Miyakogusa Predicted Gene
- Lj0g3v0036589.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0036589.1 Non Chatacterized Hit- tr|F6HVK5|F6HVK5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,81.94,3e-19,seg,NULL; PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE
ATPASE-SUBUNIT,NULL; no description,Pre-ATP-grasp,gene.g2573.t1.1
(154 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37690.1 | Symbols: | phosphoribosylaminoimidazole carboxyla... 91 2e-19
>AT2G37690.1 | Symbols: | phosphoribosylaminoimidazole carboxylase,
putative / AIR carboxylase, putative |
chr2:15806111-15810240 FORWARD LENGTH=642
Length = 642
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 50/67 (74%)
Query: 87 VHGLSEAXXXXXXXXXXXRMLCQAASKMAIKVMVLDPQENCPASSLSYQHRVGSFDDSAT 146
VHG+SE RMLCQAAS++AIKVM+LDP +NC AS+LSY H V SFDDSAT
Sbjct: 85 VHGVSEKIVGVLGGGQLGRMLCQAASQLAIKVMILDPSKNCSASALSYGHMVDSFDDSAT 144
Query: 147 VEEFAKR 153
VEEFAKR
Sbjct: 145 VEEFAKR 151