Miyakogusa Predicted Gene

Lj0g3v0036869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0036869.1 Non Chatacterized Hit- tr|D5A8Z1|D5A8Z1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,56.52,2e-19,seg,NULL; EamA,Drug/metabolite
transporter,NODE_89017_length_778_cov_12.149100.path1.1
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30845.1 | Symbols:  | unknown protein; Has 120 Blast hits to...   108   8e-25

>AT1G30845.1 | Symbols:  | unknown protein; Has 120 Blast hits to
           120 proteins in 67 species: Archae - 0; Bacteria - 0;
           Metazoa - 35; Fungi - 37; Plants - 23; Viruses - 0;
           Other Eukaryotes - 25 (source: NCBI BLink). |
           chr1:10979856-10980427 FORWARD LENGTH=118
          Length = 118

 Score =  108 bits (270), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 78/112 (69%)

Query: 13  NPKGYAWAVSAGFNAALAAISVKLPLHQFVRYGLVLLFNVTMWGCYVNSLKALSSLQATV 72
             +GY  AV+AG NAALAAIS K      ++YGLV++ NV MW CYVNSL+ALSSLQATV
Sbjct: 7   KQRGYISAVAAGLNAALAAISAKFFTSLVIKYGLVVICNVVMWACYVNSLRALSSLQATV 66

Query: 73  TNFATNFISSGLAGFFFFREPLSFQWFXXXXXXXXXXXXXSNSSIKKKVNTD 124
           TNFA NF+SSGLAG F F+E LSF+WF             S SS+ KKV++D
Sbjct: 67  TNFAANFLSSGLAGLFLFQESLSFRWFAGALSITTGVLILSKSSVDKKVSSD 118