Miyakogusa Predicted Gene

Lj0g3v0038749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0038749.1 Non Chatacterized Hit- tr|B9TAK8|B9TAK8_RICCO
Putative uncharacterized protein OS=Ricinus communis G,76.27,3e-18,
,CUFF.1741.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43780.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    95   1e-20
AT2G43780.1 | Symbols:  | unknown protein; Has 30 Blast hits to ...    95   1e-20

>AT2G43780.2 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: mitochondrion;
          EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
          growth stages; Has 30 Blast hits to 30 proteins in 11
          species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
          0; Plants - 30; Viruses - 0; Other Eukaryotes - 0
          (source: NCBI BLink). | chr2:18136444-18136647 REVERSE
          LENGTH=67
          Length = 67

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 1/68 (1%)

Query: 1  MAGVLGFARLPPKAKNFVVAGGLTAFVFGTYFYTMRAVGGTDELQVAIDKFEADKSKQEG 60
          MAG  GF+ L PK KN VVAGGLTAFVFG YFYTMRAVGGTDELQVAIDKFE  K + + 
Sbjct: 1  MAGFPGFSYLGPKGKNTVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDKFEGQK-QVDT 59

Query: 61 DPSVPSKV 68
          D  VPSKV
Sbjct: 60 DTKVPSKV 67


>AT2G43780.1 | Symbols:  | unknown protein; Has 30 Blast hits to
          30 proteins in 11 species: Archae - 0; Bacteria - 0;
          Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
          Eukaryotes - 0 (source: NCBI BLink). |
          chr2:18136444-18136647 REVERSE LENGTH=67
          Length = 67

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 54/68 (79%), Gaps = 1/68 (1%)

Query: 1  MAGVLGFARLPPKAKNFVVAGGLTAFVFGTYFYTMRAVGGTDELQVAIDKFEADKSKQEG 60
          MAG  GF+ L PK KN VVAGGLTAFVFG YFYTMRAVGGTDELQVAIDKFE  K + + 
Sbjct: 1  MAGFPGFSYLGPKGKNTVVAGGLTAFVFGVYFYTMRAVGGTDELQVAIDKFEGQK-QVDT 59

Query: 61 DPSVPSKV 68
          D  VPSKV
Sbjct: 60 DTKVPSKV 67