Miyakogusa Predicted Gene

Lj0g3v0040249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0040249.1 Non Chatacterized Hit- tr|I3T1G7|I3T1G7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.09,0,ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN (SNAP-ALPHA),NULL;
SOLUBLE NSF ATTACHMENT PROTEIN (SNAP),NSF at,CUFF.1851.1
         (230 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56190.1 | Symbols: ALPHA-SNAP2, ASNAP | alpha-soluble NSF at...   310   5e-85
AT3G56190.2 | Symbols: ALPHA-SNAP2, ASNAP | alpha-soluble NSF at...   232   1e-61
AT3G56450.1 | Symbols: ALPHA-SNAP1 | alpha-soluble NSF attachmen...   181   5e-46

>AT3G56190.1 | Symbols: ALPHA-SNAP2, ASNAP | alpha-soluble NSF
           attachment protein 2 | chr3:20846119-20848356 REVERSE
           LENGTH=289
          Length = 289

 Score =  310 bits (794), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 154/220 (70%), Positives = 181/220 (82%)

Query: 1   MADQLSXXXXXXXXXXXXLNGWGLFGSKYEDASDLFDKAANSFKLAKSWDKAGSTYLRLA 60
           M D L             LNGWG+FGSKYEDA+DL +KAANS+KLAKSWD+AG  YL+LA
Sbjct: 1   MGDHLVRAEEFEKKAEKKLNGWGIFGSKYEDAADLLEKAANSYKLAKSWDQAGKAYLKLA 60

Query: 61  SCHLKLESKHEAAQAYVDAAHCYKKTNIKEAVSCLDHAVNIFCDIGRLSMAARYLKEIAE 120
            CHLK +SKH+AA AY +AA CYKK +  EA SCL+ AVNIFC+IGRL+MAARY KEIAE
Sbjct: 61  DCHLKSDSKHDAANAYAEAAKCYKKVDTNEAASCLERAVNIFCEIGRLNMAARYYKEIAE 120

Query: 121 LHESEQNIEQAVVYFEKAADFFQNEEVTTSANQCKQKVAQFAAQLEQYQKSIEIYEEIAR 180
            +ES+Q  EQA+ YFEKAA+FFQNEEVTTSANQC  KVAQ+AAQLEQY+K+I+IYE+IAR
Sbjct: 121 YYESDQKFEQAIAYFEKAAEFFQNEEVTTSANQCNLKVAQYAAQLEQYEKAIKIYEDIAR 180

Query: 181 QSLSNNLLKYGVKGHLLNAGICQLCKGDVVAISNALERYQ 220
            SL+NNLLKYGVKGHLL AG+C LCK DVV+I+NALE+YQ
Sbjct: 181 HSLNNNLLKYGVKGHLLTAGMCHLCKADVVSITNALEKYQ 220


>AT3G56190.2 | Symbols: ALPHA-SNAP2, ASNAP | alpha-soluble NSF
           attachment protein 2 | chr3:20846119-20848213 REVERSE
           LENGTH=240
          Length = 240

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/170 (70%), Positives = 145/170 (85%), Gaps = 2/170 (1%)

Query: 53  GSTYLRLA-SCHLKL-ESKHEAAQAYVDAAHCYKKTNIKEAVSCLDHAVNIFCDIGRLSM 110
           GS++  L+ +C L L +SKH+AA AY +AA CYKK +  EA SCL+ AVNIFC+IGRL+M
Sbjct: 2   GSSWKSLSKTCRLSLKDSKHDAANAYAEAAKCYKKVDTNEAASCLERAVNIFCEIGRLNM 61

Query: 111 AARYLKEIAELHESEQNIEQAVVYFEKAADFFQNEEVTTSANQCKQKVAQFAAQLEQYQK 170
           AARY KEIAE +ES+Q  EQA+ YFEKAA+FFQNEEVTTSANQC  KVAQ+AAQLEQY+K
Sbjct: 62  AARYYKEIAEYYESDQKFEQAIAYFEKAAEFFQNEEVTTSANQCNLKVAQYAAQLEQYEK 121

Query: 171 SIEIYEEIARQSLSNNLLKYGVKGHLLNAGICQLCKGDVVAISNALERYQ 220
           +I+IYE+IAR SL+NNLLKYGVKGHLL AG+C LCK DVV+I+NALE+YQ
Sbjct: 122 AIKIYEDIARHSLNNNLLKYGVKGHLLTAGMCHLCKADVVSITNALEKYQ 171


>AT3G56450.1 | Symbols: ALPHA-SNAP1 | alpha-soluble NSF attachment
           protein 1 | chr3:20930557-20932869 FORWARD LENGTH=381
          Length = 381

 Score =  181 bits (458), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/202 (50%), Positives = 129/202 (63%), Gaps = 37/202 (18%)

Query: 19  LNGWGLFGSKYEDASDLFDKAANSFKLAKSWDKAGSTYLRLASCHLKLESKHEAAQAYVD 78
           LN    F +KYEDA+DL +KA +S+KLAKSWD+AG  YL+LA CHLK  S          
Sbjct: 107 LNRRRRFDTKYEDAADLLEKARDSYKLAKSWDQAGIAYLKLADCHLKANS---------- 156

Query: 79  AAHCYKKTNIKEAVSCLDHAVNIFCDIGRLSMAARYLKEIAELHESEQNIEQAVVYFEKA 138
            A+ Y   +      C+DH                   EIAE +ES++  EQA+ Y+E A
Sbjct: 157 LANTYMIMD-----ECMDH-------------------EIAEYYESDEMFEQAIAYYETA 192

Query: 139 ADFFQNEEVTTSANQCKQKVAQFAAQLEQYQKSIEIYEEIARQSLSNNLLKYGVKGHLLN 198
           A+FFQ EEVTTSANQC  KVAQ+A+QLEQ  + ++     AR SL+N LLKYGVKGHLL 
Sbjct: 193 AEFFQIEEVTTSANQCNLKVAQYASQLEQQSRFMKTQ---ARHSLNNKLLKYGVKGHLLT 249

Query: 199 AGICQLCKGDVVAISNALERYQ 220
           AG+C LCK DVV+I+NALE+YQ
Sbjct: 250 AGMCHLCKADVVSITNALEKYQ 271