Miyakogusa Predicted Gene

Lj0g3v0035849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0035849.1 tr|I3S150|I3S150_LOTJA Proteasome subunit beta
type OS=Lotus japonicus PE=2
SV=1,98.77,2e-39,PROTEASOME_B_2,Proteasome B-type subunit; N-terminal
nucleophile aminohydrolases (Ntn hydrolases),NU,CUFF.1569.1
         (82 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21720.1 | Symbols: PBC1 | proteasome beta subunit C1 | chr1:...   160   2e-40
AT1G77440.2 | Symbols: PBC2 | 20S proteasome beta subunit C2 | c...   160   2e-40
AT1G77440.1 | Symbols: PBC2 | 20S proteasome beta subunit C2 | c...   160   2e-40
AT3G60820.3 | Symbols: PBF1 | N-terminal nucleophile aminohydrol...    50   3e-07
AT3G60820.1 | Symbols: PBF1 | N-terminal nucleophile aminohydrol...    50   3e-07
AT3G60820.2 | Symbols: PBF1 | N-terminal nucleophile aminohydrol...    50   3e-07

>AT1G21720.1 | Symbols: PBC1 | proteasome beta subunit C1 |
          chr1:7626394-7628070 FORWARD LENGTH=204
          Length = 204

 Score =  160 bits (405), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 74/82 (90%), Positives = 79/82 (96%)

Query: 1  MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDA 60
          MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQRI K+HD++FI LSGLATD 
Sbjct: 1  MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61 QTLYQRLVFRHKLYQLREERDM 82
          QTLYQRLVFRHKLYQLREERDM
Sbjct: 61 QTLYQRLVFRHKLYQLREERDM 82


>AT1G77440.2 | Symbols: PBC2 | 20S proteasome beta subunit C2 |
          chr1:29096020-29098105 FORWARD LENGTH=204
          Length = 204

 Score =  160 bits (405), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 75/82 (91%), Positives = 78/82 (95%)

Query: 1  MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDA 60
          MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQRI K+HD LFI LSGLATD 
Sbjct: 1  MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61 QTLYQRLVFRHKLYQLREERDM 82
          QTLYQRLVFRHKLYQLREERDM
Sbjct: 61 QTLYQRLVFRHKLYQLREERDM 82


>AT1G77440.1 | Symbols: PBC2 | 20S proteasome beta subunit C2 |
          chr1:29096334-29098105 FORWARD LENGTH=204
          Length = 204

 Score =  160 bits (405), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 75/82 (91%), Positives = 78/82 (95%)

Query: 1  MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDA 60
          MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQRI K+HD LFI LSGLATD 
Sbjct: 1  MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61 QTLYQRLVFRHKLYQLREERDM 82
          QTLYQRLVFRHKLYQLREERDM
Sbjct: 61 QTLYQRLVFRHKLYQLREERDM 82


>AT3G60820.3 | Symbols: PBF1 | N-terminal nucleophile
          aminohydrolases (Ntn hydrolases) superfamily protein |
          chr3:22472038-22473809 REVERSE LENGTH=223
          Length = 223

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%)

Query: 2  SIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDAQ 61
          S ++ NG   VA+ G +   IA+D R+      ++ D+ +I K+ D+  ++ SG   D +
Sbjct: 9  SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62 TLYQRLVFRHKLYQLREERDM 82
           L + L  RH +YQ +  + M
Sbjct: 69 ALQKVLKSRHLIYQHQHNKQM 89


>AT3G60820.1 | Symbols: PBF1 | N-terminal nucleophile
          aminohydrolases (Ntn hydrolases) superfamily protein |
          chr3:22472038-22473809 REVERSE LENGTH=223
          Length = 223

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%)

Query: 2  SIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDAQ 61
          S ++ NG   VA+ G +   IA+D R+      ++ D+ +I K+ D+  ++ SG   D +
Sbjct: 9  SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62 TLYQRLVFRHKLYQLREERDM 82
           L + L  RH +YQ +  + M
Sbjct: 69 ALQKVLKSRHLIYQHQHNKQM 89


>AT3G60820.2 | Symbols: PBF1 | N-terminal nucleophile
          aminohydrolases (Ntn hydrolases) superfamily protein |
          chr3:22472038-22473809 REVERSE LENGTH=223
          Length = 223

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%)

Query: 2  SIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDAQ 61
          S ++ NG   VA+ G +   IA+D R+      ++ D+ +I K+ D+  ++ SG   D +
Sbjct: 9  SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62 TLYQRLVFRHKLYQLREERDM 82
           L + L  RH +YQ +  + M
Sbjct: 69 ALQKVLKSRHLIYQHQHNKQM 89