Miyakogusa Predicted Gene

Lj0g3v0037729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0037729.1 Non Chatacterized Hit- tr|G7ZZ86|G7ZZ86_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.16,0.0000003,coiled-coil,NULL; seg,NULL,CUFF.1694.1
         (904 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04920.1 | Symbols: SFR6 | sensitive to freezing 6 | chr4:249...    60   5e-09
AT4G04920.2 | Symbols: SFR6 | sensitive to freezing 6 | chr4:249...    60   6e-09

>AT4G04920.1 | Symbols: SFR6 | sensitive to freezing 6 |
            chr4:2497931-2504996 FORWARD LENGTH=1278
          Length = 1278

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 33/45 (73%)

Query: 821  QVGSSNIQGWLHYNVRNYTVLPEVVETSLSPHRQNIPHLRDANAA 865
            QVGS NIQ  LHY   NYTVLPEVVE +L PH QN+P  R A+AA
Sbjct: 1071 QVGSGNIQVRLHYIDGNYTVLPEVVEAALGPHMQNMPRPRGADAA 1115


>AT4G04920.2 | Symbols: SFR6 | sensitive to freezing 6 |
            chr4:2497931-2504996 FORWARD LENGTH=1267
          Length = 1267

 Score = 60.5 bits (145), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 33/45 (73%)

Query: 821  QVGSSNIQGWLHYNVRNYTVLPEVVETSLSPHRQNIPHLRDANAA 865
            QVGS NIQ  LHY   NYTVLPEVVE +L PH QN+P  R A+AA
Sbjct: 1060 QVGSGNIQVRLHYIDGNYTVLPEVVEAALGPHMQNMPRPRGADAA 1104