Miyakogusa Predicted Gene

Lj0g3v0036669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0036669.1 Non Chatacterized Hit- tr|I1LBN3|I1LBN3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7887
PE=,89.23,0,PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE CATALYTIC
SUBUNIT,NULL; AIR carboxylase,N5-carboxyaminoimid,CUFF.1615.1
         (196 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37690.1 | Symbols:  | phosphoribosylaminoimidazole carboxyla...   224   3e-59
AT2G05140.1 | Symbols:  | phosphoribosylaminoimidazole carboxyla...   183   6e-47

>AT2G37690.1 | Symbols:  | phosphoribosylaminoimidazole carboxylase,
           putative / AIR carboxylase, putative |
           chr2:15806111-15810240 FORWARD LENGTH=642
          Length = 642

 Score =  224 bits (571), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 112/196 (57%), Positives = 138/196 (70%), Gaps = 2/196 (1%)

Query: 1   MRKQRKMGHITIVGTSLGNIESNLATIVERNKFDDKTAVAPNVGIIMGSDSDLPVMKSAA 60
           MRKQRKMGHIT+VG S+G +E  L  I+       +    P V IIMGSD+DLPVMK AA
Sbjct: 437 MRKQRKMGHITLVGQSMGILEQRLQCILSEQSH--QVHETPRVAIIMGSDTDLPVMKDAA 494

Query: 61  EVLEMFGVSHEVRIVSAHRTPELMFSYASSAHDRGVKVIIXXXXXXXHLPGMVAALTPLP 120
           ++L++FGV+HEV+IVSAHRTPE+M++YA+SAH RGV+VII       HLPGMVA+LTPLP
Sbjct: 495 KILDLFGVTHEVKIVSAHRTPEMMYTYATSAHSRGVQVIIAGAGGAAHLPGMVASLTPLP 554

Query: 121 VIGVPVRAXXXXXXXXXXXIVQMPRGVPXXXXXXXXXXXXGLLAVRMLGVANENLLSRMS 180
           VIGVPVRA           IVQMPRGVP             LLAVRMLG+++ +L+SRM 
Sbjct: 555 VIGVPVRATRLDGVDSLLSIVQMPRGVPVATVAINNATNAALLAVRMLGISDTDLVSRMR 614

Query: 181 QYQEDQKESVLIKGDK 196
           QYQED ++  L KG+K
Sbjct: 615 QYQEDMRDENLNKGEK 630


>AT2G05140.1 | Symbols:  | phosphoribosylaminoimidazole carboxylase
           family protein / AIR carboxylase family protein |
           chr2:1853935-1854903 FORWARD LENGTH=162
          Length = 162

 Score =  183 bits (464), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 110/150 (73%)

Query: 47  MGSDSDLPVMKSAAEVLEMFGVSHEVRIVSAHRTPELMFSYASSAHDRGVKVIIXXXXXX 106
           MGSD+DL VMK AA++L+MFGV+HEV+IVSAHRTPE+M++YA+SAH RGV+VII      
Sbjct: 1   MGSDTDLLVMKDAAKILDMFGVTHEVKIVSAHRTPEMMYTYATSAHSRGVQVIIAGAGGA 60

Query: 107 XHLPGMVAALTPLPVIGVPVRAXXXXXXXXXXXIVQMPRGVPXXXXXXXXXXXXGLLAVR 166
            HLPGMVA+LTPLPVIGVPV+A           IVQMPRGVP             LLAVR
Sbjct: 61  AHLPGMVASLTPLPVIGVPVQATRLDGVDSLLSIVQMPRGVPVATVAINNATNAALLAVR 120

Query: 167 MLGVANENLLSRMSQYQEDQKESVLIKGDK 196
           MLG+++ +L+SRM QYQED ++  L KG+K
Sbjct: 121 MLGISDNDLVSRMRQYQEDMRDENLNKGEK 150