Miyakogusa Predicted Gene

Lj0g3v0038179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0038179.1 Non Chatacterized Hit- tr|I3S9T5|I3S9T5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.7,0,ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN,NULL; FAMILY NOT
NAMED,NULL; no description,Zinc,CUFF.1716.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47160.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   304   4e-83
AT3G47160.2 | Symbols:  | RING/U-box superfamily protein | chr3:...   295   2e-80
AT5G01520.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   286   1e-77
AT5G58787.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   273   8e-74
AT5G58787.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   244   5e-65
AT5G01520.2 | Symbols:  | RING/U-box superfamily protein | chr5:...   203   8e-53
AT1G24440.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   185   2e-47
AT1G13195.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   176   1e-44
AT1G13195.2 | Symbols:  | RING/U-box superfamily protein | chr1:...   152   2e-37

>AT3G47160.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=245
          Length = 245

 Score =  304 bits (778), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 142/232 (61%), Positives = 178/232 (76%)

Query: 16  MGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNX 75
           M K SF++SLKALEADIQ+ANT+ALD+PRE DG   QMRLSY+P A   L LVQW D + 
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 76  XXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEV 135
                      Y+TYA+G TTMS+YERK+SI+ FY++IFP+LLQL++G+TDLD+RKQKEV
Sbjct: 61  AGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEV 120

Query: 136 YSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQS 195
              RY+ K E  + + SEIDIEREEECG+C E+   VVLPNC H +C+KCY DW  RS+S
Sbjct: 121 CKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSES 180

Query: 196 CPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPD 247
           CPFCRDSLKRVNSGDLW+  + S+ V+M T+ +EN K LF+YIE LPL++PD
Sbjct: 181 CPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 232


>AT3G47160.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:17360238-17361879 REVERSE LENGTH=257
          Length = 257

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 142/244 (58%), Positives = 178/244 (72%), Gaps = 12/244 (4%)

Query: 16  MGKCSFQESLKALEADIQYANTL------------ALDHPRENDGGCFQMRLSYSPVAPI 63
           M K SF++SLKALEADIQ+ANT+            ALD+PRE DG   QMRLSY+P A  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 64  FLPLVQWADYNXXXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKG 123
            L LVQW D +            Y+TYA+G TTMS+YERK+SI+ FY++IFP+LLQL++G
Sbjct: 61  LLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERG 120

Query: 124 LTDLDERKQKEVYSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCL 183
           +TDLD+RKQKEV   RY+ K E  + + SEIDIEREEECG+C E+   VVLPNC H +C+
Sbjct: 121 ITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCI 180

Query: 184 KCYSDWCMRSQSCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPL 243
           KCY DW  RS+SCPFCRDSLKRVNSGDLW+  + S+ V+M T+ +EN K LF+YIE LPL
Sbjct: 181 KCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPL 240

Query: 244 IIPD 247
           ++PD
Sbjct: 241 VVPD 244


>AT5G01520.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208399 FORWARD LENGTH=242
          Length = 242

 Score =  286 bits (731), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 133/229 (58%), Positives = 170/229 (74%)

Query: 20  SFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXX 79
           SF++SLKALEADIQ+ANTLA ++P E DGG  QMRLSYSP A +FL L+QW D +     
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 80  XXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTR 139
                  Y  Y +G TTMS++ERK+SIR+FY ++FP+LLQL  G+TD++ERKQKE+   R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 140 YQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQSCPFC 199
           Y++K    + + SEID+EREEECG+C E++ KVVLP C H MC+ CY +W  RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 200 RDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPDP 248
           R SLKRVNSGDLWIYT  +EI D+  ++KEN K L +YI+ LPL+  DP
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDP 232


>AT5G58787.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=242
          Length = 242

 Score =  273 bits (698), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 140/232 (60%), Positives = 176/232 (75%), Gaps = 3/232 (1%)

Query: 16  MGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNX 75
           M K SF++SLKALEADIQ+ANTLALD+PRE DG   QMRLSYSP A  FL LVQW D   
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 76  XXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEV 135
                      Y+TYA+G TTMS+YERK+SIR+F ++I P+L QLQ+G+TD+D+ KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV 120

Query: 136 YSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQS 195
              RY++K    E   SEI+IEREEECG+C E+ +KVVLPNC H +C+KCY DW  RSQS
Sbjct: 121 CKMRYRKKD---ESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 177

Query: 196 CPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPD 247
           CPFCRDSLKRV+SGDLW++ D ++ V++  + +EN K LF+YIE LPL++PD
Sbjct: 178 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPD 229


>AT5G58787.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:23742733-23744324 FORWARD LENGTH=227
          Length = 227

 Score =  244 bits (622), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 132/232 (56%), Positives = 163/232 (70%), Gaps = 18/232 (7%)

Query: 16  MGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNX 75
           M K SF++SLKALEADIQ+ANTLALD+PRE DG   QMRLSYSP A  FL LVQW D   
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 76  XXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEV 135
                      Y+TYA+G TTMS+YERK+SIR+F                D+D+ KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEV 105

Query: 136 YSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQS 195
              RY++K E      SEI+IEREEECG+C E+ +KVVLPNC H +C+KCY DW  RSQS
Sbjct: 106 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 162

Query: 196 CPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPD 247
           CPFCRDSLKRV+SGDLW++ D ++ V++  + +EN K LF+YIE LPL++PD
Sbjct: 163 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPD 214


>AT5G01520.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:206797-208170 FORWARD LENGTH=172
          Length = 172

 Score =  203 bits (517), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 94/169 (55%), Positives = 124/169 (73%)

Query: 20  SFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXX 79
           SF++SLKALEADIQ+ANTLA ++P E DGG  QMRLSYSP A +FL L+QW D +     
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 80  XXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTR 139
                  Y  Y +G TTMS++ERK+SIR+FY ++FP+LLQL  G+TD++ERKQKE+   R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 140 YQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSD 188
           Y++K    + + SEID+EREEECG+C E++ KVVLP C H MC+ CY +
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRN 172


>AT1G24440.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:8662340-8663777 FORWARD LENGTH=251
          Length = 251

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 144/249 (57%), Gaps = 24/249 (9%)

Query: 13  YLGMGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWAD 72
           Y  + K S+++SLK LEADI++AN LA + P    G   QM+L  S +AP F+ L+QW D
Sbjct: 2   YYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMD 61

Query: 73  YN--XXXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDE- 129
           ++              Y   A+G    S Y RK++IR+FY +I P+L +L     DL + 
Sbjct: 62  FSCLLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDE 121

Query: 130 -----------RKQKEVYSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCC 178
                      +KQ ++  +RY           + ID+ERE+ECG+C E   K+VLPNCC
Sbjct: 122 SLWYPNPKAITKKQYDIEGSRYM----------NSIDLEREDECGICLEPCTKMVLPNCC 171

Query: 179 HYMCLKCYSDWCMRSQSCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYI 238
           H MC+KCY +W  +S+SCPFCR S+KRVNS DLW+ T   ++VD  TV KE+    +L+I
Sbjct: 172 HAMCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHI 231

Query: 239 ESLPLIIPD 247
            SLP   P+
Sbjct: 232 NSLPKDYPE 240


>AT1G13195.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4503347 REVERSE LENGTH=260
          Length = 260

 Score =  176 bits (445), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 133/233 (57%), Gaps = 7/233 (3%)

Query: 21  FQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXX---- 76
           + ESLK LEAD+Q+AN+LA   P   +    QM+L +S  A + L L++W D +      
Sbjct: 16  YYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIP 75

Query: 77  XXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVY 136
                     Y   ++G   ++ + RK++I +FY +I P+L  L   L +L E       
Sbjct: 76  RYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDEL-ETTDIGFD 134

Query: 137 STRYQRKT--ECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQ 194
             R  +K   E R  R S   +EREEECG+C E   K+VLPNCCH MC+KCY +W ++SQ
Sbjct: 135 LKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQ 194

Query: 195 SCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPD 247
           SCPFCR S+KRVNS DLW+    +++VD  T  +E+    +LYI SLP   P+
Sbjct: 195 SCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPE 247


>AT1G13195.2 | Symbols:  | RING/U-box superfamily protein |
           chr1:4501778-4502855 REVERSE LENGTH=222
          Length = 222

 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 114/203 (56%), Gaps = 7/203 (3%)

Query: 51  FQMRLSYSPVAPIFLPLVQWADYNXX----XXXXXXXXXXYVTYANGNTTMSIYERKSSI 106
            QM+L +S  A + L L++W D +                Y   ++G   ++ + RK++I
Sbjct: 8   LQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATI 67

Query: 107 RQFYSIIFPALLQLQKGLTDLDERKQKEVYSTRYQRKT--ECRERRQSEIDIEREEECGV 164
            +FY +I P+L  L   L +L E         R  +K   E R  R S   +EREEECG+
Sbjct: 68  SEFYGVILPSLQLLHSNLDEL-ETTDIGFDLKRLSKKITKEARSSRFSNAGLEREEECGI 126

Query: 165 CFEVKAKVVLPNCCHYMCLKCYSDWCMRSQSCPFCRDSLKRVNSGDLWIYTDMSEIVDMG 224
           C E   K+VLPNCCH MC+KCY +W ++SQSCPFCR S+KRVNS DLW+    +++VD  
Sbjct: 127 CLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTR 186

Query: 225 TVFKENCKMLFLYIESLPLIIPD 247
           T  +E+    +LYI SLP   P+
Sbjct: 187 TASREDLFRFYLYINSLPKDYPE 209