Miyakogusa Predicted Gene

Lj0g3v0037019.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0037019.2 Non Chatacterized Hit- tr|A8B830|A8B830_GIAIC
Putative uncharacterized protein OS=Giardia
intestinal,23.57,1e-17,LMBR1,LMBR1-like membrane protein;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.1626.2
         (509 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01460.1 | Symbols:  | LMBR1-like membrane protein | chr5:186...   825   0.0  
AT3G08930.1 | Symbols:  | LMBR1-like membrane protein | chr3:271...   823   0.0  

>AT5G01460.1 | Symbols:  | LMBR1-like membrane protein |
           chr5:186823-190008 FORWARD LENGTH=509
          Length = 509

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/509 (77%), Positives = 433/509 (85%)

Query: 1   MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILML 60
           MGDFN                 ++YLLVNYQHPDD NQAYFPKFVVV GLS+A ISILML
Sbjct: 1   MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML 60

Query: 61  PADVANRQACRHAIYNGACNLTLPMKDLWLAIYILDAVLVFFVIPFAMFFYEGDQDKSVG 120
           PADVANR ACRH+IYNGACNLTLPMKDLWLA+YI+DAVLVFF+IPFAMFFYEGDQDK++G
Sbjct: 61  PADVANRHACRHSIYNGACNLTLPMKDLWLAVYIVDAVLVFFIIPFAMFFYEGDQDKALG 120

Query: 121 KRIKSALLWMVTTAIVCALVLGTLYGLVGKVDFTVRHLXXXXXXXXXXWNFNNGQQCIGS 180
           KRIKSAL+W+VTTA+VCALVLG LYG++GKVDF+VRHL          W F+N Q CIG+
Sbjct: 121 KRIKSALIWVVTTAVVCALVLGILYGVIGKVDFSVRHLSSATTTFPTSWQFSNNQPCIGN 180

Query: 181 GTKQCSAYSASPSSEKTWTMRATFPEYVVALATIVGSVLFSIFGGVGIACLPMGLIFSFI 240
             +QCSAY+A+ +SEKTW+MR TFPEYVVALATIVGSVLF+IFGGVGIACLP+GLI +FI
Sbjct: 181 TARQCSAYTANAASEKTWSMRTTFPEYVVALATIVGSVLFTIFGGVGIACLPLGLITAFI 240

Query: 241 RRPKAVITRSQYIKEATELGKKARELKKAAESLRQEEKGGAKGRKFRKNVKAVEKELFQL 300
           RRPKAVITRSQYIKEATELGKKAR+LKKAA++L QEE+ GAKGRK+RKNVKAVEKEL QL
Sbjct: 241 RRPKAVITRSQYIKEATELGKKARDLKKAADALHQEERSGAKGRKWRKNVKAVEKELLQL 300

Query: 301 EEDVKLLEEMYPQGEKAETTWALTVLGYLAKFVLGILGFIVSVAWVSHIIIYLLIDPPLS 360
           EEDV LLEEMYPQGE+AET WA TVLGYLAKFVLGILG IVSVAW++HIIIYLL+DPPLS
Sbjct: 301 EEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFVLGILGLIVSVAWIAHIIIYLLVDPPLS 360

Query: 361 PFLNEVFIKLDDIWGLLGTXXXXXXXXXXXXXVIAGAMMLGLKLVFITIHPMKWGGTLMN 420
           PFLNEVFIKLDD+WGLLGT             VIAGAMMLGLKLVFITIHPMKWG TLMN
Sbjct: 361 PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN 420

Query: 421 SFLFNVGLILLCSISVIQFCSXXXXXXXXXXXXXEIFGHTLESLRGIKYLYKYNVFQIAF 480
           SFLFNVGLILLCSISVIQFC+             EIFGHTL+SLRGIKYLYKYNVFQI F
Sbjct: 421 SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF 480

Query: 481 VVLAGLTFVYYAAFGWRRKKPSGRFQLST 509
           VVLAGLTF+YY AFGWRRKKPSGRFQLST
Sbjct: 481 VVLAGLTFLYYIAFGWRRKKPSGRFQLST 509


>AT3G08930.1 | Symbols:  | LMBR1-like membrane protein |
           chr3:2713562-2717058 FORWARD LENGTH=509
          Length = 509

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/509 (77%), Positives = 432/509 (84%)

Query: 1   MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILML 60
           MGDFN                 ++YLLVNYQHPDD NQAYFPKFVVV GLS+A ISILML
Sbjct: 1   MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML 60

Query: 61  PADVANRQACRHAIYNGACNLTLPMKDLWLAIYILDAVLVFFVIPFAMFFYEGDQDKSVG 120
           PADVANR ACRHAIYNGACNLTLPMKDLWLAIYI+DA+LVFFVIPFAMFFYEGDQDK++G
Sbjct: 61  PADVANRHACRHAIYNGACNLTLPMKDLWLAIYIVDAILVFFVIPFAMFFYEGDQDKTLG 120

Query: 121 KRIKSALLWMVTTAIVCALVLGTLYGLVGKVDFTVRHLXXXXXXXXXXWNFNNGQQCIGS 180
           KRIKSAL+W+VTTA+VCALVLG LYG++GKVDF+VRHL          W F+N Q CIG+
Sbjct: 121 KRIKSALIWVVTTAVVCALVLGILYGVIGKVDFSVRHLASATSTFPTSWQFSNTQPCIGN 180

Query: 181 GTKQCSAYSASPSSEKTWTMRATFPEYVVALATIVGSVLFSIFGGVGIACLPMGLIFSFI 240
             +QCSA++A+P+SEKTWTMR TFPEYVVALATIVGSVLF+IFGGVGIACLP+GLI +FI
Sbjct: 181 TARQCSAFTANPTSEKTWTMRTTFPEYVVALATIVGSVLFTIFGGVGIACLPLGLITAFI 240

Query: 241 RRPKAVITRSQYIKEATELGKKARELKKAAESLRQEEKGGAKGRKFRKNVKAVEKELFQL 300
           RRPKAVITRSQYIKEATELGKKARELKKAA+ L QEE+ GAKGRK+RKNVKAVEKEL QL
Sbjct: 241 RRPKAVITRSQYIKEATELGKKARELKKAADGLHQEERSGAKGRKWRKNVKAVEKELLQL 300

Query: 301 EEDVKLLEEMYPQGEKAETTWALTVLGYLAKFVLGILGFIVSVAWVSHIIIYLLIDPPLS 360
           EEDV LLEEMYPQGE+AET WA TVLGYLAKF+LGI+G IVS+AWV+HIIIYLL+DPPLS
Sbjct: 301 EEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFILGIVGLIVSIAWVAHIIIYLLVDPPLS 360

Query: 361 PFLNEVFIKLDDIWGLLGTXXXXXXXXXXXXXVIAGAMMLGLKLVFITIHPMKWGGTLMN 420
           PFLNEVFIKLDD+WGLLGT             VIAGAMMLGLKLVFITIHPMKWG TLMN
Sbjct: 361 PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN 420

Query: 421 SFLFNVGLILLCSISVIQFCSXXXXXXXXXXXXXEIFGHTLESLRGIKYLYKYNVFQIAF 480
           SFLFNVGLILLCSISVIQFC+             EIFGHTL+SLRGIKYLYKYNVFQI F
Sbjct: 421 SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF 480

Query: 481 VVLAGLTFVYYAAFGWRRKKPSGRFQLST 509
           V+LAGLTF+YY AFGWRRKK SGRFQLS+
Sbjct: 481 VILAGLTFLYYIAFGWRRKKTSGRFQLSS 509