Miyakogusa Predicted Gene
- Lj0g3v0039969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0039969.1 Non Chatacterized Hit- tr|I1L5K1|I1L5K1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2929
PE=,63.09,0,SEC31,NULL; SEC31-RELATED PROTEIN,NULL; no
description,WD40/YVTN repeat-like-containing domain; WD_R,CUFF.1820.1
(425 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63460.2 | Symbols: | transducin family protein / WD-40 repe... 388 e-108
AT3G63460.1 | Symbols: | transducin family protein / WD-40 repe... 388 e-108
AT3G63460.3 | Symbols: | transducin family protein / WD-40 repe... 387 e-108
AT1G18830.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 340 9e-94
AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | Transducin fam... 75 9e-14
AT1G53090.2 | Symbols: SPA4 | SPA1-related 4 | chr1:19783748-197... 71 1e-12
AT1G53090.1 | Symbols: SPA4 | SPA1-related 4 | chr1:19783748-197... 71 1e-12
AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | Tran... 71 2e-12
AT4G35050.1 | Symbols: MSI3, NFC3 | Transducin family protein / ... 70 3e-12
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 65 7e-11
AT1G12910.1 | Symbols: ATAN11, LWD1 | Transducin/WD40 repeat-lik... 64 3e-10
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 59 6e-09
AT3G26640.1 | Symbols: LWD2 | Transducin/WD40 repeat-like superf... 59 7e-09
AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40 rep... 58 1e-08
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 2e-08
AT2G19540.1 | Symbols: | Transducin family protein / WD-40 repe... 56 5e-08
AT3G15354.1 | Symbols: SPA3 | SPA1-related 3 | chr3:5169327-5172... 56 5e-08
AT5G24520.2 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like s... 54 2e-07
AT5G24520.3 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like s... 54 2e-07
AT5G24520.1 | Symbols: TTG1, TTG, URM23, ATTTG1 | Transducin/WD4... 54 2e-07
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 54 2e-07
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:1949942... 54 3e-07
AT3G27640.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 4e-07
AT4G11110.1 | Symbols: SPA2 | SPA1-related 2 | chr4:6772163-6776... 53 4e-07
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 52 6e-07
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 52 1e-06
AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 52 1e-06
AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 52 1e-06
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 2e-06
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 2e-06
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 3e-06
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 3e-06
AT4G18900.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 4e-06
AT1G76260.1 | Symbols: DWA2 | DWD (DDB1-binding WD40 protein) hy... 49 5e-06
AT5G08560.2 | Symbols: | transducin family protein / WD-40 repe... 49 5e-06
AT5G08560.1 | Symbols: | transducin family protein / WD-40 repe... 49 5e-06
>AT3G63460.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1102
Length = 1102
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/348 (57%), Positives = 243/348 (69%), Gaps = 29/348 (8%)
Query: 1 MELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLDLSSDDRELPLVES 60
M K V RS VAL+PD ++AAGTMAG VD +FS S LEIF+LD SDDR+LPLV
Sbjct: 1 MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRDLPLVGE 60
Query: 61 YRSPHRFSRLSWGKNDSVSK--SRGLVAGGLFDGEIHLW----------SENQSATVLVR 108
S RF+RL+WG+N S S+ + GL+AGGL DG I LW SEN L
Sbjct: 61 IPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVGHLSV 120
Query: 109 HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD--------SASQGEISFLSW 160
HKGPVRGLEF+ NLLASGA+DG+ICIWDL EP SA+QGEISF+SW
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW 180
Query: 161 NSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDS 220
N +VQ ILASTSY+GT V+WD + K +I+FADSVRRRCS+LQWNP++ TQ+++AS+DDS
Sbjct: 181 NRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDS 240
Query: 221 P--LRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGG 278
L+LWD+R M+P+ EF GH RGVI M WCP+D + LLTC KD+RTICW+T + E
Sbjct: 241 SPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAE--- 297
Query: 279 QIAYELPTGTRWNFDVHWCPETPGVISASSFDGRIDGVISV--CSFEG 324
I ELP G WNFDVHW P+ PGVISASSFDG+I G+ ++ CS G
Sbjct: 298 -IVAELPAGNNWNFDVHWYPKIPGVISASSFDGKI-GIYNIEGCSRYG 343
>AT3G63460.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1104
Length = 1104
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/348 (57%), Positives = 243/348 (69%), Gaps = 29/348 (8%)
Query: 1 MELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLDLSSDDRELPLVES 60
M K V RS VAL+PD ++AAGTMAG VD +FS S LEIF+LD SDDR+LPLV
Sbjct: 1 MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRDLPLVGE 60
Query: 61 YRSPHRFSRLSWGKNDSVSK--SRGLVAGGLFDGEIHLW----------SENQSATVLVR 108
S RF+RL+WG+N S S+ + GL+AGGL DG I LW SEN L
Sbjct: 61 IPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVGHLSV 120
Query: 109 HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD--------SASQGEISFLSW 160
HKGPVRGLEF+ NLLASGA+DG+ICIWDL EP SA+QGEISF+SW
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW 180
Query: 161 NSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDS 220
N +VQ ILASTSY+GT V+WD + K +I+FADSVRRRCS+LQWNP++ TQ+++AS+DDS
Sbjct: 181 NRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDS 240
Query: 221 P--LRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGG 278
L+LWD+R M+P+ EF GH RGVI M WCP+D + LLTC KD+RTICW+T + E
Sbjct: 241 SPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAE--- 297
Query: 279 QIAYELPTGTRWNFDVHWCPETPGVISASSFDGRIDGVISV--CSFEG 324
I ELP G WNFDVHW P+ PGVISASSFDG+I G+ ++ CS G
Sbjct: 298 -IVAELPAGNNWNFDVHWYPKIPGVISASSFDGKI-GIYNIEGCSRYG 343
>AT3G63460.3 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1094
Length = 1094
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/348 (57%), Positives = 243/348 (69%), Gaps = 29/348 (8%)
Query: 1 MELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLDLSSDDRELPLVES 60
M K V RS VAL+PD ++AAGTMAG VD +FS S LEIF+LD SDDR+LPLV
Sbjct: 1 MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRDLPLVGE 60
Query: 61 YRSPHRFSRLSWGKNDSVSK--SRGLVAGGLFDGEIHLW----------SENQSATVLVR 108
S RF+RL+WG+N S S+ + GL+AGGL DG I LW SEN L
Sbjct: 61 IPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVGHLSV 120
Query: 109 HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD--------SASQGEISFLSW 160
HKGPVRGLEF+ NLLASGA+DG+ICIWDL EP SA+QGEISF+SW
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW 180
Query: 161 NSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDS 220
N +VQ ILASTSY+GT V+WD + K +I+FADSVRRRCS+LQWNP++ TQ+++AS+DDS
Sbjct: 181 NRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDS 240
Query: 221 P--LRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGG 278
L+LWD+R M+P+ EF GH RGVI M WCP+D + LLTC KD+RTICW+T + E
Sbjct: 241 SPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAE--- 297
Query: 279 QIAYELPTGTRWNFDVHWCPETPGVISASSFDGRIDGVISV--CSFEG 324
I ELP G WNFDVHW P+ PGVISASSFDG+I G+ ++ CS G
Sbjct: 298 -IVAELPAGNNWNFDVHWYPKIPGVISASSFDGKI-GIYNIEGCSRYG 343
>AT1G18830.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:6489309-6494218 FORWARD LENGTH=969
Length = 969
Score = 340 bits (873), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/328 (54%), Positives = 222/328 (67%), Gaps = 23/328 (7%)
Query: 1 MELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLDLSSDDRELPLVES 60
M+ K + RS VA++P+ F+AAGTMAG VD +FS S LEIF LD S+DREL LV
Sbjct: 1 MDCIKSIGRSAFVAIAPESPFIAAGTMAGAVDLSFSSSANLEIFELDFQSNDRELKLVGQ 60
Query: 61 YRSPHRFSRLSWGKNDSVSKSRGLVAGGLFDGEIHLWS--ENQSATV-----LVRHKGPV 113
+S RF+RL+WG S S GL+AGGL DG I LW+ ++S + L +HKGPV
Sbjct: 61 CQSSERFNRLAWGSYG--SGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPV 118
Query: 114 RGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD------SASQGEISFLSWNSQVQHI 167
RGLEF+ PN LASGA+DG +CIWDLAN +P S Q EIS LSWN QH+
Sbjct: 119 RGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHV 178
Query: 168 LASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIAS-EDDSP-LRLW 225
LASTS++GT V+WD N K + +V RCS+LQW+PD Q+++AS ED SP ++L
Sbjct: 179 LASTSHNGTTVIWDVNNEKIITDLKTTV--RCSVLQWDPDHFNQILVASDEDSSPNVKLL 236
Query: 226 DLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGGQIAYELP 285
D+R+ +P+ FVGH RGVI M WCP+D LLTCGKD+RTICWNT + G+I ELP
Sbjct: 237 DIRYLQSPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKT----GKIVAELP 292
Query: 286 TGTRWNFDVHWCPETPGVISASSFDGRI 313
TG WNFDVHW P+ PGVISASS DG+I
Sbjct: 293 TGQNWNFDVHWYPKMPGVISASSVDGKI 320
>AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | Transducin family
protein / WD-40 repeat family protein |
chr2:7281615-7283583 REVERSE LENGTH=415
Length = 415
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKDSA---------SQGEIS 156
LV H GL + + L SG++D +IC+WD++ P+D + I+
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSAT--PQDKVLNAMFVYEGHESAIA 221
Query: 157 FLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIAS 216
+SW+ + +++ S DG +V+WDT+ Q+ R + L +NP L AS
Sbjct: 222 DVSWHMKNENLFGSAGEDGRLVIWDTRT-NQMQHQVKVHEREVNYLSFNPFNEWVLATAS 280
Query: 217 EDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEG 276
DS + L+DLR AP+ H V + W PN L + G+D R + W+ ++ G
Sbjct: 281 -SDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD-LNRVG 338
Query: 277 GGQIAYEL 284
Q+ EL
Sbjct: 339 EEQLEIEL 346
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 81 SRGLVAGGLFDGEIHLWSENQSAT----------VLVRHKGPVRGLEFHTTEPNLLASGA 130
G + G D +I LW + SAT V H+ + + +H NL S
Sbjct: 180 KEGYLLSGSQDQKICLW--DVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAG 237
Query: 131 EDGQICIWDL-ANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVI 189
EDG++ IWD N ++ + + E+++LS+N + +LA+ S D T+ ++D + L +
Sbjct: 238 EDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPL 297
Query: 190 SFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFV----------- 238
S ++W+P+ T ++ +S +D L +WDL +E
Sbjct: 298 HVMSSHEGEVFQVEWDPNHET-VLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELL 356
Query: 239 ----GHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
GH + W N+ + + +D+ W
Sbjct: 357 FSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQ 392
>AT1G53090.2 | Symbols: SPA4 | SPA1-related 4 |
chr1:19783748-19786690 FORWARD LENGTH=794
Length = 794
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 115/231 (49%), Gaps = 24/231 (10%)
Query: 33 ETFSLSG---KLEIFRLD-LSSDDREL--PLVESYRSPHRFSRLSWGKNDSVSKSRGLVA 86
E F+ +G K++IF + + D R++ P+VE S + S + W S + VA
Sbjct: 497 EFFATAGVNKKIKIFECESIIKDGRDIHYPVVE-LASRSKLSGICWN-----SYIKSQVA 550
Query: 87 GGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANAL 144
F+G + +W + NQ T + H+ V +++ + +P LLASG++DG + +W + +
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 610
Query: 145 EPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQW 204
++ I + + S+ LA S D + +D +N K + + S +++
Sbjct: 611 SIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF 670
Query: 205 NPDIPTQLIIASEDDSPLRLWDLRFTMA-----PIMEFVGHT--RGVIGMT 248
+ + +++S D+ L+LWDL +++ P+ F+GHT + +G++
Sbjct: 671 ---VDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLS 718
>AT1G53090.1 | Symbols: SPA4 | SPA1-related 4 |
chr1:19783748-19786690 FORWARD LENGTH=794
Length = 794
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 115/231 (49%), Gaps = 24/231 (10%)
Query: 33 ETFSLSG---KLEIFRLD-LSSDDREL--PLVESYRSPHRFSRLSWGKNDSVSKSRGLVA 86
E F+ +G K++IF + + D R++ P+VE S + S + W S + VA
Sbjct: 497 EFFATAGVNKKIKIFECESIIKDGRDIHYPVVE-LASRSKLSGICWN-----SYIKSQVA 550
Query: 87 GGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANAL 144
F+G + +W + NQ T + H+ V +++ + +P LLASG++DG + +W + +
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 610
Query: 145 EPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQW 204
++ I + + S+ LA S D + +D +N K + + S +++
Sbjct: 611 SIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF 670
Query: 205 NPDIPTQLIIASEDDSPLRLWDLRFTMA-----PIMEFVGHT--RGVIGMT 248
+ + +++S D+ L+LWDL +++ P+ F+GHT + +G++
Sbjct: 671 ---VDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLS 718
>AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 |
Transducin/WD40 repeat-like superfamily protein |
chr2:13978000-13983282 FORWARD LENGTH=675
Length = 675
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 117/247 (47%), Gaps = 26/247 (10%)
Query: 32 DETFSLSGKLEIFRL-DLSS-----DDRELPLVE-SYRSPHRFSRLSWGKNDSVSKSRGL 84
DE F+ +G ++ D SS D + P+VE S RS + S LSW K++ +
Sbjct: 383 DELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRS--KLSCLSWNKHE-----KNH 435
Query: 85 VAGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLAN 142
+A ++G + +W + QS H+ ++F TEP++L SG++D ++ +W
Sbjct: 436 IASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQ 495
Query: 143 ALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSIL 202
+ + I + +N + +A S D + +D +N+ Q + ++ S +
Sbjct: 496 EASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYV 555
Query: 203 QWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHT--RGVIGMTWCPNDGASLLTC 260
++ + + ++ DS LRLWD++ + P+ F GHT + +G+T + L C
Sbjct: 556 KF---LSNNELASASTDSTLRLWDVKDNL-PVRTFRGHTNEKNFVGLTV----NSEYLAC 607
Query: 261 GKDSRTI 267
G ++ +
Sbjct: 608 GSETNEV 614
>AT4G35050.1 | Symbols: MSI3, NFC3 | Transducin family protein /
WD-40 repeat family protein | chr4:16682752-16684751
REVERSE LENGTH=424
Length = 424
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLA-----NALEPKD--SASQGEISFL 158
L+ H+ GL + + + L SG++D +IC+WD++ L P Q I +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 159 SWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASED 218
+W+ + ++I S D +V+WD + Q+ R + L +NP L AS
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRT-NQMQHQVKVHEREINYLSFNPFNEWVLATAS-S 282
Query: 219 DSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGG 278
DS + L+DLR AP+ H V + W PN L + G+D R + W+ I+ G
Sbjct: 283 DSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD-INRVGDE 341
Query: 279 QIAYEL 284
Q+ EL
Sbjct: 342 QLEIEL 347
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26857268-26860974 FORWARD LENGTH=613
Length = 613
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 108/279 (38%), Gaps = 46/279 (16%)
Query: 79 SKSRGLVAGGLFDGEIHLWS------------ENQSATVLVRHKGPVRGLEFHTT----- 121
S S L+A G D +WS N +A +L KG T
Sbjct: 274 SPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWN 333
Query: 122 -EPNLLASGAEDGQICIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVW 180
E LLA+G+ DGQ IW L L S +G I L WN + ++L S D T VVW
Sbjct: 334 GEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTG-SVDRTAVVW 392
Query: 181 DTK--NLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFV 238
D K KQ F + W ++ S DS + L + T P F
Sbjct: 393 DVKAEEWKQQFEFHSGPTLD---VDWRNNVS---FATSSTDSMIYLCKIGETR-PAKTFT 445
Query: 239 GHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCP 298
GH V + W P G+ L +C DS WN ++L T+ + + W P
Sbjct: 446 GHQGEVNCVKWDPT-GSLLASCSDDSTAKIWNIKQ----STFVHDLREHTKEIYTIRWSP 500
Query: 299 ETPG--------VISASSFDGRI---DGVIS--VCSFEG 324
PG ++++SFD + D + +CSF G
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNG 539
>AT1G12910.1 | Symbols: ATAN11, LWD1 | Transducin/WD40 repeat-like
superfamily protein | chr1:4395114-4396154 REVERSE
LENGTH=346
Length = 346
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 5/166 (3%)
Query: 111 GPVRGLEFHTTEPNLLASGAEDGQICIWDLA-NALEPKDSASQGEISFLSWNSQVQHILA 169
GP+ +++ EP + + + D IWD+ A++ + A E+ ++W + A
Sbjct: 136 GPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV--GVFA 193
Query: 170 STSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ--WNPDIPTQLIIASEDDSPLRLWDL 227
S S DG++ V+D ++ + +S +++ WN P + D + + + D+
Sbjct: 194 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 253
Query: 228 RFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTIS 273
RF P++E H V + W P+ + T G DS+ + W+ S
Sbjct: 254 RFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISS 299
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-SASQGEISFLSWNSQV 164
V H G V L LL +G +D ++ +W + P + +++NS+
Sbjct: 11 FVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEE 70
Query: 165 QHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRL 224
+LA S G + +WD + K V +F R CS ++++P + + + D+ LR+
Sbjct: 71 VLVLAGAS-SGVIKLWDLEESKMVRAFTGH-RSNCSAVEFHPF--GEFLASGSSDTNLRV 126
Query: 225 WDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGE 275
WD R I + GHTRG+ + + P DG +++ G D+ W+ +G+
Sbjct: 127 WDTR-KKGCIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLTAGK 175
>AT3G26640.1 | Symbols: LWD2 | Transducin/WD40 repeat-like
superfamily protein | chr3:9793276-9794316 FORWARD
LENGTH=346
Length = 346
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 111 GPVRGLEFHTTEPNLLASGAEDGQICIWDLA-NALEPKDSASQGEISFLSWNSQVQHILA 169
GP+ +++ EP + + + D IWD+ ++ + A E+ ++W + A
Sbjct: 136 GPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGV--GVFA 193
Query: 170 STSYDGTMVVWDTKNLKQVISFADSVRRRCSI--LQWNPDIPTQLIIASEDDSPLRLWDL 227
S S DG++ V+D ++ + +S + L WN P + + + + D+
Sbjct: 194 SVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDI 253
Query: 228 RFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTIS 273
RF P++E H V + W P+ + + + G DS+ + W+ S
Sbjct: 254 RFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISS 299
>AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40
repeat-like superfamily protein | chr5:23556112-23557994
FORWARD LENGTH=424
Length = 424
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 109 HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-------SASQGEISFLSWN 161
H GL + + L SG++D QIC+WD+ + K A +G + ++W+
Sbjct: 177 HSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWH 236
Query: 162 SQVQHILASTSYDGTMVVWD------TKNLKQVISFADSVRRRCSILQWNPDIPTQLIIA 215
+ +++ S D +++WD +K ++ V+ A S+ C L +NP ++
Sbjct: 237 LRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVV--AHSMEVNC--LAFNP-FNEWVVAT 291
Query: 216 SEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
D ++L+DLR + F H V + W P + L +C R + W+
Sbjct: 292 GSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 28/260 (10%)
Query: 84 LVAGGLFDGEIHLWS---ENQSATVLVRHKGPVRGLEFH-TTEPNLLASGAEDGQICIWD 139
L+A G D EI LW + ++ VL HK + L+ H T++ + + S + D + WD
Sbjct: 67 LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAI--LDLHWTSDGSQIVSASPDKTVRAWD 124
Query: 140 LANALEPKDSASQGEISFLSWNSQVQH---ILASTSYDGTMVVWDTKNLKQVISFADSVR 196
+ + K A SF++ + ++ S S DGT +WD + + +F D +
Sbjct: 125 VETGKQIKKMAEHS--SFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ 182
Query: 197 RRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGAS 256
I + I D+ +++WDLR A M GH + GM+ P DG+
Sbjct: 183 ----ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEA-TMTLEGHQDTITGMSLSP-DGSY 236
Query: 257 LLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVH-----WCPETPGVISASSFDG 311
LLT G D++ W+ + ++ G + NF+ + W P+ V + SS
Sbjct: 237 LLTNGMDNKLCVWD-MRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSS--- 292
Query: 312 RIDGVISVCSFEGKIGMYKI 331
D ++ + + +YK+
Sbjct: 293 --DRMVHIWDTTSRRTIYKL 310
>AT2G19540.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr2:8461804-8464347 FORWARD LENGTH=469
Length = 469
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 86 AGGLFDGE----IHLWSENQSA-----TVLVRHKGPVRGLEFHTTEPNLLASGAEDGQIC 136
AG L G+ IHLW + H V L++ E N+ AS + DG +
Sbjct: 236 AGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVA 295
Query: 137 IWDLANALEPKDS--ASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLK---QVISF 191
+WD+ P S A +++ +SWN +LAS S DGT + D + +K V++
Sbjct: 296 VWDIRLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAH 355
Query: 192 ADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRF 229
+ + + ++W+ + L + S D+ L +WDL
Sbjct: 356 FEYHKHPITSIEWSAHEASTLAVTSGDNQ-LTIWDLSL 392
>AT3G15354.1 | Symbols: SPA3 | SPA1-related 3 | chr3:5169327-5172480
REVERSE LENGTH=837
Length = 837
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 116/233 (49%), Gaps = 36/233 (15%)
Query: 33 ETFSLSG---KLEIFRLD-LSSDDREL--PLVE-SYRSPHRFSRLSWGKNDSVSKSRGLV 85
E F+ +G K++IF + + +D+R++ P+VE + RS + S L W +S KS+ +
Sbjct: 547 ELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRS--KLSSLCW---NSYIKSQ--I 599
Query: 86 AGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQ-ICIWDLAN 142
A FDG + +W + +Q T + HK V ++ + +P LLASG++DG + I +
Sbjct: 600 ASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTGVSIGTI-- 657
Query: 143 ALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSIL 202
++ + + + S LA S D + +D +N K + + S +
Sbjct: 658 -------KTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYV 710
Query: 203 QWNPDIPTQLIIASEDDSPLRLWDLRFTM-----APIMEFVGHT--RGVIGMT 248
++ + + +++S D+ L+LWDL + +P+ F GHT + +G++
Sbjct: 711 KF---VDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLS 760
>AT5G24520.2 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like
superfamily protein | chr5:8371708-8372733 REVERSE
LENGTH=341
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 23/236 (9%)
Query: 60 SYRSPHRFSRLSWGKNDSVSKSRG--LVAGGLFDGEIHLWSENQSAT------VLVRHK- 110
S+ P+ ++L + S G L + G F + LW N+ ++ VL K
Sbjct: 72 SFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDF---LRLWEINEDSSTVEPISVLNNSKT 128
Query: 111 ----GPVRGLEFHTTEPNLLASGAEDGQICIWDLANAL-EPKDSASQGEISFLSWNSQVQ 165
P+ +++ EP L + + D IWD+ ++ E + A E+ ++W
Sbjct: 129 SEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA-- 186
Query: 166 HILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ--WNPDIPTQLIIASEDDSPLR 223
+ AS S DG++ ++D ++ + +S + +L+ WN + D + +
Sbjct: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN--TISGEGG 277
+ D+R P+ E H V + W P + + G D++ + W T++G G
Sbjct: 247 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNG 302
>AT5G24520.3 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like
superfamily protein | chr5:8371708-8372733 REVERSE
LENGTH=341
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 23/236 (9%)
Query: 60 SYRSPHRFSRLSWGKNDSVSKSRG--LVAGGLFDGEIHLWSENQSAT------VLVRHK- 110
S+ P+ ++L + S G L + G F + LW N+ ++ VL K
Sbjct: 72 SFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDF---LRLWEINEDSSTVEPISVLNNSKT 128
Query: 111 ----GPVRGLEFHTTEPNLLASGAEDGQICIWDLANAL-EPKDSASQGEISFLSWNSQVQ 165
P+ +++ EP L + + D IWD+ ++ E + A E+ ++W
Sbjct: 129 SEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA-- 186
Query: 166 HILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ--WNPDIPTQLIIASEDDSPLR 223
+ AS S DG++ ++D ++ + +S + +L+ WN + D + +
Sbjct: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN--TISGEGG 277
+ D+R P+ E H V + W P + + G D++ + W T++G G
Sbjct: 247 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNG 302
>AT5G24520.1 | Symbols: TTG1, TTG, URM23, ATTTG1 | Transducin/WD40
repeat-like superfamily protein | chr5:8371708-8372733
REVERSE LENGTH=341
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 23/236 (9%)
Query: 60 SYRSPHRFSRLSWGKNDSVSKSRG--LVAGGLFDGEIHLWSENQSAT------VLVRHK- 110
S+ P+ ++L + S G L + G F + LW N+ ++ VL K
Sbjct: 72 SFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDF---LRLWEINEDSSTVEPISVLNNSKT 128
Query: 111 ----GPVRGLEFHTTEPNLLASGAEDGQICIWDLANAL-EPKDSASQGEISFLSWNSQVQ 165
P+ +++ EP L + + D IWD+ ++ E + A E+ ++W
Sbjct: 129 SEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA-- 186
Query: 166 HILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ--WNPDIPTQLIIASEDDSPLR 223
+ AS S DG++ ++D ++ + +S + +L+ WN + D + +
Sbjct: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN--TISGEGG 277
+ D+R P+ E H V + W P + + G D++ + W T++G G
Sbjct: 247 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNG 302
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-SASQGEISFLSWNSQV 164
L + V+ ++ H TEP +LAS G +CIW+ + K ++ + + ++
Sbjct: 11 LAQRSERVKSVDLHPTEPWILAS-LYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 69
Query: 165 QHILASTSYDGTMVVWDTKNLKQVISF-ADSVRRRCSILQWNPDIPTQLIIASEDDSPLR 223
Q ++A D + V++ + +V F A S RC + +P +P +++S DD ++
Sbjct: 70 QWVVAGAD-DMYIRVYNYNTMDKVKVFEAHSDYIRCVAV--HPTLP--YVLSSSDDMLIK 124
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
LWD A F GH+ V+ +T+ P D + + D WN
Sbjct: 125 LWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
>AT1G52360.2 | Symbols: | Coatomer, beta' subunit |
chr1:19499420-19505397 FORWARD LENGTH=970
Length = 970
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-SASQGEISFLSWNSQV 164
L + V+ ++ H TEP +LAS G +CIW+ + K ++ + + ++
Sbjct: 55 LAQRSERVKSVDLHPTEPWILAS-LYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 113
Query: 165 QHILASTSYDGTMVVWDTKNLKQVISF-ADSVRRRCSILQWNPDIPTQLIIASEDDSPLR 223
Q ++A D + V++ + +V F A S RC + +P +P +++S DD ++
Sbjct: 114 QWVVAGAD-DMYIRVYNYNTMDKVKVFEAHSDYIRCVAV--HPTLP--YVLSSSDDMLIK 168
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
LWD A F GH+ V+ +T+ P D + + D WN
Sbjct: 169 LWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 215
>AT3G27640.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:10232307-10235467 FORWARD LENGTH=535
Length = 535
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 38/220 (17%)
Query: 70 LSWGKNDSVSKSRGLVAGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLA 127
+SW K DS L A G D I +W EN+ VL+ H G V+ + H T +LL
Sbjct: 134 ISWIKGDSCL----LTASG--DQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLV 187
Query: 128 SGAEDGQICIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQ 187
SG+ DG +WD L K S+ + E I ++ G + +K +++
Sbjct: 188 SGSRDGCFALWD----LRCKSSSHKEEFC----------INSTGMVKGAHLSPLSKRIRR 233
Query: 188 VISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFV--------- 238
+ + S+ S+L +I + A DS L+ WD+R AP +
Sbjct: 234 RKAASSSI---TSVLYVKDEI--TIATAGAPDSALKFWDIRKLKAPFAQASPQSDPTNTK 288
Query: 239 -GHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGG 277
+ G++ ++ + G L KD+R +NT+ + G
Sbjct: 289 EKRSHGIVSLSQ-DSSGTYLTASCKDNRIYLYNTLRLDKG 327
>AT4G11110.1 | Symbols: SPA2 | SPA1-related 2 | chr4:6772163-6776675
FORWARD LENGTH=1036
Length = 1036
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 31/250 (12%)
Query: 34 TFSLSGKLEIFRLDL---SSDDRELPLVESYRSPHR--FSRLSWGKNDSVSKSRGLVAGG 88
T +S K++I+ + S D P +E P+R S + W N+ + R +A
Sbjct: 740 TAGVSKKIKIYEFNSLFNESVDIHYPAIEM---PNRSKLSGVCW--NNYI---RNYLASS 791
Query: 89 LFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEP 146
+DG + LW + Q+ + + H+ ++F P LASG++D + +W++
Sbjct: 792 DYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCL 851
Query: 147 KDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNP 206
+ + + ++ Q H+LA S D +D +NL+ + S ++
Sbjct: 852 GTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKF-- 909
Query: 207 DIPTQLIIASEDDSPLRLWDLRFTM-------APIMEFVGHT--RGVIGMTWCPNDGASL 257
+ + ++ + D+ L+LWDL+ T A + F GHT + +G++ +DG
Sbjct: 910 -LDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLS--TSDG--Y 964
Query: 258 LTCGKDSRTI 267
+ CG ++ +
Sbjct: 965 IACGSETNEV 974
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 13/199 (6%)
Query: 92 GEIHLWSENQSATVLVR--HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKDS 149
G + W N + + HK +R L F T+ S ++D + +WD ++
Sbjct: 193 GTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKF-CSCSDDTTVKVWDFTKCVDESSL 251
Query: 150 ASQG-EISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDI 208
G ++ + W+ + +L S D + +WDT++ +++ S S+ +WN +
Sbjct: 252 TGHGWDVKSVDWHP-TKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSV-KWNQN- 308
Query: 209 PTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTIC 268
++ + D ++L+D+R TM + F GHT+ V + W P ++ D
Sbjct: 309 -GNWLLTASKDQIIKLYDIR-TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICH 366
Query: 269 WNTISGEGGGQIAYELPTG 287
W I G QI E+P
Sbjct: 367 W--IVGHENPQI--EIPNA 381
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 13/199 (6%)
Query: 92 GEIHLWSENQSATVLVR--HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKDS 149
G + W N + + HK +R L F T+ S ++D + +WD ++
Sbjct: 187 GTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKF-CSCSDDTTVKVWDFTKCVDESSL 245
Query: 150 ASQG-EISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDI 208
G ++ + W+ + +L S D + +WDT++ +++ S S+ +WN +
Sbjct: 246 TGHGWDVKSVDWHP-TKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSV-KWNQN- 302
Query: 209 PTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTIC 268
++ + D ++L+D+R TM + F GHT+ V + W P ++ D
Sbjct: 303 -GNWLLTASKDQIIKLYDIR-TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICH 360
Query: 269 WNTISGEGGGQIAYELPTG 287
W I G QI E+P
Sbjct: 361 W--IVGHENPQI--EIPNA 375
>AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 94 IHLWSENQSATVLVRHKGP---VRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-S 149
++LW+ + S + GP V +++ T E + ++ G GQ+ +WD +
Sbjct: 196 VYLWTASNSKVTKLCDLGPNDSVCSVQW-TREGSYISIGTSHGQVQVWDGTQCKRVRTMG 254
Query: 150 ASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIP 209
Q L+WNS+ IL+S S D ++ D + +S + L+W+ D
Sbjct: 255 GHQTRTGVLAWNSR---ILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHD-- 309
Query: 210 TQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTIC- 268
+ + + +D+ L +W+ + PI++ HT V +TW P+ +SLL G + C
Sbjct: 310 DRELASGGNDNQLLVWN-NHSQQPILKLTEHTAAVKAITWSPHQ-SSLLASGGGTADRCI 367
Query: 269 --WNTISGE 275
WNT +G
Sbjct: 368 RFWNTTNGN 376
>AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 94 IHLWSENQSATVLVRHKGP---VRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-S 149
++LW+ + S + GP V +++ T E + ++ G GQ+ +WD +
Sbjct: 196 VYLWTASNSKVTKLCDLGPNDSVCSVQW-TREGSYISIGTSHGQVQVWDGTQCKRVRTMG 254
Query: 150 ASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIP 209
Q L+WNS+ IL+S S D ++ D + +S + L+W+ D
Sbjct: 255 GHQTRTGVLAWNSR---ILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHD-- 309
Query: 210 TQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTIC- 268
+ + + +D+ L +W+ + PI++ HT V +TW P+ +SLL G + C
Sbjct: 310 DRELASGGNDNQLLVWN-NHSQQPILKLTEHTAAVKAITWSPHQ-SSLLASGGGTADRCI 367
Query: 269 --WNTISGE 275
WNT +G
Sbjct: 368 RFWNTTNGN 376
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLA--NALEPKDSASQGEISFLSWNSQ 163
V H V L+ +L +G ED ++ +W + NA+ S G I +++++
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDAS 70
Query: 164 VQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLR 223
+ ++A+ + GT+ +WD + K V + R C + ++P + + D+ L+
Sbjct: 71 -EGLVAAGAASGTIKLWDLEEAKVVRTLTGH-RSNCVSVNFHPF--GEFFASGSLDTNLK 126
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGE 275
+WD+R I + GHTRGV + + P DG +++ G+D+ W+ +G+
Sbjct: 127 IWDIR-KKGCIHTYKGHTRGVNVLRFTP-DGRWIVSGGEDNVVKVWDLTAGK 176
>AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:7112652-7115191 FORWARD LENGTH=351
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 147 KDSASQ-GEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWN 205
KDSA +S +W+ + +A+T + ++ WD + +K+V S + R + +N
Sbjct: 162 KDSAGMLHSLSGGAWDPHDVNAVAATG-ESSVQFWDLRTMKKVNSIEHAHVRG---VDYN 217
Query: 206 PDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSR 265
P +++ +ED+S + +WDLR P+ E GHT + P +L+ G DS
Sbjct: 218 PK-REHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSV 276
Query: 266 TICWNTISGEGGGQIAYELPTGTRWN---------------FDVHWCPETPGVISASSFD 310
W + + + TR + + W P V ++ S+D
Sbjct: 277 VNLWYASATSSDDKTSESPVESTRQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYD 336
Query: 311 GRI 313
GR+
Sbjct: 337 GRV 339
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLA--NALEPKDSASQGEISFLSWNSQ 163
V H V L+ +L +G ED ++ +W + NA+ S G S S+
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE 71
Query: 164 VQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLR 223
V ++A+ + GT+ +WD + K V + R C + ++P + + D+ L+
Sbjct: 72 V--LVAAGAASGTIKLWDLEEAKIVRTLTGH-RSNCISVDFHPF--GEFFASGSLDTNLK 126
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGE 275
+WD+R I + GHTRGV + + P DG +++ G+D+ W+ +G+
Sbjct: 127 IWDIR-KKGCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGK 176
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLA--NALEPKDSASQGEISFLSWNSQ 163
V H V L+ +L +G ED ++ +W + NA+ S G S S+
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE 71
Query: 164 VQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLR 223
V ++A+ + GT+ +WD + K V + R C + ++P + + D+ L+
Sbjct: 72 V--LVAAGAASGTIKLWDLEEAKIVRTLTGH-RSNCISVDFHPF--GEFFASGSLDTNLK 126
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGE 275
+WD+R I + GHTRGV + + P DG +++ G+D+ W+ +G+
Sbjct: 127 IWDIR-KKGCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGK 176
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 92 GEIHLWSENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLAN-ALEPKDSA 150
G + ++ + L H + ++F + + NLLAS + D + +W N +L +
Sbjct: 25 GNVPIYKPYRHLKTLEGHTAAISCVKF-SNDGNLLASASVDKTMILWSATNYSLIHRYEG 83
Query: 151 SQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPT 210
IS L+W+S H S S D T+ +WD ++ + + + +NP P+
Sbjct: 84 HSSGISDLAWSSD-SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP--PS 140
Query: 211 QLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
LI++ D +R+W+++ T + H+ + + + DG+ +++ D W+
Sbjct: 141 NLIVSGSFDETIRIWEVK-TGKCVRMIKAHSMPISSVHF-NRDGSLIVSASHDGSCKIWD 198
Query: 271 TISG 274
G
Sbjct: 199 AKEG 202
>AT4G18900.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:10356465-10359078 FORWARD LENGTH=461
Length = 461
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 109 HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLAN-ALEPKDSASQGEISFLSWNSQVQHI 167
H V GL ++ N+LAS + D ++ +WD+A + E+ ++WN +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 168 LASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDL 227
L S S+D T+V+ D + F SV L W+P +++ ED + ++ +D+
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHS-GFKWSVMSDVESLAWDPHSEHSFVVSLEDGT-VKGFDV 349
Query: 228 RFTMA------PIMEFVGHTRGVIGMTW---CPNDGASLLTCGKDSRTICWNTISGEGGG 278
R P GH +++ PN LL G RT+ +S
Sbjct: 350 RQASISASESNPSFTINGHDEAATSVSYNISAPN----LLATGSKDRTVKLWDLSNNEPS 405
Query: 279 QIAYELPTGTRWNFDVHWCPETPGVISASSFDGRI 313
IA P F + + P+ P +++ G +
Sbjct: 406 CIATHNPNAGGLFF-IAFSPDNPFLLAMGGVMGEL 439
>AT1G76260.1 | Symbols: DWA2 | DWD (DDB1-binding WD40 protein)
hypersensitive to ABA 2 | chr1:28610363-28612998 FORWARD
LENGTH=350
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 27/204 (13%)
Query: 131 EDGQICIWDL------ANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKN 184
++ + W L A L + + + +S +WN + +A+TS + ++ WD +
Sbjct: 141 DEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNPHDVNSVAATS-ESSIQFWDLRT 199
Query: 185 LKQVISFADSVRRRCSILQWNPDIPTQLIIASEDD-SPLRLWDLRFTMAPIMEFVGHTRG 243
+K+ S R + + ++ + I+ S DD S + LWDLR T P+ E GHT
Sbjct: 200 MKKNNSI-----ERAHVRNVDYNLKREHILVSADDESGIHLWDLRKTKFPVQELPGHTHW 254
Query: 244 VIGMTWCPNDGASLLTCGKDSRTICW-NTISGEGGGQIAYELPTGTRWN----------- 291
+ P +L+ G DS W + S E + + R N
Sbjct: 255 TWAVRCNPEYEELILSVGTDSAVNLWFASASSEHKTSESPVEASRQRVNPLLNSYTDYED 314
Query: 292 --FDVHWCPETPGVISASSFDGRI 313
+ + W P + ++ S+DGR+
Sbjct: 315 SVYGLAWSSREPWIFASLSYDGRV 338
>AT5G08560.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:2771104-2773827 REVERSE LENGTH=589
Length = 589
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 77 SVSKSRGLVAGGLFDGEIHLWSENQSATVLVRHKGPVRGLE-----FHTTEPNLLASGAE 131
S+S + L + EI LW+ ++ R+KG R F + +ASG+E
Sbjct: 450 SLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSE 509
Query: 132 DGQICIWDLAN-ALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQ 187
D Q+ IW + L + G ++ +SW+ H+LAS S DGT+ +W + Q
Sbjct: 510 DSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQ 566
>AT5G08560.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:2771104-2773827 REVERSE LENGTH=589
Length = 589
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 77 SVSKSRGLVAGGLFDGEIHLWSENQSATVLVRHKGPVRGLE-----FHTTEPNLLASGAE 131
S+S + L + EI LW+ ++ R+KG R F + +ASG+E
Sbjct: 450 SLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSE 509
Query: 132 DGQICIWDLAN-ALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQ 187
D Q+ IW + L + G ++ +SW+ H+LAS S DGT+ +W + Q
Sbjct: 510 DSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQ 566