Miyakogusa Predicted Gene
- Lj0g3v0036819.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0036819.1 Non Chatacterized Hit- tr|I1K3W7|I1K3W7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9593 PE=,81.77,0,FAMILY
NOT NAMED,NULL; seg,NULL,NODE_22169_length_2288_cov_81.632866.path1.1
(584 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G08810.1 | Symbols: SUB1 | calcium ion binding | chr4:5616204... 756 0.0
AT2G04280.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 519 e-147
AT4G12700.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 501 e-142
AT2G41150.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 84 4e-16
AT3G56750.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 77 4e-14
>AT4G08810.1 | Symbols: SUB1 | calcium ion binding |
chr4:5616204-5617862 REVERSE LENGTH=552
Length = 552
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/574 (68%), Positives = 439/574 (76%), Gaps = 35/574 (6%)
Query: 17 TEPIAQNLIKLISNLCFSLFVFSVLIFTVIAITYQPPDPWLESSPALTNLFTKTENATFH 76
TEPIAQNLIKLISN+CFS+FVF+VLIFTVIA+TYQPPDPWLES+PALT L T+TENATF
Sbjct: 8 TEPIAQNLIKLISNVCFSVFVFTVLIFTVIAVTYQPPDPWLESAPALTKLLTETENATFK 67
Query: 77 IDSSIIKTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFANXXXXXXXXXXXXXXX 136
ID SI+KTGE
Sbjct: 68 IDGSILKTGEDLASSPSSSPPSNSTEQVTEATIEKSEAKIGNMT---------------- 111
Query: 137 XXXXXXXXCD---KTLNCSDPRILIAIQRFNLRAFKSIAFFDYQPPVNGSSLGECDVAWR 193
CD K +NCSDPR+L+A++RFNL+ FKSI F +Y+ PVNGS L ECDV+WR
Sbjct: 112 --VKNSIDCDEDLKIVNCSDPRVLVAVERFNLKVFKSIVFLEYETPVNGSKLDECDVSWR 169
Query: 194 FRNKREKSWRKYRDFRRFKITVTDDCRYKVVHAGGWHSGGNARRS-PTRPSGN--ARGRT 250
FRNK+EKSWR+YRDFRRF+ ++C YKV H GWHSG NARR +RPS + ARG
Sbjct: 170 FRNKKEKSWRRYRDFRRFRFGFGENCTYKVFHTSGWHSGVNARRPRISRPSSSRGARGG- 228
Query: 251 VPRVSTRDEEINDTIPSLGSESNFRNGKYLYYTRGGDYCKGMNHYMWSFLCGLGEAMYLN 310
D EINDTIP+LGS+++FR GKYLYY+RGGDYCKGMN YMWSFLCGLGEAMYLN
Sbjct: 229 -------DSEINDTIPTLGSQTSFRRGKYLYYSRGGDYCKGMNQYMWSFLCGLGEAMYLN 281
Query: 311 RTFVMDLSVCLSSSYNPSNKDEEGKDFRYYFDFEHLKEVSSIVEEAEFLRDWKKWDRTHL 370
RTFVMDLS+CLSSSY+ KDEEGKDFRYYFDFEHLKE +SIVEE EFLRDWKKW+R H
Sbjct: 282 RTFVMDLSLCLSSSYSSKGKDEEGKDFRYYFDFEHLKETASIVEEGEFLRDWKKWNRLH- 340
Query: 371 XXXXXXXXXXXXXXXTPMQLQKDKSTIIMRQFDDAPEPENYWYRVCEGQAAEYIQRPWHA 430
+P+QL KDKSTII RQFD PEPENYWYRVCEGQA++Y++RPWHA
Sbjct: 341 -KRKVPVRKVKTHRVSPLQLSKDKSTIIWRQFD-TPEPENYWYRVCEGQASKYVERPWHA 398
Query: 431 LWKSKRLMNIVTEISGRMDWDFDAVHVVRGEKAQNKELWPHLDADTSPDALAEKLKGMVQ 490
LWKSKRLMNIV+EISG+MDWDFDAVHVVRGEKA+NK+LWPHLDADT PDA+ KLKG+VQ
Sbjct: 399 LWKSKRLMNIVSEISGKMDWDFDAVHVVRGEKAKNKKLWPHLDADTWPDAILTKLKGLVQ 458
Query: 491 PSRNLYIATNEPFYNFFDKLRSNYKVHLLDDYNELWGNASEWYNETRLLNNGKPVEFDGY 550
RNLY+ATNEPFYN+FDKLRS YKVHLLDDY+ LWGN SEWYNET LLNNGKPVEFDGY
Sbjct: 459 VWRNLYVATNEPFYNYFDKLRSQYKVHLLDDYSYLWGNKSEWYNETSLLNNGKPVEFDGY 518
Query: 551 MRVAVDTEVFYRGKTRVETFYNLTRDCKDGVNTC 584
MRVAVDTEVFYRGKTRVETFYNLT DCKDG+NTC
Sbjct: 519 MRVAVDTEVFYRGKTRVETFYNLTTDCKDGINTC 552
>AT2G04280.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes -
6 (source: NCBI BLink). | chr2:1480277-1481983 REVERSE
LENGTH=568
Length = 568
Score = 519 bits (1337), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/577 (45%), Positives = 345/577 (59%), Gaps = 34/577 (5%)
Query: 16 RTEPIAQNLIKLISNLCFSLFVFSVLIFTVIAITYQPPDPWLESSPALTNLFTKTENATF 75
R E + QN + LI N+ FSLFVF VLIFT+IA TY+P DP S +T T T NAT
Sbjct: 13 RAENLGQNALTLIGNIGFSLFVFGVLIFTIIAATYEPEDPLFHPSDKITTFLTSTSNATL 72
Query: 76 HIDSSIIKTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFANXXXXXXXXXXXXXX 135
D S++KTGE F N
Sbjct: 73 RSDDSVVKTGEDFMLANQTAFAE--------------------FININDVEASTNETTTE 112
Query: 136 XXXXXXXXXCDKTLNCSDPRILIAIQRFNLRAFKSIAFFDYQPPVNGS-SLGECDVAWRF 194
+ ++C D ++ + R + FK I F+ + PV G + CD+AWR+
Sbjct: 113 EEGNKLECDVNTPIDCKDQQVFHLMMRATIDKFKDIHFYKFGKPVTGEEGVNSCDMAWRY 172
Query: 195 RNKREKSWRKYRDFRRFKITVTDDCRYKVVHAGGWHSGGNARRSPT-------RPSGNAR 247
R + KS Y+D+RRF + +++C VV G +HSG NAR+ + G
Sbjct: 173 RPRDGKSAAFYKDYRRFVVAKSENCSVSVVGIGEYHSGLNARKRKKNQKAGFEKTGGKKD 232
Query: 248 GRTVPRVSTRDEEINDTIPSLGSESNFRNGKYLYYTRGGDYCKGMNHYMWSFLCGLGEAM 307
++P V E +ND++P + S+S F+ GKYL Y GGD CK MNH++WSFLC LGEA
Sbjct: 233 DFSLPVVG---ELVNDSLPMVESDSVFKTGKYLVYVGGGDRCKSMNHFLWSFLCALGEAQ 289
Query: 308 YLNRTFVMDLSVCLSSSYNPSNKDEEGKDFRYYFDFEHLKEVSSIVEEAEFLRDWKKWDR 367
YLNRT VMDL++CLSS Y S ++EEGKDFR+YFDFEHLKE +S+++EA+F W K +
Sbjct: 290 YLNRTLVMDLTLCLSSIYTSSGQNEEGKDFRFYFDFEHLKEAASVLDEAQFWAQWGKLRK 349
Query: 368 THLXXXXXXXXXXXXXXXTPMQLQKDKSTIIMRQFDDAPEPENYWYRVCEGQAAEYIQRP 427
TPM+L K T+IMR+F + EP+NYWYRVCEG A ++RP
Sbjct: 350 KR--RNRLNLHLVEDFRVTPMKLAAVKDTLIMRKFG-SVEPDNYWYRVCEGDAESVVKRP 406
Query: 428 WHALWKSKRLMNIVTEISGRMDWDFDAVHVVRGEKAQNKELWPHLDADTSPDALAEKLKG 487
WH LWKS+RLM IV+ I+ R++WD+DAVH+ RGEKA+NKE+WP+L+ADTSP AL L+
Sbjct: 407 WHLLWKSRRLMEIVSAIASRLNWDYDAVHIERGEKARNKEVWPNLEADTSPSALLSTLQD 466
Query: 488 MVQPSRNLYIATNEPFYNFFDKLRSNYKVHLLDDYNELWGNASEWYNETRLLNNGKPVEF 547
V+ R+LYIATNE +FF+ L+ Y H L DY +LW +SEWY+ET LN G PVEF
Sbjct: 467 KVEEGRHLYIATNEGELSFFNPLKDKYATHFLYDYKDLWDESSEWYSETTKLNGGNPVEF 526
Query: 548 DGYMRVAVDTEVFYRGKTRVETFYNLTRDCKDGVNTC 584
DGYMR +VDTEVF RGK ++ETF +LT DCKDGV TC
Sbjct: 527 DGYMRASVDTEVFLRGKKQIETFNDLTNDCKDGVGTC 563
>AT4G12700.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G04280.1); Has 136 Blast hits to 136 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes -
11 (source: NCBI BLink). | chr4:7482643-7484328 REVERSE
LENGTH=561
Length = 561
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/575 (44%), Positives = 344/575 (59%), Gaps = 38/575 (6%)
Query: 16 RTEPIAQNLIKLISNLCFSLFVFSVLIFTVIAITYQPPDPWLESSPALTNLFTKTENATF 75
R E + QN + LI ++ FS+ V V++FT+IA TY+P DP S +T T NAT
Sbjct: 14 RPENLGQNAVSLIGSIGFSVLVIGVVVFTIIAATYEPEDPLFHPSDKITTFLTSNSNATL 73
Query: 76 HIDSSIIKTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFANXXXXXXXXXXXXXX 135
D SI+KTGE F N
Sbjct: 74 KSDDSIVKTGEDFMAANQTAFGG--------------------FINIADVETSENDSDGN 113
Query: 136 XXXXXXXXXCDKTL--NCSDPRILIAIQRFNLRAFKSIAFFDYQPPV--NGSSLGECDVA 191
CD + +C DP + + + + FK F+ + PV GSS CD+A
Sbjct: 114 QLD------CDTNIPIDCKDPEVFHLMMKATMEKFKDSHFYKFGKPVIVEGSS-SSCDMA 166
Query: 192 WRFRNKREKSWRKYRDFRRFKITVTDDCRYKVVHAGGWHSGGNARRSPTRPSGNARGRTV 251
WR+R K K+ Y+D+RRF I + +C V+ G +HSG NAR+ N+ G V
Sbjct: 167 WRYRPKDGKAAAFYKDYRRFVIEKSGNCSVSVMGIGEYHSGVNARKRKRPGFRNSSGGKV 226
Query: 252 P--RVSTRDEEINDTIPSLGSESNFRNGKYLYYTRGGDYCKGMNHYMWSFLCGLGEAMYL 309
+ E +ND++P + SE+ F+ G YL Y+ GGD CK MNH++WSFLC LGEA YL
Sbjct: 227 DDFALPVVGEAVNDSLPVVESENVFKEGHYLVYSGGGDRCKSMNHFLWSFLCALGEAQYL 286
Query: 310 NRTFVMDLSVCLSSSYNPSNKDEEGKDFRYYFDFEHLKEVSSIVEEAEFLRDWKKWDRTH 369
NRT VMDL++CLSS Y S ++EEGKDFR+YFDFEHLKE +S++++ +F DW KW + +
Sbjct: 287 NRTLVMDLTLCLSSVYTLSGQNEEGKDFRFYFDFEHLKEAASMLDQVQFWADWGKWYKKN 346
Query: 370 LXXXXXXXXXXXXXXXTPMQLQKDKSTIIMRQFDDAPEPENYWYRVCEGQAAEYIQRPWH 429
TPM+L K T+IMR+F EP+NYWYRVCEG+ +QRPW+
Sbjct: 347 ----GLKLHLVEDFRVTPMKLVDVKDTLIMRKFGTV-EPDNYWYRVCEGETESVVQRPWN 401
Query: 430 ALWKSKRLMNIVTEISGRMDWDFDAVHVVRGEKAQNKELWPHLDADTSPDALAEKLKGMV 489
LWKSKRLM IV+ I+ R++WD+DA+H+ RG+KA+NKE+WP+L+ DTSP ++ L+ +
Sbjct: 402 LLWKSKRLMEIVSAIASRLNWDYDAIHIERGDKARNKEVWPNLEKDTSPSSILSTLQDKI 461
Query: 490 QPSRNLYIATNEPFYNFFDKLRSNYKVHLLDDYNELWGNASEWYNETRLLNNGKPVEFDG 549
+ RNLYIATNEP +FF+ L+ YK H LD++ +LW +SEWY+ET LN G PVEFDG
Sbjct: 462 EQGRNLYIATNEPELSFFNPLKDKYKPHFLDEFKDLWDESSEWYSETTKLNGGNPVEFDG 521
Query: 550 YMRVAVDTEVFYRGKTRVETFYNLTRDCKDGVNTC 584
YMR +VDTEVF RGK ++ETF +LT DC+DG+ TC
Sbjct: 522 YMRASVDTEVFLRGKKQIETFNDLTNDCRDGIGTC 556
>AT2G41150.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G56750.1);
Has 127 Blast hits to 127 proteins in 16 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
| chr2:17153851-17155633 FORWARD LENGTH=404
Length = 404
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 37/312 (11%)
Query: 278 KYLYYT-------RGGDYCKGMNHYMWSFLCGLGEAMYLNRTFVMDLSVCLSSSYNP--- 327
KYLY+ + + C G+ H S C L EAM+LNRTFVM +C++ +N
Sbjct: 69 KYLYWGNRIDCPGKNCETCAGLGHQESSLRCALEEAMFLNRTFVMPSRMCINPIHNKKGI 128
Query: 328 ---SNKDEEGKDFRYY-FDFEHLKEVSSIVEEAEFLRD----WKKWDRTHLXXXXXXXXX 379
SN + + + E L ++ I E+ + D W T +
Sbjct: 129 LNRSNNETREESWEVSSCAMESLYDIDLISEKIPVILDDSETWHIMLSTSMKLKERGSAH 188
Query: 380 XXXXXXTPMQLQKDKSTIIMRQFDDAPEPENYWYRVCEGQAAEY-IQRPWHAL--WKSKR 436
+ D + +++ +P W+ C+ + + P+ L + R
Sbjct: 189 VYGANRHELNDSSDFTNLLLINRTASPLA---WFVECKDRGNRSDVMLPYSFLQTMAASR 245
Query: 437 LMNIVTEISGRMDWDFDAVHVVRGEKAQNKE--------LWPHLDADTSPDALAEKLKGM 488
L + +I ++ D+DA+HV RG+K + ++ +PHLD DT P+ + +++
Sbjct: 246 LRDAAEKIKAKLG-DYDAIHVRRGDKLKTRKDRFRVERSQFPHLDRDTRPEFIIGRIQKQ 304
Query: 489 VQPSRNLYIATNEPFYNFFDKLRSNYKVHLLDDYNELWG----NASEWYNETRLLNNGKP 544
+ P R L+I +NE +FF L YKV +++E+ N + + RL+ G
Sbjct: 305 IPPGRTLFIGSNERTPDFFSPLAIRYKVAYSSNFSEILDPIIENNYQLFMVERLIMMGAK 364
Query: 545 VEFDGYMRVAVD 556
F + D
Sbjct: 365 TFFKTFREYETD 376
>AT3G56750.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes -
11 (source: NCBI BLink). | chr3:21018326-21020192
REVERSE LENGTH=403
Length = 403
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 127/318 (39%), Gaps = 32/318 (10%)
Query: 269 GSESNFRNGKYLYYT-------RGGDYCKGMNHYMWSFLCGLGEAMYLNRTFVMDLSVCL 321
G + + KYLY+ + + C G+ H S C L EAM+LNRTFVM +C+
Sbjct: 60 GKRQHSLSEKYLYWGNRIDCPGKNCETCAGLGHQESSLRCALEEAMFLNRTFVMPSGMCI 119
Query: 322 SSSYNPS-------NKDEEGKDFRYYFDFEHLKEVSSIVEEAE-FLRDWKKWDRTHLXXX 373
+ +N NK E + L ++ I E+ L D K W
Sbjct: 120 NPIHNKKGILNRSDNKTTEEGWLGSSCAMDSLYDIDLISEKIPVILDDSKTWHIVLSTSM 179
Query: 374 XXXXXXXXXXXXTPMQLQKDKSTIIMRQFDDAPEPENYWYRVCEGQA-AEYIQRPWHAL- 431
K+ + + P W+ C+ ++ + P+ L
Sbjct: 180 KLGERGIAHVSGVTRHRLKESHYSNLLIINRTASPLA-WFVECKDRSNRSAVMLPYSFLP 238
Query: 432 -WKSKRLMNIVTEISGRMDWDFDAVHVVRGEKAQNKE--------LWPHLDADTSPDALA 482
+ +L N +I ++ D+DA+HV RG+K + ++ +PHLD DT P+ +
Sbjct: 239 NMAAAKLRNAAEKIKAQLG-DYDAIHVRRGDKLKTRKDRFGVERIQFPHLDRDTRPEFIL 297
Query: 483 EKLKGMVQPSRNLYIATNEPFYNFFDKLRSNYKVHLLDDYNELWG----NASEWYNETRL 538
+++ + R L+I +NE FF L YK+ +++E+ N + + RL
Sbjct: 298 RRIEKRIPRGRTLFIGSNERKPGFFSPLAVRYKLAYSSNFSEILDPIIENNYQLFMMERL 357
Query: 539 LNNGKPVEFDGYMRVAVD 556
+ G F + D
Sbjct: 358 VMMGAKTYFKTFKEYETD 375