Miyakogusa Predicted Gene

Lj0g3v0036439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0036439.1 tr|Q8W197|Q8W197_VIGUN Aminoimidazole
ribonucleotide carboxylase OS=Vigna unguiculata PE=2
SV=1,83.55,0,ATP_GRASP,ATP-grasp fold; ATP-grasp,ATP-grasp fold,
ATP-dependent carboxylate-amine ligase-type; no ,gene.g2566.t1.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37690.1 | Symbols:  | phosphoribosylaminoimidazole carboxyla...   320   4e-88

>AT2G37690.1 | Symbols:  | phosphoribosylaminoimidazole carboxylase,
           putative / AIR carboxylase, putative |
           chr2:15806111-15810240 FORWARD LENGTH=642
          Length = 642

 Score =  320 bits (821), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 163/206 (79%), Positives = 182/206 (88%)

Query: 25  ASNQHGAVSSSNDEVPVHGLSETIVGVLGGGQLGRMLCQAASKMAIKVMVLDPQENCPAS 84
           +S+    +S + +   VHG+SE IVGVLGGGQLGRMLCQAAS++AIKVM+LDP +NC AS
Sbjct: 69  SSHDASPISENRENKHVHGVSEKIVGVLGGGQLGRMLCQAASQLAIKVMILDPSKNCSAS 128

Query: 85  SLSYHHMVGSFDDSATVEEFAKRCGVLTVEIEHVDVDTLEKLEKQGVDCHPKASTIRIIQ 144
           +LSY HMV SFDDSATVEEFAKRCGVLTVEIEHVDVDTLEKLEKQGVDC PKASTIRIIQ
Sbjct: 129 ALSYGHMVDSFDDSATVEEFAKRCGVLTVEIEHVDVDTLEKLEKQGVDCQPKASTIRIIQ 188

Query: 145 DKYQQKVHFSQHGIPLPEFRQIDDLESAKKVGELFGYPLMLKSRRLAYDGRGNAVAKSEE 204
           DKY QKVHFSQHGIPLPEF +I D+E A+K GELFGYPLM+KS+RLAYDGRGNAVA +++
Sbjct: 189 DKYMQKVHFSQHGIPLPEFMEISDIEGARKAGELFGYPLMIKSKRLAYDGRGNAVANNQD 248

Query: 205 ELPSAVDALGGFSRGLYAEKWAPFVK 230
           EL SAV ALGGFSRGLY EKWAPFVK
Sbjct: 249 ELSSAVTALGGFSRGLYIEKWAPFVK 274