 182
SKA + M V + T+ I++ L + +A L M +K C
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-R 185
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I+ KG I + + +VA+ P ++ AL+
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 100/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ G P V+ +T ++ + + A + M+++ KP+VV Y ++ + G
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+F +M G+ P+V + + + K ++ + G N N+
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+G+ A +L KA + + M K V+ + T+ I++ G ++ EA L+EM
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +++C ++G + EA + ++ P A+ ++L
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS------- 53
MRK P V+ + +I +A+ I QM+QDGIKP+VV +L+
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 54 --------------GI--------VAEGDYVKLDEL------FDEMLVLGLIPDVYTYNV 85
GI A G Y+ EL + M + D T+ +
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+G C+ +K EAI + M L +++L A + G +++A+ + +M + G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
E ++ Y ML + G+A L EM P D+I C
Sbjct: 464 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP-----DSIAC 506
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K GF P V + ++ LVK AL + K+DG+ + + I++ G+ G
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ E+ M PDV+ Y I L + +D ++++ D M + KP+V+ T
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G + + + EM K + ++ YR++++G V ++ A L E+++
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ ++ +I +C +++A +L + + + P
Sbjct: 399 YIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 69/288 (23%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC-------------------- 47
P V +T MI+ LV E +L + ++M++D IKPDV+
Sbjct: 296 PDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYEL 355
Query: 48 ---------------YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
Y +++ G VA+G L+++++ G I D+ YN I GLC
Sbjct: 356 FMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL---- 148
N+VD+A ++ I+ +P+ T + ++ A LS V++ +G G +
Sbjct: 416 VNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYL 475
Query: 149 ------------------------------NLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ Y I+++ L +I ++ L EM K
Sbjct: 476 TQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRK 535
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
F P SS++ ICC +KG + A +KI+ S P A+ +L
Sbjct: 536 LGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSL 583
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 13/231 (5%)
Query: 22 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
K +D YIL + K G V Y I++ + GD K LF EM LG PD
Sbjct: 488 KNAMALDVFYIL-KTKGHG---SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSS 543
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
+Y++ I ++ V A + +I++ C P++ +L LC+ G++ +++E
Sbjct: 544 SYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVREC 603
Query: 142 GLKGVELNLHTYRIMLDG-LVGKAEIGEASL-LLEEMLKKCFYPRSSTFDNIICCMCQKG 199
L VE ++ L V K E + +++EM ++ + + II M + G
Sbjct: 604 -LGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Query: 200 LINEALELMKKIVAKSFAPGAR--AWEALLLHS----GSDLTYSETTFAGL 244
I A E+ ++ + A +E +L+ +DL S F GL
Sbjct: 663 TIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGL 713
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 75/192 (39%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
KQ G K D Y + G + D+L + M G P + + I +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+ + M K G KP V N ++ AL + G A V ++ G+ T+ I+
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ GL I E +L+ M + P + +I + +G ++ +L + ++
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 217 APGARAWEALLL 228
P A+ L++
Sbjct: 330 KPDVMAYGTLVV 341
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL++L + + + D V Y +V+ +GD D L EM +GL PDV TY I
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM----GL 143
NG C K+D+A ++ M K C N VT + +L +C++GD+ +A ++ EM G
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI-- 201
+ N TY +++ K + EA L+L+ M + P + + C+ +G++
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP-----NRVTACVLIQGVLEN 322
Query: 202 NEALELMKKIVAK 214
+E ++ + K++ K
Sbjct: 323 DEDVKALSKLIDK 335
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 5/225 (2%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ C + + +IR + A ++ +M G+ PDV+ YT +++G G
Sbjct: 158 EFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKID 217
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG----CKPNVVTC 118
L EM + + TY+ + G+CK ++ A++++ M K PN VT
Sbjct: 218 DAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTY 277
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEML 177
++ A CE + +A V+ MG +G N T +++ G++ E +A S L+++++
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLV 337
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
K S F + + + EA ++ + ++ + P A
Sbjct: 338 KLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLA 382
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK-LDE 66
P + +T +I+ ++ R +AL +L++M G P+ V +++ G++ + VK L +
Sbjct: 272 PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSK 331
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L D+++ LG + ++ L + + +EA +I M+ G +P+ + C+ + LC
Sbjct: 332 LIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELC 391
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHT--YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ +E+ K V+ + + + ++L GL + EA+ L + ML K +
Sbjct: 392 LLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLK 451
Query: 185 SSTFDNII 192
S + II
Sbjct: 452 VSHVEKII 459
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 90 LCKQ-NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LC Q N DEA+ ++ + + V N ++ + GDL+ A ++KEM G+
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY M++G +I +A L +EM K S T+ I+ +C+ G + ALEL+
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 209 KKI 211
++
Sbjct: 259 AEM 261
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ +T ++ L K R AL + ++MK G+K D+ Y ++ G +
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
LF E+L GL P YN I+G + A+ + M+K G + ++ T TL+
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + G+L A + EM G+ + Y ++++GL K + + + EEM K P
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I ++G ++EA L +++ K P ++ L+
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + F+ +I + K AL +M+ G+ P V ++ G +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +LFDE GL +V+ N ++ LCKQ K DEA +++ M G PNVV+ N
Sbjct: 425 HEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C ++ A+ V + KG++ N +TY I++DG + A ++ M
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ II +C+ G ++A EL+ ++
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + +M +DG++ D+ YT ++ G++ +G+ + EL+ EM +GL+PD Y V +N
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GL K+ + + +++ + M K PNV+ N ++ G+L +A + EM KG+
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 149 NLHTYRIMLDGLVGKAEIGEASLL 172
+ T+ I++ G VG + A+ L
Sbjct: 828 DGATFDILVSGQVGNLQPVRAASL 851
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
C M + +I KE A+ +M +GI P+V+ YT +++G+ +
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
E+ DEM G+ D+ Y I+G CK++ ++ A + +++ G P+ N+L+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
G++ A + K+M G+ +L TY ++DGL+ + AS L EM P
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ I+ + +KG + +++ +++ + P + A++
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P V +I+ +K ++ +AL + ++ + G+ VC TI LS + +G
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTI-LSWLCKQGK 458
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL +M G+ P+V +YN + G C+Q +D A + ++++ G KPN T +
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML-KK 179
L+ D A V+ M +E+N Y+ +++GL + +A LL M+ +K
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++II ++G ++ A+ +++ +P + +L+
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 37/263 (14%)
Query: 1 MRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M++ C P +T +I VK+ DA+ + ++M DGI +VV T +++G
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 60 DYVKLDELFD-----------------------------------EMLVLGLIPDVYTYN 84
D V LFD +M VLGL P V+ +
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
I G K K +EA+++ D + G NV CNT+L LC+ G +A ++ +M +
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ N+ +Y ++ G + + A ++ +L+K P + T+ +I + A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
LE++ + + + ++ ++
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTII 555
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Query: 32 ILNQMKQDGI-KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
+L +MK+ + P YT V+ V +G+ L DEML G+ +V I G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
CK N + A+ + D M K G PN VT + L+ + G++ KA K+M + G+ ++
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF--DNIICCMCQKGLINEALELM 208
++ G + + EA L +E + ++ F + I+ +C++G +EA EL+
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGL---ANVFVCNTILSWLCKQGKTDEATELL 466
Query: 209 KKIVAKSFAPGARAWEALLL 228
K+ ++ P ++ ++L
Sbjct: 467 SKMESRGIGPNVVSYNNVML 486
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+ GF F ++ K+ + A+ I+NQM + + P LS +V
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSL 214
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ EL+ M+ +G+ D T + + ++ K EA++++ I+ G +P+ + +
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA 274
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVEL-NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ A C+ DL+ A +++EM K + + + TY ++ V + + +A L +EML
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I C+ + AL L K+ + +P + + L+
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 53/89 (59%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ +G P + +T ++ L K+ + + + + +MK++ + P+V+ Y V++G EG+
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYING 89
+ L DEML G++PD T+++ ++G
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 29 ALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGD-----YVKLD---ELFDEMLVLGLIPD 79
A + N+M + D KPD+ YT++LS ++ + YV L L +M G+IPD
Sbjct: 163 AFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPD 222
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
+ N+ I K +VDEAI++ M G +PN T + L+ +CE G + + G K
Sbjct: 223 TFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYK 282
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
EM +KG+ N Y +++ L + + EA ++ +ML P T++ ++ +C+ G
Sbjct: 283 EMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGG 342
Query: 200 LINEALELMKKIVAKSFAPGARAWEALL 227
+EALE++++ + G R + L+
Sbjct: 343 RGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P +I+ K +A+ + +M G +P+ Y+ ++ G+ +G
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + EM V G++P+ Y V I L + ++DEA+++V M+ P+++T NT
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
+L LC G S+A +++E + + YR ++D
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L K R DA N + + ++PD+V Y ++ G + + + +F+ + V
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
P+ T + I+ LCK N +D AI++ M + G KPN VT L+ ++ D+ +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ +EM KG+ ++ +Y I++DGL + + EA+ + + + P + +I
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 196 CQKGLINEALELMKKIVAKSFAP 218
C+ G + EA L + ++ P
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKP 780
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEE------RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
G P V FT ++R + E+ + L + + M+++ I D+ +V+ +
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ F+ ++ + PD+ TYN I G C ++DEA +I + + PN VT
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L+ LC+ D+ A + M KG + N TY ++D +I + L EEM +
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P ++ II +C++G ++EA + + + P A+ L+
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 91/178 (51%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +Q G+K DVV ++ + V GD ++ ML G+ P+V TY + I GLC
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ ++ EA + ++K G +P++VT ++L+ C+ G+L + ++M G ++
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
Y +++DGL + + A +ML + F+++I C+ +EAL++ +
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ F +I K A + M+Q GI+PD++ Y+ ++ G G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF + L G+ DV ++ I+ K + A + M+ G PNVVT L+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G + +A G+ ++ +G+E ++ TY ++DG + L E+M+K + P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ + ++GL+ A+ K++ +S + +L+
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
+ G + +V VL G+ + V L +L G P+V T+ ING CK+ ++D
Sbjct: 245 ERGFRVGIVSCNKVLKGLSVDQIEVA-SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
A + M + G +P+++ +TL+ +AG L + + KGV+L++ + +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
D V ++ AS++ + ML + P T+ +I +CQ G I EA + +I+ +
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 218 PGARAWEALL 227
P + +L+
Sbjct: 424 PSIVTYSSLI 433
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 82/153 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ +T +I+ L ++ R +A + Q+ + G++P +V Y+ ++ G G+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+++M+ +G PDV Y V ++GL KQ + A++ M+ + NVV N+L+
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
C +A V + MG+ G++ ++ T+ ++
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ F+ I VK A + +M GI P+VV YTI++ G+ +G + ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
++L G+ P + TY+ I+G CK + + + MIK+G P+VV L+ L + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ A +M + + LN+ + ++DG EA + M P +TF
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 190 NII 192
++
Sbjct: 536 TVM 538
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + T +I L K A+ + + M + G KP+ V Y ++ D
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+LF+EM G+ P + +Y++ I+GLCK+ +VDEA I I P+VV L+
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 126 CEAGDLSKAKGVMKEMGLKGVE 147
C+ G L +A + + M GV+
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVK 779
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ + +M++ GI P +V Y+I++ G+ G + +F + + L+PDV Y + I
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPN 114
G CK ++ EA + + M++ G KP+
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 3/232 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG+ V F +I KE + +AL + +M + G+ P+VV + +++ G GD
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 61 YVKLDELFDEMLVLG---LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+L +M ++ + P+ TYN ING CK ++D A +I M+K G N T
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ A AG +A + EM KG+ +N Y ++ L + +I A +L +M
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
K T ++ +C+ G + EA+E ++I K L+ H
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R L + +A+ Q+ + + D+VC+ ++ V + D++ MLV G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
L D ++ I+G K+ K++ A++I D MIK+ N+V N+++ L + G A+
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS--TFDNIIC 193
V+ M +K ++ TY +L+ + + EA +L +M K+ S TF+ +I
Sbjct: 522 AVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+ G +A E++K +V + P + + L+
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLI 611
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V D ++R + A ++ Q + +G V + ++ + +
Sbjct: 145 GSSPDVFD--SLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+++ EM LG + +V T+N+ I CK++K+ EA+ + M+K G PNVV+ N ++
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 125 LCEAGDLSKAKGVMKEMGLKG---VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
C+ GD+ A ++ +MG+ V N TY +++G + A + +M+K
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
T+ ++ + G +EAL L ++ +K
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 84/177 (47%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + ++M G+ + V Y ++ + EGD + +M + D +T + +
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
GLC+ V EA++ + + ++V NTL+ L+ A ++ M ++G+
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
L+ ++ ++DG + + ++ A + + M+K +++I+ + ++G+ A
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ G P ++ + MI K + +A ++ +M + G+ P+ V Y+ +LS V
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+++ +F EM + D+ T N+ I+ + + V EA ++ S+ K+ +PNVV+ NT
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L EA +A + + M K +E N+ TY M+ E +A+ L++EM +
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P + T+ II + G ++ A L +K+
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 2/241 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ P ++ +I KE AL L +M+QD + D+V Y+ ++ D
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y K +F + G+ PD+ YN IN K EA ++ M + G PN V+ +T
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE-IGEASLLLEEMLKK 179
LL E +A V EM L+L T IM+D + G+ + + EA L + K
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID-VYGQLDMVKEADRLFWSLRKM 359
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
P +++ I+ + L EA+ L + + K + ++ G + + +
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 240 T 240
T
Sbjct: 420 T 420
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
M+ L +E +L +L+ + ++ P V Y +VL ++ + LFDEM
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
L PD YTY+ I K+ D A+ + M + ++V + L+ D SKA
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLKKCFYPRSSTFDNIIC 193
+ + G+ +L Y M++ + GKA++ EA LL++EM + P + ++ ++
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMIN-VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 194 CMCQKGLINEALELMKKI 211
+ EAL + ++
Sbjct: 304 VYVENHKFLEALSVFAEM 321
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGD-YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+++ I+P+VV Y +L + E + + + LF M + +V TYN I K
Sbjct: 356 LRKMDIEPNVVSYNTILR-VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
+ ++A +V M G +PN +T +T++ +AG L +A + +++ GVE++ Y+
Sbjct: 415 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ 474
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
M+ +G A LL E+ PR + I + + G EA + ++
Sbjct: 475 TMIVAYERVGLMGHAKRLLHELKLPDNIPRETA----ITILAKAGRTEEATWVFRQ 526
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+RK+ P V+ + ++R + E +A+++ M++ I+ +VV Y ++ +
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K L EM G+ P+ TY+ I+ K K+D A + + G + + V T
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 121 LLGALCEAGDLSKAKGVMKEMGL 143
++ A G + AK ++ E+ L
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKL 498
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 38/257 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +++ K+++ +A ++ +M++ G++PD V Y + + V +G+ V+ +
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 68 FDEMLVLG--LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL---------------- 109
E +V+ P+ T + + G C++ +V + ++ V M ++
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 110 -------------------GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
K +V+T +T++ A AG + KA V KEM GV+ +
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
H Y I+ G V E +A LLE ++ + P F +I C G +++A+ + K
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 211 IVAKSFAPGARAWEALL 227
+ +P + +E L+
Sbjct: 425 MCKFGVSPNIKTFETLM 441
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 5/221 (2%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C V T ++ L++ R +A + + + G +P ++ YT +L+ + + Y +
Sbjct: 42 CRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS 101
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ E+ G D +N IN + +++A+Q + M +LG P T NTL+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 127 EAGDLSKAK---GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
AG ++ +M E G V N+ T+ +++ K ++ EA ++++M + P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 184 RSSTFDNIICCMCQKG-LINEALELMKKIVAKSFA-PGARA 222
+ T++ I C QKG + E+++K+V K A P R
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +T ++ + +++ I+++++Q G K D + + V++ G+
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG---CKPNVVTCNTL 121
+ +M LGL P TYN I G K + + +++D M++ G PN+ T N L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEM-LKK 179
+ A C+ + +A V+K+M GV + TY + V K E A S ++E+M +K+
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P T ++ C++G + + L ++++
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 46/242 (19%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI---PDVYTYN 84
DA+ L +MK+ G+ P Y ++ G G + EL D ML G + P++ T+N
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL----------------------- 121
V + CK+ KV+EA ++V M + G +P+ VT NT+
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 122 --------------LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV---GKA 164
+G C G + ++ M VE NL + +++G V +
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 165 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
I E L++E K T+ ++ G + +A ++ K++V P A A+
Sbjct: 313 GIDEVLTLMKECNVKADV---ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 225 AL 226
L
Sbjct: 370 IL 371
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + +M + G+KPD Y+I+ G V + K +EL E L++ P+V + I+
Sbjct: 349 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLIVESRPNVVIFTTVIS 407
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C +D+A+++ + M K G PN+ T TL+ E KA+ V++ M GV+
Sbjct: 408 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 467
Query: 149 NLHTYRIMLDG 159
T+ ++ +
Sbjct: 468 ENSTFLLLAEA 478
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +IR + A+ QM Q G V + +L+ + ++ K+ +LFDE+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 73 VL--GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
+IPD +Y + I C ++AI+I+ M G + + T+L +L + G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 131 LSKAKGVMKEMGLKGVELNLHTY--RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
L A + EM KG EL+ Y RIM + E L+EEM P + ++
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISY 281
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
+ ++ C++G+++EA ++ + + + AP A + L+ H
Sbjct: 282 NYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFH 322
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 2/171 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
FT ++ L K+ A + N+M + G + D Y + + E ++ EL +EM
Sbjct: 212 FTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMS 270
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+GL PD +YN + C++ +DEA ++ + + C PN T TL+ LC +
Sbjct: 271 SMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYE 330
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+ + K+ + +T + ++ GLV + +A L+ +KK F P
Sbjct: 331 QGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI-RTVKKKFPP 380
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-VLGLIPDVYTYNVY 86
+A + +M K V+ + +LS + ++ELF+E+ L + PD+ +YN
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I LC+++ + EA+ ++D + G KP++VT NTLL + G + + +M K V
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+++ TY L GL +A+ E L E+ P +F+ +I +G ++EA
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEA 306
Query: 207 LMKKIVAKSFAPGARAWEALLL 228
K+IV + P +A ALLL
Sbjct: 307 WYKEIVKHGYRPD-KATFALLL 327
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 39/211 (18%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY-TIVLS-------- 53
KL P ++ + +I+ L +++ +A+ +L++++ G+KPD+V + T++LS
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 54 --------------------------GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
G+ E +L LF E+ GL PDV+++N I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G + K+DEA ++K G +P+ T LL A+C+AGD A + KE K
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+ T + ++D LV ++ EA EE++K
Sbjct: 353 VGQTTLQQLVDELVKGSKREEA----EEIVK 379
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 88/188 (46%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
IKPD+V Y ++ + + + L DE+ GL PD+ T+N + + + +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+I M++ ++ T N L L + + E+ G++ ++ ++ M+ G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
+ + ++ EA +E++K + P +TF ++ MC+ G A+EL K+ +K + G
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 220 ARAWEALL 227
+ L+
Sbjct: 355 QTTLQQLV 362
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDA-LYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+++G P ++ + ++ K R L +L++M+ G+K D + VLS EG
Sbjct: 236 MKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ E F E+ G P TYN + K EA+ ++ M + C + VT N
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ A AG +A GV++ M KGV N TY ++D + EA L M +
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T++ ++ + +K NE ++++ + + +P W +L
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+K G+ P ++ F M+ + A IL +++DG+ PD+V Y ++ V G+
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +E+ + L PD+ +YN I G C++ + EA++++ M + G +P + T NT
Sbjct: 682 CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNT 741
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
+ G ++ + V++ M N T+++++DG + EA
Sbjct: 742 FVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
K+ G KPD+V + +LS Y + + + + + GL PD+ TYN ++ ++ +
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+A +I+ ++ K KP++V+ NT++ C G + +A ++ EM +G+ + TY
Sbjct: 682 CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNT 741
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+ G E ++E M K P TF ++ C+ G +EA++ + KI K+
Sbjct: 742 FVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KT 799
Query: 216 FAP 218
F P
Sbjct: 800 FDP 802
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 3/223 (1%)
Query: 7 CPG-VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
CP + + +++ V+ +A ++ M + G+ P+ + YT V+ G +
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+LF M G +P+ TYN ++ L K+++ +E I+++ M GC PN T NT+L AL
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-AL 465
Query: 126 CEAGDLSK-AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C + K V +EM G E + T+ ++ +AS + EM + F
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 525
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+T++ ++ + +KG ++ + +K F P ++ +L
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+R L +E + A +L+++ DV YT +L G Y K +LF+ M +G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAI-QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
P + TYNV ++ K + I ++D M G K + TC+T+L A G L +A
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLKKCFYPRSSTFDNIIC 193
K E+ G E TY +L + GKA + EA +L+EM + S T++ ++
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQ-VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G EA +++ + K P A + ++
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 99/218 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF V + ++ L ++ +++ MK G KP Y+++L G+
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y+ ++ + + + + P + K + + + K G KP++V N+
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L +A+G+++ + G+ +L TY ++D V + E +A +L+ + K
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P +++ +I C++GL+ EA+ ++ ++ + P
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 2/200 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + +T +I K + +AL + MK+ G P+ Y VLS + +
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI-QIVDSMIKLGCKPNVVTCN 119
++ ++ +M G P+ T+N + LC +D+ + ++ M G +P+ T N
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ A G A + EM G + TY +L+ L K + ++ +M K
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Query: 180 CFYPRSSTFDNIICCMCQKG 199
F P +++ ++ C + G
Sbjct: 556 GFKPTETSYSLMLQCYAKGG 575
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 52/99 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I+ + +A+ +L++M + GI+P + Y +SG A G + +++++
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
+ M P+ T+ + ++G C+ K EA+ V +
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 13/170 (7%)
Query: 39 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
G++PDV Y + ++ + ++L+ EM+ GL+PD TYN I+GLCKQNK+ +
Sbjct: 43 SGLQPDVQTYNM----MIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQ 98
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A ++ S C T NTL+ C+A + + EM +G+ N+ TY ++
Sbjct: 99 ARKVSKS-----CS----TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIH 149
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
G + A + +EM+ Y S TF +I+ +C + + +A+ ++
Sbjct: 150 GFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
D YN+ I+GLCK K DEA I +++ G +P+V T N ++ L +A+ +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
EM +G+ + TY M+ GL + ++ +A ++ K C STF+ +I C+
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQA----RKVSKSC-----STFNTLINGYCKA 119
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
+ + + L ++ + + L+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLI 148
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 4/210 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F ++R L +E+ DA + + +K +PD+ + I+LSG + + E M
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEE---MK 238
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
GL PDV TYN I+ CK ++++A +++D M + P+V+T T++G L G
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
KA+ V+KEM G ++ Y + +G+A L++EM+KK P ++T++
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARA 222
+ + + EL +++ P ++
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQS 388
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P V+ + +I K+ A ++++M+++ PDV+ YT V+ G+ G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ EM G PDV YN I C ++ +A ++VD M+K G PN T N
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 121 LLGALCEAGDLSKA 134
L A DL ++
Sbjct: 357 FFRVLSLANDLGRS 370
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
MK G+KPDVV Y ++ + + K +L D+M PDV TY I GL +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
D+A +++ M + GC P+V N + C A L A ++ EM KG+ N TY +
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
L ++G + L ML P + + +I + ++ A+ L + +V K
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 216 F 216
F
Sbjct: 417 F 417
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
D C+ +L + E ++ L PD+ T+N+ ++G +EA
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
+ M G KP+VVT N+L+ C+ ++ KA ++ +M + ++ TY ++ GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 164 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
+ +A +L+EM + YP + ++ I C + +A +L+ ++V K +P A +
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + +I + +A+ + NQM++ G +PD V Y ++ I A+
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLID-IHAKAG 443
Query: 61 YVKLD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
++ + +++ M GL PD +TY+V IN L K + A ++ M+ GC PN+VT N
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ +A + A + ++M G + + TY I+++ L + EA + EM +K
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P + ++ + G +++A + + ++ P +LL
Sbjct: 564 NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ F MI K AL + M+ G +PD V Y+IV+ + G +
Sbjct: 494 GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ +F EM +PD Y + ++ K VD+A Q +M++ G +PNV TCN+LL
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLST 613
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
+S+A +++ M G+ +L TY ++L
Sbjct: 614 FLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
+Q G K D YT ++ + + ++++L DEM+ G P+ TYN I+ + N +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
EA+ + + M + GC+P+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++ L + A L EM+ + P TF+ +I + AL+L + + F
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 217 AP 218
P
Sbjct: 531 QP 532
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + +M++ G+ PD Y+++++ + G LF EM+ G P++ T+N+ I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
K + A+++ M G +P+ VT + ++ L G L +A+GV EM K
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 149 NLHTYRIMLDGLVGKA-EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ Y +++D L GKA + +A + ML+ P T ++++ + ++EA L
Sbjct: 568 DEPVYGLLVD-LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Query: 208 MKKIVAKSFAPGARAWEALL 227
++ ++A P + + LL
Sbjct: 627 LQSMLALGLHPSLQTYTLLL 646
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
R+ GF +T M+ L + ++ + +L++M +DG KP+ V Y ++ +Y
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY-GRANY 409
Query: 62 VKLD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+K +F++M G PD TY I+ K +D A+ + M + G P+ T +
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSV 469
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEMLKK 179
++ L +AG L A + EM +G NL T+ IM+ L KA E +L L +M
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARNYETALKLYRDMQNA 528
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
F P T+ ++ + G + EA + ++ K++ P
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ T ++ +++E R +++ +L ++ + D + Y+IV+ EGD V ++
Sbjct: 267 PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKV 326
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FDEML G + + Y V++ C++ V EA +++ M + G P T N L+G
Sbjct: 327 FDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G K + M +G+ + + M+ + + A+ +L + + K F P T
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ ++I + I++AL+L ++ + +PG + +L++
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 96/220 (43%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + MI+ L KE R + + +L+++ P V+ T ++ ++ E + L
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+L+ ++ D Y++ + K+ + A ++ D M++ G N + CE
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD+ +A+ ++ EM GV T+ ++ G + E M+ + P S
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSA 411
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+ ++ + + +N A E++ K + K F P + L+
Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLI 451
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 50 IVLSGIVAEGDYVKLDEL----FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 105
I L+ ++ K+D+L ++ + + P+ T + I LCK+ ++ E + ++D
Sbjct: 200 ITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDR 259
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
+ C P+V+ +L+ + E + ++ ++K + +K + ++ Y I++ + +
Sbjct: 260 ICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGD 319
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
+ A + +EML++ F S + + C+KG + EA L+ ++ +P +
Sbjct: 320 LVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNC 379
Query: 226 LL 227
L+
Sbjct: 380 LI 381
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P F +M++ + K E A IL + G PD Y+ ++ G + D +
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF EM + P + I GLC KV+ + + M K +PN + L+ A
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 125 LCEAGDLSKAKGVMKEM 141
+ GD + A V EM
Sbjct: 524 FQKIGDKTNADRVYNEM 540
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +T MI + A + MK+ +KPDVV Y+++L+ E D + E
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSD-PELDMKREMEA 691
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD +IPDV Y + IN C N + + + M + P+VVT LL E
Sbjct: 692 FD------VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE 745
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ + +EM V+ ++ Y +++D ++GEA + ++M++ P ++
Sbjct: 746 -------RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAP 798
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C C+ G + EA + +++ P + AL+
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ P V+ +T +++ K ER + +MK +KPDV YT+++ GD
Sbjct: 724 MKRREIVPDVVTYTVLLK--NKPERNLS-----REMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +FD+M+ G+ PD Y I CK + EA I D MI+ G KP+VV
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVE 147
L+ C G + KA ++KEM KG++
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 34 NQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 93
+M+ + PDVV YTI+++ D K+ LF +M ++PDV TY V + ++
Sbjct: 687 REMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPER 746
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
N E M KP+V L+ C+ GDL +AK + +M GV+ + Y
Sbjct: 747 NLSRE-------MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPY 799
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
++ + EA ++ + M++ P + +I C+ G + +A++L+K+++
Sbjct: 800 TALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLE 859
Query: 214 KSFAPGARAWEAL 226
K P + A+
Sbjct: 860 KGIKPTKASLSAV 872
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + + ++ I D VCY + + G + ELF EM G+ PDV Y I
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G C Q K +A ++ M G P++V N L G L G +A +K M +GV+
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
T+ ++++GL+ E+ +A E + K +S ++ C G ++ A E
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLDHAFE 553
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 7/191 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P V+ +T MI + MK+ I PDVV YT++L
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN- 747
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L EM + PDV+ Y V I+ CK + EA +I D MI+ G P+
Sbjct: 748 ------LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 801
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G L +AK + M GV+ ++ Y ++ G + +A L++EML+K
Sbjct: 802 LIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Query: 181 FYPRSSTFDNI 191
P ++ +
Sbjct: 862 IKPTKASLSAV 872
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 29 ALYILNQMKQDGI---KPDV-VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
A ++L ++ I K D+ + Y V+ G+ E + + +M G+ PDVY Y+
Sbjct: 271 AYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYS 330
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
I G K + +A+ + + M+K + N V +++L C+ G+ S+A + KE
Sbjct: 331 AIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRET 390
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
+ L+ Y + D L ++ EA L EM K P + +I C +G ++A
Sbjct: 391 NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA 450
Query: 205 LELM 208
+LM
Sbjct: 451 FDLM 454
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V ++ +I K A+ + N+M + + + V + +L G+
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +LF E + D YNV + L K KV+EAI++ M G P+V+ T
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G C G S A +M EM G ++ Y ++ GL EA L+ M +
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
P T + +I + G +++A + + KS
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 29/192 (15%)
Query: 26 GMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK---------------------- 63
+A L M+ G+KP V + +V+ G++ G+ K
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKG 541
Query: 64 ------LDELFDEMLVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
LD F+ + L +P + ++ + +++ + +A ++D M KLG +P
Sbjct: 542 FCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKS 601
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+GA C ++ KA+ + + K + +L TY IM++ E +A L E+M
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 177 LKKCFYPRSSTF 188
++ P T+
Sbjct: 662 KRRDVKPDVVTY 673
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ P V +T +I + K +A I +QM + G+ PD YT +++ G
Sbjct: 752 MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGY 811
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +FD M+ G+ PDV Y I G C+ V +A+++V M++ G KP + +
Sbjct: 812 LKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA 871
Query: 121 LLGALCEAGDL 131
+ A +A L
Sbjct: 872 VHYAKLKAKGL 882
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 5/221 (2%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C V T ++ L++ R +A + + + G +P ++ YT +L+ + + Y +
Sbjct: 42 CRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS 101
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ E+ G D +N IN + +++A+Q + M +LG P T NTL+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 127 EAGDLSKAK---GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
AG ++ +M E G V N+ T+ +++ K ++ EA ++++M + P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 184 RSSTFDNIICCMCQKG-LINEALELMKKIVAKSFA-PGARA 222
+ T++ I C QKG + E+++K+V K A P R
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 118/282 (41%), Gaps = 63/282 (22%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +++ K+++ +A ++ +M++ G++PD V Y + + V +G+ V+ +
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 68 FDEMLVL---------------------GLIPD----------------VYTYNVYINGL 90
E +V+ G + D + +N ING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 91 CK---QNKVDEA----------------------IQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ ++ +DE +Q++ M + K +V+T +T++ A
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
AG + KA V KEM GV+ + H Y I+ G V E +A LLE ++ + P
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNV 424
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +I C G +++A+ + K+ +P + +E L+
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +T ++ + +++ I+++++Q G K D + + V++ G+
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG---CKPNVVTCNTL 121
+ +M LGL P TYN I G K + + +++D M++ G PN+ T N L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEM-LKK 179
+ A C+ + +A V+K+M GV + TY + V K E A S ++E+M +K+
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P T ++ C++G + + L ++++
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + +M + G+KPD Y+I+ G V + K +EL E L++ P+V + I+
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLIVESRPNVVIFTTVIS 432
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C +D+A+++ + M K G PN+ T TL+ E KA+ V++ M GV+
Sbjct: 433 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 492
Query: 149 NLHTYRIMLDG 159
T+ ++ +
Sbjct: 493 ENSTFLLLAEA 503
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 65/264 (24%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI---PDVYTYN 84
DA+ L +MK+ G+ P Y ++ G G + EL D ML G + P++ T+N
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL----------------------- 121
V + CK+ KV+EA ++V M + G +P+ VT NT+
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 122 --------------LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV---GKA 164
+G C G + ++ M VE NL + +++G V +
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 165 EIGEASLLL------EE---------------MLKKCFYPRSS-TFDNIICCMCQKGLIN 202
I E +L L EE ++K+C T+ ++ G +
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYME 372
Query: 203 EALELMKKIVAKSFAPGARAWEAL 226
+A ++ K++V P A A+ L
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSIL 396
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P + +T ++ +E A I Q+++DG++PDV Y ++ G
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F M +G PD +YN+ ++ + +A + + M +LG P + +
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLLLEEMLKK 179
LL A +A D++K + ++KEM GVE + ML+ L G+ + + +L EM
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN-LYGRLGQFTKMEKILAEMENG 490
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
ST++ +I + G + EL ++ K+F P W +
Sbjct: 491 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + MI K + + + +M+ KP++ YT +++ EG K +E+
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+++ GL PDVY YN + + A +I M +GC+P+ + N ++ A
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG S A+ V +EM G+ + ++ ++L ++ + +++EM + P +
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
++++ + G + M+KI+A+
Sbjct: 464 LNSMLNLYGRLGQFTK----MEKILAE 486
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 6/197 (3%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+++ +PDV+C+ +++ + Y + + L+ ++L +P TY + I C
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNT----LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
++ A ++ M P + + G + G+ +A V + M +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 152 TYRIMLDGLVGKAEIGEASLLLE-EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
TY +M++ L GKA S L EM P T+ ++ ++GL +A E+ ++
Sbjct: 288 TYNLMIN-LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 211 IVAKSFAPGARAWEALL 227
+ P + AL+
Sbjct: 347 LQEDGLEPDVYVYNALM 363
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 79/178 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++LG P + ++ K I+ +M ++G++PD +L+ G
Sbjct: 417 MKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 476
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K++++ EM D+ TYN+ IN K ++ ++ + + +P+VVT +
Sbjct: 477 FTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+GA K V +EM G + T +++L + ++ + + +L M K
Sbjct: 537 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 22 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
K + +DA L K G+K D + ++ +V E E+F + L + PD
Sbjct: 218 KYNKAVDAF--LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK-LFDTIKPDAR 274
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+N+ I+G CK K D+A ++D M P+VVT + + A C+ GD + +++EM
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G N+ TY I++ L ++ EA + E+M + P + + ++I + + G
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 202 NEALELMKKIVAKSFAPGARAWEALL---LHSGSD 233
+A E+ + + + + ++ LH D
Sbjct: 395 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD 429
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I K + DA +++ MK PDVV YT + EGD+ +++E+
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+EM G P+V TY + ++ L K +V EA+ + + M + GC P+ ++L+ L +
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
G A + ++M +GV ++ Y M+ + + A LL+ M
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V+ +T ++ L K ++ +AL + +MK+DG PD Y+ ++ + G
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL---GCKPNVVT 117
+ E+F++M G+ DV YN I+ ++ + A++++ M C PNV T
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
LL C + ++ M V +++ TY +++ GL ++ EA L EE +
Sbjct: 454 YAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAV 513
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+K PR ST ++ + +K + L++ + +K+
Sbjct: 514 RKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKT 551
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 12/213 (5%)
Query: 27 MDALYILNQMKQ---------DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI 77
MDAL N ++ D IKPD + I++ G + + D M V
Sbjct: 246 MDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFT 305
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
PDV TY ++ CK+ ++++ M + GC PNVVT ++ +L ++ +++A GV
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
++M G + Y ++ L +A+ + E+M + ++ +I
Sbjct: 366 YEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALH 425
Query: 198 KGLINEALELMKKI---VAKSFAPGARAWEALL 227
AL L+K++ +S +P + LL
Sbjct: 426 HSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 3/221 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ F P V+ +T + KE +L +M+++G P+VV YTIV+ +
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++++M G +PD Y+ I+ L K + +A +I + M G + +V+ NT
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVEL---NLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++ A A ++K M + E N+ TY +L K ++ +LL M+
Sbjct: 419 MISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMV 478
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
K ST+ +I +C G + EA ++ V K P
Sbjct: 479 KNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P + +T ++ +E A I Q+++DG++PDV Y ++ G
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F M +G PD +YN+ ++ + +A + + M +LG P + +
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLLLEEMLKK 179
LL A +A D++K + ++KEM GVE + ML+ L G+ + + +L EM
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN-LYGRLGQFTKMEKILAEMENG 468
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
ST++ +I + G + EL ++ K+F P W + +
Sbjct: 469 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 516
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + MI K + + + +M+ KP++ YT +++ EG K +E+
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+++ GL PDVY YN + + A +I M +GC+P+ + N ++ A
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG S A+ V +EM G+ + ++ ++L ++ + +++EM + P +
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
++++ + G + M+KI+A+
Sbjct: 442 LNSMLNLYGRLGQFTK----MEKILAE 464
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 6/197 (3%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+++ +PDV+C+ +++ + Y + + L+ ++L +P TY + I C
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNT----LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
++ A ++ M P + + G + G+ +A V + M +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 152 TYRIMLDGLVGKAEIGEASLLLE-EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
TY +M++ L GKA S L EM P T+ ++ ++GL +A E+ ++
Sbjct: 266 TYNLMIN-LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 211 IVAKSFAPGARAWEALL 227
+ P + AL+
Sbjct: 325 LQEDGLEPDVYVYNALM 341
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 79/178 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++LG P + ++ K I+ +M ++G++PD +L+ G
Sbjct: 395 MKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 454
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K++++ EM D+ TYN+ IN K ++ ++ + + +P+VVT +
Sbjct: 455 FTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 514
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+GA K V +EM G + T +++L + ++ + + +L M K
Sbjct: 515 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 17 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV-LG 75
+R L + R +A ++ ++ + PD Y +L + D + E DEM
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ PD+ ++ + I+ +C + EA+ +V + G KP+ NT++ C S+A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
GV K+M +GVE + TY ++ GL + EA + L+ M+ + P ++T+ +++ M
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 196 CQKG 199
C+KG
Sbjct: 346 CRKG 349
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ FT +I + + +A+Y+++++ G KPD Y ++ G + +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +M G+ PD TYN I GL K +V+EA + +M+ G +P+ T +L+ +C
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 128 AG 129
G
Sbjct: 348 KG 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +++ +G +A+ + +MK++G++PD + Y ++ G+ G +
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQ 93
M+ G PD TY +NG+C++
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 17 IRFLVKEERGMDALYILNQMKQDGIKP-DVVCYTIVLSG---IVAEGDYVKLDELFDEML 72
+R K DA + N + P D+ + VL I D VKL F +L
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKL---FQHIL 112
Query: 73 --VLGLIPDVYTYNVYINGLCK--QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
P T+ + ++ C+ + + ++++ M+ G +P+ VT + + +LCE
Sbjct: 113 KSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 172
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FYPRSST 187
G + +AK +MKE+ K + +TY +L L ++ ++EM P +
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
F +I +C + EA+ L+ K+ F P
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +M Q G+ + V YT ++ G+ GD E+F EM+ G+ PD+ TYN+ ++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 92 KQNKVDEAI---QIVD------SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
K K+++A+ ++ D S+ G KPNVVT T++ C+ G +A + ++M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
G + TY ++ + + ++ L++EM F +ST+ ++ M G ++
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLD 181
Query: 203 EAL 205
+
Sbjct: 182 KGF 184
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
ELF EM GL+ + TY I GL + D A +I M+ G P+++T N LL L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 126 CEAGDLSKAKGVMK---------EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
C+ G L KA K + LKGV+ N+ TY M+ G K EA L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL--LLHSG 231
+ P S T++ +I + G + EL+K++ + FA A + + +LH G
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G + +T +I+ L + A I +M DG+ PD++ Y I+L G+ G
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 61 YVKL---------DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 111
K +LF + + G+ P+V TY I+G CK+ +EA + M + G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 112 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
P+ T NTL+ A GD + + ++KEM + TY ++ D
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+++ M + G N VT TL+ L +AGD A+ + KEM GV ++ TY I+LDG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 160 L-----------VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
L GK E G L + K P T+ +I C+KG EA L
Sbjct: 61 LCKNGKLEKALVAGKVEDGWD--LFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 209 KKIVAKSFAPGARAWEALL 227
+K+ P + + L+
Sbjct: 119 RKMKEDGPLPDSGTYNTLI 137
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M +DG++ D + Y+ +++ Y K E F+ M GL+PD TY+ ++ K
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
KV+E + + + + G KP+ + + L EAGD + V++EM V+ N+ Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+L+ + + G A L EML+ P T ++ + +AL+L +++ AK
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 215 SF 216
+
Sbjct: 391 KW 392
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ +M + G+ PD V Y+ +L G ++ L++ + G PD ++V
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+ D ++ M + KPNVV NTLL A+ AG A+ + EM G+
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK-GLINEALEL 207
N T ++ + GKA +L L E +K +P N + MC GL EA L
Sbjct: 360 NEKTLTALVK-IYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 208 M 208
Sbjct: 419 F 419
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 9/217 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + ++ ++ K + + L + + G KPD + ++++ GD
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y + + EM + + P+V YN + + + K A + + M++ G PN T
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG---EASLLLEEML 177
L+ +A A + +EM K ++ Y +L+ A+IG EA L +M
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMC---ADIGLEEEAERLFNDMK 423
Query: 178 K--KCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ +C P + ++ ++ G +A+EL ++++
Sbjct: 424 ESVQC-RPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 28 DALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
+A + N MK+ +PD YT +L+ + G K ELF+EML G+ +V
Sbjct: 414 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 473
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG--ALCEAGD 130
+ L K ++D+ + + D IK G KP+ C LL ALCE+ +
Sbjct: 474 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSE 519
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++ V+ ++ A ++L Q+KQ G KP V Y +++ ++A Y + E
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M IP+ Y V +N L K+ K DEA+ V+ M G + L LC
Sbjct: 651 FRKMQKSS-IPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AG ++ ++K++ + + TY ++ V I A+ + ++M K C P T
Sbjct: 710 AGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVC-SPNLVT 768
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
+ ++ Q GL EA EL +K+
Sbjct: 769 CNIMLKAYLQGGLFEEARELFQKM 792
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCY-----TIVLSGIVAEGDYV---- 62
+T + L K R ++AL + + M Q PD+V Y T+ +G + E YV
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 63 ------KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K E L PDV YN +N ++ + + A ++ + + G KP+ V
Sbjct: 570 RSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPV 629
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T ++ + + ++M + N YR++++ L + + EA +E+M
Sbjct: 630 TYGLIMEVMLACEKYNLVHEFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHTVEDM 688
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ + ++ C+C G NE L ++KKI + P + L+
Sbjct: 689 ESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLI 739
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + ++ L KE + +A++ + M+ GI Y + + + G + +
Sbjct: 660 PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNM 719
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++ + P V TY I + A I D M K+ C PN+VTCN +L A +
Sbjct: 720 LKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQ 778
Query: 128 AGDLSKAKGVMKEMGLKGVEL------------NLHTYRIMLDGLVGKAEIGEASLLLEE 175
G +A+ + ++M G + + +T+ MLD + + + E
Sbjct: 779 GGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYRE 838
Query: 176 MLKKCFY 182
ML+ ++
Sbjct: 839 MLRHGYH 845
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 6 FCPGVMDFTDMIRFLV-KEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
F P + D + ++R+L +D ++ + + + G Y + + + G + +
Sbjct: 329 FKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDE 388
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+E+ M G PD TY+ + GLCK +++EA ++D M GC P++ T L+
Sbjct: 389 AEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQ 448
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-FY 182
C+ +L KA M KG +++ + +++DG V + AS+ L EM+K
Sbjct: 449 GHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVK 508
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P ST+ +I + + EAL+L++ + +++ A A++ L G+
Sbjct: 509 PWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGT 558
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G+ P + ++ ++ L K +R +A +L+QM+ G PD+ +TI++ G +
Sbjct: 396 MRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNE 455
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCN 119
K F ML G D +V I+G NK + A + M+K KP T
Sbjct: 456 LDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYK 515
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ L + +A +++ M + N Y DG + K E + ++L
Sbjct: 516 LLIDKLLKIKKSEEALDLLQMMKKQ----NYPAYAEAFDGYLAKFGTLEDAKKFLDVLSS 571
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELM 208
P + + ++I ++G + +A L+
Sbjct: 572 KDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + + +I L + DAL + +++K G +PD Y I++ G
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
++ EM G +PD YN ++G K KV EA Q+ + M++ G + + T N L+ L
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
G + ++ KG ++ T+ I+ L + ++ A L+EEM + F
Sbjct: 405 FRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDL 464
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
T +++ ++G + +LMK I + P W A
Sbjct: 465 VTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 29 ALYILNQMKQ------DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYT 82
AL + +MK+ PD+ Y ++ + G ++DE+ V G PD T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
Y + I G CK ++D+A++I M G P+ + N LL +A +++A + ++M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 143 LKGVELNLHTYRIMLDGLV--GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
+GV + TY I++DGL G+AE G L ++ KK + + TF + +C++G
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFT--LFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 201 INEALELMKKIVAKSFA 217
+ A++L++++ + F+
Sbjct: 445 LEGAVKLVEEMETRGFS 461
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 9 GVMDFTD-----MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
GV D T M+ VK+ A +L+QM ++ D+ Y +++ G+ G
Sbjct: 624 GVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADL 683
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ D + G D+ YN IN L K ++DEA Q+ D M G P+VV+ NT++
Sbjct: 684 ASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL---VGKAEIGEASLL 172
+AG L +A +K M G N H +LD L + KA +AS +
Sbjct: 744 VNSKAGKLKEAYKYLKAMLDAGCLPN-HVTDTILDYLGKEMEKARFKKASFV 794
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +I+ K R DA+ I +M+ +G PD + Y +L G + +
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF++M+ G+ +TYN+ I+GL + + + + + K G + +T + +
Sbjct: 379 CQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ 438
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
LC G L A +++EM +G ++L T +L G
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%)
Query: 48 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
Y ++S V +G + + D+M D+ TYNV I GL K + D A ++D +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
K G ++V NTL+ AL +A L +A + M G+ ++ +Y M++ ++
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 168 EASLLLEEMLKKCFYPRSST 187
EA L+ ML P T
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT 772
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 5/172 (2%)
Query: 44 DVVCYTIVLSGIVAEGDYV---KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
DV LS +++GD KL E+F+ M V L YTYN ++ K+ A
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTS--YTYNSMMSSFVKKGYFQTAR 650
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++D M + C ++ T N ++ L + G A V+ + +G L++ Y +++ L
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINAL 710
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ EA+ L + M P +++ +I + G + EA + +K ++
Sbjct: 711 GKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAML 762
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + +M G+K DVV Y+ ++S G K+ +LFD M + PD YN +
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 88 NGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+ L K + V EA ++ +M + G +PNVVT N+L+ LC+A +AK V EM KG+
Sbjct: 345 HALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL 404
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ TY + L E+ E LL +M K P T+ +I +C+ + L
Sbjct: 405 FPTIRTYHAFMRILRTGEEVFE---LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLL 461
Query: 207 LMKKIVAKSFAP 218
L ++ K+ P
Sbjct: 462 LWDEMKEKTVGP 473
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEG 59
M+K P + ++ L K +A ++ M+++ GI+P+VV Y ++ +
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ++FDEML GL P + TY+ ++ L +E +++ M K+GC+P V T
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYI 444
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ LC D + EM K V +L +Y +M+ GL +I EA +EM K
Sbjct: 445 MLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Query: 180 CFYPRSSTFDNI 191
P + D I
Sbjct: 505 GMRPNENVEDMI 516
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G V+ ++ MI K L + ++MK++ I+PD Y V+ +
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 61 YVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ L M G+ P+V TYN I LCK K +EA Q+ D M++ G P + T +
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ L ++ + M++M G E + TY +++ L + LL +EM +K
Sbjct: 413 AFMRILRTGEEVFELLAKMRKM---GCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK 469
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
P S++ +I + G I EA K++ K P
Sbjct: 470 TVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I+ L K + +A + ++M + G+ P + Y + I+ G+ V
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGEEVF- 425
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
EL +M +G P V TY + I LC+ D + + D M + P++ + ++
Sbjct: 426 -ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 484
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
L G + +A G KEM KG+ N + ++ GK
Sbjct: 485 LFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGK 523
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I +M + +K D+ Y L G+ E ++ LFD++ L PDV+T+ I G
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ K+DEAI + K GC+P N+LL A+C+AGDL A + KE+ K + ++
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 152 TYRIMLDGLVGKAEIGEASLLLE 174
+ ++D LV ++ EA ++E
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVE 376
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
I+PDV Y ++ G+ +G + + L DE+ GL PD T+N+ ++ + K +E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIML 157
QI M++ K ++ + N L L + + + LKG EL ++ T+ M+
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDK--LKGNELKPDVFTFTAMI 289
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
G V + ++ EA +E+ K P F++++ +C+ G + A EL K+I AK
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML-VLGLIPDVYTYNVY 86
+A + ++M + K + + +L+ V + ++ +F E+ L + PDV +YN
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I GLC + EA+ ++D + G KP+ +T N LL G + + + M K V
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ ++ +Y L GL + + E L +++ P TF +I +G ++EA+
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAIT 303
Query: 207 LMKKI 211
K+I
Sbjct: 304 WYKEI 308
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 20 LVKEERGMDALYILNQMKQ----DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE----- 70
LV +ER D +I + K+ + + ++ Y + + A + ++E+ +E
Sbjct: 44 LVNDER--DPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYP 101
Query: 71 -MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M G + + IN + + A ++ D M + CK ++ N LL A +
Sbjct: 102 NMSKEGFVARI------INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSK 155
Query: 130 DLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+G+ KE+ G +E ++ +Y ++ GL GK EA L++E+ K P TF
Sbjct: 156 KFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITF 215
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ ++ KG E ++ ++V K+ R++ A LL
Sbjct: 216 NILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLL 255
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + MIR L + + I+ +M++ IKP + +++ G E + ++
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ M G+ V TYN+ I LCK+ K EA ++D ++ +PN VT + L+
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C +L +A + + M G + + Y ++ L + A +L E ++K + P
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
S ++ + + ++EA EL+ +V + F W
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELI-AVVKEKFTRNVDLW 394
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
+ K+ + + +Y L K GI+PD+ Y ++ + G + EM + P
Sbjct: 158 MAKDYKEANRVY-LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPT 216
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
++ + I+G K+ K DE +++ M + G V T N ++ LC+ ++AK ++
Sbjct: 217 AASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALID 276
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
+ + N TY +++ G + + EA L E M+ + P S + +I C+C+ G
Sbjct: 277 GVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGG 336
Query: 200 LINEALELMKKIVAKSFAPG 219
AL L ++ + K++ P
Sbjct: 337 DFETALILCRESMEKNWVPS 356
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL-GLIPDVYTYNVYI 87
++ ++Q I V +L + DY + + ++ EM + G+ PD+ TYN I
Sbjct: 130 SIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
LC+ + IV M + KP + ++ + + + VM+ M GV
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVH 249
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ + TY IM+ L + + EA L++ ++ P S T+ +I C + ++EA+ L
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ +V + P + + L+
Sbjct: 310 FEVMVCNGYKPDSECYFTLI 329
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G GV + MI+ L K ++ +A +++ + ++P+ V Y++++ G +E +
Sbjct: 243 MDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEEN 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF+ M+ G PD Y I+ LCK + A+ + ++ P+
Sbjct: 303 LDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKW 362
Query: 121 LLGALCEAGDLSKAK---GVMKEMGLKGVEL 148
L+ L + +AK V+KE + V+L
Sbjct: 363 LVNGLASRSKVDEAKELIAVVKEKFTRNVDL 393
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 10/243 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P + ++ +I L + R D++ I + +K G PD Y ++ ++ D
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + + ML P++ TY+ ++GL K KV +A++I + M+ G P +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL---EEML 177
L LC G A + ++ G ++ Y+++L L + G+ +LL +EM
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL---SRFGKCGMLLNVWDEMQ 457
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG----ARAWEALLLHSGSD 233
+ + ++ I+ +C G + A+ +M++ + K F P +R L+ + ++
Sbjct: 458 ESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
Query: 234 LTY 236
L Y
Sbjct: 518 LAY 520
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Query: 12 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
F ++R L + A + N K+ I D Y I++SG G+ +++++ EM
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEM 281
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
+ G PD +Y+ I GL + +++++++I D++ G P+ N ++ A D
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDF 341
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
++ + M + E NL TY ++ GL+ ++ +A + EEML + P + +
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 192 ICCMCQKGLINEALELMKK 210
+ +C G + A+ + +K
Sbjct: 402 LKPLCSYGPPHAAMVIYQK 420
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%), Gaps = 3/205 (1%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+++ G+ DV Y+++L + + + ++ M+ G+ PD+ + ++ + +
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYR 154
V AI++ + G K + + N LL LCE +S AK V KG + + +Y
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYN 259
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
IM+ G E+ E +L+EM++ F P ++ ++I + + G IN+++E+ I K
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 215 SFAPGARAWEALLLHSGSDLTYSET 239
P A + A++ + S + E+
Sbjct: 320 GNVPDANVYNAMICNFISARDFDES 344
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+R+ G V ++ ++R L + + + +L M +G+ PD+ C TI + V
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP-NVVTCN 119
+ ELF+E G+ ++N + LC+++ V A + ++ K G P + + N
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYN 259
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ + G++ + + V+KEM G + +Y +++GL I ++ + + + K
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ ++ +IC +E++ ++++ + P + L+
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCY-------TIVLSGIVAEGDYVKLDELF 68
+I + K ++ AL I + +G +P+ + Y I+LS G + L
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 446
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
++M GL P +N + K ++ AIQI +M+ G KP V++ LL AL +
Sbjct: 447 NKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKG 506
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+A V M G+E NL+ Y M L G+ + LL+EM K P TF
Sbjct: 507 KLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTF 566
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I + GL A E ++ +++ P +E L+
Sbjct: 567 NAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLI 605
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+LN+M+ G+KP + VL + ++F M+ G P V +Y ++ L
Sbjct: 445 LLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALE 504
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K DEA ++ + MIK+G +PN+ T+ L + ++KEM KG+E ++
Sbjct: 505 KGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVV 564
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
T+ ++ G G A M + P T++ +I + A EL K
Sbjct: 565 TFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKA 624
Query: 212 VAKSFAPGARAWEALL 227
+ ++ ++A++
Sbjct: 625 QNEGLKLSSKPYDAVV 640
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + ++ K A+ I M +G KP V+ Y +LS +
Sbjct: 449 MEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y + +++ M+ +G+ P++Y Y + L Q K + ++ M G +P+VVT N
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
++ G A M + VE N TY ++++ L A+
Sbjct: 569 VISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAK 613
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + ++ L K + +A + N M + GI+P++ YT + S + + + L
Sbjct: 488 GEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLL 547
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D L EM G+ P V T+N I+G + A + M +PN +T L+ A
Sbjct: 548 DTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 171
L A + + +G++L+ Y D +V AE A++
Sbjct: 608 LANDAKPRLAYELHVKAQNEGLKLSSKPY----DAVVKSAETYGATI 650
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 29 ALYILNQMKQ-DGIKPDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVY 86
A+ N +KQ DG V Y +LS I E + + DEL EM G D+ T+ +
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLS-IAGEARNLDMVDELVSEMEKNGCDKDIRTWTIL 230
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I+ K K+ + + + + M K G + + N ++ +LC AG A KEM KG+
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
L TY+++LD + ++ + ++M++ C F ++ C G I EALE
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALE 350
Query: 207 LMKKIVAKSFAPGARAWEALL 227
L++++ K A+ +E L+
Sbjct: 351 LIRELKNKEMCLDAKYFEILV 371
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+++G PGV +T +I + KE++ L +M+ + +P VV YT ++ G ++ G
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F M G PD TY+ +IN LC+ K ++A++++ M+ G P+ + T
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 121 LLGALCEAG--DLSK 133
+ L G DL++
Sbjct: 1000 VFYGLNREGKHDLAR 1014
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 7/223 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P D + L + DA L+ + + G P V Y+I + + G
Sbjct: 776 MIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIG- 833
Query: 61 YVKLDELFDEMLVL---GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
KL+E E+ + D YTY ++GL ++ + +A+ V+SM ++G KP V
Sbjct: 834 --KLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHV 891
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+L+ + L K ++M + E ++ TY M+ G + ++ EA M
Sbjct: 892 YTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ P T+ I C+CQ +AL+L+ +++ K AP
Sbjct: 952 ERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPST 994
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F +++ L + R +DAL I++ MK+ + D Y I++SG + + D K E F+ +
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIK 425
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G P V TY + L K + ++ + + MI+ G +P+ V ++ ++
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A V M KG++ +Y I + L + E + +M R F +I
Sbjct: 486 EAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
Query: 193 CCMCQKGLINEALELMKKIVAKS 215
M + G E + L+K+I +S
Sbjct: 546 SSMEKNGE-KEKIHLIKEIQKRS 567
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 61/106 (57%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++K G P V +T++++ L K ++ + N+M ++GI+PD V T V++G + +
Sbjct: 424 IKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNR 483
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
+ ++F M G+ P +Y++++ LC+ ++ DE I+I + M
Sbjct: 484 VAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+GF P + ++ IR L + + +AL L + + D Y ++ G++ GD
Sbjct: 813 KIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K + + M +G P V+ Y I K+ ++++ ++ M C+P+VVT ++
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
G + +A + M +G + TY ++ L + +A LL EML K
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIA 991
Query: 183 PRSSTFDNIICCMCQKG---LINEALELMKKIVAK 214
P + F + + ++G L AL+ +VA+
Sbjct: 992 PSTINFRTVFYGLNREGKHDLARIALQKKSALVAQ 1026
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLC--KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
F EM +GLIP T+ I LC K V+EA + MI+ G P+ LG L
Sbjct: 736 FKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCL 795
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
CE G+ AK + +G G + + Y I + L ++ EA L +
Sbjct: 796 CEVGNTKDAKSCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFEGERSLLDQ 854
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
T+ +I+ + Q+G + +AL+ + + PG + +L+++
Sbjct: 855 YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVY 898
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G + +T +I K ++ L + +M++ G + D Y I++ + G
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E + EM+ G+ + TY + ++ + K KVD I D M+++
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL + C +G + +A +++E+ K + L+ + I++ GL + +A L + +++K+
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDA-LEIVDIMKRR 393
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
S+ + II ++ +++ALE + I P + ++ H
Sbjct: 394 KLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQH 442
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNV 85
A+ +MK G+ P + +++ ++ E ++E F EM+ G +PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLIT-VLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
Y+ LC+ +A +DS+ K+G P V + + ALC G L +A + +
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGER 849
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L+ +TY ++ GL+ + ++ +A + M + P + ++I ++ + + L
Sbjct: 850 SLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVL 909
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
E +K+ +S P + A++
Sbjct: 910 ETCQKMEGESCEPSVVTYTAMI 931
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
R +A + QMK +G P++ Y+ +L+ +GDY K DEL EM +GL+P+
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ K D + +++ + G N + L+ L +AG L +A+ + +M K
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLL---LEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
GV + + IM+ L EA L E +KC + ++C C+ G +
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDL---VMLNTMLCAYCRAGEM 428
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
+ +MKK+ ++ +P + L+
Sbjct: 429 ESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM-DALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M++ G P V+ + ++ +K + G A+ ++ ++ +GI+ D V Y VL+ + G
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ + +M V G P++Y Y+ +N + +A +++ M +G PN V
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TLL + G +++ ++ E+ G N Y +++DGL ++ EA + ++M K
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 180 CFYPRSSTFDN--IICCMCQKGLINEALELMK 209
RS + N +I +C+ EA EL +
Sbjct: 372 GV--RSDGYANSIMISALCRSKRFKEAKELSR 401
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 38/253 (15%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++L V D ++R R D + + M+Q G K V Y+ + V +
Sbjct: 89 LQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKN 146
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E++ + +VY N ++ L K K+D I++ D M + G KP+VVT NT
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 121 LLG-----------------------------------ALCEA-GDLSKAKGVMKEMGLK 144
LL A+C + G +A+ +++M ++
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G N++ Y +L+ K + +A L+ EM P ++ + GL + +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 205 LELMKKIVAKSFA 217
EL+ ++ + +A
Sbjct: 327 RELLSELESAGYA 339
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK---PDVVCYTIVLSGIVAEGDYV 62
F P +T +++ +K R D +L M++ + PD V YT V+S V G
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTL 121
+ ++ EM +G+ + TYNV + G CKQ ++D A ++ M + G +P+VV+ N +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ D + A EM +G+ +Y ++ + A+ + +EM+
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND-- 587
Query: 182 YPRSS----TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
PR ++ ++ C+ GLI +A ++ ++ F P + +L
Sbjct: 588 -PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSL 635
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 32 ILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
+L +M +D GI+PDVV Y I++ G + D F+EM G+ P +Y +
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 91 CKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
+ A ++ D M+ K +++ N L+ C G + A+ V+ M G N
Sbjct: 569 AMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ TY + +G+ + G+A LL +E+ ++C
Sbjct: 629 VATYGSLANGVSQARKPGDALLLWKEIKERC 659
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+PD + VL+ GD K +LF+EM PDV TYNV I + + + +
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+++ +I G K + T ++L+ A GDL A+ +++ M K +L
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDL 339
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD-------------YVKLDELFDEMLVLG 75
A+ ++ M + G P V +T ++ + A GD ++ D+ LV
Sbjct: 172 AVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVGQ 231
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
PD +N +N D+ ++ + M + C+P+V+T N ++ G
Sbjct: 232 SRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIV 291
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
V++ + KG+++ + T ++ VG ++ A +++ M +K
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREK 335
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 6/202 (2%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F MI + +AL ++ MK GIKPDV+ + ++SG + K+ E+ + M
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ G PDV ++ I+GL + ++A M+ G PN T TLL A +
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMK 305
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLLLEEMLKKCFYPRSSTFDNI 191
K + + G+E + +LD + GK I EA +L + KK + TF+++
Sbjct: 306 HGKEIHGYSVVTGLEDHGFVRSALLD-MYGKCGFISEAMILFRKTPKKT----TVTFNSM 360
Query: 192 ICCMCQKGLINEALELMKKIVA 213
I C GL ++A+EL ++ A
Sbjct: 361 IFCYANHGLADKAVELFDQMEA 382
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%)
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
D+ +N I+G ++ DEA+ +V M LG KP+V+T N L+ + K ++
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ M L G + ++ ++ ++ GLV + +A ++ML YP S+T
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + M+ K +AL + M+ G +PD V Y+IV+ + G +
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ +F EM IPD Y + ++ K V++A Q +M+ G +PNV TCN+LL
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
+++A +++ M G+ +L TY ++L
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
+Q G K D YT ++ + + +++L DEM+ G P+ TYN I+ + N +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+EA+ + + M + GCKP+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++ L + A L EM+ + P T++ ++ + AL+L + + F
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 217 AP 218
P
Sbjct: 536 EP 537
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + +M+ G+ PD Y+++++ + G +LF EM+ G P++ TYN+ ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
K A+++ M G +P+ VT + ++ L G L +A+ V EM K
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 149 NLHTYRIMLDGLVGKA-EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ Y +++D L GKA + +A + ML P T ++++ + I EA EL
Sbjct: 573 DEPVYGLLVD-LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 208 MKKIVAKSFAPGARAWEALL 227
++ ++A P + + LL
Sbjct: 632 LQNMLALGLRPSLQTYTLLL 651
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M + F P ++ LV RG A + + G+ P+ Y +++
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSH-RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
D +LF +ML ++PDV +Y + I G C++ +V+ A++++D M+ G P+
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD---- 259
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
TL+G LC+ G + K ++EM KG + ++ G ++ EA ++E ++K
Sbjct: 260 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 319
Query: 179 KCFYPRSSTFDNIICCMCQK 198
S T++ +I +C +
Sbjct: 320 NGETLHSDTWEMVIPLICNE 339
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + +M + + PDV Y I++ G +G EL D+ML G +PD I
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIG 264
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLC Q DE + ++ MI G P+ N L+ C G + +A V++ + G L
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ T+ +++ + + E + L LE+ +K+
Sbjct: 325 HSDTWEMVIPLICNEDESEKIKLFLEDAVKE 355
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL-CEAGDLSKA 134
L +++TY + + K ++ + M++ P N +L L G L KA
Sbjct: 117 LTGEIFTYLIKVYAEAKLP--EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+ K L GV N +Y +++ ++ A L +ML++ P ++ +I
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 195 MCQKGLINEALELMKKIVAKSFAP 218
C+KG +N A+EL+ ++ K F P
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVP 258
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 11/233 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS-----GI 55
+R G P + + ++ ++ A+ + M+ +PD+ Y ++S G+
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
AE + LF E+ + G PD TYN + ++ ++ ++ M K+G +
Sbjct: 348 AAEAE-----RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
+T NT++ + G L A + K+M GL G + TY +++D L EA+ L+
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
EML P T+ +IC + G EA + ++ P A+ +L
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G+ P + + MI L K +R DA ++++M++ K ++ + +L A D
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y K +++ + GL PD TYN I C+ + +E ++ M LG P + T +
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKS 1002
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A + L +A+ + +E+ KG++L+ Y M+ +A LL+ M
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P +T ++ G EA +++ +
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + MI + +A + +++ G PD V Y +L E + K+ E+
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALC 126
+ +M +G D TYN I+ KQ ++D A+Q+ M L G P+ +T L+ +L
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+A +A +M EM G++ L TY ++ G + EA ML+ P +
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ ++ + + +A L + +++ P +E ++L
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-DGIKPDVVCYTIVLSGIVAEG 59
M+K+GF M + +I K+ + AL + MK G PD + YT+++ +
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
V+ L EML +G+ P + TY+ I G K K +EA M++ G KP+ + +
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L L + KA G+ ++M G + Y +M+ GL+ + + + +M +
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL 572
Query: 180 C 180
C
Sbjct: 573 C 573
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK--LDELFDEMLVLGLIPDVYTYNVY 86
A +++ M+Q G PD++ + +++ + G EL D + GL PD TYN
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
++ + + +D A+++ + M C+P++ T N ++ G ++A+ + E+ LKG
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ TY +L + + + ++M K F T++ II ++G ++ AL+
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 207 LMK 209
L K
Sbjct: 424 LYK 426
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 101/216 (46%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+TD+I K++ A ++ ++Q G PD+ + ++S G Y + +F+ M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G P V + N+ ++ LC +++E +V+ + +G K + + +L A AG++
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+ K + M G + YR+M++ L + +A +++ EM + F + +++++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ +++ ++I P + L++
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLII 970
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + + ++ +E + QM++ G D + Y ++ +G
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 65 DELFDEMLVL-GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+L+ +M L G PD TY V I+ L K N+ EA ++ M+ +G KP + T + L+
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+AG +A+ M G + + Y +MLD L+ E +A L +M+ P
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTP 541
Query: 184 RSSTFDNII 192
+ ++ +I
Sbjct: 542 SYTLYELMI 550
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEG 59
M + G P V ++ L + R ++ LY++ + QD G K ++L G
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGR-LEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ++ +++ M G +P + Y + I LCK +V +A +V M + K + N
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++L D K V + + G+E + TY ++ E LL+++M
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P+ T+ ++I ++ + +A +L +++++K
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK--AKGV 137
V YN + + K +A ++VD+M + GC P++++ NTL+ A ++G L+ A +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
+ + G+ + TY +L + + A + E+M P T++ +I +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALL 227
GL EA L ++ K F P A + +LL
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ G P + +I ++ R + ++ QM+ G+ P + Y ++S +
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKC 1012
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++LF+E+L GL D Y+ + +A +++ M G +P + T +
Sbjct: 1013 LEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHL 1072
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + +G+ +A+ V+ + VEL Y ++D + + L EM K+
Sbjct: 1073 LMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEG 1132
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM 208
P + C + E +E+M
Sbjct: 1133 LEPDHRIW---TCFVRAASFSKEKIEVM 1157
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M LG P V +T +I + ++ D A +MK+ G+KP YT ++ G
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ K F+EM G+ P V TY ++ + + ++I M++ K +T N
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TLL + G +A+ V+ E G++ ++ TY ++++ + + LL+EM
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
P S T+ +I + A K +V P R++E L
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 7/231 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + ++ + + +L +M+ G++P+V YT ++S A G
Sbjct: 405 MRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLIS---AYGR 461
Query: 61 YVKLDEL----FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K+ ++ F M +GL P ++Y I+ ++A + M K G KP+V
Sbjct: 462 TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T ++L A +GD K + K M + ++ TY +LDG + EA ++ E
Sbjct: 522 TYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P T++ ++ + G + +L+K++ A + P + + ++
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 7/186 (3%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL I +M++ GI+ + + Y ++ +++ LF EM GL P TYN+ +
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG----VMKEMGL 143
+ ++ + D ++ M LG +PNV + L+ A +S MK++GL
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
K + H+Y ++ +A EEM K+ P T+ +++ + G +
Sbjct: 482 KP---SSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Query: 204 ALELMK 209
+E+ K
Sbjct: 539 LMEIWK 544
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 15/252 (5%)
Query: 4 LGFCPGVMDFTDM------IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
L P +F D+ I L +R DA + M + + PD V I+++ +
Sbjct: 261 LSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRK 320
Query: 58 EGDYVK-LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
G K + E+F++M G+ + + C + +EA+ I M K G + N +
Sbjct: 321 AGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTI 380
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
NTL+ A ++ + + +G+ EM KG++ + TY I++D + + LL EM
Sbjct: 381 VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM 440
Query: 177 LKKCFYPRSSTFDNIICCMCQ----KGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P ++ +I + + +A MKK+ K P + ++ A L+H+ S
Sbjct: 441 EDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK---PSSHSYTA-LIHAYS 496
Query: 233 DLTYSETTFAGL 244
+ E +A
Sbjct: 497 VSGWHEKAYASF 508
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P V +T ++ + + I M ++ IK + Y +L G +G Y+
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ ++ E +GL P V TYN+ +N + + + Q++ M L KP+ +T +T++
Sbjct: 573 EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
A D +A K M G + +Y + L KA+
Sbjct: 633 YAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAK 675
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ +T +I L K ER + + N M G KP++ + + + +V
Sbjct: 203 MEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRR 262
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++L M L + PD TYN+ I G D A ++ +M G KPN+ T
Sbjct: 263 AWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQT 322
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
++ LC+AG+ A + K+ K NL T ++L GLV K ++ +A ++E
Sbjct: 323 MIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 3/205 (1%)
Query: 27 MDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
+D Y+ + +M++ G+ PDVV YT ++S + V + L++ M++ G P++ T+NV
Sbjct: 193 LDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNV 252
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I L + + +A ++ M KL +P+ +T N ++ A A+ V M KG
Sbjct: 253 RIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKG 312
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ NL Y+ M+ L A + ++ ++K +YP T + ++ + +KG +++A
Sbjct: 313 YKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAK 372
Query: 206 ELMKKIVAKSFAPGARAWEALLLHS 230
+M+ + + P R+ + L L S
Sbjct: 373 SIMELVHRR--VPPFRSKQLLSLKS 395
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDE-LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
G K V + L + D + E L D G+ D ++N+ I C+ +D
Sbjct: 136 GCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A + M K G P+VVT TL+ AL + G+ M LKG + NL T+ + +
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
LV + +A+ LL M K P S T++ +I + A + + K + P
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKP 315
Query: 219 GARAWEALLLH----SGSDLTYS 237
+ ++ ++ + DL Y+
Sbjct: 316 NLKIYQTMIHYLCKAGNFDLAYT 338
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ MI L + R A I+ MK G+KP Y ++ G+ +G ++ +L +E
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
P YTY + + LCK+ +A +++ M++ N L LC + +
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNI 191
+ V+ M + +T +++GL + +A +L++M+ F P + T + +
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 192 ICCMCQKGLINEALELMKKIVAKS-FAPGARAWEALL-----LHSGSD 233
+C + +G EAL+++ +++ ++ PG A+ A++ LH G +
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDE 537
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
PGV+ + +IR L K +G +A+ + Q+++ + D Y I++ G+ +
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+D+++ D + Y ++ GLC+ + +A + + G PNVV NT++
Sbjct: 577 WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSR 636
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+G +A +++EM G + T+RI+
Sbjct: 637 SGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 6/187 (3%)
Query: 6 FC-PGVMDFTDMIRFLVKEERGMDALYILNQ-MKQDGIKPDVVCYTIVLSGI--VAEGDY 61
FC P + ++ L+ + R +AL +LN+ M ++ IKP VV Y V+ G+ + +GD
Sbjct: 478 FCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDE 537
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+F ++ + D TY + I+GLC NKVD A + D +I + +
Sbjct: 538 AM--SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAF 595
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L LC++G LS A + ++ G N+ Y ++ EA +LEEM K
Sbjct: 596 LKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQ 655
Query: 182 YPRSSTF 188
P + T+
Sbjct: 656 APDAVTW 662
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ P ++ + +I L R +A G PD ++++ ++ V
Sbjct: 85 GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVST 144
Query: 65 DELFDEMLVLG--LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ ++ +P + YN +N LC +V +A ++V M G P+VVT TL+
Sbjct: 145 LGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLI 204
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
G CE +L A V EM + G+ N T +++ G + ++ L++E+ + Y
Sbjct: 205 GGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE---Y 261
Query: 183 PRSST--------FDNIICCMCQKGLINEALELMKKI 211
++ T F N++ MC++G N+ E+ + +
Sbjct: 262 MKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K F P + ++ ++ L R +DA ++ M+ G PDVV +T ++ G +
Sbjct: 155 KKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELE 214
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-----GCKPNVVT 117
++FDEM V G+ P+ T +V I G K V+ +++ + +
Sbjct: 215 VAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAA 274
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ ++C G + + + M L + V + Y M+D L A+ ++ M
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEF-AYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K PR ++++ II +C+ G A +L+++ F P ++ L+
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLM 384
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + M+ K +AL + M+ G +PD V Y+IV+ + G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +F EM IPD Y + ++ K V++A Q +M+ G +PNV TCN+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
LL +++A +++ M G+ +L TY ++L
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + +I K A+ + +M+ G+ PD Y+++++ + G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+LF EM+ G P++ TYN+ ++ K A+++ M G +P+ VT +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLKK 179
++ L G L +A+ V EM K + Y +++D L GKA + +A + ML
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-LWGKAGNVEKAWQWYQAMLHA 603
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T ++++ + I EA EL++ ++A P + + LL
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
+Q G K D YT ++ + + +++L DEM+ G P+ TYN I+ + N +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+EA+ + + M + GCKP+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++ L + A L EM+ + P T++ ++ + AL+L + + F
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 217 APGARAWE---ALLLHSGSDLTYSETTFAGLFNQN 248
P + +L H G L +E F + +N
Sbjct: 536 EPDKVTYSIVMEVLGHCGY-LEEAEAVFTEMQQKN 569
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 77/157 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + M+ K +AL + M+ G +PD V Y+IV+ + G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +F EM IPD Y + ++ K V++A Q +M+ G +PNV TCN+
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
LL +++A +++ M G+ +L TY ++L
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + +I K A+ + +M+ G+ PD Y+++++ + G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+LF EM+ G P++ TYN+ ++ K A+++ M G +P+ VT +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLKK 179
++ L G L +A+ V EM K + Y +++D L GKA + +A + ML
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD-LWGKAGNVEKAWQWYQAMLHA 603
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T ++++ + I EA EL++ ++A P + + LL
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
+Q G K D YT ++ + + +++L DEM+ G P+ TYN I+ + N +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+EA+ + + M + GCKP+ VT TL+ +AG L A + + M G+ + TY ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++ L + A L EM+ + P T++ ++ + AL+L + + F
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 217 APGARAWE---ALLLHSGSDLTYSETTFAGLFNQN 248
P + +L H G L +E F + +N
Sbjct: 536 EPDKVTYSIVMEVLGHCGY-LEEAEAVFTEMQQKN 569
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M +G+ D+ Y+I + + G K +L+ EM + DV YN I +
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
V+ I++ M + GC+PNV T NT++ LCE G + A ++ EM +G + + TY
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYM 333
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ L +EI L M++ P+ T+ ++ + G + L + K +
Sbjct: 334 CLFSRLEKPSEILS---LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKES 390
Query: 215 SFAPGARAWEALL 227
P + A+ A++
Sbjct: 391 GDTPDSAAYNAVI 403
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 3/217 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G + ++ + + K + A+ + +MK +K DVV Y V+ I A
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+F EM G P+V T+N I LC+ ++ +A +++D M K GC+P+ +T L
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 338
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + ++ G M GV + TY +++ + + + M + P
Sbjct: 339 LEKPSEILSLFG---RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 395
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
S+ ++ +I + QKG+++ A E ++++ + +P R
Sbjct: 396 SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRR 432
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 48 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
+ ++L G G + K E + +M G+ D+++Y++Y++ +CK K +A+++ M
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
K +VV NT++ A+ + + V +EM +G E N+ T+ ++ L +
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+A +L+EM K+ P S T+ +C + +E L L +++ P
Sbjct: 312 DAYRMLDEMPKRGCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRP 359
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V +I+ L ++ R DA +L++M + G +PD + Y + S + +
Sbjct: 285 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSE 344
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF M+ G+ P + TY + + + + + + +M + G P+ N
Sbjct: 345 ILS---LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNA 401
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL + G L A+ +EM +G+
Sbjct: 402 VIDALIQKGMLDMAREYEEEMIERGL 427
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 77/136 (56%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G ++ +Y++ I+ LCK +V E+ + M K G P+V N L+ A C+A + A
Sbjct: 392 GYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA 451
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
K + EM ++G ++NL TY +++ L + E E+ L ++ML++ P + + ++I
Sbjct: 452 KKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Query: 195 MCQKGLINEALELMKK 210
+C++ I A+E+ +K
Sbjct: 512 LCKETKIEAAMEVFRK 527
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + + + + L + ++ + + G ++ Y++++S + G
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EM GL PDV YN I CK + A ++ D M GCK N+ T N
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L E G+ ++ + +M +G+E + Y +++GL + +I EA++ E+ +KC
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI-EAAM---EVFRKC 528
Query: 181 FYPRSST-----FDNIICCMCQKGLINEALELMKK 210
T + +C G EA +L+++
Sbjct: 529 MERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDG--IKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
+ +I LV + A ++L + G I PDV C + L+G+ ++G Y +LF +
Sbjct: 120 YRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDV-CNRL-LAGLTSDGCYDYAQKLFVK 177
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN-VVTCNTLLGALCEAG 129
M G+ + + VYI C+ ++ ++ +++VD + K N + +L +LC+
Sbjct: 178 MRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCS 237
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
A +++E+ + + YR++ + V + E ++L++ K PRSS +
Sbjct: 238 REMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYR 297
Query: 190 NIICCMCQKGLINEALELMKKIVAKSF 216
I + + EA E+ + IV+ F
Sbjct: 298 AFILDLISAKRLTEAKEVAEVIVSGKF 324
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 90/240 (37%), Gaps = 38/240 (15%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++ L K R MDA YIL +++ KPD + Y ++ V G+ + + + LG
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 76 LIPDVYTYNVYINGLCKQNKV----------------------------------DEAIQ 101
+ P Y +I L ++ D A++
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE 348
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+ M+ G P + T + L LC + + KG L +Y +M+ L
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+ E+ L+EM K+ P S ++ +I C+ +I A KK+ + F G +
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA----KKLWDEMFVEGCK 464
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
G+ F+D+I L + DA +L M G P + +V+ GD + E+
Sbjct: 371 GIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVL 430
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
M GL PDVYTY V I+G K +DEA +I+ K K + VT + L+ C+
Sbjct: 431 KLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKI 490
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLKKCFY 182
+ +A ++ EM GV+ N Y ++ KA + +A +L EEM +K +
Sbjct: 491 EEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLH 545
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G PG F ++ K +A +L M+ G+KPDV YT+++SG G +
Sbjct: 402 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 461
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ E TY+ I G CK + DEA+++++ M + G +PN N L+ +
Sbjct: 462 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 521
Query: 125 LC-EAGDLSKAKGVMKEMGLKGVELN 149
C +A D KA+ + +EM KG+ LN
Sbjct: 522 FCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 15 DMIRFLVKEERGMDA--LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++I + KE + +A +Y L + K+ + P V T++ + +G E+ ++
Sbjct: 306 NIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA-TLITALCKNDGTITFAQEMLGDLS 364
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ ++ I+ LC+ V +A ++ MI G P N ++ A + GDL
Sbjct: 365 GEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+AK V+K M +G++ +++TY +++ G + EA +L E KK T+ +I
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+ +EAL+L+ ++ P A + L+
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+ ++ GIKP ++ V+ + + L +M+ G P +N+ ++ K
Sbjct: 366 EARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTG 421
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
+DEA +++ M G KP+V T ++ + G + +A+ ++ E K +L+ TY
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYH 481
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ G E EA LL EM + P + ++ +I C K L E E++
Sbjct: 482 ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 28 DALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
D+L N + + P + Y + + + Y + ++ +M L L T
Sbjct: 93 DSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFI 152
Query: 87 INGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I K VD+A+++ + + K LGC+ V N+LL ALC+ A +++ M KG
Sbjct: 153 IEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKG 212
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ + TY I+++G ++ EA L+EM ++ F P + D +I + G + A
Sbjct: 213 LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
E++ K+ F P + + L+
Sbjct: 273 EMVSKMTKGGFVPDIQTFNILI 294
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG--IKPDVVCYTIVLSGIVAEGDYV 62
+ P M++ ++ + L ++ IL QMK I + +C+ I G G
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYG--KNGHVD 163
Query: 63 KLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ ELF+ + LG V YN ++ LC A ++ MI+ G KP+ T L
Sbjct: 164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C AG + +A+ + EM +G ++++GL+ + A ++ +M K F
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF 283
Query: 182 YPRSSTFDNIICCMCQKGLINEALEL 207
P TF+ +I + + G + +E+
Sbjct: 284 VPDIQTFNILIEAISKSGEVEFCIEM 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P +I L+ A ++++M + G PD+ + I++ I G+
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E++ LGL D+ TY I + K K+DEA +++++ ++ G KP
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +C G A +M +K N Y +++ + +A+ L EM +
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 181 FYPRSSTFDNIICCMCQKGLIN 202
P S FD M GL N
Sbjct: 423 LVPISRCFD-----MVTDGLKN 439
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A L++M + G P +++ G++ G E+ +M G +PD+ T+N+ I
Sbjct: 235 EAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILI 294
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ K +V+ I++ + KLG LC
Sbjct: 295 EAISKSGEVEFCIEMYYTACKLG--------------LC--------------------- 319
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+++ TY+ ++ + +I EA LL ++ P S + II MC+ G+ ++A
Sbjct: 320 VDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSF 379
Query: 208 MKKIVAKSFAPGARAWEALLLHSG 231
+ K+ P + L+ G
Sbjct: 380 FSDMKVKAHPPNRPVYTMLITMCG 403
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G + +T +I ++ A+ + +M+ +G +P VV YT + + A+G
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E++ EML + P+ +TY V + L K +EA+ I M ++G +P+ CN
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNI 267
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ + G+ S V+ M GV L Y I ++ L GE+ LL E+
Sbjct: 268 LIAKALKFGETSFMTRVLVYMKENGVVLR---YPIFVEALETLKAAGESDDLLREV 320
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G K D YT +L G + +F M G++ D TY I+ + VD A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+++ + M GC+P VV+ + L G + +A V KEM V N HTY ++++
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 160 LVGKAEIGEA 169
LV + EA
Sbjct: 237 LVATGKCEEA 246
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF +T M+ + R + + MK+ G+ D V YT ++ + + GD
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L++EM G P V +Y Y+ L +V+EA ++ M++ PN T L+
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLL 172
L G +A + +M GV+ + I L+ KA + GE S +
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNI----LIAKALKFGETSFM 281
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 3/169 (1%)
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ G D +TY ++ + ++ + M + G + VT +L+ + +GD+
Sbjct: 115 IKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVD 174
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A + +EM G E + +Y + L + EA+ + +EML+ P T+ ++
Sbjct: 175 GAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLM 234
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTF 241
+ G EAL++ K+ P A L+ L + ET+F
Sbjct: 235 EYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI---AKALKFGETSF 280
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-DGIKPDVVCYTIVLSGIVAEGDYVK 63
G P V +T ++ + DA IL++MK +PDV Y+ +L V +
Sbjct: 154 GLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDL 213
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV-DSMIKLGCKPNVVTCNTLL 122
+D L+ EM + P+ T N+ ++G + + D+ +++ D ++ CKP+V T N +L
Sbjct: 214 VDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIIL 273
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
G + + ++ G+E T+ I++ K + S ++E M K F
Sbjct: 274 SVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFP 333
Query: 183 PRSSTFDNIICCMCQKG 199
+ST++NII G
Sbjct: 334 WTTSTYNNIIEAFADVG 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
T+ + L+ +++ + AL + + +++ +P Y +L + G + +LFDEML
Sbjct: 92 TETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEML 151
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCNTLLGALCEAGDL 131
GL P V Y + + N +D+A I+D M C+P+V T +TLL A +A
Sbjct: 152 EEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQF 211
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML-KKCFYPRSSTFDN 190
+ KEM + + N T I+L G + +L +ML P T +
Sbjct: 212 DLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNI 271
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
I+ G I+ +K P R + L+ G Y +
Sbjct: 272 ILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDK 319
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 1 MRKLGFC-PGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
M+ C P V ++ +++ V + +D+LY +M + I P+ V IVLSG
Sbjct: 185 MKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLY--KEMDERLITPNTVTQNIVLSGYGR 242
Query: 58 EGDYVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
G + +++++ +MLV PDV+T N+ ++ K+D + G +P
Sbjct: 243 VGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETR 302
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T N L+G+ + K VM+ M TY +++ + L ++M
Sbjct: 303 TFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQM 362
Query: 177 LKKCFYPRSSTFDNIICCM 195
+ + TF CC+
Sbjct: 363 RSEGMKADTKTF----CCL 377
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
KPDV I+LS G ++ +++ G+ P+ T+N+ I K+ D+
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+++ M KL T N ++ A + GD + +M +G++ + T+ +++G
Sbjct: 323 VMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYA 382
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
A + + ++ K P ++ F N + C K
Sbjct: 383 N-AGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKA 419
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
+ P V F ++ + + A + +MK +KP VV Y ++ G
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ +EM + + + +N I+GL + ++ EA+ +++ P +VT N+L+
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKN 364
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+AGDL A ++K M +GV+ TY + E L ++++ P
Sbjct: 365 FCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T+ I+ +C+ G ++ A+++ K++ + P
Sbjct: 425 RLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP 458
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 88/185 (47%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P V + I+L+G + ++L++EM + + P V TY I G C+ +V A+++
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++ M + N + N ++ L EAG LS+A G+M+ + + TY ++
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
++ AS +L+ M+ + P ++T+++ + E + L K++ +P
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 223 WEALL 227
+ +L
Sbjct: 428 YHLIL 432
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P +V Y ++ GD ++ M+ G+ P TYN + K NK +E + +
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
+I+ G P+ +T + +L LCE G LS A V KEM +G++ +L T +++ L
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ EA + +++ P+ TF I + KG+ + A L
Sbjct: 473 LEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 4/184 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ K + + + + ++ + G PD + Y ++L + +G
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLA 444
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ EM G+ PD+ T + I+ LC+ ++EA + D+ ++ G P +T +
Sbjct: 445 MQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
Query: 125 LCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGK---AEIGEASLLLEEMLKKC 180
L G AK + M L + +TYR +D K I + + ++LK C
Sbjct: 505 LRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVDAPPDKDRRKSILHRAEAMSDVLKGC 564
Query: 181 FYPR 184
PR
Sbjct: 565 RNPR 568
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 34/215 (15%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+PDVV Y +++ + +G K EL+ M PDV N I+ LC + ++ EA++
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG---------------- 145
+ + + G PNVVT N+LL LC+ K +++EM LKG
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY 398
Query: 146 ------------------VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
E+ Y +M V + + + EM + P T
Sbjct: 399 SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRT 458
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
+ I + KG I EAL +++++K P R
Sbjct: 459 YTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
D+ ++L+G G+ + + +++ PDV +Y IN L K+ K+ +A+++
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
+M P+V CN ++ ALC + +A V +E+ KG + N+ TY +L L
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 164 AEIGEASLLLEEMLKK--CFYPRSSTFDNIICCMCQKGLINEALELMKK 210
+ L+EEM K P TF ++ + ++ LE M K
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAK 414
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 34/214 (15%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + MI L K+ + A+ + M PDV V+ + + + E+
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG--CKPNVVTCNTLLGAL 125
F E+ G P+V TYN + LCK + ++ ++V+ M G C PN VT + LL
Sbjct: 340 FREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYS 399
Query: 126 CEAGDL--------------------------------SKAKGVMKEMGLKGVELNLHTY 153
+ D+ K + + EM G+ + TY
Sbjct: 400 QRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTY 459
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
I + GL K +IGEA +EM+ K P T
Sbjct: 460 TIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 31 YILNQM--KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
YIL+Q+ KQ + Y +L + + + ++FDEM + TY V +N
Sbjct: 127 YILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLN 186
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVT------------------------------- 117
+KVDEA+ + + + G ++V
Sbjct: 187 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 246
Query: 118 ---CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
N +L C G++ +AK K++ ++ +Y M++ L K ++G+A L
Sbjct: 247 IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
M P +N+I +C K I EALE+ ++I K P + +LL H
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKH 361
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL M+ G+ D Y ++L+ +V E + D +FD++ V G + V T+++ +
Sbjct: 201 ALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSILVK 259
Query: 89 GLCKQNKVDEA-----------------------------------IQIVDSMIKLGCKP 113
CKQ K+DEA +++D + +G
Sbjct: 260 KFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVN 319
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMG-LKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
N + AL +AG L+ ++++ L+G EL + Y M+ L+ + + +
Sbjct: 320 MDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDI 379
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
L EM+ + P T + +C C+ G ++EALEL + FAP A ++ L+
Sbjct: 380 LTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLI 434
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%)
Query: 39 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
+G + +V Y ++ ++ E + + ++ EM+V G+ P+ T N + CK VDE
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A+++ S ++G P ++ N L+ LC + +A V+K +G L T+ + +
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L K + A L+ ++ P+ II +C G + +AL
Sbjct: 471 ALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL 517
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 1/200 (0%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL-GLIP 78
L + + +A +L+++K G Y I + ++ G + ++ L G
Sbjct: 296 LCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCEL 355
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
+V+ YN + L K+N +D I+ M+ G PN T N L C+AG + +A +
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
+ G +Y ++ L + +A +L+ + + + TF + +C K
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 199 GLINEALELMKKIVAKSFAP 218
G + A EL+ + P
Sbjct: 476 GKPDMARELVIAAAERDLLP 495
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 87/227 (38%), Gaps = 35/227 (15%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + + M +DGI P V ++L + F ++ G Y V I
Sbjct: 622 ARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIV 680
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE-------- 140
GLCK NK+D+A+ ++ M G +P++ + LC +A G++ E
Sbjct: 681 GLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRI 740
Query: 141 ------------MGLKGVELNLHTYRIMLDGLVGKAEIGEASLL-------------LEE 175
M KGV R + D + +GE L L+E
Sbjct: 741 TAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDE 800
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
+++KC YP N++ M +A E++++I + + P R
Sbjct: 801 VIEKC-YPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRGYVPNERT 846
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 50 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
I++ + ++ + + +L DE+ ++G + YN++I L K ++ + + L
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 110 -GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 168
GC+ V N+++ L + +L ++ EM ++GV N T L + E
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 169 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
A L + F P + +++ +I +C + +A +++K + + G + + L
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTL 468
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 45/228 (19%)
Query: 10 VMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V + M+ L+KE +D +Y IL +M G+ P+ L G + EL+
Sbjct: 357 VFRYNSMVFQLLKEN-NLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+G P +YN I+ LC V++A ++ I G T +TL ALC
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRI-------------------MLDGLVGKAEIGE- 168
G A+ E+ + E +L RI M++ L K+ +
Sbjct: 476 GKPDMAR----ELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTS 531
Query: 169 -------------------ASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
A+ L+ M +K + P S + N+I C+C+
Sbjct: 532 FKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL--GLIPDVYTYNVY 86
A+ + +M + G VV + +L+ + + ++ +LFDE + PD +Y +
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I C K ++A++I+ M G + ++ T+LG+L + G + +A+ + EM KG
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+L+ Y + L K L+EEM P + +++ ++ C KG+++EA
Sbjct: 241 DLDNTVYNVRLMN-AAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA-- 297
Query: 207 LMKKIVAKSFAPGARAWEALLLH 229
KK+ P A + L+ H
Sbjct: 298 --KKVYEGLEQPNAATFRTLIFH 318
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 22 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
K E+ M+ I+ M+ G++ ++ +T +L + G + + L+ EM+ G D
Sbjct: 189 KPEKAME---IMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNT 245
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
YNV + K++ + ++++ M +G KP+ V+ N L+ A C G +S+AK V +
Sbjct: 246 VYNVRLMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYE-- 302
Query: 142 GLKGVELNLHTYRIML 157
GL+ + N T+R ++
Sbjct: 303 GLE--QPNAATFRTLI 316
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
++L+I +M G D Y + L E ++ EL +EM +GL PD +YN +
Sbjct: 229 ESLWI--EMVNKGCDLDNTVYNVRLMNAAKESPE-RVKELMEEMSSVGLKPDTVSYNYLM 285
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
C + + EA ++ + + +PN T TL+ LC G + V K+ +
Sbjct: 286 TAYCVKGMMSEAKKVYEGL----EQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKI 341
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ T + + +GLV + +A + ++KK F PR
Sbjct: 342 PDFKTCKHLTEGLVKNNRMEDARGVA-RIVKKKFPPR 377
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F +I K R DA + ++M + G+ D V + ++ G + + L +M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G+ PD TYN+ ++ ++ A++ + K+G P+ VT +L LC+ ++
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+ + V+ EM + ++ H+ +++ V + + +A L E C S+T +I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL-SSTTLAAVI 486
Query: 193 CCMCQKGLINEA 204
+KGL EA
Sbjct: 487 DVYAEKGLWVEA 498
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 62/122 (50%)
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+N I+ K ++++A + M+K G + VT NT++ G LS+A+ ++K+M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
KG+ + TY I+L +I A ++ K +P + T ++ +CQ+ ++
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 202 NE 203
E
Sbjct: 427 AE 428
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 36/249 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + + + L + +A IL +M G KP Y +++ V G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ---------------IVDS 105
+L++ M G+ P+ Y ING + V+EAIQ ++ S
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 106 MI----KLGC----------------KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+I K+GC P+V N++L + G +S+A+ + + KG
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ ++ M+ G + EA + EEM + ++F+ ++ C G ++E
Sbjct: 721 T-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECC 779
Query: 206 ELMKKIVAK 214
EL +++ +
Sbjct: 780 ELFHEMLVE 788
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G + DV+ Y +++ + K LF M G PD TYN L + VDEA
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+I+ M+ GCKP T ++ + G LS A + + M GV+ N Y +++G
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
+ EA M + ++I + G + EA + K+ P
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 220 ARAWEALL 227
A ++L
Sbjct: 690 VAASNSML 697
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+++ MI+ K + AL + MK G PD Y + + + +
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
EML G P TY I + + +A+ + ++M K G KPN V +L+ E+G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-GKAEIG---EASLLLEEMLKKCFYPRS 185
+ +A + M GV+ N I+L L+ +++G EA + ++M P
Sbjct: 635 MVEEAIQYFRMMEEHGVQSN----HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAK 214
+ ++++ G+++EA + + K
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREK 719
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVV-TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+N +++++ KP + T NTL+ +AG L+ A + EM GV ++
Sbjct: 282 RNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTV 341
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
T+ M+ + EA LL++M +K P + T++ ++ G I ALE +KI
Sbjct: 342 TFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKI 401
Query: 212 VAKSFAPGARAWEALL 227
P A+L
Sbjct: 402 RKVGLFPDTVTHRAVL 417
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F +I L K R +A+ + +M + G +PD Y +++ + + DE+ D+M
Sbjct: 325 FNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMK 384
Query: 73 VLGL--IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
G + + Y ++ LC +++ A+ + SM GCKP + T + L+G +C
Sbjct: 385 SAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQ 444
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRI 155
L++A G+ KE KG+ ++ YR+
Sbjct: 445 LTRANGLYKEAAKKGIAVSPKEYRV 469
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 9/205 (4%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLS---GIVAEGDYVKL----DELFDEMLVLGLIPDV 80
+A + +M + G + Y ++L + + D KL +++ EM G+ +
Sbjct: 263 EATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNT 322
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
T+NV IN LCK + +EA+ + M + GC+P+ T L+ +L +A + + ++ +
Sbjct: 323 ETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDK 382
Query: 141 MGLKGVE--LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
M G LN Y L L G + A + + M P T+D ++ MC
Sbjct: 383 MKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCAN 442
Query: 199 GLINEALELMKKIVAKSFAPGARAW 223
+ A L K+ K A + +
Sbjct: 443 NQLTRANGLYKEAAKKGIAVSPKEY 467
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 20 LVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
LV+ R +M+ D G+K D T+V+ + +G + + E + + P
Sbjct: 185 LVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKG-HASIAEKMVKNTANEIFP 243
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG---ALCEAGDLSK-- 133
D ++ I+G C K+DEA ++ M + G + N +L LC D K
Sbjct: 244 DENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQ 303
Query: 134 --AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+ V+ EM +GV N T+ ++++ L EA L M + P + T+ +
Sbjct: 304 PEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVL 363
Query: 192 ICCMCQKGLINEALELMKKIVAKSF 216
I + Q I E E++ K+ + +
Sbjct: 364 IRSLYQAARIGEGDEMIDKMKSAGY 388
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR GF + D L K+ R +AL + +Q+K PDVV +T ++ G
Sbjct: 191 MRTEGFTNEAVKMFDA---LSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQ 247
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD-EAIQIVDSMIKLGCKPNVVTCN 119
+ ++F ML G+ P+ YTY+V I GL K +A + + M+ G PN T
Sbjct: 248 AKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYT 307
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKG 145
+ A G A+ +++EM KG
Sbjct: 308 AVFEAFVREGKEESARELLQEMKGKG 333
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 5/174 (2%)
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
D L E+F +M G + + L K + EA+++ + P+VV
Sbjct: 180 DPKNLQEIFHKMRTEGFTNEAVKM---FDALSKDGRTHEALELFSQIKDKNRMPDVVAHT 236
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG-EASLLLEEMLK 178
++ A AG + V M GV N +TY +++ GL + +A L EM+
Sbjct: 237 AIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMG 296
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA-WEALLLHSG 231
P ++T+ + ++G A EL++++ K F P +A EAL G
Sbjct: 297 NGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRG 350
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Query: 45 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 104
V+ Y +++ + ++++++++ EM G++PD T+N ++G +++ +
Sbjct: 909 VIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLS 968
Query: 105 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI-MLDGLVGK 163
+MI G KPN + + +LC+ GD+ KA + + M KG L + +++ L+ K
Sbjct: 969 AMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISK 1028
Query: 164 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
EI +A L + + + +DNII + +G ++ A+ L+ ++ PG+ ++
Sbjct: 1029 GEIPKAEDFLTRVTRNGMM--APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSY 1086
Query: 224 EALL 227
++++
Sbjct: 1087 DSVI 1090
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
PDV+ N ++ LC++ + A ++ + LG K + VT L+G C GD+ +A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
+ E+ KG + ++++Y +L GL K +L+EM + STF ++ C+
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 198 KGLINEALELMKKIVAKSFAPG 219
EA K+IV K F G
Sbjct: 441 ARQFEEA----KRIVNKMFGYG 458
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L + ML IP +Y+ INGL + N++D+A+ M++LG P++ T + L+
Sbjct: 1069 HLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKF 1128
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
CEA + +++ ++K M G + ++ ++D + +AS ++ EM++KC Y
Sbjct: 1129 CEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMM-EMMQKCGY 1184
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ LGF + F +I + E A+ L+++ G KPDV Y +LSG+ +G
Sbjct: 349 LEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGL 408
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+ + DEM G++ + T+ + + G CK + +EA +IV+ M G
Sbjct: 409 WQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYG 458
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+++LN M ++ P Y V++G++ K + EM+ LGL P + T++ ++
Sbjct: 1067 AVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVH 1126
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
C+ +V E+ +++ SM+ LG P+ T++ + KA +M+ M G E+
Sbjct: 1127 KFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEV 1186
Query: 149 NLHTYRIMLDGLVGKAE 165
+ T+ ++ + E
Sbjct: 1187 DFETHWSLISNMSSSKE 1203
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 26 GMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
G + Y+ + +++ G K D V + I++ EGD + E++ G PDVY+YN
Sbjct: 338 GSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYN 397
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
++GL ++ I+D M + G ++ T ++ C+A +AK ++ +M
Sbjct: 398 AILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKM 454
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP-----DVYTYNVYINGLCKQNK 95
++ + Y VL + G + + +LFD + P ++ T+NV +NG C K
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+EA+++ M C P+ ++ N L+ LC+ L++A+ + EM K V+ + +TY +
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
++D + +I E + + M++ P + ++ + + + G +++A +V+K
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ + QM PD + + +++ + + ++L+ EM + PD YTY + +
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ K+ K+DE +M++ +PN+ N L L +AG L AK +M + ++
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLK 486
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++ Y+ ++ L + E +++EML
Sbjct: 487 MDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 9/220 (4%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +++ LV + A+ I M G D V Y+ ++ G V D + +L
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 68 FDEML--VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP--NVVTCNTLLG 123
+ E+ + G + D Y + G + EA++ + + K + + N +L
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLE 318
Query: 124 ALCEAGDLSKA----KGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AL E G +A V KE + + +NL T+ +M++G + EA + +M
Sbjct: 319 ALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGD 378
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P + +F+N++ +C L+ EA +L ++ K+ P
Sbjct: 379 FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKP 418
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + + M G+ V Y ++S E Y ++ +++D+M + PDV +Y + I
Sbjct: 266 ARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIK 322
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+ + +EA+ + + M+ G +P N LL A +G + +AK V K M +
Sbjct: 323 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP 382
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+L +Y ML V +++ A + + F P T+ +I + + + +E+
Sbjct: 383 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 442
Query: 209 KKI 211
+K+
Sbjct: 443 EKM 445
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 113/247 (45%), Gaps = 10/247 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K+G P V+ +T ++ + + +A I +M+ G +P + Y I+L V
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 224
Query: 61 YVKLDELFDEML---VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ + +E+F+ +L L PD Y++ I K ++A ++ SM+ G + VT
Sbjct: 225 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 284
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEM 176
N+L+ ++SK + +M ++ ++ +Y +++ G+A E +L + EEM
Sbjct: 285 YNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAY-GRARREEEALSVFEEM 340
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH--SGSDL 234
L P ++ ++ G++ +A + K + P ++ +L + SD+
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 235 TYSETTF 241
+E F
Sbjct: 401 EGAEKFF 407
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ P V+ + +I+ + R +AL + +M G++P Y I+L G
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F M + PD+++Y ++ + ++ A + + G +PN+VT T
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +A D+ K V ++M L G++ N ++D G A +EM + C
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESC 483
Query: 181 FYPRSSTFDNIICCMCQ-KGLINEALEL 207
P N++ + + + EA EL
Sbjct: 484 GVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 6/221 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM---KQDGIKPDVVCYTIVLSGIVA 57
M+ G P + + +++ V+ ++ +A + + K+ +KPD Y +++
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
G+Y K ++F M+ G+ TYN + + E +I D M + +P+VV+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVS 316
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ A A +A V +EM GV Y I+LD + +A + + M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ +P ++ ++ + A + K+I F P
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 417
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 6/202 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L+ + + G P+V+ YT ++ G + +F M G P TY + +
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 89 GLCKQNKVDEAIQIVDSMI---KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+ +K EA ++ ++++ K KP+ + ++ +AG+ KA+ V M KG
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V + TY ++ E+ S + ++M + P ++ +I + EAL
Sbjct: 278 VPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 334
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+ ++++ P +A+ LL
Sbjct: 335 SVFEEMLDAGVRPTHKAYNILL 356
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+LN+MK+ I P + Y +++ G+ K+ + E+ ++PD YTYNV++ L
Sbjct: 145 LLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALA 204
Query: 92 KQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
N + ++++ M + G P+ T + + +AG KA+ ++E+ +K + +
Sbjct: 205 ATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDF 264
Query: 151 HTYR--IMLDGLVGK---------------------AEIGEASLLLE-------EMLKKC 180
Y+ I L G +GK A + +L++ E L K
Sbjct: 265 TAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKE 324
Query: 181 FYPRSSTFD----NI-ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ST+D N+ I Q+GLI +A EL +K + A+ WE +
Sbjct: 325 WQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFM 376
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 21 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
V EERGM+ + I D+V ++ E +V L E L
Sbjct: 80 VMEERGMN-----KTVSDQAIHLDLVAKAREITA--GENYFVDLPETSKTEL-------- 124
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
TY +N CK+ ++A +++ M +L P+ ++ N+L+ + G+ K +++E
Sbjct: 125 -TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK-CFYPRSSTFDNIICCMCQKG 199
+ + V + +TY + + L +I ++EEM + P +T+ N+ G
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 200 LINEALELMKKIVAKSFAPGARAWEALL 227
L +A + ++++ K+ A++ L+
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLI 271
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
DE+F +M GLIP+ ++GLCK V EA+++ M G P VV ++ A
Sbjct: 119 DEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+A + AK + ++M G+ N +Y +++ GL + +A EML+ P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR---------------AWEALLLH 229
TF ++ +C+ + +A + + K FA + AWEA+
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKK 295
Query: 230 SGSDLTY 236
++ +
Sbjct: 296 KPTEKPF 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 27 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
+A+ + M+ G P+VV YT V+ +F +M G+ P+ ++Y V
Sbjct: 148 QEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVL 207
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+ GL N +D+A+ M++ G PNV T L+ ALC + +A+ + + KG
Sbjct: 208 VQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+N+ + +D + ++ ++ +K F
Sbjct: 268 AVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTEKPF 302
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
D+ I +MK+ G+ P+ V +L G+ +G + +LF M G IP+V Y +
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
CK +K+++A +I M G PN + L+ L L A EM G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
N+ T+ ++D L + +A ++ + +K F
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
DE+F +M GLIP+ ++GLCK V EA+++ M G P VV ++ A
Sbjct: 119 DEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+A + AK + ++M G+ N +Y +++ GL + +A EML+ P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR---------------AWEALLLH 229
TF ++ +C+ + +A + + K FA + AWEA+
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKK 295
Query: 230 SGSDLTY 236
++ +
Sbjct: 296 KPTEKPF 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 27 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
+A+ + M+ G P+VV YT V+ +F +M G+ P+ ++Y V
Sbjct: 148 QEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVL 207
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+ GL N +D+A+ M++ G PNV T L+ ALC + +A+ + + KG
Sbjct: 208 VQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+N+ + +D + ++ ++ +K F
Sbjct: 268 AVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTEKPF 302
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
D+ I +MK+ G+ P+ V +L G+ +G + +LF M G IP+V Y +
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
CK +K+++A +I M G PN + L+ L L A EM G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
N+ T+ ++D L + +A ++ + +K F
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + + M G+ V Y ++S E Y ++ +++D+M + PDV +Y + I
Sbjct: 273 ARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIK 329
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+ + +EA+ + + M+ G +P N LL A +G + +AK V K M +
Sbjct: 330 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP 389
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+L +Y ML V +++ A + + F P T+ +I + + + +E+
Sbjct: 390 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 449
Query: 209 KKI 211
+K+
Sbjct: 450 EKM 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 113/247 (45%), Gaps = 10/247 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K+G P V+ +T ++ + + +A I +M+ G +P + Y I+L V
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 231
Query: 61 YVKLDELFDEML---VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ + +E+F+ +L L PD Y++ I K ++A ++ SM+ G + VT
Sbjct: 232 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 291
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEM 176
N+L+ ++SK + +M ++ ++ +Y +++ G+A E +L + EEM
Sbjct: 292 YNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAY-GRARREEEALSVFEEM 347
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH--SGSDL 234
L P ++ ++ G++ +A + K + P ++ +L + SD+
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 235 TYSETTF 241
+E F
Sbjct: 408 EGAEKFF 414
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ P V+ + +I+ + R +AL + +M G++P Y I+L G
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F M + PD+++Y ++ + ++ A + + G +PN+VT T
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +A D+ K V ++M L G++ N ++D G A +EM + C
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESC 490
Query: 181 FYPRSSTFDNIICCMCQ-KGLINEALEL 207
P N++ + + + EA EL
Sbjct: 491 GVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 6/221 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM---KQDGIKPDVVCYTIVLSGIVA 57
M+ G P + + +++ V+ ++ +A + + K+ +KPD Y +++
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
G+Y K ++F M+ G+ TYN ++ + E +I D M + +P+VV+
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVS 323
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ A A +A V +EM GV Y I+LD + +A + + M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ +P ++ ++ + A + K+I F P
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 424
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 6/202 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L+ + + G P+V+ YT ++ G + +F M G P TY + +
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 89 GLCKQNKVDEAIQIVDSMI---KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+ +K EA ++ ++++ K KP+ + ++ +AG+ KA+ V M KG
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V + TY ++ E+ S + ++M + P ++ +I + EAL
Sbjct: 285 VPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 341
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+ ++++ P +A+ LL
Sbjct: 342 SVFEEMLDAGVRPTHKAYNILL 363
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
Q+ + + DVV Y +++ G+V + V+ ELFD M + D+ ++N I+G + N
Sbjct: 173 QLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP----LRDLVSWNSLISGYAQMN 228
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK--------------- 139
EAI++ D M+ LG KP+ V + L A ++GD K K +
Sbjct: 229 HCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLAT 288
Query: 140 ------------EMGLKGVEL----NLHTYRIMLDGLVGKAEIGEASL-LLEEMLKKCFY 182
+ ++ EL L T+ M+ GL GE ++ +M+
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN-GELTVDYFRKMVSSGIK 347
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKI 211
P TF +++ GL++EA L ++
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQM 376
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 8 PGVMDFTDMIRF-LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE--GDYVKL 64
P F +IR + E + + +M++ + PD + V A+ GD +
Sbjct: 77 PSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLV 136
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L + L GL+ D++T N I +D A+Q+ D + +VVT N L+
Sbjct: 137 KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE----NPQRDVVTYNVLIDG 192
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L +A ++ +A+ + M L+ +L ++ ++ G EA L +EM+ P
Sbjct: 193 LVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 185 SSTFDNIICCMCQKG 199
+ + + Q G
Sbjct: 249 NVAIVSTLSACAQSG 263
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD---------YVKLDELF-DEMLVLGLI 77
+A+ + ++M G+KPD V LS GD Y K LF D L GL+
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 78 ---------------------PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
++T+N I GL + + M+ G KP+ V
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAE-IGEASLLLE 174
T ++L +G + +A+ + +M L V + Y M D L+G+A I EA+ ++E
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMAD-LLGRAGLIEEAAEMIE 410
Query: 175 EMLK 178
+M K
Sbjct: 411 QMPK 414
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM-LVLGLIPDVYTYNVYINGL 90
+ QM GI+PDV ++ G V +F +M +V P+ +TY+ I+GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
C Q + A +++ M G PN + N+L+ A +G++ A + EM G ++
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+YR ++D K + EA+ LLE + +K R S +D ++
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDS-YDKLV 435
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 47 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
Y I + + A Y ++D++ +++L + I + YN I K K+ A+ I M
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 107 I---KLGCKPNVVTCNTLLGALCEAGD--------LSKAKGVMKEMGLKGVELNLHTYRI 155
+ L C+P + T + L AL G+ + + + ++M G+E ++
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 156 MLDGLVGKAEIGEASLLLEEM--LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
++ G V + +A + +M + C P S T+D +I +C +G A EL+ ++
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDC-EPNSFTYDYLIHGLCAQGRTINARELLSEMKG 352
Query: 214 KSFAPGARAWEALL 227
K F P +++ +L+
Sbjct: 353 KGFVPNGKSYNSLV 366
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 7/239 (2%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I++L K E+ A + ++ G K D Y ++ + +G K E+++ M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ D TY + I L K ++D A ++ M + +P+ ++L+ ++ +AG L
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+ V EM G + + ++D ++ A L +EM K F P + II
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL-LHSGSDLT------YSETTFAGL 244
+ G + A+ + K + F P + LL +H+GS Y+ T AGL
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KL F P ++ T ++ +VKE +L+ + KQ P CY ++ G+ D+V
Sbjct: 165 KLQFVPNMVHITQSLK-IVKEVDAALSLFRWAK-KQPWYLPSDECYVVLFDGLNQGRDFV 222
Query: 63 KLDELFDEMLVLGLIPDVYTYNVY---INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ LF+EM+ ++N Y I L K K++ A + GCK + T N
Sbjct: 223 GIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYN 282
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ G KA + + M L+ TY +++ L + A L ++M ++
Sbjct: 283 NLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKER 342
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S F +++ M + G ++ ++++ ++ P A + +L+
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L K R A + QMK+ ++P ++ ++ + G +++ EM G
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
P + I+ K K+D A+++ D M K G +PN ++ + ++G L A
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V K+M G TY +L+ G ++ A + M P S++ +++ +
Sbjct: 439 TVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 498
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
K L++ A +++ ++ A ++ A + L+++
Sbjct: 499 ANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIY 532
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 86/199 (43%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A I M++ D Y +++ + G +LF +M L P ++ ++
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+ K ++D ++++ M G +P+ +L+ + +AG L A + EM G
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N Y ++++ ++ A + ++M K F P ST+ ++ G ++ A+++
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 209 KKIVAKSFAPGARAWEALL 227
+ PG ++ +LL
Sbjct: 477 NSMTNAGLRPGLSSYISLL 495
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P F +I K + AL + ++MK+ G +P+ YT+++ G
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F +M G +P TY+ + +VD A++I +SM G +P + + +
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 493
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
LL L + A ++ EM G +++
Sbjct: 494 LLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
++ + P ++ +I + K+ + A+++ ++MK G +PD Y +++ + D
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 62 VKLDE----LFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K E D+M + P+V TYN+ + + KVD+ + + P+V
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T N ++ A + G + + + V+ M + ++ T+ +++D K E + + +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
++ P TF+++I + +I++A + KK+ ++ P +E +++ G
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+P+VV Y I+L G +++ LF ++ + + PDVYT+N ++ K + E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
++ M CKP+++T N L+ + + + K + K + + L T+ M+
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY- 323
Query: 162 GKAE-IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
GKA I +A + ++M + P T++ +I G ++ A E+ +++
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 6/218 (2%)
Query: 20 LVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
L K ++ + L + M KQ PD Y+ ++S + +G LF EM G P
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIV----DSMIKL-GCKPNVVTCNTLLGALCEAGDLSK 133
D YN I +A++ V D M + C+PNVVT N LL A ++G + +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
+ K++ + V +++T+ ++D I E +L M P TF+ +I
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+K + + K ++ P + +++++ G
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++R + + + + + PDV + V+ G +++ +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M PD+ T+NV I+ K+ + ++ Q S+++ KP + T N+++ +
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYR--IMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
A + KA+ V K+M + TY IM+ G G + A + EE+ + ++
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG--SVSRAREIFEEVGESDRVLKA 383
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
ST + ++ C+ GL EA +L A P A ++ L
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L +M+ + KPD++ + +++ + ++ K+++ F ++ P + T+N I
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVT--CNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
K +D+A + M + P+ +T C ++ C G +S+A+ + +E+G L
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLK 382
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
T ML+ EA L +P +ST+ + + + + LMK
Sbjct: 383 ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Query: 210 KIVAKSFAPGARAWEALLLHSGSDL 234
K+ P R + L GS L
Sbjct: 443 KMEKDGIVPNKRFFLEALEVFGSRL 467
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 7/175 (4%)
Query: 77 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA-- 134
IPD Y+ I+ + K+ + A+ + M GC+P+ N L+ A D +KA
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 135 --KGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+G + +M G++ + N+ TY I+L ++ + + L +++ P TF+ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYS--ETTFAGL 244
+ + G+I E ++ ++ + P + L+ G + E TF L
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
++ + P ++ +I + K+ + A+++ ++MK G +PD Y +++ + D
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 62 VKLDE----LFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K E D+M + P+V TYN+ + + KVD+ + + P+V
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T N ++ A + G + + + V+ M + ++ T+ +++D K E + + +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
++ P TF+++I + +I++A + KK+ ++ P +E +++ G
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+P+VV Y I+L G +++ LF ++ + + PDVYT+N ++ K + E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
++ M CKP+++T N L+ + + + K + K + + L T+ M+
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY- 323
Query: 162 GKAE-IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
GKA I +A + ++M + P T++ +I G ++ A E+ +++
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 6/218 (2%)
Query: 20 LVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
L K ++ + L + M KQ PD Y+ ++S + +G LF EM G P
Sbjct: 107 LGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIV----DSMIKL-GCKPNVVTCNTLLGALCEAGDLSK 133
D YN I +A++ V D M + C+PNVVT N LL A ++G + +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
+ K++ + V +++T+ ++D I E +L M P TF+ +I
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+K + + K ++ P + +++++ G
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++R + + + + + PDV + V+ G +++ +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M PD+ T+NV I+ K+ + ++ Q S+++ KP + T N+++ +
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYR--IMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
A + KA+ V K+M + TY IM+ G G + A + EE+ + ++
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG--SVSRAREIFEEVGESDRVLKA 383
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
ST + ++ C+ GL EA +L A P A ++ L
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L +M+ + KPD++ + +++ + ++ K+++ F ++ P + T+N I
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVT--CNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
K +D+A + M + P+ +T C ++ C G +S+A+ + +E+G L
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLK 382
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
T ML+ EA L +P +ST+ + + + + LMK
Sbjct: 383 ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Query: 210 KIVAKSFAPGARAWEALLLHSGSDL 234
K+ P R + L GS L
Sbjct: 443 KMEKDGIVPNKRFFLEALEVFGSRL 467
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 7/175 (4%)
Query: 77 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA-- 134
IPD Y+ I+ + K+ + A+ + M GC+P+ N L+ A D +KA
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 135 --KGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+G + +M G++ + N+ TY I+L ++ + + L +++ P TF+ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYS--ETTFAGL 244
+ + G+I E ++ ++ + P + L+ G + E TF L
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A I +M I P+ Y+ ++S G+ L+DEM GL P + YN +
Sbjct: 277 EAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
L +++ DEA++++ + + G KP+ VT N+++ LCEAG L A+ V+ M + +
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 148 LNLHTYRIMLDGL 160
+ T+ L+ +
Sbjct: 397 PTVDTFHAFLEAV 409
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 2 RKLG-FC--PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
R++G +C P ++ MI K D+L + ++MK+ G+ P + Y ++ + E
Sbjct: 283 REMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRE 342
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ + +L ++ GL PD TYN I LC+ K+D A ++ +MI P V T
Sbjct: 343 DCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF 402
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+ L EA + K V+ +M + + T+ ++L L + A + EM +
Sbjct: 403 HAFL----EAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDR 458
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ + I + G + +A E+ ++ +K F
Sbjct: 459 FEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G PG+ + ++ L +E+ +A+ ++ ++ ++G+KPD V Y ++ + G
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ M+ L P V T++ ++ + ++ ++++ M P T
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLL 435
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+LG L + A + EM + N Y + GL+ + +A + EM K
Sbjct: 436 ILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
Query: 181 F 181
F
Sbjct: 496 F 496
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 76 LIP-DVYTYNVYINGLCK-QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
L P DV +NV +NG C V EA +I M PN + + ++ + G+L
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
+ + EM +G+ + Y ++ L + EA L++++ ++ P S T++++I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+ G ++ A ++ +++++ +P + A L
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFL 406
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++ V+ ++ A ++L Q+KQ G KP V Y +++ ++A Y + E
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M IP+ Y V +N L K+ K DEA+ V+ M G + L LC
Sbjct: 651 FRKMQKSS-IPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 128 AGDLSKAKGVMKEMG---LKGVELNLH-------------------------TYRIMLDG 159
AG ++ ++ + LK +E ++ TY ++
Sbjct: 710 AGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQA 769
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
V I A+ + ++M K C P T + ++ Q GL EA EL +K+
Sbjct: 770 CVDSGNIKNAAYIFDQMKKVC-SPNLVTCNIMLKAYLQGGLFEEARELFQKM 820
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCY-----TIVLSGIVAEGDYV---- 62
+T + L K R ++AL + + M Q PD+V Y T+ +G + E YV
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 63 ------KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K E L PDV YN +N ++ + + A ++ + + G KP+ V
Sbjct: 570 RSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPV 629
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T ++ + + ++M + N YR++++ L + + EA +E+M
Sbjct: 630 TYGLIMEVMLACEKYNLVHEFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHTVEDM 688
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ ++ + ++ C+C G NE L ++
Sbjct: 689 ESRGIVGSAALYYDLARCLCSAGRCNEGLNMV 720
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 48 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
+ VL + + D+ + L ++ D T+++ L K K ++AI I +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG--LKGVELNLHTYRIMLDGLVGKAE 165
K C + T ++ ALC G + +A GVM + G EL++ YR +L G +
Sbjct: 166 KFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSV--YRSLLFGWSVQRN 223
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK-------GLINEALELMKKIVAKSFAP 218
+ EA ++++M P F++++ C+C++ GL+ EAL +M ++ + P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 219 GARAWEALL 227
+ ++ LL
Sbjct: 284 TSMSYNILL 292
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVL------------SGIVAEGDYVKLDELFDEMLVLG 75
+A ++ MK GI PD+ C+ +L SG+V E + L EM
Sbjct: 226 EARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML-----EMRSYK 280
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P +YN+ ++ L + +V E+ QI++ M + GC P+ + ++ L G K
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM +G Y ++ L G + A L E+M + +D +I +
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Query: 196 CQKGLINEALELMKKIVA 213
C+ G + EL ++ ++
Sbjct: 401 CKGGNFEKGRELWEEALS 418
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +++ K ++ Y +L G + + + + +M G+ PD++ +N +
Sbjct: 192 ALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 251
Query: 89 GLCKQNK-------VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
LC++N V EA+ I+ M +P ++ N LL L + ++ ++++M
Sbjct: 252 CLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQM 311
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G + + +Y ++ L G+ + +++EM+++ F P + ++I +C +
Sbjct: 312 KRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERV 371
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
N AL+L +K+ S + ++ L+
Sbjct: 372 NFALQLFEKMKRSSVGGYGQVYDLLI 397
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P M + ++ L + R ++ IL QMK+ G PD Y V+ + G
Sbjct: 276 MRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGR 335
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K +++ DEM+ G P+ Y I LC +V+ A+Q+ + M + +
Sbjct: 336 FGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDL 395
Query: 121 LLGALCEAGDLSKAKGVMKE 140
L+ LC+ G+ K + + +E
Sbjct: 396 LIPKLCKGGNFEKGRELWEE 415
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F ++R + +A ++ M GI V +++++SG G+ K
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LF++M+ +G P++ TY I G VDEA ++ + G P++V CN ++
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
G +A+ V + + + + +T+ +L L
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSL 362
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ +T +I+ V +A +L++++ +G+ PD+V +++ G
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++F + L+PD YT+ ++ LC K D +I +G ++VT N
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG---IGTDFDLVTGNL 389
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL----VGKAEIGEASLLLEEM 176
L + G S A V+ M K L+ +TY + L L +A I ++++E
Sbjct: 390 LSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEK 449
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ S+ D++I + G N A+ L K+ + + +
Sbjct: 450 KHLDAHFHSAIIDSLI----ELGKYNTAVHLFKRCILEKY 485
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
KL G ++ + IRF R + I L+ G + D+V IVL ++ EG Y
Sbjct: 155 KLNVVNGALEIFEGIRF-----RNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 62 VKLDELFDEMLVL--------------------GLIPDVYTYNVYINGLCKQNKVDEAIQ 101
E F ++L L G+ V +++ ++G + + +A+
Sbjct: 210 PN-RERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVD 268
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+ + MI++GC PN+VT +L+ + G + +A V+ ++ +G+ ++ +M+
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
EA + + K+ P TF +I+ +C G
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
M + ++KE++ +DA + ++ ++ ++ G Y LF ++
Sbjct: 441 MYKIIIKEKKHLDAHF----------------HSAIIDSLIELGKYNTAVHLFKRCILEK 484
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
DV +Y V I GL + +++EA + M + G PN T T++ LC+ + K +
Sbjct: 485 YPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVR 544
Query: 136 GVMKEMGLKGVELNLHT 152
+++E +GVEL+ +T
Sbjct: 545 KILRECIQEGVELDPNT 561
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
D YTY VY++ LC+ AI++ +IK + + ++ +L E G + A +
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
K L+ L++ +Y + + GLV I EA L +M + YP T+ II +C++
Sbjct: 478 KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKE 537
Query: 199 GLINEALELMKKIVAK 214
+ +++++ + +
Sbjct: 538 KETEKVRKILRECIQE 553
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + +++ L + L +M++ G D + Y V+S V G
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+E++ EM+ + PDV Y V IN V +A+ V++M + G N V N+
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 121 LLGALCEAGDLSKAKGVMKEMGL---KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ + G L +A+ + +++ K +++T M++ ++ + +A + + M
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM- 709
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
K+ TF ++C + G EA ++ K++
Sbjct: 710 KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 29 ALYILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
A+ I K G + +V+ Y I+L + + + L+DEM+ G+ P TY I
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL---- 143
+ K A+ + M K+G +P+ VT +L +A + KA+ K+
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 144 --KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
V L+ +TY M+D +I EAS + ML++ P + TF+ +I G +
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 202 NEALELMKKIVAKSFAPGARAWEALL-LHSGSD 233
E LMK + AP R + L+ LH+ ++
Sbjct: 350 GEVTSLMKTMKLHC-APDTRTYNILISLHTKNN 381
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 7/210 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +I K + AL L +M + G++PD V IVL +
Sbjct: 213 MIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE 272
Query: 61 YVKLDELFDEMLVLGLIPD------VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ K +E F + D YTYN I+ K ++ EA + M++ G P
Sbjct: 273 FQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT 332
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
VT NT++ G L + +MK M L + TY I++ +I A +
Sbjct: 333 TVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAP-DTRTYNILISLHTKNNDIERAGAYFK 391
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
EM P ++ ++ + ++ EA
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV-VC-----YTIVLSG 54
M K+G P + +++ K A + D K D VC Y ++
Sbjct: 248 MSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDT 307
Query: 55 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
G + E F ML G++P T+N I+ ++ E ++ +M KL C P+
Sbjct: 308 YGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPD 366
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
T N L+ + D+ +A KEM G++ + +YR +L + + EA L+
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 175 EM 176
EM
Sbjct: 427 EM 428
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C + MI K + +A +M ++GI P V + ++ G ++
Sbjct: 295 CLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTS 354
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L M L PD TYN+ I+ K N ++ A M G KP+ V+ TLL A
Sbjct: 355 LMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS 413
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ +A+G++ EM VE++ +T + L + +AE+ E S + S
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYT-QSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE 472
Query: 187 TFDNIICCMCQKGLINEA 204
+ I ++G ++EA
Sbjct: 473 GYSANIDAYGERGYLSEA 490
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 80/175 (45%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
Q+ K V+ Y +++ K ELF+ M+ G+ PD TYN + L +
Sbjct: 498 QEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPH 557
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
+ ++ M + G + + ++ + + G L+ A+ V KEM +E ++ Y +++
Sbjct: 558 KGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ + +A +E M + S ++++I + G ++EA + +K++
Sbjct: 618 NAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 1/205 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
F + D++ +I KE D IL +M Q+GI PD++ T ++ G++ +
Sbjct: 379 SFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERA 438
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E F+ + GL PD Y I G K +++ M K + LL A
Sbjct: 439 TEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRA 498
Query: 125 LCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+ GD + A G+ M L+ Y + ++ ++ +A +EM K P
Sbjct: 499 YAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKP 558
Query: 184 RSSTFDNIICCMCQKGLINEALELM 208
N++ + +++AL L+
Sbjct: 559 DDKCIANLVRAYKGENSLDKALRLL 583
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 86/186 (46%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ ++M + GIKPD +T ++S G + E F++M G PD T I+
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYG 256
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ VD A+ + D + + VT +TL+ +G+ + +EM GV+ NL
Sbjct: 257 RAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLV 316
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y ++D + +A ++ ++++ F P ST+ ++ + ++AL + +++
Sbjct: 317 IYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREM 376
Query: 212 VAKSFA 217
K +
Sbjct: 377 KEKGLS 382
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 3/192 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + ++ + + + D V ++ ++ G+Y +++EM LG+ P++ YN I+
Sbjct: 264 ALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLID 323
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
+ + + +A I +I G PN T L+ A A A + +EM KG+ L
Sbjct: 324 SMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSL 383
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY--PRSSTFDNIICCMCQKGLINEALE 206
+ Y +L + EA + ++M K C P S TF ++I G ++EA
Sbjct: 384 TVILYNTLLSMCADNRYVDEAFEIFQDM-KNCETCDPDSWTFSSLITVYACSGRVSEAEA 442
Query: 207 LMKKIVAKSFAP 218
+ ++ F P
Sbjct: 443 ALLQMREAGFEP 454
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F DM+R K + ++ ++++ GI + Y V++ + LDEL
Sbjct: 627 PDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA---LPLDEL 683
Query: 68 ---FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F+EM+ G P+ T+NV ++ K K+ + + + + K +V++ NT++ A
Sbjct: 684 SGTFEEMIRYGFTPNTVTFNVLLDVYGKA-KLFKKVNELFLLAKRHGVVDVISYNTIIAA 742
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ D + +K M G ++L Y +LD ++ + +L+ M K P
Sbjct: 743 YGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPD 802
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I ++G I+E +++K++ P ++ L+
Sbjct: 803 HYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLI 845
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEE--RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M + GF P + F ++ K + + ++ L++L K+ G+ DV+ Y +++
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLL--AKRHGV-VDVISYNTIIAAYGKN 746
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
DY + M G + YN ++ K ++++ I+ M K P+ T
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N ++ E G + + V+KE+ G+ +L +Y ++ + EA L++EM
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALE 206
+ P T+ N++ + + EA++
Sbjct: 867 RNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
+ M+ DG + Y +L + K + M PD YTYN+ IN +
Sbjct: 756 IKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGE 815
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
Q +DE ++ + + G P++ + NTL+ A G + +A G++KEM + + + T
Sbjct: 816 QGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 153 YRIMLDGLVGKAEIGEA---SLLLEEM 176
Y ++ L E EA SL +++M
Sbjct: 876 YTNLVTALRRNDEFLEAIKWSLWMKQM 902
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
+M + G P+ V + ++L + K++ELF G++ DV +YN I K
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGK 745
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
+ +M G ++ NTLL A + + K + ++K M + +T
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
Y IM++ + I E + +L+E+ + P +++ +I G++ EA+ L+K++
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 213 AKSFAP 218
++ P
Sbjct: 866 GRNIIP 871
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVC---YTIVLSGIVA 57
M + G P V ++ K +A + + M++ GI VC Y+ +++
Sbjct: 236 MLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI----VCESAYSSMITIYTR 291
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
Y K +E+ D M + + + V +N +Q K++ A I+ SM G PN++
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIA 351
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTL+ + + A+G+ + G+E + +YR M++G G+A+ E + + L
Sbjct: 352 YNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW-GRADNYEEAKHYYQEL 410
Query: 178 KKCFYPRSS 186
K+C Y +S
Sbjct: 411 KRCGYKPNS 419
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 45/218 (20%)
Query: 39 DGI-KPDVVCYTIVLSGIVAEGDYVKLDELFDEM-----------LVLGLI--------- 77
DG+ + DVV +T V++G + GD + ELFD + +V G +
Sbjct: 70 DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAE 129
Query: 78 --------PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+V ++N I+G + ++D+A+++ D M + N+V+ N+++ AL + G
Sbjct: 130 MLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRG 185
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ +A + + M + V ++ M+DGL ++ EA L + M ++ +++
Sbjct: 186 RIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWN 237
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I Q I+EA +L + + + FA +W ++
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMI 271
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
++ + M++ LV+ R +A+ + +M + DVV +T ++ G+ G + LF
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
D M +I ++N I G + N++DEA D + ++ + + + NT++
Sbjct: 226 DCMPERNII----SWNAMITGYAQNNRIDEA----DQLFQVMPERDFASWNTMITGFIRN 277
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK-CFYPRSST 187
+++KA G+ M E N+ ++ M+ G V E EA + +ML+ P T
Sbjct: 278 REMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGT 333
Query: 188 FDNII-CCMCQKGLI 201
+ +I+ C GL+
Sbjct: 334 YVSILSACSDLAGLV 348
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
GD ++FD+M D+ +N ING + K +EA+ + M G KP+ T
Sbjct: 170 GDVASAYKVFDKMPE----KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+LL A + G L+ K V M G+ NLH+ ++LD + EA L +EM+
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMK 209
K S ++ ++I + G EA+EL K
Sbjct: 286 K----NSVSWTSLIVGLAVNGFGKEAIELFK 312
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
MI KEE+ AL I M + G+KP++V +++ + G + +++ + LG
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG--CKPNVVTCNTLLGALCEAGDLSK 133
PD YT+N + L K N+ ++ +Q+ D MI+ C N NT + + + G K
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFD-MIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A ++ EM G+ ++ +Y +++ + A L+ E M ++ P + T+ +++
Sbjct: 409 AVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 194 CMCQKGLINEALELMKKI 211
L +E +++KK+
Sbjct: 469 SCIWGSLWDEVEDILKKV 486
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T + + L + +KV A+++ DSM LG +PN CN+ L L GD+ KA V + M
Sbjct: 109 TLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM 168
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
K + HTY +ML + A + E+ ++ R S FD + L
Sbjct: 169 R-KKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREP--KRRSCFDVV--------LY 217
Query: 202 NEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYS 237
N A+ L +I + R W + H G+++TYS
Sbjct: 218 NTAISLCGRI--NNVYETERIWRVMKGDGHIGTEITYS 253
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G+ V + L KE+ +A ++ ++K+ IKPD + Y ++ G GD
Sbjct: 172 MNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE-FIKPDEITYRTMIQGFCDVGD 230
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI-KLGCKPNVVTCN 119
++ +L++ M+ G D+ + L K+N+ DEA ++ M+ K G +
Sbjct: 231 LIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYR 290
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ LC+ G + A+ V EM +GV ++ T+ ++ GL+ K + EA L+E +
Sbjct: 291 VMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN- 349
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S + +I + + +EA E+ +K++ + P + LL
Sbjct: 350 ---PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLL 394
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 20 LVKEERGMDALYILNQ-MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
++ R MD + L Q + + G+ D + IVL + + + K F M G +
Sbjct: 121 IIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKKCVNYFHLMNGFGYLY 179
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
+V T N + LCK+ V+EA + V +K KP+ +T T++ C+ GDL +A +
Sbjct: 180 NVETMNRGVETLCKEKLVEEA-KFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN-----IIC 193
M +G ++++ + +++ L+ K + EAS + M+ K R D +I
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSK----RGGDLDGGFYRVMID 294
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+ G I+ A ++ ++ + W +L+
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLI 328
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
GD ++FD+M D+ +N ING + K +EA+ + M G KP+ T
Sbjct: 37 GDVASAYKVFDKMPE----KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+LL A + G L+ K V M G+ NLH+ ++LD + EA L +EM+
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMK 209
K S ++ ++I + G EA+EL K
Sbjct: 153 K----NSVSWTSLIVGLAVNGFGKEAIELFK 179
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 10/220 (4%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ + MI LV ER +A+ + + M+ GIKPD T VLS + G + +
Sbjct: 271 VSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHE 330
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+L G+ D + ++ K ++ A++I + + NV T N LLG L G
Sbjct: 331 YILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS----KNVFTWNALLGGLAIHG 386
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF--YPRSST 187
++ +EM G + NL T+ L+ + E +M + + +P+
Sbjct: 387 HGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEH 446
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C+ GL++EALEL+K + K P R A+L
Sbjct: 447 YGCMIDLLCRAGLLDEALELVKAMPVK---PDVRICGAIL 483
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
PD V +T ++SG + G+ + +F +M ++G++PD +T +++ QI
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
+ +KL C + +L+ + G + A + K + + +N+ + ML GL
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM----MNITAWNAMLVGLAQ 696
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
E E L ++M P TF ++ GL++EA + M+ +
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPD----------VVCYTIVLSGIVA 57
P + +T MI ++ A ++ +QM+ G+ PD C T + G
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 58 EGDYVKLD---------ELFDEMLVLGLIPDVY------------TYNVYINGLCKQNKV 96
+ +KL+ L D G I D Y +N + GL + +
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRI 155
E +Q+ M LG KP+ VT +L A +G +S+A M+ M G G++ + Y
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760
Query: 156 MLDGLVGKAEIGEASLLLEEM 176
+ D L + +A L+E M
Sbjct: 761 LADALGRAGLVKQAENLIESM 781
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G+K ++V + ++ V D+ +LD + M ++ D+ +Y V I+G KV+EA
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
++V M + N ++ G + K + EM +GV N TY ++++G
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNG 360
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L ++ EA L E+ F + + + G+I+++LE++ +++ F PG
Sbjct: 361 LCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPG 420
Query: 220 ARAWEAL 226
A E L
Sbjct: 421 ATICERL 427
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL-DELFDEM 71
F MI + + + + MK + +K D T+ L + D ++L + F M
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNL-KRCDQMELARDFFSLM 200
Query: 72 LVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCNTLLGALCEAG 129
+ G+ + VY+ V + LC ++ A ++V+ M + G K N+VT +++G +
Sbjct: 201 VESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRW 260
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
D + V+K M + V L+L +Y++++DG ++ EA L+ M K S ++
Sbjct: 261 DFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
I+ + GL+ + +EL ++ ++ P + L+
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLM 358
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G ++ F MI VK + +L M+++ + D+ Y +++ G + G +
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ L M L + Y YN+ +NG + V++ I++ M G PN T L+
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNG 360
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+AG + +A + E+ + E++ Y + + I ++ ++ EM++ F P
Sbjct: 361 LCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DAL + ++M K D + +++ G + G Y++ + + M+ G+ D +TY I
Sbjct: 82 DALQLFDEMN----KADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVI 137
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ + ++E +I +IKLG +V CN+L+ + G A+ V +EM E
Sbjct: 138 KSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP----E 193
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP-RSSTFDNIICC 194
++ ++ M+ G + + + +L +EMLK F P R ST + C
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 109/292 (37%), Gaps = 62/292 (21%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG-----I 55
M G V +T MI L+ AL + +M G+ P+ V +S +
Sbjct: 308 METFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 56 VAEGD------------------------YVKLDELFDEMLVLGLIP--DVYTYNVYING 89
+ +G Y K +L D V + DVYT+N I G
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 427
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG-VEL 148
C+ +A ++ M +PN++T NT++ + GD +A + + M G V+
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF----------------DNII 192
N T+ +++ G + + EA L +M F P S T I
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGL 244
C+ ++ L +A+ +K + ++A D+ YS T F G+
Sbjct: 548 GCVLRRNL--DAIHAVKNALTDTYAKSG------------DIEYSRTIFLGM 585
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 93/236 (39%), Gaps = 33/236 (13%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ MI +E R + + M +DG+ PD + +L G GD + ++
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI 208
Query: 73 VLGLIP-------------------------------DVYTYNVYINGLCKQNKVDEAIQ 101
LG+ DV +N + C+ K +EA++
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+V M K G P +VT N L+G + G A +M++M G+ ++ T+ M+ GL+
Sbjct: 269 LVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLI 328
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTF-DNIICCMCQKGLINEALELMKKIVAKSF 216
+A + +M P + T + C C K +IN+ E+ V F
Sbjct: 329 HNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK-VINQGSEVHSIAVKMGF 383
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 67/260 (25%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ ++ +M+++GI P +V + I++ G G +L +M G+ DV+T+ I
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC----------------------------- 118
+GL +A+ + M G PN VT
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 119 ------NTLLGALCEAGDLSKAKGVMKEMGLKGV-------------------------- 146
N+L+ + G L A+ V + K V
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Query: 147 -ELNLH----TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR-SSTFDNIICCMCQKGL 200
+ NL T+ M+ G + + GEA L + M K R ++T++ II Q G
Sbjct: 445 QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 201 INEALELMKKIVAKSFAPGA 220
+EALEL +K+ F P +
Sbjct: 505 KDEALELFRKMQFSRFMPNS 524
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA + + M++ ++ ++ ++ E + ++ +LF M+ G++PD + + +
Sbjct: 133 DARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKIL 188
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G V+ I +IKLG + N++L + G+L A + M E
Sbjct: 189 QGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM----RE 244
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ + +L + EA L++EM K+ P T++ +I Q G + A++L
Sbjct: 245 RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Query: 208 MKKIVAKSFAPGARAWEAL---LLHSG 231
M+K+ W A+ L+H+G
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNG 331
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
+T ++ + R A +L +MK +PDV Y+I++ + + K+ +L +M
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL----GCKPNVVTCNTLLGALCE 127
G+ P+ TYN I+ K +++ ++I++ CKP+ T N+ L A
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMF---VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 304
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + + ++ G+E N+ T+ I+LD + S ++E M K + T
Sbjct: 305 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 364
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
++ +I + G + + L + + ++ P
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPS 396
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 42 KPDVVCYT--IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
KP+V Y IV+ G + + K ELF EM+ G + + Y ++ + + D A
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPE--KAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAA 204
Query: 100 IQIVDSM-IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
+++ M C+P+V T + L+ + + K + ++ +M +G+ N TY ++D
Sbjct: 205 FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID 264
Query: 159 GLVGKAE--IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
GKA+ + S L++ + + P S T ++ + G I +K +
Sbjct: 265 AY-GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI 323
Query: 217 APGARAWEALLLHSGSDLTYSE 238
P R + LL G Y +
Sbjct: 324 EPNIRTFNILLDSYGKSGNYKK 345
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 8 PGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
P + + I F E R +D L IL +MK+ KPDV+ Y VL + G
Sbjct: 174 PYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAG------- 226
Query: 67 LFDEML-VLGLIPD-------VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
L +E+L VL + + + TYN +NG+ K + D + I + M++ G +P++++
Sbjct: 227 LVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSY 286
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
++ +L +G++ ++ + EM + + +++ YR ++D L + A L +E+
Sbjct: 287 TAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 47 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
CY + + D L L E+ L + N I + ++D+ + I+ M
Sbjct: 144 CYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEM 203
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK-GVELNLHTYRIMLDGLVGKAE 165
+ CKP+V+T N++L L AG +++ GV+ M V +N+ TY +L+G+
Sbjct: 204 KEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACR 263
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
++ EM++ P ++ +I + + G + E+L L ++ + P + A
Sbjct: 264 FDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRA 323
Query: 226 LL 227
L+
Sbjct: 324 LI 325
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP--NVVTCNTLLGALCEAGDLSKAK 135
PDV TYN ++ L + V+E + ++ +M K C N++T NT+L + +A
Sbjct: 210 PDVITYNSVLDILGRAGLVNEILGVLSTM-KEDCSVSVNIITYNTVLNGMRKACRFDMCL 268
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ EM G+E +L +Y ++D L + E+ L +EM ++ P + +I C+
Sbjct: 269 VIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCL 328
Query: 196 CQKGLINEALEL 207
+ G AL+L
Sbjct: 329 KKSGDFQSALQL 340
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
++ F +K +R A + ++M + DV+ + +++G V+ G K +F +MLV
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTE----RDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCNTLLGALCEAGDLS 132
G+ D+ T V + C +++ + V S+ +K CNTLL + GDL
Sbjct: 290 SGIEIDLATI-VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
AK V +EM + V +Y M+ G + GEA L EEM ++ P T ++
Sbjct: 349 SAKAVFREMSDRSVV----SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 193 CCMCQKGLINEALELMKKI 211
C + L++E + + I
Sbjct: 405 NCCARYRLLDEGKRVHEWI 423
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 45 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 104
VV YT +++G EG + +LF+EM G+ PDVYT +N + +DE ++ +
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 105 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
+ + ++ N L+ + G + +A+ V EM +K ++ ++ ++ G
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTIIGGYSKNC 477
Query: 165 EIGEA----SLLLEEMLKKCFYPRSST 187
EA +LLLEE K F P T
Sbjct: 478 YANEALSLFNLLLEE---KRFSPDERT 501
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ-DGIKPDVVCYTIVLSGIVAEGDYVK 63
G P + +T +I K E A L MK KPDV +T+++S G +
Sbjct: 174 GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDL 233
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLL 122
+ + EM LG+ TYN I+G K +E ++ MI+ G P+V T N+++
Sbjct: 234 VKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII 293
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
G+ ++ K + L GV+ ++ T+ I++ GKA + + + + ++K F+
Sbjct: 294 GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF-GKAGMYKKMCSVMDFMEKRFF 352
Query: 183 PRSS-TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ T++ +I + G I + ++ +K+ + P + + +L+
Sbjct: 353 SLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLV 398
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 21 VKEERGMDALYILNQM-KQDGIKPDVVCYTIVLS--GIVAEGDYVKLDELFDEMLVLGLI 77
+KE R AL I N + KQ +P YT + G + D L LF+ ML GL
Sbjct: 119 IKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASL--LFEVMLSEGLK 176
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKG 136
P + Y I+ K +D+A ++ M + CKP+V T L+ C+ G K
Sbjct: 177 PTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 236
Query: 137 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 168
++ EM GV + TY ++DG GKA + E
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGY-GKAGMFE 267
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
R M++ Y Q+ G++PD+ + I++ G Y K+ + D M TYN
Sbjct: 303 RKMESWYSRFQLM--GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYN 360
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ I K ++++ + M G KPN +T +L+ A +AG + K V++++
Sbjct: 361 IVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNS 420
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
V L+ + +++ ++ L +M ++ P TF +I G+ +
Sbjct: 421 DVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAV 480
Query: 205 LELMKKIVA 213
EL K++++
Sbjct: 481 QELEKQMIS 489
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A IL K GI+ + Y+ ++ D+ K EL++++ + L P + T N I
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
LC+ N++ +A++ +D + LG KPN +T + L+ A D + ++ + GV
Sbjct: 757 TALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVS 816
Query: 148 LNL 150
NL
Sbjct: 817 PNL 819
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 6/206 (2%)
Query: 29 ALYILNQMKQDG--IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL--IPDVYTYN 84
A +L +MK + I PD + ++ G + E++ + G+ P+VYT
Sbjct: 591 AFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT-- 648
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ +N K D A I M + P+ V + L+ A L +A G++++ +
Sbjct: 649 IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ 708
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ L +Y ++ + +A L E++ P ST + +I +C+ + +A
Sbjct: 709 GIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKA 768
Query: 205 LELMKKIVAKSFAPGARAWEALLLHS 230
+E + +I P + L+L S
Sbjct: 769 MEYLDEIKTLGLKPNTITYSMLMLAS 794
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
L +M ++ V + ++SG V + LF M+ +G+ PD +TY ++
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
QI +IK + +V C+TL+ + GDL ++ + + K + + T
Sbjct: 616 LASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE----KSLRRDFVT 671
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE---LMK 209
+ M+ G + EA L E M+ + P TF +I+ GLI++ LE +MK
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731
Query: 210 K 210
+
Sbjct: 732 R 732
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ +T M+ L + R DA+ + ++M + +VV + +++G++ GD K ++FD
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M DV ++N I G + + ++EA + M + NVVT +++ C G
Sbjct: 194 AMPS----RDVVSWNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYG 245
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
D+ +A + EM E N+ ++ M+ G EA +L EM K
Sbjct: 246 DVREAYRLFCEM----PERNIVSWTAMISGFAWNELYREALMLFLEMKK 290
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 27 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG-------------------------DY 61
+ A ++L+++ Q G VV +T +LS G Y
Sbjct: 59 VHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGY 118
Query: 62 VKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
VK + + + +P +V ++ V + LC + ++A+++ D M + NVV+ NT
Sbjct: 119 VKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE----RNVVSWNT 174
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L GD+ KAK V M + V ++ M+ G + + EA LL +M +K
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMPSRDVV----SWNAMIKGYIENDGMEEAKLLFGDMSEKN 230
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELM-----KKIVAKSFAPGARAW-----EALLL 228
T+ +++ C+ G + EA L + IV+ + AW EAL+L
Sbjct: 231 VV----TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
D V +T+++SG+V + + L +M+ GL P TY+V ++ + +D+ I
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 489
Query: 104 DSMIKLGC--KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+ K P+++ N+L+ + G + A + +M V+ + ++ M+ GL
Sbjct: 490 CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLS 545
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPG 219
+A L +EML P S TF ++ GLI LEL K + S PG
Sbjct: 546 HHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+ D V Y ++SG +A G + LF EM +GL T+N I+GL + N +E I
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL----STWNAMISGLMQNNHHEEVIN 352
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
MI+ G +PN VT ++LL +L + +L K + G + N++ ++D
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+P+++ + + G D V +L+ M+ LGL+P+ YT+ + K E Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
I ++KLGC ++ +L+ + G L A V K ++ +Y ++ G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD----KSPHRDVVSYTALIKGYA 211
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ I A L +E+ K +++ +I + G EALEL K ++ + P
Sbjct: 212 SRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 12/205 (5%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
T +I V+ R DA + ++ DVV YT ++ G + G +LFDE+ V
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
DV ++N I+G + EA+++ M+K +P+ T T++ A ++G +
Sbjct: 229 ----KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
+ V + G NL ++D E+ A L E + Y +++ +I
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----YKDVISWNTLIG 340
Query: 194 CMCQKGLINEALELMKKIVAKSFAP 218
L EAL L ++++ P
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETP 365
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K + + ++ + + + R + + MK DG++P I S +V
Sbjct: 34 KRNYANDLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTA---DIFHSFVVGTMKGA 90
Query: 63 KLDELF---DEMLVLGLIPDVYTYNVYIN--GLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+L + F +EM +G+ PDV YN I+ G CK K EAI++ D M + KPN T
Sbjct: 91 RLSDAFFFREEMKAMGIAPDVNLYNFLISTCGKCKNGK--EAIRVYDEMKRYDVKPNGQT 148
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
LL A +G L ++++M GV LN Y
Sbjct: 149 FVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCY 184
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
+MIR L K E N + Y IVL ++ + + +F M
Sbjct: 531 NEMIRHLQKAE---------NLSAHSNMYLGTPTYNIVLHSLLEANETDMVINIFKRMKS 581
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
G DV TYN+ I+ + A +V MI+ G P VT L+ L + +
Sbjct: 582 CGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALMKILLNDANFEE 641
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A ++ + L+ + L++ +Y +L K I ++E+M ++ P +T +
Sbjct: 642 ALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKVNPDPTTCHYVFS 701
Query: 194 CMCQKGLINEALELM 208
C +KG A+E +
Sbjct: 702 CYVEKGYHATAIEAL 716
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
+MIR L K E N + Y IVL ++ + + +F M
Sbjct: 503 NEMIRHLQKAE---------NLSAHSNMYLGTPTYNIVLHSLLEANETDMVINIFKRMKS 553
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
G DV TYN+ I+ + A +V MI+ G P VT L+ L + +
Sbjct: 554 CGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALMKILLNDANFEE 613
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A ++ + L+ + L++ +Y +L K I ++E+M ++ P +T +
Sbjct: 614 ALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKVNPDPTTCHYVFS 673
Query: 194 CMCQKGLINEALELM 208
C +KG A+E +
Sbjct: 674 CYVEKGYHATAIEAL 688
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 58.2 bits (139), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKG 136
P V+T N I + + + E+I + K PNVV+ N ++ A C+ G++ +A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 137 VMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V + + + TYR + GLV IG+A+ LL EML K S+ ++N+I
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 196 CQKGLINEALELMKKIVAK 214
G ++A+E ++ +K
Sbjct: 298 LDLGDFDKAVEFFDELKSK 316
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI-KLGCKPNVVTCNTLLGALCEAGDLSKA 134
++P+V +YN IN C + VDEA+++ ++ P+ VT L L +AG + A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+++EM KG + Y ++ G + + +A +E+ KC + +D I+
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKC-----TVYDGIVNA 326
Query: 195 M-----CQKGLINEALELMKKIVAKSF 216
+KG EA+E + ++ K F
Sbjct: 327 TFMEYWFEKGNDKEAMESYRSLLDKKF 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 12/229 (5%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + + + + LV+ R DA +L +M G D Y ++ G + GD+ K
Sbjct: 248 FAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAV 307
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
E FDE+ + D ++ ++ EA++ S++ + + T N LL
Sbjct: 308 EFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVF 367
Query: 126 CEAGDLSKAKGVMKEM-----GLKGVELNLHTYRIMLDGLVGKAEIGEA----SLLLEEM 176
+ G +A + EM + +N T IM++ E EA + ++
Sbjct: 368 LKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKV 427
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF---APGARA 222
K F + NI+ C++G++ EA + V++S AP RA
Sbjct: 428 TSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRA 476
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 39/237 (16%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +IR + + A ++ ++M++ G+ D Y +L + + +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 68 FDEMLVLGLIPDVYTYNVYIN--GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ + LGL D+Y N I+ C V +A+++ + M + + V+ N++LG L
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKM----SERDTVSWNSMLGGL 195
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+AG+L A+ + EM + +L ++ MLDG E+ +A L E+M ++ S
Sbjct: 196 VKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWS 251
Query: 186 S-----------------------------TFDNIICCMCQKGLINEALELMKKIVA 213
+ T+ II +KGL+ EA L+ ++VA
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + +M + D V + +L G+V G+ LFDEM LI ++N +
Sbjct: 172 DAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI----SWNTML 223
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G + ++ +A ++ + M + N V+ +T++ +AGD+ A+ + +M L
Sbjct: 224 DGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK- 278
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ T+ I++ G K + EA L+++M+ ++ +I+ + GL++ + +
Sbjct: 279 -NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ + A ALL
Sbjct: 338 HSILKRSNLGSNAYVLNALL 357
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL-----SGIVAEGDYVKL 64
++ + M+ L G +A+ + ++M+++GI+PD V + VL +G++ EG +
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG----I 436
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D + V L+P V Y ++ L + ++ EAI++V +M +PNVV LLGA
Sbjct: 437 DYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGA 493
Query: 125 LCEAGDLSKAKGVMKEM 141
++ AK V+ +
Sbjct: 494 CRMHNEVDIAKEVLDNL 510
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
+VV +TI+++G +G + D L D+M+ GL D + + + ++I
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
+ + N N LL + G+L KA V ++ K +L ++ ML GL
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVH 394
Query: 164 AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
EA L M ++ P TF ++C GLI+E ++
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID 437
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 50 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
++ SG +AE ++F+++ + T+N I+G K+ ++++A ++ D M
Sbjct: 50 MIRSGYIAEAR-----DIFEKLEARNTV----TWNTMISGYVKRREMNQARKLFDVM--- 97
Query: 110 GCKPNVVTCNTLLGALCEAGD---LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
K +VVT NT++ G L +A+ + EM + + ++ M+ G I
Sbjct: 98 -PKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRI 152
Query: 167 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
GEA LL E+M ++ + ++ +I CQ G ++ A+ L +K+ K +P
Sbjct: 153 GEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 20 LVKEERGMDALYILNQMKQDGIK---PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 76
L+ G+ L + QM Q +K PDV + +++ G+ ++ +FDEM L
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM---KL 471
Query: 77 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 136
+V T+N I G EA+ + SM G P+ +T ++L A AG + +AK
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 137 -VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII-CC 194
+ M + +E + Y +++ G+ + EA ++ M F P + + ++ C
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM---PFEPDKTVWGALLDAC 588
Query: 195 MCQK--GLINEALELMKKIVAKSFAP 218
GL + A E M ++ +S P
Sbjct: 589 RIYNNVGLAHVAAEAMSRLEPESSTP 614
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 73 VLGLIP--DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
V ++P DV +YN I G + ++A+++V M KP+ T +++L E D
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ K K + + KG++ +++ ++D A I ++ E + + + ++++
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS----ERVFSRLYCRDGISWNS 313
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ Q G NEAL L +++V PGA A+ +++
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 22/188 (11%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +T MI + R +DAL + ++M DVV + ++SG V GD +L
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMISGCVECGDMNTAVKL 119
Query: 68 FDEMLVLGLIPD--VYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCNTLLGA 124
FDEM P+ V ++ +NG + KVD+A ++ M +K + N+++
Sbjct: 120 FDEM------PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHG 168
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G + A + K+M K N+ ++ M+ GL GEA L + ML+ C
Sbjct: 169 YLQFGKVDDALKLFKQMPGK----NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKST 224
Query: 185 SSTFDNII 192
S F +I
Sbjct: 225 SRPFTCVI 232
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
LF E G P T ++ +N L + K EA I + ++ + + V NTL+ A+
Sbjct: 726 LFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAML 785
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
EAG L A + + M GV ++ TY M+ ++ +A + + Y
Sbjct: 786 EAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEK 845
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ N+I + G ++EAL L ++ K PG ++ ++
Sbjct: 846 IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Query: 61 YVKLDELFDEM-LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ++ + F M L L P V Y + + + K+ A + M+++GC+P+ V C
Sbjct: 168 WRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
T+L G S K + + + L+ Y ML L K+ G+ L EM+++
Sbjct: 228 TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P T+ ++ ++G EAL+ ++ + F P
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVP 326
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 61/110 (55%)
Query: 48 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
Y +LS + + + K+ +L+ EM+ G+ P+ +TY + ++ KQ +EA++ M
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
LG P VT ++++ +AGD KA G+ ++M +G+ + +T ML
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M ++G+ P+ YT+V+S +G + + F EM LG +P+ TY+ I+ K
Sbjct: 283 EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
++AI + + M G P+ TC T+L + + KA + +M
Sbjct: 343 DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 7 CPGVMDFTDMIRFLV------KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
C M D+I + V K G ++ I +M + I+PD VCY VLS G
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 61 YVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +ELF ++L G+ P V Y ++ L + ++ EA ++D+M KPNV
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM---PIKPNVGIWQ 486
Query: 120 TLLGALCEA-GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
TLL +LC GD+ K V K + L+ N Y +M+ L G+A
Sbjct: 487 TLL-SLCRVHGDIELGKEVGKIL-LRIDAKNPANY-VMMSNLYGQA 529