Miyakogusa Predicted Gene
- Lj0g3v0036179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0036179.1 Non Chatacterized Hit- tr|I1MV45|I1MV45_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.47,0.00000000000003,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,3674_g.1
(51 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17486.2 | Symbols: | PPPDE putative thiol peptidase family ... 60 3e-10
AT4G17486.1 | Symbols: | PPPDE putative thiol peptidase family ... 60 3e-10
AT5G47310.1 | Symbols: | PPPDE putative thiol peptidase family ... 60 4e-10
AT4G31980.1 | Symbols: | unknown protein; CONTAINS InterPro DOM... 51 2e-07
AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family ... 51 2e-07
AT1G47740.2 | Symbols: | PPPDE putative thiol peptidase family ... 51 2e-07
AT1G47740.1 | Symbols: | PPPDE putative thiol peptidase family ... 51 2e-07
AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family ... 50 4e-07
AT5G25170.1 | Symbols: | PPPDE putative thiol peptidase family ... 49 6e-07
>AT4G17486.2 | Symbols: | PPPDE putative thiol peptidase family
protein | chr4:9750063-9751201 REVERSE LENGTH=199
Length = 199
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 11 ENVEDSNKKNSSMVYLNVYDLTPANNYLYVFGVGIFHSGIE 51
E E S + + VYLNVYDLTP NNYLY FG+GIFHSGIE
Sbjct: 15 ERDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIE 55
>AT4G17486.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr4:9749992-9751201 REVERSE LENGTH=224
Length = 224
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 11 ENVEDSNKKNSSMVYLNVYDLTPANNYLYVFGVGIFHSGIE 51
E E S + + VYLNVYDLTP NNYLY FG+GIFHSGIE
Sbjct: 15 ERDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIE 55
>AT5G47310.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr5:19201325-19202674 FORWARD LENGTH=245
Length = 245
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 3 SLPSSSGSENVEDSNKKNSSMVYLNVYDLTPANNYLYVFGVGIFHSGIE 51
SL S E E + + + + VYLNVYDLTP NNYLY FG+GIFHSGIE
Sbjct: 9 SLCSGEDKEEEEINGEGSLTPVYLNVYDLTPVNNYLYWFGLGIFHSGIE 57
>AT4G31980.1 | Symbols: | unknown protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF247, plant
(InterPro:IPR004158), Protein of unknown function
DUF862, eukaryotic (InterPro:IPR008580); BEST
Arabidopsis thaliana protein match is: Plant protein of
unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967
Blast hits to 1844 proteins in 183 species: Archae - 0;
Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477;
Viruses - 0; Other Eukaryotes - 178 (source: NCBI
BLink). | chr4:15464905-15469204 FORWARD LENGTH=680
Length = 680
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 10 SENVEDSNKKNSSMV--YLNVYDLTPANNYLYVFGVGIFHSGIE 51
NV KKNS V YLNVYDLTP N Y Y G+GI+HSG+E
Sbjct: 3 CRNVSVRRKKNSGTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLE 46
>AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr2:10734187-10735426 FORWARD LENGTH=240
Length = 240
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 12 NVEDSNKKNSSMVYLNVYDLTPANNYLYVFGVGIFHSGIE 51
+V+ + S VYLNVYDLTP N Y Y G+G+FHSG+E
Sbjct: 7 SVKRKKQSGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVE 46
>AT1G47740.2 | Symbols: | PPPDE putative thiol peptidase family
protein | chr1:17567903-17569035 FORWARD LENGTH=279
Length = 279
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 24 VYLNVYDLTPANNYLYVFGVGIFHSGIE 51
VYLNVYDLTP N Y+Y G+GIFHSG+E
Sbjct: 71 VYLNVYDLTPINGYIYWAGLGIFHSGVE 98
>AT1G47740.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr1:17567903-17569035 FORWARD LENGTH=279
Length = 279
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 24 VYLNVYDLTPANNYLYVFGVGIFHSGIE 51
VYLNVYDLTP N Y+Y G+GIFHSG+E
Sbjct: 71 VYLNVYDLTPINGYIYWAGLGIFHSGVE 98
>AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr1:30329283-30330524 REVERSE LENGTH=227
Length = 227
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 7/41 (17%)
Query: 18 KKNSSMV-------YLNVYDLTPANNYLYVFGVGIFHSGIE 51
+KNSS+V YLNVYDLTP N Y Y G+G++HSG+E
Sbjct: 4 RKNSSLVDRGNVPVYLNVYDLTPINGYAYWLGLGVYHSGVE 44
>AT5G25170.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr5:8693257-8694438 FORWARD LENGTH=218
Length = 218
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 16 SNKKNSSMVYLNVYDLTPANNYLYVFGVGIFHSGIE 51
K S VYLNVYDLTP N Y Y G+GI+HSG+E
Sbjct: 12 KKKPGSVPVYLNVYDLTPINGYAYWLGLGIYHSGVE 47