Miyakogusa Predicted Gene
- Lj0g3v0035779.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0035779.1 Non Chatacterized Hit- tr|D8QRP1|D8QRP1_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,28.85,2e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat; PPR:
p,CUFF.1556.1
(441 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 550 e-157
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 138 6e-33
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 9e-31
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 124 1e-28
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 120 2e-27
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 119 3e-27
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 119 5e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 4e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 8e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 4e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 108 7e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 108 9e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 107 2e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 105 4e-23
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 8e-23
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 9e-23
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 104 1e-22
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 5e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 7e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 96 5e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 7e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 90 3e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 7e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 89 8e-18
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 3e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 87 3e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 85 8e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 2e-16
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 3e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 6e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 82 6e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 7e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 82 9e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 75 8e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 9e-14
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 6e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 69 4e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 67 3e-11
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 66 4e-11
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 64 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 64 3e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 63 4e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 61 2e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 61 2e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 57 2e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 57 3e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 56 4e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 55 7e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 55 7e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 55 7e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 53 4e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 52 1e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 52 1e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 51 2e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 550 bits (1417), Expect = e-157, Method: Compositional matrix adjust.
Identities = 253/436 (58%), Positives = 330/436 (75%), Gaps = 7/436 (1%)
Query: 2 NPHHKHLVNQALVAVVKDLPFHAAPSPPS----WTTDAVTAVLRSIARFSFQSHRSMGRQ 57
P +V+Q + A++++ PF A + + WT V+ VL SI RF F S RS+GRQ
Sbjct: 5 QPLCNRIVDQLITAMIQNRPFDAVLASSTVAKPWTQQLVSDVLHSIPRFFFISPRSIGRQ 64
Query: 58 NGFRHRTPLRQRNLNDEHRKLHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFT 117
GFRHR+PL+QRNL+DE ++ +L+LGP AY DP +V +GL+K+LEFF W+E H GF
Sbjct: 65 KGFRHRSPLKQRNLSDESQRRRSEVLVLGPGAYMDPKKVSIGLQKALEFFFWIETHFGFD 124
Query: 118 HDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLA 177
H+E+TCR+MAC+L + N K LW FL++ + + + N +TTA+ITCL+K LGE+G
Sbjct: 125 HNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGK---NVVTTASITCLMKCLGEEGFV 181
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA TFYRMK+YHC+PD+ AYNT+I ALCRVGNF +A+FLL+QM+LPGF PPD +TYT
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
ILISSYCR+G+ TGCRKA RRR++EA R+FR MLF+GFVPDVVTYN LIDGCCKT RI R
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
ALELFEDMK KGC PN+VTY+S IRYYS TNEI+ A+E++R M++L HG+P SS+YTP+I
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLI 361
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
HAL E R AEA +VE+V+ G VPREYTY+LVCD L G L +E+H+R++ G++
Sbjct: 362 HALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Query: 418 KRYKQTMMVKPVMTRK 433
+RY + M +KP M RK
Sbjct: 422 QRYSRVMKIKPTMARK 437
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 154/303 (50%), Gaps = 31/303 (10%)
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
N R + T LIK ++G +A + M ++ P + Y +LI+++C+ GN
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
RA L+QM + G CP + TYT L+ + + G + EA R+ R M
Sbjct: 362 NRAMEFLDQMRVRGL-CPNER-TYTTLVDGFSQKGYMN-----------EAYRVLREMND 408
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
GF P VVTYNALI+G C T +++ A+ + EDMK+KG +P+ V+Y +++ + + ++D
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 333 AVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
A+ V R+M + GI P + +Y+ +I CE R EA E++ G P E+TY +
Sbjct: 469 ALRVKREM--VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 392 CDKLCLAG-------------EDGLLGDEV-HERIKNGMRKRYKQTMMVKPVMTRKGYPE 437
+ C+ G E G+L D V + + NG+ K+ +T K ++ + Y E
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ-SRTREAKRLLLKLFYEE 585
Query: 438 IEP 440
P
Sbjct: 586 SVP 588
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S A F M + P++ YN LI C GN A L ++ME G C P+ TY
Sbjct: 187 SFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG--CLPNVVTYN 244
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
LI YC+ R++ + +L R M KG P++++YN +I+G C+ R++
Sbjct: 245 TLIDGYCK-----------LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPI 356
+ +M ++G + + VTY++LI+ Y +A+ + +M R HG+ PS +YT +
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR--HGLTPSVITYTSL 351
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
IH++C+AG + A FL ++ G P E TY + D G
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 179 EASLTFY-RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+ +LT + +M+ C P++ YNTLI C++ LL M L G P+ +Y
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL--EPNLISYN 279
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++I+ CR G R+ E + M +G+ D VTYN LI G CK +
Sbjct: 280 VVINGLCREG-----------RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
AL + +M + G P+ +TY SLI ++RA+E L D R+ P+ +YT ++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL-DQMRVRGLCPNERTYTTLV 387
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG-------------EDGLL 404
+ G + EA+ L E+ D G P TY + + C+ G E GL
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 405 GDEV-HERIKNGMRKRY--KQTMMVKPVMTRKG 434
D V + + +G + Y + + VK M KG
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 180 ASLTFYRMKQYH--CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
ASL F +++ + C ++ ++ + R+ +A ++ + GF P +Y
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFM--PGVLSYN 173
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++ + R ++R + A +F+ ML P+V TYN LI G C I
Sbjct: 174 AVLDATIR----------SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
AL LF+ M+ KGC PN VTY++LI Y +ID ++LR M L P+ SY +I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA-LKGLEPNLISYNVVI 282
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ LC GR+ E L E+ G E TY + C G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 104/285 (36%), Gaps = 68/285 (23%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T + LI+ EQ EA + M + PD Y LI A C G+ +A L
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 221 QMELPGFWCPPDAFTYTILI--------------------------SSYCRHGILTGCRK 254
+M G PD TY++LI S H ++ C
Sbjct: 545 EMVEKGVL--PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 255 -------------ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALEL 301
+ + EA ++F ML K PD YN +I G C+ I++A L
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 302 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHAL- 360
+++M K G + VT +L++ +++ V I+H L
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV-------------------IVHVLR 703
Query: 361 -CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLL 404
CE AE LVE+ RE +V D L +DG L
Sbjct: 704 SCELSE-AEQAKVLVEINH-----REGNMDVVLDVLAEMAKDGFL 742
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 122/247 (49%), Gaps = 18/247 (7%)
Query: 155 RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR 214
RN T + LI + ++G EA + M PD YN+LI C+
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
A + + M G C PD TY+ILI+SYC+ +R+ + RLFR + KG
Sbjct: 369 ANQMFDLMVSKG--CEPDIVTYSILINSYCKA-----------KRVDDGMRLFREISSKG 415
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
+P+ +TYN L+ G C++ ++ A ELF++M +G P+ VTY L+ E+++A+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 335 EVLRDMQ--RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
E+ MQ R+ GI Y IIH +C A +V +AWS L D G P TY ++
Sbjct: 476 EIFEKMQKSRMTLGI---GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 393 DKLCLAG 399
LC G
Sbjct: 533 GGLCKKG 539
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 20/286 (6%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
GF DEVT + L ++ + ++ RN + + +I L +
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKM------EERNIKASVVQYSIVIDSLCKD 258
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
G +A F M+ + D+ Y++LI LC G + +L +M G PD
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVV 316
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
T++ LI + + G +L EA L+ M+ +G PD +TYN+LIDG CK
Sbjct: 317 TFSALIDVFVKEG-----------KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 354
+ A ++F+ M KGC P+ VTY LI Y +D + + R++ IP++ +Y
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIPNTITYN 424
Query: 355 PIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ C++G++ A E+V G P TY ++ D LC GE
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 14/246 (5%)
Query: 171 LGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP 230
L + G ++ A F +M++ + + + Y+ +I +LC+ G+F A L +ME+ G
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI--K 277
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
D TY+ LI C G + + ++ R M+ + +PDVVT++ALID
Sbjct: 278 ADVVTYSSLIGGLCNDG-----------KWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS 350
K ++ A EL+ +M +G AP+ +TY+SLI + N + A ++ D+ P
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDI 385
Query: 351 SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHE 410
+Y+ +I++ C+A RV + E+ G +P TY + C +G+ + E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 411 RIKNGM 416
+ G+
Sbjct: 446 MVSRGV 451
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T + L+ +G SEA RM + RPD+ +TLI LC G + A L++
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M GF PD TY +++ C+ G A LFR M + VV
Sbjct: 200 RMVEYGF--QPDEVTYGPVLNRLCKSG-----------NSALALDLFRKMEERNIKASVV 246
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
Y+ +ID CK AL LF +M+ KG + VTY SLI + D ++LR+M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
N IP +++ +I + G++ EA E++ G P TY + D C
Sbjct: 307 IGRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC- 252
P+ YNTL+ C+ G AK L ++M G PP TY IL+ C +G L
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV--PPSVVTYGILLDGLCDNGELNKAL 475
Query: 253 ---RKATRRRLY--------------------EAGRLFRLMLFKGFVPDVVTYNALIDGC 289
K + R+ +A LF + KG PDVVTYN +I G
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
CK + A LF MK+ GC P+ TY+ LIR + + + +VE++ +M+ S
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Query: 350 SS 351
S+
Sbjct: 596 ST 597
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD T++ L++ +C G R+ EA L M+ PD+VT + LI+G C
Sbjct: 138 PDTITFSTLVNGFCLEG-----------RVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS 350
R+ AL L + M + G P+ VTY ++ + A+++ R M+ N S
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK-ASV 245
Query: 351 SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG--EDG 402
Y+ +I +LC+ G +A S E+ G TY + LC G +DG
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 102/251 (40%), Gaps = 49/251 (19%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M Q P +N L A+ R + + MEL G D +T TI+I+ Y
Sbjct: 58 FESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI--EHDMYTMTIMINCY 115
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
CR +K GR ++L G+ PD +T++ L++G C R+ A+ L
Sbjct: 116 CR-------KKKLLFAFSVLGRAWKL----GYEPDTITFSTLVNGFCLEGRVSEAVAL-- 162
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
+DR VE+ QR P + + +I+ LC
Sbjct: 163 --------------------------VDRMVEM---KQR-----PDLVTVSTLINGLCLK 188
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQT 423
GRV+EA + +V+ G P E TY V ++LC +G L D + + ++ Q
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 424 MMVKPVMTRKG 434
+V + + G
Sbjct: 249 SIVIDSLCKDG 259
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 128/267 (47%), Gaps = 29/267 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T +++ L + G +A RM Q C PD+ Y LI A CR A LL+
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGIL------------TGCR------------KAT 256
+M G C PD TY +L++ C+ G L +GC+ +
Sbjct: 264 EMRDRG--CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
R +A +L ML KGF P VVT+N LI+ C+ + RA+++ E M + GC PN ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVE 375
Y+ L+ + ++DRA+E L M ++ G P +Y ++ ALC+ G+V +A L +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERM--VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 376 LVDGGNVPREYTYRLVCDKLCLAGEDG 402
L G P TY V D L AG+ G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTG 466
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 16/241 (6%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ T LI L +GL A +M Q+ C+P+ +YN L++ C+ RA L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E+M G C PD TY ++++ C+ G ++ +A + + KG P +
Sbjct: 403 ERMVSRG--CYPDIVTYNTMLTALCKDG-----------KVEDAVEILNQLSSKGCSPVL 449
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+TYN +IDG K + +A++L ++M+ K P+ +TY SL+ S ++D A++ +
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+R+ GI P++ ++ I+ LC++ + A FLV +++ G P E +Y ++ + L
Sbjct: 510 FERM--GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 399 G 399
G
Sbjct: 568 G 568
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 28/249 (11%)
Query: 179 EASLTFYRMKQYHCR-PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
E F YH PDI TLI CR+G +A +LE +E G PD TY
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE--GSGAVPDVITYN 176
Query: 238 ILISSYCRHGILTGCRKATRR---------------------RLYEAGRLFRLMLFKGFV 276
++IS YC+ G + R +L +A + ML +
Sbjct: 177 VMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
PDV+TY LI+ C+ + A++L ++M+ +GC P+ VTY+ L+ +D A++
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
L DM + P+ ++ I+ ++C GR +A L +++ G P T+ ++ + LC
Sbjct: 297 LNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 397 LAGEDGLLG 405
GLLG
Sbjct: 356 ---RKGLLG 361
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T L+ + ++G EA M C+P++ +N ++ ++C G + A+ LL
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILT------------GCRKAT------------ 256
M GF P T+ ILI+ CR G+L GC+ +
Sbjct: 334 DMLRKGF--SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
+++ A M+ +G PD+VTYN ++ CK +++ A+E+ + KGC+P +T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y+++I + + +A+++L +M R P + +Y+ ++ L G+V EA F E
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 377 VDGGNVPREYTYRLVCDKLC 396
G P T+ + LC
Sbjct: 511 ERMGIRPNAVTFNSIMLGLC 530
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
L E + M++ G VPD++ LI G C+ + ++A ++ E ++ G P+ +TY+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
+I Y EI+ A+ VL M P +Y I+ +LC++G++ +A L ++
Sbjct: 178 MISGYCKAGEINNALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 380 GNVPREYTYRLVCDKLC 396
P TY ++ + C
Sbjct: 234 DCYPDVITYTILIEATC 250
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 141/293 (48%), Gaps = 22/293 (7%)
Query: 108 RWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCL 167
R VE +GF +EVT + V+ ++ T L++ RN + + +
Sbjct: 218 RMVE--TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM------EERNIKLDAVKYSII 269
Query: 168 IKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGF 227
I L + G A F M+ + DI YNTLI C G + LL M
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 228 WCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALID 287
P+ T+++LI S+ + G +L EA +L + M+ +G P+ +TYN+LID
Sbjct: 330 --SPNVVTFSVLIDSFVKEG-----------KLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 288 GCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI 347
G CK R++ A+++ + M KGC P+ +T++ LI Y N ID +E+ R+M L I
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS-LRGVI 435
Query: 348 PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ +Y ++ C++G++ A E+V P +Y+++ D LC GE
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T + LI ++G EA M Q P+ YN+LI C+ A +++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M G C PD T+ ILI+ YC+ R+ + LFR M +G + + V
Sbjct: 393 LMISKG--CDPDIMTFNILINGYCKAN-----------RIDDGLELFREMSLRGVIANTV 439
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN L+ G C++ +++ A +LF++M + P+ V+Y L+ E+++A+E+ +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 341 QR----LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
++ L+ GI Y IIH +C A +V +AW L G Y ++ +LC
Sbjct: 500 EKSKMELDIGI-----YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T+ L+ L G S+A + RM + +P+ Y ++ +C+ G A A LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ME DA Y+I+I C+ G L A LF M KGF D+
Sbjct: 252 RKMEERNI--KLDAVKYSIIIDGLCKDG-----------SLDNAFNLFNEMEIKGFKADI 298
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+TYN LI G C R +L DM K+ +PN VT+ LI + ++ A ++L++
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
M + GI P++ +Y +I C+ R+ EA + ++ G P T+ ++ + C A
Sbjct: 359 M--MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 399 G--EDGL 403
+DGL
Sbjct: 417 NRIDDGL 423
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 44/276 (15%)
Query: 172 GEQGLASEASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP 230
G G+ ++ ++ +R M Q P + +N L A+ + + L +QME G
Sbjct: 63 GLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI--A 120
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRR------------------------------RL 260
+T +I+I+ +CR CRK + R+
Sbjct: 121 HSIYTLSIMINCFCR------CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 261 YEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
EA L M+ G P ++T N L++G C ++ A+ L + M + G PN VTY +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ + + A+E+LR M+ N + + Y+ II LC+ G + A++ E+ G
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 381 NVPREYTYRLVCDKLCLAG--EDG--LLGDEVHERI 412
TY + C AG +DG LL D + +I
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T L++ + G A F M RPDI +Y L+ LC G +A +
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++E D Y I+I C ++ +A LF + KG D
Sbjct: 498 KIEKSKM--ELDIGIYMIIIHGMCNAS-----------KVDDAWDLFCSLPLKGVKLDAR 544
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
YN +I C+ + +A LF M ++G AP+ +TY+ LIR + ++ A E++ +M
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+ + G P+ S ++ + +G + +++
Sbjct: 605 K--SSGFPADVSTVKMVINMLSSGELDKSF 632
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 116/247 (46%), Gaps = 17/247 (6%)
Query: 147 ANKHHNNHRNN--PITTATITCLIKLLGEQGLASEASL-TFYRMKQYHCRPDIRAYNTLI 203
A K + N R P T A++ LIK L +A L F M + C PD Y TLI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 204 YALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEA 263
LCR G AK L +M C P TYT LI+ C + + EA
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKD--CAPTVVTYTSLINGLCGS-----------KNVDEA 246
Query: 264 GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
R M KG P+V TY++L+DG CK R +A+ELFE M +GC PN VTY +LI
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 324 YSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
+I AVE+L D L P + Y +I C + EA +FL E++ GG P
Sbjct: 307 LCKEQKIQEAVELL-DRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 384 REYTYRL 390
T+ +
Sbjct: 366 NRLTWNI 372
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARA 215
+P A +T L L+ E L + FY+ M++ P + + N LI ALCR A
Sbjct: 118 DPSQKAYVTVLAILVEENQL--NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
+ +E+P C PD++TY LIS CR G R+ EA +LF M+ K
Sbjct: 176 GLKI-FLEMPKRGCDPDSYTYGTLISGLCRFG-----------RIDEAKKLFTEMVEKDC 223
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
P VVTY +LI+G C + + A+ E+MK KG PN TY SL+ +A+E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 336 VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNV 382
L +M P+ +YT +I LC+ ++ EA VEL+D N+
Sbjct: 284 -LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA----VELLDRMNL 325
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 25/316 (7%)
Query: 85 LGPAAYRDPHRVDLGLRKSLEFFRWVEAH--SGFTHDEVTCREMACVLVRANATKTLWGF 142
+ P+ R + + KS+ F A +G+ HD+ + M LV AN K
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTL 202
+ N ++ + + + G ++ F++MK + C P +AY T+
Sbjct: 74 IVRM------KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTV 127
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE 262
+ L A + M G PP + +LI + CR+ +
Sbjct: 128 LAILVEENQLNLAFKFYKNMREIGL--PPTVASLNVLIKALCRND-----------GTVD 174
Query: 263 AG-RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
AG ++F M +G PD TY LI G C+ RI A +LF +M +K CAP VTY SLI
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ +D A+ L +M+ + GI P+ +Y+ ++ LC+ GR +A ++ G
Sbjct: 235 NGLCGSKNVDEAMRYLEEMK--SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 381 NVPREYTYRLVCDKLC 396
P TY + LC
Sbjct: 293 CRPNMVTYTTLITGLC 308
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 53/265 (20%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI L G EA F M + C P + Y +LI LC N A LE+M+ G
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
P+ FTY+ L+ C+ G R +A LF +M+ +G P++VTY LI
Sbjct: 258 I--EPNVFTYSSLMDGLCKDG-----------RSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM------ 340
G CK +IQ A+EL + M +G P+ Y +I + A ++ A L +M
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 341 -QRLNHGI----------------PSSS-----------------SYTPIIHALCEAGRV 366
RL I PS + + ++ LC+ G
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424
Query: 367 AEAWSFLVELVDGGNVPREYTYRLV 391
+A + E+V G +P + T++L+
Sbjct: 425 QKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 39/213 (18%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + L+ L + G + +A F M CRP++ Y TLI LC+ A LL++M
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 223 ELPGFWCPPDAFTYTILISSYC------------RHGILTGCRKATRRRL---------- 260
L G PDA Y +IS +C IL G T RL
Sbjct: 324 NLQGL--KPDAGLYGKVISGFCAISKFREAANFLDEMILGG---ITPNRLTWNIHVKTSN 378
Query: 261 -----------YEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG 309
A L+ M +G +V T +L+ CK Q+A++L +++ G
Sbjct: 379 EVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDG 438
Query: 310 CAPNRVTYDSLIRYYSATNEIDRAVE-VLRDMQ 341
C P++ T+ LI + + A + +LRD+
Sbjct: 439 CIPSKGTWKLLIGHTLDKTIVGEASDTLLRDLD 471
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 23/308 (7%)
Query: 101 RKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
+ + +FF+W +GF H + +A +L A LKE + + +
Sbjct: 123 KLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLW 182
Query: 161 TATITC---------LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN 211
+ C L +L + G+ EA F +MK++ P R+ N L++ ++G
Sbjct: 183 STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGK 242
Query: 212 FARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLML 271
K + M G P FTY I+I C+ G + R LF M
Sbjct: 243 TDDVKRFFKDMIGAG--ARPTVFTYNIMIDCMCKEGDVEAARG-----------LFEEMK 289
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
F+G VPD VTYN++IDG K R+ + FE+MK C P+ +TY++LI + ++
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 332 RAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
+E R+M+ N P+ SY+ ++ A C+ G + +A F V++ G VP EYTY +
Sbjct: 350 IGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 392 CDKLCLAG 399
D C G
Sbjct: 409 IDANCKIG 416
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T +I G+ G + F MK C PD+ YN LI C+ G
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRK--ATRRR------------------- 259
+M+ G P+ +Y+ L+ ++C+ G++ K RR
Sbjct: 357 EMKGNGL--KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 260 ---LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
L +A RL ML G +VVTY ALIDG C R++ A ELF M G PN +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVE 375
Y++LI + +DRA+E+L +++ GI P Y I LC ++ A + E
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELK--GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 376 LVDGGNVPREYTYRLVCDKLCLAGE--DGL-LGDEVHE 410
+ + G Y + D +G +GL L DE+ E
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 21/247 (8%)
Query: 152 NNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN 211
N + N ++ +T L+ ++G+ +A + M++ P+ Y +LI A C++GN
Sbjct: 361 NGLKPNVVSYST---LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 212 FARAKFLLEQMELPGF-WCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM 270
+ A L +M G W + TYT LI C R+ EA LF M
Sbjct: 418 LSDAFRLGNEMLQVGVEW---NVVTYTALIDGLC-----------DAERMKEAEELFGKM 463
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
G +P++ +YNALI G K + RALEL ++K +G P+ + Y + I + +I
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 331 DRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
+ A V+ +M+ GI ++S YT ++ A ++G E L E+ + T+
Sbjct: 524 EAAKVVMNEMKEC--GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581
Query: 390 LVCDKLC 396
++ D LC
Sbjct: 582 VLIDGLC 588
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 28/225 (12%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+K +PD+ Y T I+ LC + AK ++ +M+ G ++ YT L+ +Y +
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI--KANSLIYTTLMDAYFK 554
Query: 246 HG--------------------ILTGC----RKATRRRLYEAGRLF-RLMLFKGFVPDVV 280
G ++T C + + +A F R+ G +
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
+ A+IDG CK +++ A LFE M +KG P+R Y SL+ + A+ + M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
+ + +YT ++ L ++ +A SFL E++ G P E
Sbjct: 675 AEIGMKL-DLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 24/243 (9%)
Query: 128 CVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRM 187
C L + A K + +KE K N+ I T + K G +E M
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKA-----NSLIYTTLMDAYFK----SGNPTEGLHLLDEM 568
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG 247
K+ + + LI LC+ ++A ++ F +A +T +I C+
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTAMIDGLCKD- 626
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
++ A LF M+ KG VPD Y +L+DG K + AL L + M +
Sbjct: 627 ----------NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRV 366
G + + Y SL+ S N++ +A L +M + GI P ++ E G +
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM--IGEGIHPDEVLCISVLKKHYELGCI 734
Query: 367 AEA 369
EA
Sbjct: 735 DEA 737
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 14/179 (7%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQ-YHCRPDIRAYNTLIYALCRVGNFARAKF 217
+T T LI L + L S+A F R+ + + + + +I LC+ A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
L EQM G PD YT L+ + G + EA L M G
Sbjct: 635 LFEQMVQKGL--VPDRTAYTSLMDGNFKQG-----------NVLEALALRDKMAEIGMKL 681
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
D++ Y +L+ G ++Q+A E+M +G P+ V S+++ + ID AVE+
Sbjct: 682 DLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 145/337 (43%), Gaps = 54/337 (16%)
Query: 114 SGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGE 173
+GF D+ T R + L T E K + N I T LIK L
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK---GIKPNVILYNT---LIKGLSN 403
Query: 174 QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDA 233
QG+ EA+ M + P+++ +N L+ LC++G + A L++ M G++ PD
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF--PDI 461
Query: 234 FTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTY 293
FT+ ILI Y +T+ ++ A + +ML G PDV TYN+L++G CKT
Sbjct: 462 FTFNILIHGY-----------STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 294 RIQRALELFEDMKKKGCAPN-----------------------------------RVTYD 318
+ + +E ++ M +KGCAPN VT+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
+LI + ++D A + R M+ S+ +Y IIHA E V A E+VD
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 379 GGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
P YTYRL+ D C G L + E ++NG
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+PD+ YN LIY LC+ F A+ L +M G PD++TY LI+ YC+ G++
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL--EPDSYTYNTLIAGYCKGGMVQ-- 338
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
A R+ +F GFVPD TY +LIDG C RAL LF + KG P
Sbjct: 339 ---------LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
N + Y++LI+ S I A ++ +M IP ++ +++ LC+ G V++A
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGL-IPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 373 LVELVDGGNVPREYTYRLV 391
+ ++ G P +T+ ++
Sbjct: 449 VKVMISKGYFPDIFTFNIL 467
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 33/246 (13%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA + +M PD YNTLI C+ G A+ ++ GF PD FTY
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV--PDQFTYR 360
Query: 238 ILISSYCRHG--------------------------ILTGCRKATRRRLYEAGRLFRLML 271
LI C G ++ G + + + EA +L M
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL--SNQGMILEAAQLANEMS 418
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
KG +P+V T+N L++G CK + A L + M KG P+ T++ LI YS +++
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 332 RAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRL 390
A+E+L M L++G+ P +Y +++ LC+ + + +V+ G P +T+ +
Sbjct: 479 NALEILDVM--LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 391 VCDKLC 396
+ + LC
Sbjct: 537 LLESLC 542
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 139/339 (41%), Gaps = 34/339 (10%)
Query: 102 KSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITT 161
K+LE F + GF H T R ++ + ++E N N+ +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRS----VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEG 77
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
+ + K G +G EA F RM Y C P + +YN ++ L G F +A + +
Sbjct: 78 VYVGAM-KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 222 MELPGFWCPPDAFTYTILISSYCR----HGIL--------TGCRK------ATRRRLYEA 263
M G PD +++TI + S+C+ H L GC YE
Sbjct: 137 MRDRGI--TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 264 G------RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
LF ML G + T+N L+ CK ++ +L + + K+G PN TY
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+ I+ E+D AV ++ + + G P +Y +I+ LC+ + EA +L ++
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCL--IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 377 VDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
V+ G P YTY + C G L V + + NG
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 17/242 (7%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
E+ +E F +M + +N L+ LC+ G+ + LL+++ G P+
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL--PN 250
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
FTY + I C+ G L G A R+ ++ +G PDV+TYN LI G CK
Sbjct: 251 LFTYNLFIQGLCQRGELDG-----------AVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
+ Q A M +G P+ TY++LI Y + A ++ D N +P +
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD-AVFNGFVPDQFT 358
Query: 353 YTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG---EDGLLGDEVH 409
Y +I LC G A + E + G P Y + L G E L +E+
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 410 ER 411
E+
Sbjct: 419 EK 420
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 96/236 (40%), Gaps = 52/236 (22%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD+ YN+L+ LC+ F + M G C P+ FT+ IL+ S CR+
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG--CAPNLFTFNILLESLCRY------- 544
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT------YRIQRALE------- 300
R+L EA L M K PD VT+ LIDG CK Y + R +E
Sbjct: 545 ----RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600
Query: 301 -----------------------LFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
LF++M + P+ TY ++ + T ++ + L
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 338 RDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+M N IPS ++ +I+ LC RV EA + +V G VP +CD
Sbjct: 661 LEMME-NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE--AVNTICD 713
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 20/178 (11%)
Query: 140 WGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQ-YHCRPDIRA 198
G L+E NK N T LI + G A F +M++ Y
Sbjct: 551 LGLLEEMKNKSVNPD------AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR 258
YN +I+A N A+ L ++M PD +TY +++ +C+ TG +
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEM--VDRCLGPDGYTYRLMVDGFCK----TGNVNLGYK 658
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
L E M+ GF+P + T +I+ C R+ A + M +KG P V
Sbjct: 659 FLLE-------MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 130/287 (45%), Gaps = 47/287 (16%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ L + G A M Q PD+ YN++I LC++G A +L+QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
C P+ TY LIS+ C+ ++ EA L R++ KG +PDV T+
Sbjct: 357 ITRD--CSPNTVTYNTLISTLCKEN-----------QVEEATELARVLTSKGILPDVCTF 403
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ- 341
N+LI G C T + A+ELFE+M+ KGC P+ TY+ LI + ++D A+ +L+ M+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 342 ------------------RLN--------------HGIP-SSSSYTPIIHALCEAGRVAE 368
+ N HG+ +S +Y +I LC++ RV +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 369 AWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
A + +++ G P +YTY + C G+ D V NG
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 14/190 (7%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M+ C PD YN LI +LC G A +L+QMEL G C TY LI +
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG--CARSVITYNTLIDGF 480
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C KA + R EA +F M G + VTYN LIDG CK+ R++ A +L +
Sbjct: 481 C---------KANKTR--EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M +G P++ TY+SL+ ++ +I +A ++++ M N P +Y +I LC+A
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKA 588
Query: 364 GRVAEAWSFL 373
GRV A L
Sbjct: 589 GRVEVASKLL 598
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 17/240 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA-KFLLEQ 221
T T +++ E+G A +M ++ C + N +++ C+ G A F+ E
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
GF+ PD +T+ L++ C+ G + A + +ML +G+ PDV T
Sbjct: 286 SNQDGFF--PDQYTFNTLVNGLCKAG-----------HVKHAIEIMDVMLQEGYDPDVYT 332
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YN++I G CK ++ A+E+ + M + C+PN VTY++LI N+++ A E+ R +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 342 RLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ GI P ++ +I LC A E+ G P E+TY ++ D LC G+
Sbjct: 393 --SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 30/239 (12%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M + +PD+ +N LI ALCR A +LE M P + PD T+T ++ Y
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM--PSYGLVPDEKTFTTVMQGYIE 236
Query: 246 HGILTGCRKATRRRLYE-------------------AGRLFRLMLF-------KGFVPDV 279
G L G + R ++ E GR+ + F GF PD
Sbjct: 237 EGDLDGALR-IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
T+N L++G CK ++ A+E+ + M ++G P+ TY+S+I E+ AVEVL
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
M + P++ +Y +I LC+ +V EA L G +P T+ + LCL
Sbjct: 356 MITRDCS-PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA F M+ + + YNTLI LC+ A L++QM + G PD +TY
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG--QKPDKYTYNS 545
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
L++ +CR G + +A + + M G PD+VTY LI G CK R++ A
Sbjct: 546 LLTHFCRGG-----------DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+L ++ KG Y+ +I+ + A+ + R+M N P + SY +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 359 ALCEAGR-VAEAWSFLVELVDGGNVPR-EYTYRLVCDKLCLAGEDGLLGDEVHERIKNGM 416
LC G + EA FLVEL++ G VP Y L L L+ E+ L+ ++ +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLV--KLVNMVMQKA 712
Query: 417 RKRYKQTMMVKPVMTRKGYPE 437
R ++ MVK ++ + + +
Sbjct: 713 RFSEEEVSMVKGLLKIRKFQD 733
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
Query: 161 TATITCLIKLLGEQGLASEA-SLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T+T LI+ + L E S+ + + ++ +PD YN ++ L + +
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+M + G PD T+ +LI + CR +L A + M G VPD
Sbjct: 178 AKMSVWGI--KPDVSTFNVLIKALCRA-----------HQLRPAILMLEDMPSYGLVPDE 224
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
T+ ++ G + + AL + E M + GC+ + V+ + ++ + ++ A+ +++
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M + P ++ +++ LC+AG V A + ++ G P YTY V LC G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 400 E 400
E
Sbjct: 345 E 345
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 152/330 (46%), Gaps = 37/330 (11%)
Query: 97 DLG-LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHR 155
DLG + +++ FR H F C + +++ N T T+WGF E +
Sbjct: 182 DLGFIPDAIQCFRLSRKHR-FDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGF---- 236
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
P+ L+ ++G S+A F + + +P + ++NTLI C+VGN
Sbjct: 237 --PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR----KATRRRLYEAGRLF---- 267
L QME PD FTY+ LI++ C+ + G + +R L +F
Sbjct: 295 FRLKHQMEKS--RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 268 ----------------RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
+ ML KG PD+V YN L++G CK + A + + M ++G
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAW 370
P+++TY +LI + +++ A+E+ ++M + +GI ++ ++ +C+ GRV +A
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQ--NGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 371 SFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
L E++ G P + TY ++ D C G+
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 35/255 (13%)
Query: 172 GEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPP 231
GE L E ++ +M +PDI YNTL+ C+ G+ A+ +++ M G P
Sbjct: 359 GEIDLMKE---SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR--P 413
Query: 232 DAFTYTILISSYCRHGILTG------------------------CRKATRRRLYEAGRLF 267
D TYT LI +CR G + C R+ +A R
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 268 RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
R ML G PD VTY ++D CK Q +L ++M+ G P+ VTY+ L+
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 328 NEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREY 386
++ A +L M LN G +P +Y ++ R A + ++ + G V
Sbjct: 534 GQMKNADMLLDAM--LNIGVVPDDITYNTLLEG---HHRHANSSKRYIQKPEIGIVADLA 588
Query: 387 TYRLVCDKLCLAGED 401
+Y+ + ++L A +D
Sbjct: 589 SYKSIVNELDRASKD 603
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 123/243 (50%), Gaps = 18/243 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + LI L G S+AS M + P++ +N+LI A + G A+ L ++M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
P+ TY LI+ +C H RL EA ++F LM+ K +PDVVTY
Sbjct: 337 IQRSI--DPNIVTYNSLINGFCMH-----------DRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LI+G CK ++ +ELF DM ++G N VTY +LI + ++ D A V + Q
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK--QM 441
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG-- 399
++ G+ P+ +Y ++ LC+ G++ +A L P YTY ++ + +C AG
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 400 EDG 402
EDG
Sbjct: 502 EDG 504
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 16/245 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T L+ L + ASEA RM C+PD+ Y +I LC+ G A LL
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ME D Y+ +I S C++ R + +A LF M KG PDV
Sbjct: 230 KMEKGKI--EADVVIYSTVIDSLCKY-----------RHVDDALNLFTEMDNKGIRPDVF 276
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY++LI C R A L DM ++ PN VT++SLI ++ ++ A ++ +M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ + P+ +Y +I+ C R+ EA +V +P TY + + C A +
Sbjct: 337 IQRSID-PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 401 --DGL 403
DG+
Sbjct: 396 VVDGM 400
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI + A + F +M P+I YNTL+ LC+ G +A + E
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ PD +TY I+ C+ G ++ + LF + KG PDV+
Sbjct: 475 YLQKSKM--EPDIYTYNIMSEGMCKAG-----------KVEDGWDLFCSLSLKGVKPDVI 521
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
YN +I G CK + A LF MK+ G P+ TY++LIR + + + E++++M
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 341 Q 341
+
Sbjct: 582 R 582
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 19/253 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T +I L + S A +M + P I N+L+ C + A L++QM
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G+ PD T+T L+ +H KA+ EA L M+ KG PD+VTY
Sbjct: 162 VEMGY--QPDTVTFTTLVHGLFQH------NKAS-----EAVALVERMVVKGCQPDLVTY 208
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
A+I+G CK AL L M+K + V Y ++I +D A+ + +M
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD- 267
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG-- 399
N GI P +Y+ +I LC GR ++A L ++++ P T+ + D G
Sbjct: 268 -NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 400 -EDGLLGDEVHER 411
E L DE+ +R
Sbjct: 327 IEAEKLFDEMIQR 339
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+ ++ YN +I LCR + A +L +M G+ P T L++ +C
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYG--PSIVTLNSLLNGFC- 146
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG R+ EA L M+ G+ PD VT+ L+ G + + A+ L E M
Sbjct: 147 HG----------NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
KGC P+ VTY ++I E D A+ +L M++ Y+ +I +LC+
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRH 255
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
V +A + E+ + G P +TY + LC G
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 18/246 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T LI+ L G S+AS M + P++ ++ LI A + G A+ L
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
++M PD FTY+ LI+ +C H RL EA +F LM+ K P+V
Sbjct: 350 DEMIKRSI--DPDIFTYSSLINGFCMHD-----------RLDEAKHMFELMISKDCFPNV 396
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
VTYN LI G CK R+ +ELF +M ++G N VTY +LI + E D A V +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
M ++ G+ P +Y+ ++ LC G+V A L P YTY ++ + +C A
Sbjct: 457 M--VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 399 G--EDG 402
G EDG
Sbjct: 515 GKVEDG 520
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S+A +M + +PD +NTLI+ L R + A L+++M + G C PD TY
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG--CQPDLVTYG 225
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
I+++ C+ G + ++ E G++ P VV YN +ID C +
Sbjct: 226 IVVNGLCKRGDIDLALSLLKK--MEQGKI---------EPGVVIYNTIIDALCNYKNVND 274
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTP 355
AL LF +M KG PN VTY+SLIR A +L DM +++N P+ +++
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSA 331
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+I A + G++ EA E++ P +TY + + C+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 16/239 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + LI + S A +M + PDI N+L+ C + A L+ QM
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G+ PD+FT+ LI RH R EA L M+ KG PD+VTY
Sbjct: 178 VEMGY--QPDSFTFNTLIHGLFRH-----------NRASEAVALVDRMVVKGCQPDLVTY 224
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+++G CK I AL L + M++ P V Y+++I ++ A+ + +M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD- 283
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
N GI P+ +Y +I LC GR ++A L ++++ P T+ + D G+
Sbjct: 284 -NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 14/236 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI L ASEA RM C+PD+ Y ++ LC+ G+ A LL++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
E P Y +I + C + + + +A LF M KG P+VVTY
Sbjct: 248 EQGKI--EPGVVIYNTIIDALCNY-----------KNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N+LI C R A L DM ++ PN VT+ +LI + ++ A ++ +M +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+ P +Y+ +I+ C R+ EA ++ P TY + C A
Sbjct: 355 RSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+ ++ Y+ LI CR + A +L +M G+ PD T L++ +C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGY--EPDIVTLNSLLNGFC- 162
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG R+ +A L M+ G+ PD T+N LI G + R A+ L + M
Sbjct: 163 HG----------NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
KGC P+ VTY ++ +ID A+ +L+ M++ P Y II ALC
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ-GKIEPGVVIYNTIIDALCNYKN 271
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE----DGLLGDEVHERI 412
V +A + E+ + G P TY + LC G LL D + +I
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 28/256 (10%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T + LI ++G EA + M + PDI Y++LI C AK
Sbjct: 323 NP-NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCR----------------HGILTGCRKATR--- 257
+ E M C P+ TY LI +C+ G++ T
Sbjct: 382 HMFELMISKD--CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 258 -----RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
R A +F+ M+ G +PD++TY+ L+DG C +++ AL +FE +++ P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
+ TY+ +I +++ ++ + L P+ +YT ++ C G EA +
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 373 LVELVDGGNVPREYTY 388
E+ + G +P TY
Sbjct: 559 FREMKEEGPLPDSGTY 574
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T T LI + A + F +M PDI Y+ L+ LC G A +
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E ++ PD +TY I+I C+ G ++ + LF + KG P+V
Sbjct: 490 EYLQRSKM--EPDIYTYNIMIEGMCKAG-----------KVEDGWDLFCSLSLKGVKPNV 536
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
VTY ++ G C+ + A LF +MK++G P+ TY++LIR + + + E++R+
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 340 MQ 341
M+
Sbjct: 597 MR 598
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 123/245 (50%), Gaps = 18/245 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T LI+ L G S+AS M + P++ ++ LI A + G A+ L +
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M PD FTY+ LI+ +C H RL EA +F LM+ K P+VV
Sbjct: 350 EMIKRSI--DPDIFTYSSLINGFCMHD-----------RLDEAKHMFELMISKDCFPNVV 396
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI G CK R++ +ELF +M ++G N VTY++LI+ + D A ++ + M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 341 QRLNHGIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
++ G+P +Y+ ++ LC+ G++ +A L P YTY ++ + +C AG
Sbjct: 457 --VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 400 --EDG 402
EDG
Sbjct: 515 KVEDG 519
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 111/264 (42%), Gaps = 27/264 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI L ASEA RM C+PD+ Y T++ LC+ G+ A LL+
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGC--------RKATR--------------- 257
+ME D YT +I + C + + K R
Sbjct: 245 KMEKGKI--EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 258 -RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
R +A RL M+ + P+VVT++ALID K ++ A +L+++M K+ P+ T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y SLI + + +D A + M P+ +Y +I C+A RV E E+
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 377 VDGGNVPREYTYRLVCDKLCLAGE 400
G V TY + L AG+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGD 445
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
SEA +M +P+ +NTLI+ L + A L+++M G C PD FTY
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG--CQPDLFTYG 224
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
+++ C+ G + ++ E G++ DVV Y +ID C +
Sbjct: 225 TVVNGLCKRGDIDLALSLLKK--MEKGKI---------EADVVIYTTIIDALCNYKNVND 273
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTP 355
AL LF +M KG PN VTY+SLIR A +L DM +++N P+ +++
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSA 330
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+I A + G++ EA E++ P +TY + + C+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
RM+ D+ +YN LI CR A +L +M G+ PD T + L++ YC
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY--EPDIVTLSSLLNGYC- 161
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG +R+ EA L M + P+ VT+N LI G + A+ L + M
Sbjct: 162 HG----------KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
+GC P+ TY +++ +ID A+ +L+ M++ YT II ALC
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKN 270
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE----DGLLGDEVHERI 412
V +A + E+ + G P TY + LC G LL D + +I
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI+ L + G A F +M PDI Y+ L+ LC+ G +A + E
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ PD +TY I+I C+ G ++ + LF + KG P+V+
Sbjct: 490 YLQKSKM--EPDIYTYNIMIEGMCKAG-----------KVEDGWDLFCSLSLKGVKPNVI 536
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
Y +I G C+ + A LF +MK+ G PN TY++LIR + + E++++M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+ + G +S ++ + GR+ +++
Sbjct: 597 R--SCGFVGDASTISMVINMLHDGRLEKSY 624
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M Q P I +N L+ A+ ++ F L E+M+ D ++Y ILI+ +
Sbjct: 68 FGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ--NLRISYDLYSYNILINCF 125
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
CR R L G++ +L G+ PD+VT ++L++G C RI A+ L +
Sbjct: 126 CR-------RSQLPLALAVLGKMMKL----GYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCE 362
M PN VT+++LI N+ AV ++ M + G P +Y +++ LC+
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM--VARGCQPDLFTYGTVVNGLCK 232
Query: 363 AGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
G + A S L ++ G Y + D LC
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 20/222 (9%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
+ + +E FR + + G + VT + L +A K+ + P
Sbjct: 411 VEEGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD------GVPP 463
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T + L+ L + G +A + F +++ PDI YN +I +C+ G L
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ L G P+ YT +IS +CR G+ EA LFR M G +P+
Sbjct: 524 CSLSLKG--VKPNVIIYTTMISGFCRKGLKE-----------EADALFREMKEDGTLPNS 570
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
TYN LI + + EL ++M+ G + T +I
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 141/305 (46%), Gaps = 31/305 (10%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTAT 163
L FF WV ++ GF+H E + M L RA FL + + + +
Sbjct: 85 LRFFDWV-SNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVK---LQDRY 140
Query: 164 ITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME 223
LI+ G GL E+ F MKQ P + +N+L+ L + G A L ++M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 224 LPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
+ PD++T+ LI+ +C++ ++ EA R+F+ M PDVVTYN
Sbjct: 201 -RTYGVTPDSYTFNTLINGFCKNSMVD-----------EAFRIFKDMELYHCNPDVVTYN 248
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCA--PNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+IDG C+ +++ A + M KK PN V+Y +L+R Y EID AV V DM
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM- 307
Query: 342 RLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN------VPREYTYRLVCDK 394
L+ G+ P++ +Y +I L EA R E L+ GGN P T+ ++
Sbjct: 308 -LSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILI----GGNDAFTTFAPDACTFNILIKA 362
Query: 395 LCLAG 399
C AG
Sbjct: 363 HCDAG 367
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 118/324 (36%), Gaps = 70/324 (21%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI + + EA F M+ YHC PD+ YNT+I LCR G A +L M
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 223 ELPGFWCPPDAFTYTILISSYCR-----------HGILTGCRKATR-------RRLYEAG 264
P+ +YT L+ YC H +L+ K + L EA
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH 330
Query: 265 RLFRLM--------LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
R + F F PD T+N LI C + A+++F++M P+ +
Sbjct: 331 RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Query: 317 YDSLIRYYSATNEIDRAVEVLRDM------------------------------------ 340
Y LIR NE DRA + ++
Sbjct: 391 YSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAE 450
Query: 341 ----QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
Q + G+ SY +I C G+ A+ LV ++ VP TY L+ D L
Sbjct: 451 KVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLL 510
Query: 397 LAGEDGLLGDEVHERIKNGMRKRY 420
GE L H+ ++ +R Y
Sbjct: 511 KIGEALL----AHDTLQRMLRSSY 530
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 156 NNPITT-----ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
N+ TT T LIK + G A F M PD +Y+ LI LC
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN 402
Query: 211 NFARAKFLLEQM-----ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGR 265
F RA+ L ++ L C P A Y + C +G + +A +
Sbjct: 403 EFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG-----------KTKQAEK 451
Query: 266 LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
+FR ++ +G V D +Y LI G C+ + + A EL M ++ P+ TY+ LI
Sbjct: 452 VFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLL 510
Query: 326 ATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
E A + L+ M R ++ +P ++++ ++ L + E++ + +++
Sbjct: 511 KIGEALLAHDTLQRMLRSSY-LPVATTFHSVLAELAKRKFANESFCLVTLMLE 562
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 191 HCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILT 250
C+P AYN + LC G +A+ + Q+ G PP +Y LI+ +CR G
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP---SYKTLITGHCREG--- 478
Query: 251 GCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGC 310
+ A L LML + FVPD+ TY LIDG K A + + M +
Sbjct: 479 --------KFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSY 530
Query: 311 APNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTPIIHALCEAGRVAE 368
P T+ S++ + + + ++ M +R+ I S T ++ L + + +
Sbjct: 531 LPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLS---TQVVRLLFSSAQKEK 587
Query: 369 AWSFLVELVDGG 380
A+ + L D G
Sbjct: 588 AFLIVRLLYDNG 599
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+N+LI Q +++LF+ MK+ G +P+ +T++SL+ A ++ +M+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
R P S ++ +I+ C+ V EA+ ++ P TY + D LC AG+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 145/324 (44%), Gaps = 40/324 (12%)
Query: 105 EFFRWVEAHSGFTHDEVTCREMACVLVRAN-ATKTLWGFLKETANKHHNNHRNNPITTAT 163
+ + + G D+VT + +L + + A + LW FLK+ K I
Sbjct: 368 DLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALW-FLKDAQEKGFR------IDKLG 420
Query: 164 ITCLIKLLGEQGLASEA-SLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
+ ++ L ++G SEA L + + HC PD+ Y ++ CR+G +AK LL+ M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 223 ELPGFWCPPDAFTYTILISSYCRHG--------------------------ILTGCRKAT 256
G P+ +YT L++ CR G I+ G R+
Sbjct: 481 HTHGH--KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
+ L EA + R M+ KGF P V N L+ C+ R A + E+ KGCA N V
Sbjct: 539 K--LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+ ++I + +E+D A+ VL DM +N +YT ++ L + GR+AEA + ++
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKH-ADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 377 VDGGNVPREYTYRLVCDKLCLAGE 400
+ G P TYR V + C G+
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGK 679
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 132/302 (43%), Gaps = 22/302 (7%)
Query: 101 RKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
R +L+FF W + + HD + M VL + + L K +R T
Sbjct: 188 RVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVL--VLMKRRGIYR----T 241
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+ ++ G +A M++ P++ NT I R +A LE
Sbjct: 242 PEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M++ G P+ TY +I YC R+ EA L M KG +PD V
Sbjct: 302 RMQVVGIV--PNVVTYNCMIRGYC-----------DLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKK-GCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+Y ++ CK RI +L + M K+ G P++VTY++LI + + D A+ L+D
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD 408
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE-YTYRLVCDKLCLA 398
Q I Y+ I+HALC+ GR++EA + E++ G+ P + TY V + C
Sbjct: 409 AQEKGFRI-DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 399 GE 400
GE
Sbjct: 468 GE 469
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 27/298 (9%)
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNT 201
L+ + N H N + + + + +L Q A FY +Q+ R D Y +
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYS 212
Query: 202 LIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG-------ILTGCRK 254
++ L + ++ +L M+ G + P+AF+ ++ SY R G +LT ++
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV--SYSRAGQLRDALKVLTLMQR 270
Query: 255 AT-----------------RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
A RL +A R M G VP+VVTYN +I G C +R++
Sbjct: 271 AGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEE 330
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
A+EL EDM KGC P++V+Y +++ Y I ++++ M + + +P +Y +I
Sbjct: 331 AIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI 390
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
H L + EA FL + + G + Y + LC G D ++E + G
Sbjct: 391 HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 179 EASLTFY-RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
E +L F RM+ P++ YN +I C + A LLE M G C PD +Y
Sbjct: 294 EKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKG--CLPDKVSYY 351
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK-GFVPDVVTYNALIDGCCKTYRIQ 296
++ C+ +R+ E L + M + G VPD VTYN LI K
Sbjct: 352 TIMGYLCKE-----------KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPI 356
AL +D ++KG +++ Y +++ + A +++ +M H P +YT +
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ C G V +A L + G+ P +Y + + +C G+
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI+ L G A +A M + C PDI YNTLI C+ +A + +
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ G C PD TYT +IS YC+ G ++ EA L ML G P V
Sbjct: 266 DVK-SGSVCSPDVVTYTSMISGYCKAG-----------KMREASSLLDDMLRLGIYPTNV 313
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
T+N L+DG K + A E+ M GC P+ VT+ SLI Y ++ + + +M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
P++ +Y+ +I+ALC R+ +A L +L +P+ + Y V D C AG+
Sbjct: 374 NARGM-FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 22/272 (8%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L K+ E F+ V++ S + D VT M +A G ++E ++ + R
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA-------GKMREASSLLDDMLRLGIY 309
Query: 160 -TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
T T L+ + G A +M + C PD+ + +LI CRVG ++ L
Sbjct: 310 PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
E+M G + P+AFTY+ILI++ C RL +A L + K +P
Sbjct: 370 WEEMNARGMF--PNAFTYSILINALCN-----------ENRLLKARELLGQLASKDIIPQ 416
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
YN +IDG CK ++ A + E+M+KK C P+++T+ LI + + AV +
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
M + P + + ++ L +AG EA+
Sbjct: 477 KMVAIGCS-PDKITVSSLLSCLLKAGMAKEAY 507
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 25/239 (10%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F R K + R YN L +LC+ G A + E M+ G P+ L+SS+
Sbjct: 92 FSRFK-LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGV--SPNNRLLGFLVSSF 148
Query: 244 CRHGIL-------------TGCRKATRR---------RLYEAGRLFRLMLFKGFVPDVVT 281
G L GC R+ +A +LF L D T
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+N LI G C + ++ALEL M GC P+ VTY++LI+ + +NE+++A E+ +D++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ P +YT +I C+AG++ EA S L +++ G P T+ ++ D AGE
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P YN +I C+ G A ++E+ME C PD T+TILI +C G
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK--CKPDKITFTILIIGHCMKG------ 466
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R++EA +F M+ G PD +T ++L+ K + A L + +KG + N
Sbjct: 467 -----RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNN 520
Query: 314 RVTYDS 319
V ++
Sbjct: 521 VVPLET 526
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI+ L G A +A M + C PDI YNTLI C+ +A + +
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ G C PD TYT +IS YC+ G ++ EA L ML G P V
Sbjct: 266 DVK-SGSVCSPDVVTYTSMISGYCKAG-----------KMREASSLLDDMLRLGIYPTNV 313
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
T+N L+DG K + A E+ M GC P+ VT+ SLI Y ++ + + +M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
P++ +Y+ +I+ALC R+ +A L +L +P+ + Y V D C AG+
Sbjct: 374 NARGM-FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 22/272 (8%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L K+ E F+ V++ S + D VT M +A G ++E ++ + R
Sbjct: 257 LNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA-------GKMREASSLLDDMLRLGIY 309
Query: 160 -TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
T T L+ + G A +M + C PD+ + +LI CRVG ++ L
Sbjct: 310 PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
E+M G + P+AFTY+ILI++ C RL +A L + K +P
Sbjct: 370 WEEMNARGMF--PNAFTYSILINALCN-----------ENRLLKARELLGQLASKDIIPQ 416
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
YN +IDG CK ++ A + E+M+KK C P+++T+ LI + + AV +
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
M + P + + ++ L +AG EA+
Sbjct: 477 KMVAIGCS-PDKITVSSLLSCLLKAGMAKEAY 507
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 25/239 (10%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F R K + R YN L +LC+ G A + E M+ G P+ L+SS+
Sbjct: 92 FSRFK-LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGV--SPNNRLLGFLVSSF 148
Query: 244 CRHGIL-------------TGCRKATRR---------RLYEAGRLFRLMLFKGFVPDVVT 281
G L GC R+ +A +LF L D T
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+N LI G C + ++ALEL M GC P+ VTY++LI+ + +NE+++A E+ +D++
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ P +YT +I C+AG++ EA S L +++ G P T+ ++ D AGE
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P YN +I C+ G A ++E+ME C PD T+TILI +C G
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK--CKPDKITFTILIIGHCMKG------ 466
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R++EA +F M+ G PD +T ++L+ K + A L + +KG + N
Sbjct: 467 -----RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNN 520
Query: 314 RVTYDS 319
V ++
Sbjct: 521 VVPLET 526
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 18/243 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + LI L S+AS M + P++ +N LI A + G A+ L ++M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
PD FTY+ LI+ +C H RL EA +F LM+ K P+VVTY
Sbjct: 357 IKRSI--DPDIFTYSSLINGFCMHD-----------RLDEAKHMFELMISKDCFPNVVTY 403
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LI+G CK RI +ELF +M ++G N VTY +LI + + D A V + M
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-- 461
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG-- 399
++ G+ P+ +Y ++ LC+ G++ +A L P YTY ++ + +C AG
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 400 EDG 402
EDG
Sbjct: 522 EDG 524
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 14/238 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI L ASEA RM Q C+P++ Y ++ LC+ G+ A LL
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ME + Y+ +I S C++ R +A LF M KG P+V+
Sbjct: 250 KMEAAKI--EANVVIYSTVIDSLCKY-----------RHEDDALNLFTEMENKGVRPNVI 296
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY++LI C R A L DM ++ PN VT+++LI + ++ A ++ +M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+ + P +Y+ +I+ C R+ EA ++ P TY + + C A
Sbjct: 357 IKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 18/222 (8%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S+A +M + RPD + TLI+ L + A L+++M G C P+ TY
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYG 229
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++++ C+ G + A L M +VV Y+ +ID CK
Sbjct: 230 VVVNGLCKRGDID-----------LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTP 355
AL LF +M+ KG PN +TY SLI A +L DM +++N P+ ++
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN---PNVVTFNA 335
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+I A + G++ EA E++ P +TY + + C+
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M++ ++ YN LI CR + A LL +M G+ P T + L++ YC
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY--EPSIVTLSSLLNGYC- 166
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG +R+ +A L M+ G+ PD +T+ LI G + A+ L + M
Sbjct: 167 HG----------KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
++GC PN VTY ++ +ID A +L M+ + Y+ +I +LC+
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ANVVIYSTVIDSLCKYRH 275
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+A + E+ + G P TY + LC
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T T LI + A + F +M P+I YNTL+ LC+ G +A +
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E ++ P +TY I+I C+ G ++ + LF + KG PDV
Sbjct: 494 EYLQRSKM--EPTIYTYNIMIEGMCKAG-----------KVEDGWDLFCSLSLKGVKPDV 540
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
+ YN +I G C+ + A LF M++ G P+ T
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 16/239 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI + S A +M + P I ++L+ C + A L++QM
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G+ PD T+T LI HG+ + EA L M+ +G P++VTY
Sbjct: 182 VEMGY--RPDTITFTTLI-----HGLF------LHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+++G CK I A L M+ N V Y ++I D A+ + +M+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME- 287
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
N G+ P+ +Y+ +I LC R ++A L ++++ P T+ + D G+
Sbjct: 288 -NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
E F M Q + Y TLI+ + + A+ + +QM G P+ TY
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH--PNIMTYNT 475
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
L+ C++G +L +A +F + P + TYN +I+G CK +++
Sbjct: 476 LLDGLCKNG-----------KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
+LF + KG P+ + Y+++I + + A + R M R + +P S +
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM-REDGPLPDSGT 577
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 20/265 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF-ARAKFLLEQMELP 225
+I LL +EA F M + PD Y TLI C+ G+ A +KF E
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
PD TYT +IS +C+ G + EAG+LF M KG PD VT+ L
Sbjct: 382 ---ITPDVLTYTAIISGFCQIG-----------DMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
I+G CK ++ A + M + GC+PN VTY +LI ++D A E+L +M ++
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 346 GIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLG 405
P+ +Y I++ LC++G + EA + E G TY + D C +GE
Sbjct: 488 Q-PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE----M 542
Query: 406 DEVHERIKNGMRKRYKQTMMVKPVM 430
D+ E +K + K + T++ V+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 16/244 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI ++G AS FY M PD+ Y +I C++G+ A L
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M G PD+ T+T LI+ YC+ G + +A R+ M+ G P+VV
Sbjct: 411 EMFCKGL--EPDSVTFTELINGYCKAG-----------HMKDAFRVHNHMIQAGCSPNVV 457
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY LIDG CK + A EL +M K G PN TY+S++ + I+ AV+++ +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG- 399
+ + +YT ++ A C++G + +A L E++ G P T+ ++ + CL G
Sbjct: 518 EAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 400 -EDG 402
EDG
Sbjct: 577 LEDG 580
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI L ++G A+ + M + +P+I YN+++ LC+ GN A L+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ E G D TYT L+ +YC+ G + +A + + ML KG P +V
Sbjct: 516 EFEAAGL--NADTVTYTTLMDAYCKSG-----------EMDKAQEILKEMLGKGLQPTIV 562
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
T+N L++G C ++ +L M KG APN T++SL++ Y N + A + +DM
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
G P +Y ++ C+A + EAW E+ G TY ++
Sbjct: 623 CSRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 15/252 (5%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++L + GL EA F +M Y + + N + L + + A ++ E P
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPE 239
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
+ +Y I+I C+ G R+ EA L LM KG+ PDV++Y+ ++
Sbjct: 240 VGVCWNVASYNIVIHFVCQLG-----------RIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
+G C+ + + +L E MK+KG PN Y S+I ++ A E +M R G
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR--QG 346
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLG 405
I P + YT +I C+ G + A F E+ P TY + C G+ G
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 406 DEVHERIKNGMR 417
HE G+
Sbjct: 407 KLFHEMFCKGLE 418
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 26/182 (14%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T L+ + G +A M +P I +N L+ C G + LL
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTG--------CRKAT---------------- 256
M G P+A T+ L+ YC L C +
Sbjct: 586 WMLAKGI--APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
R + EA LF+ M KGF V TY+ LI G K + A E+F+ M+++G A ++
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 317 YD 318
+D
Sbjct: 704 FD 705
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 20/265 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF-ARAKFLLEQMELP 225
+I LL +EA F M + PD Y TLI C+ G+ A +KF E
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
PD TYT +IS +C+ G + EAG+LF M KG PD VT+ L
Sbjct: 382 ---ITPDVLTYTAIISGFCQIG-----------DMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
I+G CK ++ A + M + GC+PN VTY +LI ++D A E+L +M ++
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 346 GIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLG 405
P+ +Y I++ LC++G + EA + E G TY + D C +GE
Sbjct: 488 Q-PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE----M 542
Query: 406 DEVHERIKNGMRKRYKQTMMVKPVM 430
D+ E +K + K + T++ V+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 16/244 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI ++G AS FY M PD+ Y +I C++G+ A L
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M G PD+ T+T LI+ YC+ G + +A R+ M+ G P+VV
Sbjct: 411 EMFCKGL--EPDSVTFTELINGYCKAG-----------HMKDAFRVHNHMIQAGCSPNVV 457
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY LIDG CK + A EL +M K G PN TY+S++ + I+ AV+++ +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG- 399
+ + +YT ++ A C++G + +A L E++ G P T+ ++ + CL G
Sbjct: 518 EAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 400 -EDG 402
EDG
Sbjct: 577 LEDG 580
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI L ++G A+ + M + +P+I YN+++ LC+ GN A L+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ E G D TYT L+ +YC+ G + +A + + ML KG P +V
Sbjct: 516 EFEAAGL--NADTVTYTTLMDAYCKSG-----------EMDKAQEILKEMLGKGLQPTIV 562
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
T+N L++G C ++ +L M KG APN T++SL++ Y N + A + +DM
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
G P +Y ++ C+A + EAW E+ G TY ++
Sbjct: 623 CSRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 15/252 (5%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++L + GL EA F +M Y + + N + L + + A ++ E P
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPE 239
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
+ +Y I+I C+ G R+ EA L LM KG+ PDV++Y+ ++
Sbjct: 240 VGVCWNVASYNIVIHFVCQLG-----------RIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
+G C+ + + +L E MK+KG PN Y S+I ++ A E +M R G
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR--QG 346
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLG 405
I P + YT +I C+ G + A F E+ P TY + C G+ G
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 406 DEVHERIKNGMR 417
HE G+
Sbjct: 407 KLFHEMFCKGLE 418
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 26/182 (14%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T L+ + G +A M +P I +N L+ C G + LL
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTG--------CRKAT---------------- 256
M G P+A T+ L+ YC L C +
Sbjct: 586 WMLAKGI--APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
R + EA LF+ M KGF V TY+ LI G K + A E+F+ M+++G A ++
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 317 YD 318
+D
Sbjct: 704 FD 705
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA F +MK C P +R Y LI +LC + A L+++ME G P+ TYT+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI--KPNIHTYTV 363
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI S C ++ + +A L ML KG +P+V+TYNALI+G CK I+ A
Sbjct: 364 LIDSLC-----------SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+++ E M+ + +PN TY+ LI+ Y +N + +A+ VL M +P +Y +I
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLE-RKVLPDVVTYNSLID 470
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
C +G A+ L + D G VP ++TY + D LC
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M + PD+ YN+LI CR GNF A LL M G PD +TYT +I S C+
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV--PDQWTYTSMIDSLCK 509
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
+R+ EA LF + KG P+VV Y ALIDG CK ++ A + E M
Sbjct: 510 -----------SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
K C PN +T+++LI A ++ A + M ++ P+ S+ T +IH L + G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ-PTVSTDTILIHRLLKDGD 617
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
A+S +++ G P +TY C G
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 15/238 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI ++G+ +A M+ P+ R YN LI C+ N +A +L +M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKM 453
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
PD TY LI CR G A RL LM +G VPD TY
Sbjct: 454 LERKVL--PDVVTYNSLIDGQCRSG-----------NFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
++ID CK+ R++ A +LF+ +++KG PN V Y +LI Y ++D A +L M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
N +P+S ++ +IH LC G++ EA ++V G P T ++ +L G+
Sbjct: 561 KN-CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 196 IRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKA 255
I YNTL+ +L R G K + +M L CP + +TY +++ YC+ G
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEM-LEDKVCP-NIYTYNKMVNGYCKLG-------- 232
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
+ EA + ++ G PD TY +LI G C+ + A ++F +M KGC N V
Sbjct: 233 ---NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
Y LI ID A+++ M+ + P+ +YT +I +LC + R +EA + + E
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKD-DECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 376 LVDGGNVPREYTYRLVCDKLC 396
+ + G P +TY ++ D LC
Sbjct: 349 MEETGIKPNIHTYTVLIDSLC 369
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 142/357 (39%), Gaps = 50/357 (14%)
Query: 85 LGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWG--- 141
+ P+ +DL + +L F W+ + + H + + +L+ ++
Sbjct: 88 ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRL 147
Query: 142 -------------FLKETANKHHNNHRNNPITTATITC---LIKLLGEQGLASEASLTFY 185
++ + K + + R I C L+ L GL E +
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
M + P+I YN ++ C++GN A + ++ G PD FTYT LI YC+
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL--DPDFFTYTSLIMGYCQ 265
Query: 246 HGIL------------TGCRK------------ATRRRLYEAGRLFRLMLFKGFVPDVVT 281
L GCR+ RR+ EA LF M P V T
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y LI C + R AL L ++M++ G PN TY LI + + ++A E+L M
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM- 384
Query: 342 RLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNV-PREYTYRLVCDKLC 396
L G+ P+ +Y +I+ C+ G + +A +VEL++ + P TY + C
Sbjct: 385 -LEKGLMPNVITYNALINGYCKRGMIEDAVD-VVELMESRKLSPNTRTYNELIKGYC 439
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+ T LI L G EA+L +M + +P + LI+ L + G+F A +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
QM G PDA TYT I +YCR G RL +A + M G PD+
Sbjct: 627 QMLSSG--TKPDAHTYTTFIQTYCREG-----------RLLDAEDMMAKMRENGVSPDLF 673
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY----------------- 323
TY++LI G + A ++ + M+ GC P++ T+ SLI++
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 324 -YSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAG--RVAE 368
S E D VE+L M + H + P++ SY +I +CE G RVAE
Sbjct: 734 AMSNMMEFDTVVELLEKM--VEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 14/198 (7%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LI + G EA L +M +C P+ +N LI+ LC G A L E+M
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G P T TILI + G A F+ ML G PD TY
Sbjct: 596 IGLQ--PTVSTDTILIHRLLKDGDFD-----------HAYSRFQQMLSSGTKPDAHTYTT 642
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
I C+ R+ A ++ M++ G +P+ TY SLI+ Y + + A +VL+ M R
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-RDT 701
Query: 345 HGIPSSSSYTPIIHALCE 362
PS ++ +I L E
Sbjct: 702 GCEPSQHTFLSLIKHLLE 719
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 26/249 (10%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T +T T LI L + G A F +M +PD Y T I CR G A+ ++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHG-------IL-----TGCRKATRRRLYEAGRLF 267
+M G PD FTY+ LI Y G +L TGC + L L
Sbjct: 661 AKMRENGV--SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 268 RLMLFK--GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
+ K G P++ + +++ +EL E M + PN +Y+ LI
Sbjct: 719 EMKYGKQKGSEPELCAMSNMME-------FDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 326 ATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
+ A +V MQR N GI PS + ++ C+ + EA + +++ G++P+
Sbjct: 772 EVGNLRVAEKVFDHMQR-NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 385 -EYTYRLVC 392
E L+C
Sbjct: 831 LESCKVLIC 839
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LIK L +G SEA + RM + C+PD+ YN+++ +CR G+ + A LL
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGIL------------TGCRKAT------RRRLYE 262
+ME D FTY+ +I S CR G + G + + R L +
Sbjct: 218 KMEERNV--KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 263 AGR------LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
AG+ L + M+ + VP+V+T+N L+D K ++Q A EL+++M +G +PN +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y++L+ Y N + A +L M R N P ++T +I C RV + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 377 VDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGM 416
G V TY ++ C +G+ L + E + +G+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 22/293 (7%)
Query: 108 RWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCL 167
R VE +G D VT + + R+ T L++ RN T + +
Sbjct: 183 RMVE--NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM------EERNVKADVFTYSTI 234
Query: 168 IKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGF 227
I L G A F M+ + + YN+L+ LC+ G + LL+ M
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM--VSR 292
Query: 228 WCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALID 287
P+ T+ +L+ + + G +L EA L++ M+ +G P+++TYN L+D
Sbjct: 293 EIVPNVITFNVLLDVFVKEG-----------KLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 288 GCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI 347
G C R+ A + + M + C+P+ VT+ SLI+ Y +D ++V R++ + +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL-V 400
Query: 348 PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ +Y+ ++ C++G++ A E+V G +P TY ++ D LC G+
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 18/239 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ + ++G EA+ + M P+I YNTL+ C + A +L+ M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
C PD T+T LI YC +R+ + ++FR + +G V + VTY
Sbjct: 360 VRNK--CSPDIVTFTSLIKGYC-----------MVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ- 341
+ L+ G C++ +I+ A ELF++M G P+ +TY L+ ++++A+E+ D+Q
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 342 -RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+++ GI YT II +C+ G+V +AW+ L G P TY ++ LC G
Sbjct: 467 SKMDLGIV---MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
+A F M + P + ++ A+ R F +Q+EL G + +T I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI--AHNIYTLNI 128
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
+I+ +CR C+ + G++ +L G+ PD T+N LI G ++ A
Sbjct: 129 MINCFCRC-----CKTCFAYSVL--GKVMKL----GYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+ L + M + GC P+ VTY+S++ + + A+++LR M+ N +Y+ II
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK-ADVFTYSTIID 236
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE--DG--LLGDEVHERI 412
+LC G + A S E+ G TY + LC AG+ DG LL D V I
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T + L++ + G A F M + PD+ Y L+ LC G +A + E
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
++ YT +I C+ G ++ +A LF + KG P+V+T
Sbjct: 464 LQKSKM--DLGIVMYTTIIEGMCKGG-----------KVEDAWNLFCSLPCKGVKPNVMT 510
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y +I G CK + A L M++ G APN TY++LIR + ++ + +++ +M+
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 342 RLNHGIPSSS 351
+SS
Sbjct: 571 SCGFSADASS 580
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 18/243 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + LI L G S+AS M + P++ ++ LI A + G A+ L ++M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
PD FTY+ LI+ +C H RL EA +F LM+ K P+VVTY
Sbjct: 355 IKRSI--DPDIFTYSSLINGFCMHD-----------RLDEAKHMFELMISKDCFPNVVTY 401
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ LI G CK R++ +ELF +M ++G N VTY +LI + + D A V + Q
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK--QM 459
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG-- 399
++ G+ P+ +Y ++ LC+ G++A+A L P YTY ++ + +C AG
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 400 EDG 402
EDG
Sbjct: 520 EDG 522
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 14/238 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI L ASEA +M Q C+PD+ Y T++ LC+ G+ A LL+
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ME D Y +I C++ + + +A LF M KG PDV
Sbjct: 248 KMEKGKI--EADVVIYNTIIDGLCKY-----------KHMDDALNLFTEMDNKGIRPDVF 294
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY++LI C R A L DM ++ PN VT+ +LI + ++ A ++ +M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+ + P +Y+ +I+ C R+ EA ++ P TY + C A
Sbjct: 355 IKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI + A + F +M P+I YN L+ LC+ G A+A + E
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ PD +TY I+I C+ G ++ + LF + KG P+V+
Sbjct: 493 YLQRSTM--EPDIYTYNIMIEGMCKAG-----------KVEDGWELFCNLSLKGVSPNVI 539
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
YN +I G C+ + A L + MK+ G PN TY++LIR + + + E++++M
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+ + G +S ++ + GR+ +++
Sbjct: 600 R--SCGFAGDASTIGLVTNMLHDGRLDKSF 627
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 16/224 (7%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S A +M + PDI ++L+ C + A L++QM G+ PD FT+T
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY--KPDTFTFT 192
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
LI HG+ + EA L M+ +G PD+VTY +++G CK I
Sbjct: 193 TLI-----HGLF------LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPI 356
AL L + M+K + V Y+++I +D A+ + +M N GI P +Y+ +
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD--NKGIRPDVFTYSSL 299
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
I LC GR ++A L ++++ P T+ + D G+
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P I +N L+ A+ ++ F L EQM+ G D +TY+I I+ +CR
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI--SHDLYTYSIFINCFCR-------- 130
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R +L A + M+ G+ PD+VT ++L++G C + RI A+ L + M + G P+
Sbjct: 131 ---RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDM-QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
T+ +LI N+ AV ++ M QR P +Y +++ LC+ G + A S
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--PDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 373 LVELVDGGNVPREYTYRLVCDKLC 396
L ++ G Y + D LC
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLC 269
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+ D+ Y+ I CR + A +L +M G+ PD T + L++ YC
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY--EPDIVTLSSLLNGYCH 165
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
+R+ +A L M+ G+ PD T+ LI G + A+ L + M
Sbjct: 166 S-----------KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
++GC P+ VTY +++ +ID A+ +L+ M++ Y II LC+
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKH 273
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE----DGLLGDEVHERI 412
+ +A + E+ + G P +TY + LC G LL D + +I
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 14/235 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T + LIK + E F M Q + Y TLI+ + + A+ + +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
QM G P+ TY IL+ C++G +L +A +F + PD+
Sbjct: 458 QMVSVGVH--PNILTYNILLDGLCKNG-----------KLAKAMVVFEYLQRSTMEPDIY 504
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN +I+G CK +++ ELF ++ KG +PN + Y+++I + + A +L+ M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+ + +P+S +Y +I A G + + E+ G T LV + L
Sbjct: 565 KE-DGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 29/255 (11%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I L + G A +M++ H + + YN +I LC+ G+ A+ L +M G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRR------------------------RLYE 262
+ PD TY+ +I S+CR G T + R ++ E
Sbjct: 107 IF--PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE 164
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
A ++ ML +G P +TYN++IDG CK R+ A + + M K C+P+ VT+ +LI
Sbjct: 165 AEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Query: 323 YYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
Y +D +E+ +M R GI +++ +YT +IH C+ G + A L ++ G
Sbjct: 225 GYCKAKRVDNGMEIFCEMHR--RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 382 VPREYTYRLVCDKLC 396
P T++ + LC
Sbjct: 283 APNYITFQSMLASLC 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T + LI L ++G SEA + M + P YN++I C+ AK
Sbjct: 143 NP-DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+L+ M C PD T++ LI+ YC+ +R+ +F M +G V
Sbjct: 202 RMLDSMASKS--CSPDVVTFSTLINGYCK-----------AKRVDNGMEIFCEMHRRGIV 248
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
+ VTY LI G C+ + A +L M G APN +T+ S++ + E+ +A +
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 337 LRDMQR 342
L D+Q+
Sbjct: 309 LEDLQK 314
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
M + CRPD+ + TL+ LC G +A L+++M G Y +I+ C+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ------PYGTIINGLCKM 54
Query: 247 G-------ILTGCRK-----------ATRRRLYEAG------RLFRLMLFKGFVPDVVTY 282
G +L+ + A RL + G LF M KG PDV+TY
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ +ID C++ R A +L DM ++ P+ VT+ +LI ++ A E+ DM R
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGED 401
GI P++ +Y +I C+ R+ +A L + P T+ + + C A
Sbjct: 175 --RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA--- 229
Query: 402 GLLGDEVHERIKNGMR 417
+R+ NGM
Sbjct: 230 --------KRVDNGME 237
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 18/245 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T + LI L G S+AS M + PD+ ++ LI A + G A+ L +
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M P TY+ LI+ +C H RL EA ++F M+ K PDVV
Sbjct: 351 EMVKRSI--DPSIVTYSSLINGFCMHD-----------RLDEAKQMFEFMVSKHCFPDVV 397
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI G CK R++ +E+F +M ++G N VTY+ LI+ + D A E+ ++M
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 341 QRLNHGIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
++ G+P + +Y ++ LC+ G++ +A L P YTY ++ + +C AG
Sbjct: 458 --VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 400 --EDG 402
EDG
Sbjct: 516 KVEDG 520
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+Q P + YNT+I LC+ + A L ++ME G P+ TY+ LIS C
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI--RPNVVTYSSLISCLCN 303
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
+G R +A RL M+ + PDV T++ALID K ++ A +L+++M
Sbjct: 304 YG-----------RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
K+ P+ VTY SLI + + +D A ++ M H P +Y +I C+ R
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPDVVTYNTLIKGFCKYKR 411
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGM 416
V E E+ G V TY ++ L AG+ + + E + +G+
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 58/297 (19%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI L ASEA RM C+PD+ Y ++ LC+ G+ A LL
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 221 QMEL----PGF---------WCP--------------------PDAFTYTILISSYCRHG 247
+ME PG C P+ TY+ LIS C +G
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 248 ILTGCRK------------------------ATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
+ + +L EA +L+ M+ + P +VTY+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+LI+G C R+ A ++FE M K C P+ VTY++LI+ + ++ +EV R+M +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ ++ +Y +I L +AG A E+V G P TY + D LC G+
Sbjct: 426 GL-VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI+ L + G A F M P+I YNTL+ LC+ G +A + E
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ P +TY I+I C+ G ++ + LF + KG PDVV
Sbjct: 491 YLQRSKM--EPTIYTYNIMIEGMCKAG-----------KVEDGWDLFCNLSLKGVKPDVV 537
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
YN +I G C+ + A LF++MK+ G PN Y++LIR + + + E++++M
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+ + G +S ++ + GR+ +++
Sbjct: 598 R--SCGFAGDASTIGLVTNMLHDGRLDKSF 625
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
SEA +M +P+ +NTLI+ L + A L+++M G C PD TY
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG--CQPDLVTYG 225
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++++ C+ G + E G+L P V+ YN +IDG CK +
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNK--MEQGKL---------EPGVLIYNTIIDGLCKYKHMDD 274
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTP 355
AL LF++M+ KG PN VTY SLI A +L DM +++N P +++
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PDVFTFSA 331
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+I A + G++ EA E+V P TY + + C+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
+A F M + P I ++ L+ A+ ++ F L EQM+ G P + +TY+I
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI--PHNHYTYSI 121
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI+ +CR R L G++ +L G+ P++VT ++L++G C + RI A
Sbjct: 122 LINCFCR-------RSQLPLALAVLGKMMKL----GYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPII 357
+ L + M G PN VT+++LI N+ A+ ++ M + G P +Y ++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM--VAKGCQPDLVTYGVVV 228
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ LC+ G A++ L ++ G P Y + D LC
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY+ LI+ C+ ++ AL + M K G PN VT SL+ Y + I AV ++ M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ P++ ++ +IH L + +EA + + +V G P TY +V + LC G+
Sbjct: 178 FVTGYQ-PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 401 DGL 403
L
Sbjct: 237 TDL 239
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 20/217 (9%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
+ + +E FR + + G + VT + L +A KE + P
Sbjct: 412 VEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD------GVPP 464
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T L+ L + G +A + F +++ P I YN +I +C+ G L
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ L G PD Y +IS +CR G EA LF+ M G +P+
Sbjct: 525 CNLSLKG--VKPDVVAYNTMISGFCRKG-----------SKEEADALFKEMKEDGTLPNS 571
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
YN LI + + + EL ++M+ G A + T
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 14/201 (6%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
RPD YNTL+ A R N A + E ME C PD +TY +IS Y R G+
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDME--AHRCQPDLWTYNAMISVYGRCGLAA-- 349
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
EA RLF + KGF PD VTYN+L+ + ++ E+++ M+K G
Sbjct: 350 ---------EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
+ +TY+++I Y ++D A+++ +DM+ L+ P + +YT +I +L +A R EA +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 373 LVELVDGGNVPREYTYR-LVC 392
+ E++D G P TY L+C
Sbjct: 461 MSEMLDVGIKPTLQTYSALIC 481
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 183 TFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISS 242
F M+ + C+PD+ YN +I R G A A+ L ++EL GF+ PDA TY L+ +
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF--PDAVTYNSLLYA 376
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
+ R R + +++ M GF D +TYN +I K ++ AL+L+
Sbjct: 377 FARE-----------RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 303 EDMKK-KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHAL 360
+DMK G P+ +TY LI N A ++ +M L+ GI P+ +Y+ +I
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM--LDVGIKPTLQTYSALICGY 483
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+AG+ EA ++ G P Y ++ D L E
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 25/280 (8%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
HR P T +I + G GLA+EA F ++ PD YN+L+YA R N
Sbjct: 326 HRCQP-DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLML-F 272
+ K + +QM+ GF D TY +I Y + G +L A +L++ M
Sbjct: 385 KVKEVYQQMQKMGF--GKDEMTYNTIIHMYGKQG-----------QLDLALQLYKDMKGL 431
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
G PD +TY LID K R A L +M G P TY +LI Y+ + +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 333 AVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
A + M R + P + +Y+ ++ L +AW +++ G+ P Y L+
Sbjct: 492 AEDTFSCMLR-SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 393 DKLCLAGEDGLLGDEVHERIKN-----GMRKRYKQTMMVK 427
L L E+ D++ + I++ GM +++VK
Sbjct: 551 --LGLMKENR--SDDIQKTIRDMEELCGMNPLEISSVLVK 586
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 130/309 (42%), Gaps = 26/309 (8%)
Query: 123 CREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASL 182
C M ++ A + LW + + R + T L+ + G A
Sbjct: 751 CSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKT--WNSLMSAYAQCGCYERARA 808
Query: 183 TFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISS 242
F M + P + + N L++ALC G ++E+++ GF + +++ +
Sbjct: 809 IFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSIL--LMLDA 866
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
+ R G ++E +++ M G++P + Y +I+ CK R++ A +
Sbjct: 867 FARAG-----------NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV 915
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH-GI-PSSSSYTPIIHAL 360
+M++ ++S+++ Y+A + + V+V QR+ G+ P ++Y +I
Sbjct: 916 SEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY---QRIKETGLEPDETTYNTLIIMY 972
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL----CLAGEDGLLGDEVHERIKNGM 416
C R E + + ++ + G P+ TY+ + CL + L + + + +K +
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK--L 1030
Query: 417 RKRYKQTMM 425
+ + TMM
Sbjct: 1031 DRSFYHTMM 1039
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 47/254 (18%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I+ ++I ++ G E + MK P IR Y +I LC+ A+ +
Sbjct: 855 ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIM 914
Query: 219 LEQMELPGF------W---------------------------CPPDAFTYTILISSYCR 245
+ +ME F W PD TY LI YCR
Sbjct: 915 VSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
RR E L + M G P + TY +LI K +++A +LFE++
Sbjct: 975 D-----------RRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAG 364
KG +R Y ++++ + +A ++L+ M+ N GI P+ ++ ++ + +G
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK--NAGIEPTLATMHLLMVSYSSSG 1081
Query: 365 RVAEAWSFLVELVD 378
EA L L D
Sbjct: 1082 NPQEAEKVLSNLKD 1095
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 17/221 (7%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG--FWCPPDAFT 235
+EAS F ++ C +++ C++G A ++ Q E G F C P
Sbjct: 698 AEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---M 754
Query: 236 YTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRI 295
YT +I +Y + + L ++GR PD+ T+N+L+ +
Sbjct: 755 YTDIIEAYGKQKLWQKAESVV-GNLRQSGR----------TPDLKTWNSLMSAYAQCGCY 803
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
+RA +F M + G +P + + L+ ++ V+ ++Q + I S SS
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKI-SKSSILL 862
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
++ A AG + E + G +P YR++ + LC
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 22/281 (7%)
Query: 98 LGLRKSLEFFRWVEAHSGFTHDEV-TCREMACVLVRANATKTLWGFLKETANKHHNNHRN 156
+ L +SL FF W + + H EM + + W + + RN
Sbjct: 128 IPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKS------RN 181
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
I+ T T LI+ GLASEA F RM+ Y C PD A++ +I L R + A+
Sbjct: 182 VEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQ 241
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+ ++ F PD YT L+ +CR G + EA ++F+ M G
Sbjct: 242 SFFDSLK-DRF--EPDVIVYTNLVRGWCRAG-----------EISEAEKVFKEMKLAGIE 287
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
P+V TY+ +ID C+ +I RA ++F DM GCAPN +T+++L+R + ++ ++V
Sbjct: 288 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
M++L P + +Y +I A C + A L ++
Sbjct: 348 YNQMKKLGCE-PDTITYNFLIEAHCRDENLENAVKVLNTMI 387
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 101/277 (36%), Gaps = 57/277 (20%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM-- 222
T L++ G SEA F MK P++ Y+ +I ALCR G +RA + M
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 223 -------------------------------ELPGFWCPPDAFTYTILISSYCRHGILTG 251
++ C PD TY LI ++CR L
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLEN 378
Query: 252 CRKA------------------------TRRRLYEAGRLFRLMLFKGFVPDVVTYNALID 287
K +R + A R++ M+ P+ VTYN L+
Sbjct: 379 AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Query: 288 GCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI 347
+ L++ ++M K PN TY L+ + + A ++ ++M
Sbjct: 439 MFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLT 498
Query: 348 PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
PS S Y ++ L AG++ + + +++ G V R
Sbjct: 499 PSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 99/262 (37%), Gaps = 55/262 (20%)
Query: 159 ITTATITCLIKLLGE--QGLASEASLTFYRMKQYHCRPDIRA---YNTLIYALCRVGNFA 213
++ + + C+I+ G G+ SL F+ D ++ YN +I +V F
Sbjct: 109 VSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFD 168
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
A L++ M+ + T+TILI Y R G+ + EA F M
Sbjct: 169 LAWHLIDLMKSRNVEISIE--TFTILIRRYVRAGLAS-----------EAVHCFNRMEDY 215
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G VPD + ++ +I + R A F+ +K + P+ + Y +L+R +
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGW--------- 265
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
C AG ++EA E+ G P YTY +V D
Sbjct: 266 ---------------------------CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVID 298
Query: 394 KLCLAGEDGLLGDEVHERIKNG 415
LC G+ D + + +G
Sbjct: 299 ALCRCGQISRAHDVFADMLDSG 320
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 16/215 (7%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
+ Y PD+ YN+LIY + G A +L M G C P+ ++YTIL+ +C+
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG--CKPNVYSYTILVDGFCKL 437
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
G ++ EA + M G P+ V +N LI CK +RI A+E+F +M
Sbjct: 438 G-----------KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGR 365
+KGC P+ T++SLI +EI A+ +LRDM ++ G+ +++ +Y +I+A G
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM--ISEGVVANTVTYNTLINAFLRRGE 544
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ EA + E+V G+ E TY + LC AGE
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 16/238 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI ++GL A + M+ C+P++ +Y L+ C++G A +L +M
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G P+ + LIS++C+ R+ EA +FR M KG PDV T+
Sbjct: 451 SADGL--KPNTVGFNCLISAFCKE-----------HRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N+LI G C+ I+ AL L DM +G N VTY++LI + EI A +++ +M
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-- 555
Query: 343 LNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ G P +Y +I LC AG V +A S +++ G+ P + ++ + LC +G
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 14/240 (5%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T CLI ++ EA F M + C+PD+ +N+LI LC V A +LL
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
M G + TY LI+++ R G + EA +L M+F+G D
Sbjct: 518 RDMISEG--VVANTVTYNTLINAFLRRG-----------EIKEARKLVNEMVFQGSPLDE 564
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+TYN+LI G C+ + +A LFE M + G AP+ ++ + LI + ++ AVE ++
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M L P ++ +I+ LC AGR+ + + +L G P T+ + LC G
Sbjct: 625 MV-LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 44/269 (16%)
Query: 180 ASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
A+ FY M P + + ++ A C V A LL M G C P++ Y L
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG--CVPNSVIYQTL 258
Query: 240 ISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
I S L+ C R+ EA +L M G VPD T+N +I G CK RI A
Sbjct: 259 IHS------LSKCN-----RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307
Query: 300 ELFEDMKKKGCAPNRVTY-------------------------------DSLIRYYSATN 328
++ M +G AP+ +TY ++LI +
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHG 367
Query: 329 EIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+D A VL DM +P +Y +I+ + G V A L ++ + G P Y+Y
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 389 RLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
++ D C G+ + ++E +G++
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 155 RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR 214
+ +P+ T LIK L G +A F +M + P + N LI LCR G
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
A ++M L G PD T+ LI+ CR G R+ + +FR + +G
Sbjct: 618 AVEFQKEMVLRG--STPDIVTFNSLINGLCRAG-----------RIEDGLTMFRKLQAEG 664
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
PD VT+N L+ CK + A L ++ + G PN T+ L++ +DR
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 22/284 (7%)
Query: 99 GLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNP 158
G ++ FF W + +G+ H T M VL + +W E N+ + N +
Sbjct: 145 GWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMW----ELVNEMNKNEESKL 200
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
+T T++ +++ L + G ++A F M K Y + D A N+L+ AL + + A
Sbjct: 201 VTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHA-- 258
Query: 218 LLEQMELPGF-WCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
++ L F PDA T+ ILI +C+ R+ +A + LM F
Sbjct: 259 --HEVFLKLFDTIKPDARTFNILIHGFCK-----------ARKFDDARAMMDLMKVTEFT 305
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
PDVVTY + ++ CK +R E+ E+M++ GC PN VTY ++ + ++ A+ V
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
M+ + +P + Y+ +IH L + GR +A ++ + G
Sbjct: 366 YEKMKE-DGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 86/227 (37%), Gaps = 34/227 (14%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T T ++ LG+ +EA + +MK+ C PD + Y++LI+ L + G F A
Sbjct: 340 NP-NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGR----------- 265
+ E M G D Y +IS+ H + +R E G
Sbjct: 399 EIFEDMTNQG--VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAP 456
Query: 266 ----------------LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG 309
L M+ DV TY LI G C + +++ A FE+ +KG
Sbjct: 457 LLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516
Query: 310 CAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPI 356
P T L+ N + +++ Q L S++P+
Sbjct: 517 MVPRDSTCKMLVDELEKKNMAEAKLKI----QSLVQSKTMIDSHSPL 559
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 135/320 (42%), Gaps = 55/320 (17%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G+ D V + L + + F KE K R N +T T L+ L
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK---GIRPNVVT---YTALVNGLCNS 238
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
S+A+ M + P++ Y+ L+ A + G AK L E+M PD
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI--DPDIV 296
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
TY+ LI+ C H R+ EA ++F LM+ KG + DVV+YN LI+G CK R
Sbjct: 297 TYSSLINGLCLHD-----------RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE------------------- 335
++ ++LF +M ++G N VTY++LI+ + ++D+A E
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 336 ----------------VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
+ DMQ+ + +YT +I +C+ G+V EAWS L
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 380 GNVPREYTYRLVCDKLCLAG 399
G P TY + LC G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 29/264 (10%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
TI L+ + S+A +M + +PDI AYN +I +LC+ A ++
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 222 MELPGFWCPPDAFTYTILISSYCRHG-------ILTGCRK-----------------ATR 257
+E G P+ TYT L++ C +L+ K
Sbjct: 216 IERKGI--RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
++ EA LF M+ PD+VTY++LI+G C RI A ++F+ M KGC + V+Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVEL 376
++LI + ++ +++ R+M + G+ S++ +Y +I +AG V +A F ++
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQ--RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 377 VDGGNVPREYTYRLVCDKLCLAGE 400
G P +TY ++ LC GE
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGE 415
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+ R D+ +N +I C + A +L +M G+ PD T L++ +CR
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY--EPDRVTIGSLVNGFCR 167
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
R R+ +A L M+ G+ PD+V YNA+ID CKT R+ A + F+++
Sbjct: 168 -----------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
++KG PN VTY +L+ ++ A +L DM + P+ +Y+ ++ A + G+
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVKNGK 275
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
V EA E+V P TY + + LCL
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + L+ + G EA F M + PDI Y++LI LC A + + M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 223 ELPGFWCPPDAFTYTILISSYCR----HGILTGCRKATRRRL--------------YEAG 264
G C D +Y LI+ +C+ + R+ ++R L ++AG
Sbjct: 322 VSKG--CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 265 ------RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
F M F G PD+ TYN L+ G C +++AL +FEDM+K+ + VTY
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
++IR T +++ A + + L P +YT ++ LC G + E + ++
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLS-LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 379 GGNVPREYT 387
G + + T
Sbjct: 499 EGLMKNDCT 507
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 14/247 (5%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
RN + + +I L + G A F M+ +I YN LI C G +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
LL M P+ T+++LI S+ + G +L EA L + M+ +
Sbjct: 316 DGAKLLRDMIKRKI--NPNVVTFSVLIDSFVKEG-----------KLREAEELHKEMIHR 362
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G PD +TY +LIDG CK + +A ++ + M KGC PN T++ LI Y N ID
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+E+ R M L + + +Y +I CE G++ A E+V P TY+++ D
Sbjct: 423 LELFRKMS-LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 394 KLCLAGE 400
LC GE
Sbjct: 482 GLCDNGE 488
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 23/247 (9%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T + LI ++G EA M PD Y +LI C+ + +A
Sbjct: 330 NP-NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+++ M G C P+ T+ ILI+ YC+ R+ + LFR M +G V
Sbjct: 389 QMVDLMVSKG--CDPNIRTFNILINGYCKA-----------NRIDDGLELFRKMSLRGVV 435
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
D VTYN LI G C+ ++ A ELF++M + PN VTY L+ E ++A+E+
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 337 LRDMQR----LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
+++ L+ GI Y IIH +C A +V +AW L G P TY ++
Sbjct: 496 FEKIEKSKMELDIGI-----YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 393 DKLCLAG 399
LC G
Sbjct: 551 GGLCKKG 557
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 18/244 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
TI L+ L G +EA L +M +Y C+P+ Y ++ +C+ G A A LL +M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
E DA Y+I+I C+HG L A LF M KG +++TY
Sbjct: 255 EERNI--KLDAVKYSIIIDGLCKHG-----------SLDNAFNLFNEMEMKGITTNIITY 301
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LI G C R +L DM K+ PN VT+ LI + ++ A E+ ++M
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-- 359
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG-- 399
++ GI P + +YT +I C+ + +A + +V G P T+ ++ + C A
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 400 EDGL 403
+DGL
Sbjct: 420 DDGL 423
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T + LI L +G SEA RM + +PD+ NTL+ LC G A A L+
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
++M + C P+A TY +++ C+ G + A L R M + D
Sbjct: 217 DKM--VEYGCQPNAVTYGPVLNVMCKSG-----------QTALAMELLRKMEERNIKLDA 263
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
V Y+ +IDG CK + A LF +M+ KG N +TY+ LI + D ++LRD
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 340 M--QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
M +++N P+ +++ +I + + G++ EA E++ G P TY + D C
Sbjct: 324 MIKRKIN---PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 141 GFLKETANKHHNN-HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAY 199
G L+E H HR T T T LI ++ +A+ M C P+IR +
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 200 NTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR 259
N LI C+ L +M L G D TY LI +C G +
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVV--ADTVTYNTLIQGFCELG-----------K 453
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
L A LF+ M+ + P++VTY L+DG C ++ALE+FE ++K + Y+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
+I +++D A ++ + L P +Y +I LC+ G ++EA ++ +
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLP-LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 380 GNVPREYTYRLV 391
G+ P +TY ++
Sbjct: 573 GHAPDGWTYNIL 584
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 43/270 (15%)
Query: 177 ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
A +A F M P + ++ L A+ + + L +QMEL G + +T
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI--AHNLYTL 126
Query: 237 TILISSYCRHGILTGCRK------------------------------ATRRRLYEAGRL 266
+I+I+ +CR CRK R+ EA L
Sbjct: 127 SIMINCFCR------CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 267 FRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSA 326
M+ G PD++T N L++G C + + A+ L + M + GC PN VTY ++
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 327 TNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREY 386
+ + A+E+LR M+ N + + Y+ II LC+ G + A++ E+ G
Sbjct: 241 SGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 387 TYRLVCDKLCLAG--EDG--LLGDEVHERI 412
TY ++ C AG +DG LL D + +I
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F +M D YNTLI C +G AK L ++M PP+ TY IL+
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM--VSRKVPPNIVTYKILLDGL 483
Query: 244 CRHG--------------------------ILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
C +G I+ G A++ + +A LF + KG P
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK--VDDAWDLFCSLPLKGVKP 541
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
V TYN +I G CK + A LF M++ G AP+ TY+ LIR + + ++V+++
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 338 RDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+++R G +S ++ + GR+ +++
Sbjct: 602 EELKRC--GFSVDASTIKMVIDMLSDGRLKKSF 632
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 29/239 (12%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
M Q H + D+ ++ LC+ GN A+ L +M G + P+ TY +I S+C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF--PNVLTYNCMIDSFCHS 58
Query: 247 GILTGCRKATR------------------------RRLYEAGRLFRLMLFKGFVPDVVTY 282
G + + R R++ EA +++ ML P +TY
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N++IDG CK R+ A + + M KGC+P+ VT+ +LI Y +D +E+ +M R
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 343 LNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
GI +++ +YT +IH C+ G + A L E++ G P T+ + LC E
Sbjct: 179 --RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 235
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T C+I G S+A M + PDI ++ LI A + + A+ + ++M
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM 106
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ P TY +I +C+ + R+ +A R+ M KG PDVVT+
Sbjct: 107 LRWSIF--PTTITYNSMIDGFCK-----------QDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ LI+G CK R+ +E+F +M ++G N VTY +LI + ++D A ++L +M
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM-- 211
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
++ G+ P ++ ++ LC + +A++ L +L
Sbjct: 212 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 149 KHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCR 208
+H + NP T + LI ++ SEA + M ++ P YN++I C+
Sbjct: 69 RHMIEKQINP-DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 209 VGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFR 268
AK +L+ M G C PD T++ LI+ YC+ +R+ +F
Sbjct: 128 QDRVDDAKRMLDSMASKG--CSPDVVTFSTLINGYCK-----------AKRVDNGMEIFC 174
Query: 269 LMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATN 328
M +G V + VTY LI G C+ + A +L +M G AP+ +T+ ++ +
Sbjct: 175 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
Query: 329 EIDRAVEVLRDMQR 342
E+ +A +L D+Q+
Sbjct: 235 ELRKAFAILEDLQK 248
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 122/239 (51%), Gaps = 16/239 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + LI L G S+AS M + P++ ++ LI A + G +A+ L E+M
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
P+ FTY+ LI+ +C RL EA ++ LM+ K +P+VVTY
Sbjct: 350 IKRSI--DPNIFTYSSLINGFC-----------MLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LI+G CK R+ + +ELF +M ++G N VTY +LI + + D A V + M
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-- 454
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ G+ P+ +Y ++ LC+ G++A+A L P YTY ++ + +C AG+
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 58/297 (19%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI L ASEA RM Q C+PD+ Y ++ LC+ G+ A LL
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242
Query: 221 QMELPGF-------------WCP--------------------PDAFTYTILISSYCRHG 247
+ME C P+ TY+ LIS C +G
Sbjct: 243 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
Query: 248 ILTGCRK------------------------ATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
+ + + +L +A +L+ M+ + P++ TY+
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+LI+G C R+ A ++ E M +K C PN VTY++LI + +D+ +E+ R+M +
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ ++ +YT +IH +A A ++V G P TY ++ D LC G+
Sbjct: 423 GL-VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M + PDI N+L+ C + A L++QM G+ PD T+T LI
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY--KPDTVTFTTLI----- 190
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG+ + EA L M+ +G PD+VTY A+++G CK AL L M
Sbjct: 191 HGLF------LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAG 364
+ N V Y ++I D A+ + +M+ N G+ P+ +Y+ +I LC G
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME--NKGVRPNVITYSSLISCLCNYG 302
Query: 365 RVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
R ++A L ++++ P T+ + D G+
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M Q P I ++ L+ A+ ++ F E+ME+ G + +TY ILI+ +
Sbjct: 66 FGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGI--SHNLYTYNILINCF 123
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
CR C + + G++ +L G+ PD+VT N+L++G C RI A+ L +
Sbjct: 124 CR------CSRLSLALA-LLGKMMKL----GYEPDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL-RDMQRLNHGIPSSSSYTPIIHALCE 362
M + G P+ VT+ +LI N+ AV ++ R +QR P +Y +++ LC+
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ--PDLVTYGAVVNGLCK 230
Query: 363 AGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
G A + L ++ Y V D LC
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 18/222 (8%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S+A +M + +PD + TLI+ L + A L+++M G C PD TY
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG--CQPDLVTYG 222
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
+++ C+ G A L M +VV Y+ +ID CK
Sbjct: 223 AVVNGLCKRGDTD-----------LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTP 355
AL LF +M+ KG PN +TY SLI A +L DM +++N P+ +++
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN---PNLVTFSA 328
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+I A + G++ +A E++ P +TY + + C+
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G ++ TYN LI+ C+ R+ AL L M K G P+ VT +SL+ + N I A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
V ++ M + + P + ++T +IH L + +EA + + +V G P TY V +
Sbjct: 168 VALVDQMVEMGYK-PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 394 KLCLAGEDGL 403
LC G+ L
Sbjct: 227 GLCKRGDTDL 236
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T +I+ + ++G+ A ++ C PD+ +YN L+ AL G + + L+ +M
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
C P+ TY+ILI++ CR G ++ EA L +LM KG PD +Y
Sbjct: 325 FSEK--CDPNVVTYSILITTLCRDG-----------KIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ LI C+ R+ A+E E M GC P+ V Y++++ + D+A+E+ +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ P+SSSY + AL +G A ++E++ G P E TY + LC G
Sbjct: 432 VGCS-PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 49/268 (18%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
L++ L QG E +M C P++ Y+ LI LCR G A LL+ M+ G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PDA++Y LI+++CR G RL A M+ G +PD+V YN ++
Sbjct: 364 L--TPDAYSYDPLIAAFCREG-----------RLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPN--------------------------------- 313
CK + +ALE+F + + GC+PN
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 314 --RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWS 371
+TY+S+I +D A E+L DM+ PS +Y ++ C+A R+ +A +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH-PSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 372 FLVELVDGGNVPREYTYRLVCDKLCLAG 399
L +V G P E TY ++ + + AG
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+PD+ AYN LI C++ A +L++M F PD TY I+I S C G L
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDF--SPDTVTYNIMIGSLCSRGKLDLA 212
Query: 253 RKATRRRLY------------------------EAGRLFRLMLFKGFVPDVVTYNALIDG 288
K + L EA +L ML +G PD+ TYN +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 289 CCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP 348
CK + RA E+ +++ KGC P+ ++Y+ L+R + + +++ M P
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDP 331
Query: 349 SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ +Y+ +I LC G++ EA + L + + G P Y+Y + C G
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++ L + G A +A F ++ + C P+ +YNT+ AL G+ RA ++ +M G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PD TY +IS CR G++ EA L M F P VVTYN ++
Sbjct: 469 I--DPDEITYNSMISCLCREGMVD-----------EAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
G CK +RI+ A+ + E M GC PN TY LI A+E+ D+ R++
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 207 CRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRL 266
CR GN+ + LLE M G+ PD T LI + T R + +A R+
Sbjct: 100 CRSGNYIESLHLLETMVRKGY--NPDVILCTKLIKGF-----------FTLRNIPKAVRV 146
Query: 267 FRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSA 326
+ L K PDV YNALI+G CK RI A + + M+ K +P+ VTY+ +I +
Sbjct: 147 MEI-LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 327 TNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREY 386
++D A++VL + N P+ +YT +I A G V EA + E++ G P +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQ-PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 387 TYRLVCDKLCLAGEDGLLGDEVHERIKN 414
TY + +C G + D E ++N
Sbjct: 265 TYNTIIRGMCKEG----MVDRAFEMVRN 288
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD+ LI + N +A ++E +E G PD F Y LI+ +C+
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG---QPDVFAYNALINGFCKM------- 171
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R+ +A R+ M K F PD VTYN +I C ++ AL++ + C P
Sbjct: 172 ----NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 227
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSF 372
+TY LI +D A++++ +M L+ G+ P +Y II +C+ G V A+
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEM--LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ L G P +Y ++ L G+
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGK 313
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 16/241 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T LI L G S+A+ M + PD+ +N LI A + G + A+ E
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M PD TY++LI C + RL EA +F M+ KG PDVV
Sbjct: 281 EMIRRSL--DPDIVTYSLLIYGLCMYS-----------RLDEAEEMFGFMVSKGCFPDVV 327
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY+ LI+G CK+ +++ ++LF +M ++G N VTY LI+ Y +++ A E+ R M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 341 QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ G+ P+ +Y ++H LC+ G++ +A L ++ G TY ++ +C AG
Sbjct: 388 --VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 400 E 400
E
Sbjct: 446 E 446
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 14/226 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI ++G SEA + M + PDI Y+ LIY LC A+ + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G C PD TY+ILI+ YC+ +++ +LF M +G V + VTY
Sbjct: 318 VSKG--CFPDVVTYSILINGYCKS-----------KKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
LI G C+ ++ A E+F M G PN +TY+ L+ +I++A+ +L DMQ+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
N +Y II +C+AG VA+AW L G +P +TY
Sbjct: 425 -NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 33/241 (13%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F+ M Q P I ++ L+ A+ ++ + +L EQM++ G P + T IL++ +
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI--PHNLCTCNILLNCF 126
Query: 244 CR--------------------------HGILTG-CRKATRRRLYEAGRLFRLMLFKGFV 276
CR +L G CR R+Y+A +F M+ G+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG---DRVYDALYMFDQMVGMGYK 183
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
P+VV YN +IDG CK+ ++ AL+L M+K G P+ VTY+SLI ++ A +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ M + P ++ +I A + GRV+EA F E++ P TY L+ LC
Sbjct: 244 VSCMTK-REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 397 L 397
+
Sbjct: 303 M 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T T LI+ G + A F RM P+I YN L++ LC G +A +L
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
M+ G D TY I+I C+ G + +A ++ + +G +PD+
Sbjct: 420 ADMQKNGM--DADIVTYNIIIRGMCKAG-----------EVADAWDIYCSLNCQGLMPDI 466
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
TY ++ G K + A LF MK+ G PN
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 21/165 (12%)
Query: 252 CRKATRRRLYEAGRLFRLMLFKGF--------------------VPDVVTYNALIDGCCK 291
C RR Y G +R ML G +P + ++ L+ K
Sbjct: 34 CGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK 93
Query: 292 TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
+ + L+E M+ G N T + L+ + +++ A+ L M +L H PS
Sbjct: 94 MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE-PSIV 152
Query: 352 SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
++ +++ C RV +A ++V G P Y + D LC
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 117/258 (45%), Gaps = 27/258 (10%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++K++ + G + A +M++ + D Y+ +I LC+ G+ A L +ME+ G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRR------------------------RLYE 262
F D YT LI +C G K R +L E
Sbjct: 278 F--KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
A L + M+ +G PD VTY +LIDG CK ++ +A + + M KGC PN T++ LI
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 323 YYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNV 382
Y N ID +E+ R M L + + +Y +I CE G++ A E+V
Sbjct: 396 GYCKANLIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 383 PREYTYRLVCDKLCLAGE 400
P +Y+++ D LC GE
Sbjct: 455 PDIVSYKILLDGLCDNGE 472
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+A I C +K +G EA M Q PD Y +LI C+ +A +L+
Sbjct: 321 SALIDCFVK----EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M G C P+ T+ ILI+ YC+ ++ + LFR M +G V D V
Sbjct: 377 LMVSKG--CGPNIRTFNILINGYCKANLID-----------DGLELFRKMSLRGVVADTV 423
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI G C+ +++ A ELF++M + P+ V+Y L+ E ++A+E+ +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 341 QR----LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
++ L+ GI Y IIH +C A +V +AW L G P TY ++ LC
Sbjct: 484 EKSKMELDIGI-----YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 397 LAG 399
G
Sbjct: 539 KKG 541
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 18/247 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T+ L+ L G S+A L RM + +P+ Y ++ +C+ G A A LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ME DA Y+I+I C+ G L A LF M KGF D+
Sbjct: 236 RKMEERKI--KLDAVKYSIIIDGLCKDG-----------SLDNAFNLFNEMEIKGFKADI 282
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+ Y LI G C R +L DM K+ P+ V + +LI + ++ A E+ ++
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
M + GI P + +YT +I C+ ++ +A L +V G P T+ ++ + C A
Sbjct: 343 M--IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 399 G--EDGL 403
+DGL
Sbjct: 401 NLIDDGL 407
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 14/236 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T + LI L +G SEA RM + +P + N L+ LC G + A L++
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M GF P+ TY ++ C+ G + A L R M + D V
Sbjct: 202 RMVETGF--QPNEVTYGPVLKVMCKSG-----------QTALAMELLRKMEERKIKLDAV 248
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
Y+ +IDG CK + A LF +M+ KG + + Y +LIR + D ++LRDM
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ P +++ +I + G++ EA E++ G P TY + D C
Sbjct: 309 IK-RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 14/216 (6%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M + RP + ++ L + R + L +QMEL G + +T +I+I+
Sbjct: 60 FQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI--AHNLYTLSIMINCC 117
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
CR CRK + G++ +L G+ PD VT++ LI+G C R+ ALEL +
Sbjct: 118 CR------CRKLSLA-FSAMGKIIKL----GYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M + G P +T ++L+ ++ AV ++ M P+ +Y P++ +C++
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ-PNEVTYGPVLKVMCKS 225
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
G+ A A L ++ + Y ++ D LC G
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI+ E G A F M RPDI +Y L+ LC G +A + E
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++E D Y I+I C ++ +A LF + KG PDV
Sbjct: 482 KIEKSKM--ELDIGIYNIIIHGMCNAS-----------KVDDAWDLFCSLPLKGVKPDVK 528
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN +I G CK + A LF M++ G +PN TY+ LIR + + ++ +++ ++
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+R G +S ++ + GR+ +++
Sbjct: 589 KRC--GFSVDASTVKMVVDMLSDGRLKKSF 616
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD T++ LI+ C G R+ EA L M+ G P ++T NAL++G C
Sbjct: 140 PDTVTFSTLINGLCLEG-----------RVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS 350
++ A+ L + M + G PN VTY +++ + + A+E+LR M+ + +
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL-DA 247
Query: 351 SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG--EDG--LLGD 406
Y+ II LC+ G + A++ E+ G Y + C AG +DG LL D
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 407 EVHERI 412
+ +I
Sbjct: 308 MIKRKI 313
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 155 RNNPITTATIT--CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
RN I+ T+T +I L E GLA EA M + PD +YNTLI C+VGNF
Sbjct: 153 RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 212
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
RAK L++++ + T+TIL+SSY L+ +R M+
Sbjct: 213 VRAKALVDEIS------ELNLITHTILLSSY--------------YNLHAIEEAYRDMVM 252
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
GF PDVVT++++I+ CK ++ L +M++ PN VTY +L+ N
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 333 AVEVLRDMQRLNHGIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
A+ + M + GIP YT ++ L +AG + EA L++ VP TY +
Sbjct: 313 ALALYSQM--VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 392 CDKLCLAGE 400
D LC AG+
Sbjct: 371 VDGLCKAGD 379
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T + +I L + G E L M++ P+ Y TL+ +L + + A L
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
QM + G P D YT+L+ + G L EA + F+++L VP+VV
Sbjct: 319 QMVVRGI--PVDLVVYTVLMDGLFKAG-----------DLREAEKTFKMLLEDNQVPNVV 365
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY AL+DG CK + A + M +K PN VTY S+I Y ++ AV +LR M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGR 365
+ N +P+ +Y +I L +AG+
Sbjct: 426 EDQNV-VPNGFTYGTVIDGLFKAGK 449
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 167 LIKLLGEQGLA-SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
LI GL + SL + +M PD+ A N LI++ C+VG + A LL +
Sbjct: 99 LIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVI- 157
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
D TY +IS C HG+ EA + M+ G +PD V+YN L
Sbjct: 158 ----SIDTVTYNTVISGLCEHGLAD-----------EAYQFLSEMVKMGILPDTVSYNTL 202
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
IDG CK RA L +++ + N +T+ L+ Y + I+ E RDM ++
Sbjct: 203 IDGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYYNLHAIE---EAYRDMV-MSG 254
Query: 346 GIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
P +++ II+ LC+ G+V E L E+ + P TY + D L
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 37/268 (13%)
Query: 162 ATITCLIKLLGEQGLASEASLTFY-RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
AT ++ +QG SE L + +MK +P + + N ++ LC G A +L
Sbjct: 574 ATFNIMMNSQRKQG-DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 632
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHG---------------------------ILTGCR 253
QM L P+ TY I + + +H I T C+
Sbjct: 633 QMML--MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
++ A + M +GF+PD VT+N+L+ G +++AL + M + G +PN
Sbjct: 691 LGMTKK---AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSF 372
TY+++IR S I + L +M+ + G+ P +Y +I + G + + +
Sbjct: 748 VATYNTIIRGLSDAGLIKEVDKWLSEMK--SRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAGE 400
E++ G VP+ TY ++ + G+
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGK 833
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 51/254 (20%)
Query: 155 RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR 214
R P+ T L+ L + G EA TF + + + P++ Y L+ LC+ G+ +
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
A+F++ QM P+ TY+ +I+ Y + G+L EA L R M +
Sbjct: 383 AEFIITQMLEKS--VIPNVVTYSSMINGYVKKGMLE-----------EAVSLLRKMEDQN 429
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALEL--------------------------------- 301
VP+ TY +IDG K + + A+EL
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489
Query: 302 --FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIH 358
+DM KG +++ Y SLI + + + A+ +MQ G+P SY +I
Sbjct: 490 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE--RGMPWDVVSYNVLIS 547
Query: 359 ALCEAGRVAEAWSF 372
+ + G+V W++
Sbjct: 548 GMLKFGKVGADWAY 561
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 52/238 (21%)
Query: 189 QYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGI 248
Y + + YNTLI LC++G +A ++ ME GF PD T+ L+ HG
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI--PDTVTFNSLM-----HGY 723
Query: 249 LTG--CRKA--TRRRLYEAG-------------------------RLFRLMLFKGFVPDV 279
G RKA T + EAG + M +G PD
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TYNALI G K ++ ++ ++ +M G P TY+ LI ++ ++ +A E+L++
Sbjct: 784 FTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Query: 340 MQRLNHGI-PSSSSYTPIIHALC------------EAGRVAEAWSFLVELV-DGGNVP 383
M + G+ P++S+Y +I LC +A +AEA L E+V + G +P
Sbjct: 844 MGK--RGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 38/340 (11%)
Query: 66 LRQRNLNDEHRKLHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCRE 125
+R + L DE +L+ + ++Y + H ++ R + SGF D VT
Sbjct: 213 VRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV--------MSGFDPDVVTFSS 264
Query: 126 MACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFY 185
+ L + K L G L + + + N+ T T L+ L + + A +
Sbjct: 265 IINRLCKGG--KVLEGGLLLREMEEMSVYPNH----VTYTTLVDSLFKANIYRHALALYS 318
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARA----KFLLEQMELPGFWCPPDAFTYTILIS 241
+M D+ Y L+ L + G+ A K LLE ++P + TYT L+
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP------NVVTYTALVD 372
Query: 242 SYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALEL 301
C+ G L+ A + ML K +P+VVTY+++I+G K ++ A+ L
Sbjct: 373 GLCKAGDLS-----------SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 302 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS-YTPIIHAL 360
M+ + PN TY ++I + + A+E+ ++M+ + G+ ++ +++ L
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI--GVEENNYILDALVNHL 479
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
GR+ E + ++V G + Y + D G+
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALEL-FEDMKKKGCAPNRVT 316
RLY A R M G VPD +N+LI + + L + M G +P+
Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 131
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVE 375
+ LI + + A+ +LR N I + +Y +I LCE G EA+ FL E
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLR-----NRVISIDTVTYNTVISGLCEHGLADEAYQFLSE 186
Query: 376 LVDGGNVPREYTYRLVCDKLCLAGE---DGLLGDEVHE 410
+V G +P +Y + D C G L DE+ E
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 156/393 (39%), Gaps = 67/393 (17%)
Query: 63 RTPLRQRNLNDEHRKLHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVT 122
R P + LN+ L GL++ + D +LG R FF W G+ H
Sbjct: 80 RVPKLELALNESGIDLRPGLIIRVLSRCGDAG--NLGYR----FFLWATKQPGYFHSYEV 133
Query: 123 CREMACVLVRANATKTLWGFLKETANKH-------------HNNHRNNPITTA------- 162
C+ M +L + +WG ++E + N + A
Sbjct: 134 CKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEM 193
Query: 163 ----------TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
CL+ L + G EAS F M++ P++R + +L+Y CR G
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKF-PPNLRYFTSLLYGWCREGKL 252
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG-------ILTGCRK----------- 254
AK +L QM+ G PD +T L+S Y G ++ RK
Sbjct: 253 MEAKEVLVQMKEAGL--EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 255 -------ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
T +R+ EA R+F M G D+VTY ALI G CK I + + +DM+K
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN-HGIPSSSSYTPIIHALCEAGRV 366
KG P++VTY ++ + + + +E++ M+R H P Y +I C+ G V
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH--PDLLIYNVVIRLACKLGEV 428
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
EA E+ G P T+ ++ + G
Sbjct: 429 KEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 113/292 (38%), Gaps = 69/292 (23%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN-FARAKFLLE 220
T L+ G ++A M++ P++ Y LI ALCR A +
Sbjct: 272 VVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFV 331
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHG-------ILTGCRKA-----------------T 256
+ME G C D TYT LIS +C+ G +L RK
Sbjct: 332 EMERYG--CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK 389
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
+ + E L M +G PD++ YN +I CK ++ A+ L+ +M+ G +P T
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT 449
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS-------------------------- 350
+ +I +++ + A ++M ++ GI S+
Sbjct: 450 FVIMINGFTSQGFLIEACNHFKEM--VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVW 507
Query: 351 --------------SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
S++T IHAL G V EA S+ +++++ +P+ TY
Sbjct: 508 SCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY 559
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 16/243 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T LI L G S+AS M + P++ +N LI A + G A+ L E
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M PD TY +LI+ +C H RL EA ++F+ M+ K +P++
Sbjct: 353 EMIQRSI--DPDTITYNLLINGFCMH-----------NRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI+G CK R++ +ELF +M ++G N VTY ++I+ + + D A V + M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 341 QRLNHGIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+++ +P+ +Y+ ++H LC G++ A L + Y + + +C AG
Sbjct: 460 --VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 400 EDG 402
+ G
Sbjct: 518 KVG 520
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 16/245 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI L ASEA +M Q C+PD+ Y T++ LC+ G+ A LL
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ME + + +I S C++ R + A LF M KG P+VV
Sbjct: 248 KMEAARI--KANVVIFNTIIDSLCKY-----------RHVEVAVDLFTEMETKGIRPNVV 294
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN+LI+ C R A L +M +K PN VT+++LI + ++ A ++ +M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG- 399
+ + P + +Y +I+ C R+ EA +V +P TY + + C
Sbjct: 355 IQRSID-PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 400 -EDGL 403
EDG+
Sbjct: 414 VEDGV 418
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T +I+ + G A + F +M DI Y+ L++ LC G A + +
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK 492
Query: 221 -----QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
+MEL + F Y +I C+ G ++ EA LF + K
Sbjct: 493 YLQKSEMEL-------NIFIYNTMIEGMCKAG-----------KVGEAWDLFCSLSIK-- 532
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA-- 333
PDVVTYN +I G C +Q A +LF MK+ G PN TY++LIR + + DRA
Sbjct: 533 -PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR--ANLRDCDRAAS 589
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
E++++M+ + G +S ++ + GR+ +++
Sbjct: 590 AELIKEMR--SSGFVGDASTISLVTNMLHDGRLDKSF 624
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 16/224 (7%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S A +M + PDI ++L+ C + A L++QM G+ PD FT+T
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY--KPDTFTFT 192
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
LI HG+ + EA L M+ +G PD+VTY +++G CK I
Sbjct: 193 TLI-----HGLF------LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPI 356
AL L M+ N V ++++I ++ AV++ +M+ GI P+ +Y +
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME--TKGIRPNVVTYNSL 299
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
I+ LC GR ++A L +++ P T+ + D G+
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P I +N L+ A+ ++ F L EQM+ G D +TY+I I+ +CR
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI--SHDLYTYSIFINCFCR-------- 130
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R +L A + M+ G+ PD+VT ++L++G C + RI A+ L + M + G P+
Sbjct: 131 ---RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDM-QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
T+ +LI N+ AV ++ M QR P +Y +++ LC+ G + A +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--PDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 373 LVELVDGGNVPREYTYRLVCDKLC 396
L ++ + + D LC
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLC 269
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+ D+ Y+ I CR + A +L +M G+ PD T + L++ YC
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY--EPDIVTLSSLLNGYCH 165
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
+R+ +A L M+ G+ PD T+ LI G + A+ L + M
Sbjct: 166 S-----------KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ--RLNHGIPSSSSYTPIIHALCEA 363
++GC P+ VTY +++ +ID A+ +L M+ R+ + + II +LC+
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV---IFNTIIDSLCKY 271
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
V A E+ G P TY + + LC G
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G D+ TY+ I+ C+ ++ AL + M K G P+ VT SL+ Y + I A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
V ++ M + + P + ++T +IH L + +EA + + ++V G P TY V +
Sbjct: 173 VALVDQMVEMGYK-PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 394 KLCLAGE 400
LC G+
Sbjct: 232 GLCKRGD 238
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 27/265 (10%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ A ++ L++ L ++G EA R+ + P++ YN LI +LC+ F A+ L
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGIL------------TGCRKATR---------- 257
++M G P+ TY+ILI +CR G L TG + +
Sbjct: 391 DRMGKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 258 --RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
+ A M+ K P VVTY +L+ G C +I +AL L+ +M KG AP+
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
T+ +L+ I AV++ +M N P+ +Y +I CE G +++A+ FL E
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK-PNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 376 LVDGGNVPREYTYRLVCDKLCLAGE 400
+ + G VP Y+YR + LCL G+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQ 592
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 14/239 (5%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T + LI + +G A M + + YN+LI C+ G+ + A+ + +
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M P TYT L+ YC G ++ +A RL+ M KG P + T
Sbjct: 463 MINKKL--EPTVVTYTSLMGGYCSKG-----------KINKALRLYHEMTGKGIAPSIYT 509
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+ L+ G + I+ A++LF +M + PNRVTY+ +I Y ++ +A E L++M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+P + SY P+IH LC G+ +EA F+ L G E Y + C G+
Sbjct: 570 E-KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 35/303 (11%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T L+ L GL +A F M +++ +P+ YN +I C G+ ++A L++M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 223 ELPGFWCPPDAFTYTILI--------------------------SSYCRHGILTG-CRKA 255
G PD ++Y LI + C G+L G CR+
Sbjct: 569 TEKGI--VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
+L EA + + M+ +G D+V Y LIDG K + L ++M +G P+ V
Sbjct: 627 ---KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLV 374
Y S+I S T + A + M +N G +P+ +YT +I+ LC+AG V EA
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLM--INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKG 434
++ +VP + TY D L D E+H I G+ M+ R+G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 435 YPE 437
E
Sbjct: 802 RIE 804
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+PD+ Y TL+Y LC+V F ++++M F P +A +SS ++ G
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF-SPSEA-----AVSS-----LVEGL 342
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
RK R ++ EA L + ++ G P++ YNALID CK + A LF+ M K G P
Sbjct: 343 RK--RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWS 371
N VTY LI + ++D A+ L +M ++ G+ S Y +I+ C+ G ++ A
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEM--VDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 372 FLVELVDGGNVPREYTYRLVCDKLCLAGE 400
F+ E+++ P TY + C G+
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 140/336 (41%), Gaps = 41/336 (12%)
Query: 76 RKLHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANA 135
+ +H +L+G DP LGLR FF ++ H GF H + + LV+AN
Sbjct: 69 KTVHVEEILIG--TIDDPK---LGLR----FFNFLGLHRGFDHSTASFCILIHALVKAN- 118
Query: 136 TKTLWGFLKETANKHHNNHRNNPITTATITCLIK----------LLGEQGLAS----EAS 181
W + + + +C K LL + + S +
Sbjct: 119 --LFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGV 176
Query: 182 LTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILI 240
L F M + P++R + L++ L + +F A L M G PD + YT +I
Sbjct: 177 LVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGI--RPDVYIYTGVI 234
Query: 241 SSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALE 300
S C + L A + M G ++V YN LIDG CK ++ A+
Sbjct: 235 RSLCE-----------LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVG 283
Query: 301 LFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHAL 360
+ +D+ K P+ VTY +L+ E + +E++ +M L PS ++ + ++ L
Sbjct: 284 IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS-PSEAAVSSLVEGL 342
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ G++ EA + + +VD G P + Y + D LC
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 19/244 (7%)
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
GLA E F M RPD+ Y +I +LC + + +RAK ++ ME G C +
Sbjct: 209 GLAME---LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG--CDVNIV 263
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
Y +LI C+ +++++EA + + + K PDVVTY L+ G CK
Sbjct: 264 PYNVLIDGLCK-----------KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSY 353
+ LE+ ++M +P+ SL+ +I+ A+ +++ + ++ G+ P+ Y
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK--RVVDFGVSPNLFVY 370
Query: 354 TPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIK 413
+I +LC+ + EA + G P + TY ++ D C G+ + E +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 414 NGMR 417
G++
Sbjct: 431 TGLK 434
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 182 LTFYRMKQYHCR---PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
L F +K+ H R PD Y ++I A + G+F A + + M G C P+ TYT
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG--CVPNEVTYTA 722
Query: 239 LISSYCRHGILT---------------------GCRKATRRR----LYEAGRLFRLMLFK 273
+I+ C+ G + GC + + +A L +L K
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-K 781
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G + + TYN LI G C+ RI+ A EL M G +P+ +TY ++I N++ +A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 334 VEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
+E+ M GI P +Y +IH C AG + +A E++ G +P T R
Sbjct: 842 IELWNSMTE--KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 115/294 (39%), Gaps = 55/294 (18%)
Query: 141 GFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYN 200
GF+ E NK + P T T T L+ +G ++A ++ M P I +
Sbjct: 458 GFMAEMINK-----KLEP-TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 201 TLIYALCRVGNFARAKFLLEQMELPGFW-CPPDAFTYTILISSYCRHGILTGCRKATRRR 259
TL+ L R G A L +M W P+ TY ++I YC G ++
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEM---AEWNVKPNRVTYNVMIEGYCEEGDMS--------- 559
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
+A + M KG VPD +Y LI G C T + A + + K C N + Y
Sbjct: 560 --KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 320 LIRYYSATNEIDRAVEVLRDM------------------------QRLNHGI-------- 347
L+ + +++ A+ V ++M ++L G+
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 348 --PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
P YT +I A + G EA+ +++ G VP E TY V + LC AG
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 117/296 (39%), Gaps = 66/296 (22%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T +I+ E+G S+A M + PD +Y LI+ LC G + AK ++
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 222 MELPGFWCPPDAFTYTILISSYCRHG--------------------------ILTGCRKA 255
+ C + YT L+ +CR G ++ G K
Sbjct: 603 LHKGN--CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 256 TRRRLY---------------------------------EAGRLFRLMLFKGFVPDVVTY 282
R+L+ EA ++ LM+ +G VP+ VTY
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID--RAVEVLRDM 340
A+I+G CK + A L M+ PN+VTY + + E+D +AVE+ +
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAI 779
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
L + ++++Y +I C GR+ EA + ++ G P TY + ++LC
Sbjct: 780 --LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 13/181 (7%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T T +I L + G +EA + +M+ P+ Y + L + + L
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
L G + TY +LI +CR G R+ EA L M+ G PD +T
Sbjct: 778 AILKGLL--ANTATYNMLIRGFCRQG-----------RIEEASELITRMIGDGVSPDCIT 824
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y +I+ C+ +++A+EL+ M +KG P+RV Y++LI E+ +A E+ +M
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Query: 342 R 342
R
Sbjct: 885 R 885
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 258 RRLYEAGRLFRLMLFK-GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
RR+ + +F++M+ K +P+V T +AL+ G K A+ELF DM G P+
Sbjct: 170 RRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYI 229
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y +IR ++ RA E++ M+ + + Y +I LC+ +V EA +L
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDV-NIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 377 VDGGNVPREYTYRLVCDKLCLAGE 400
P TY + LC E
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQE 312
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 106/225 (47%), Gaps = 17/225 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI + G +AS F M + P++ YN L+ CR G +AK LL++M + G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
P+A TY +I YC+ G L EA RLF M KG VPD Y L+
Sbjct: 693 L--HPNAVTYCTIIDGYCKSG-----------DLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR---DMQRL 343
DGCC+ ++RA+ +F KKGCA + +++LI + + + EVL D
Sbjct: 740 DGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
G P+ +Y +I LC+ G + A ++ + +P TY
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 123/292 (42%), Gaps = 64/292 (21%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LIK + +A MK+ PDI YN+LI L + A+ L +M
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 225 PGFWCPPDAFTY-----------------------------------TILISSYCR---- 245
G P+AFTY T LI+ YC+
Sbjct: 516 NGL--KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 246 ------------HGILTGCRKAT--------RRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
GIL + T ++ +A +FR M KG PDV +Y L
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
I+G K +Q+A +F++M ++G PN + Y+ L+ + + EI++A E+L +M
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV--K 691
Query: 346 GI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
G+ P++ +Y II C++G +AEA+ E+ G VP + Y + D C
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 21/242 (8%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T L+ L + +A F M+ PD+ +Y LI ++GN +A + ++M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G P+ Y +L+ +CR G + +A L M KG P+ VTY
Sbjct: 654 VEEGL--TPNVIIYNMLLGGFCRSG-----------EIEKAKELLDEMSVKGLHPNAVTY 700
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+IDG CK+ + A LF++MK KG P+ Y +L+ N+++RA+ + ++
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Query: 343 LNHGIPSSSS-YTPIIHALCEAGRVAEAWSFLVELVDGG----NVPREYTYRLVCDKLCL 397
G SS++ + +I+ + + G+ L L+DG P + TY ++ D LC
Sbjct: 761 ---GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 398 AG 399
G
Sbjct: 818 EG 819
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 27/254 (10%)
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
C I ++ ++G+ +A F M P +AY +LI CR N + LL +M+
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 226 GFWCPPDAFTYTILISSYCRHG------------ILTGCRKAT------------RRRLY 261
P +TY ++ C G I +GCR R
Sbjct: 412 NIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
+A R+ + M +G PD+ YN+LI G K R+ A +M + G PN TY + I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
Y +E A + +++M+ +P+ T +I+ C+ G+V EA S +VD G
Sbjct: 530 SGYIEASEFASADKYVKEMRECGV-LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 382 VPREYTYRLVCDKL 395
+ TY ++ + L
Sbjct: 589 LGDAKTYTVLMNGL 602
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 64/250 (25%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR------------- 245
Y+ LI LC++ AK LL +M+ G D TY++LI +
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLG--VSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 246 ---HGILTG--------CRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
HGI C + + +A LF M+ G +P Y +LI+G C+
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 295 IQRALELFEDMKKK-----------------------------------GCAPNRVTYDS 319
+++ EL +MKK+ GC PN V Y +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
LI+ + + A+ VL++M+ GI P Y +I L +A R+ EA SFLVE+V+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKE--QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 379 GGNVPREYTY 388
G P +TY
Sbjct: 516 NGLKPNAFTY 525
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
RN I+ T ++K + G A M CRP++ Y TLI + F
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
A +L++M+ G PD F C + ++ G KA +R+ EA M+
Sbjct: 470 DAMRVLKEMKEQGI--APDIF---------CYNSLIIGLSKA--KRMDEARSFLVEMVEN 516
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G P+ TY A I G + A + ++M++ G PN+V LI Y ++ A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 334 VEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
R M ++ GI + +YT +++ L + +V +A E+ G P ++Y ++
Sbjct: 577 CSAYRSM--VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 393 D 393
+
Sbjct: 635 N 635
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 45/262 (17%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGIL---- 249
P+ Y T+I C+ G+ A A L ++M+L G PD+F YT L+ CR +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL--VPDSFVYTTLVDGCCRLNDVERAI 752
Query: 250 -------TGCRKATR------RRLYEAGR-------LFRLM--LFKGF-VPDVVTYNALI 286
GC +T +++ G+ L RLM F F P+ VTYN +I
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM-QRLNH 345
D CK ++ A ELF M+ P +TY SL+ Y +++ R E+ + +
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY---DKMGRRAEMFPVFDEAIAA 869
Query: 346 GI-PSSSSYTPIIHALCEAGRVAEAWSFLVEL-----VDGGNVPREYTYRLVCDKLCLAG 399
GI P Y+ II+A + G +A + ++ VD G T R + G
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 400 EDGLLGDEVHERI-KNGMRKRY 420
E EV E++ +N +R +Y
Sbjct: 930 E-----MEVAEKVMENMVRLQY 946
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 140/381 (36%), Gaps = 75/381 (19%)
Query: 102 KSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT- 160
K L FF WV++ +VT +++ A F K + RN P+
Sbjct: 79 KLLSFFNWVDSQ------KVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAE 132
Query: 161 --TATITCLIKLLGEQGLASEASLTF--YRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
++ + C + +G+ + F Y K Y + +++ + L V +R K
Sbjct: 133 VWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGY-IEEAVFVFSSSM-GLELVPRLSRCK 190
Query: 217 FLLEQM----ELPGFW----------CPPDAFTYTILISSYCRHG-------ILTGCRKA 255
LL+ + L FW D TY +LI ++CR G +L K
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 256 TRRRLYEAGRLFRL---MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
R +L M+ KG VP TY+ LIDG CK R++ A L +M G +
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-------------------------- 346
+ TY LI D A ++ +M ++HG
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEM--VSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 347 ----------IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
IP + +Y +I C V + + LVE+ V YTY V +C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 397 LAGEDGLLGDEVHERIKNGMR 417
+G+ + V E I +G R
Sbjct: 429 SSGDLDGAYNIVKEMIASGCR 449
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 21/319 (6%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
+R++L+F + S D TC + L+ +N FL ++ + HR++
Sbjct: 2 VREALQFLSRLRKSSNLP-DPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ + C LG+ A + + M ++ C PD+ +YN+LI CR G+ A +L
Sbjct: 61 SVVSFVCK---LGQVKFAED---IVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVL 114
Query: 220 EQMELP-GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
E + GF C PD ++ L + + ++ ++ + ++ ++ K P+
Sbjct: 115 ESLRASHGFICKPDIVSFNSLFNGF------------SKMKMLDEVFVYMGVMLKCCSPN 162
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
VVTY+ ID CK+ +Q AL+ F MK+ +PN VT+ LI Y +++ AV + +
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+M+R+ + + +YT +I C+ G + A +V+ P Y + D
Sbjct: 223 EMRRVRMSL-NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 399 GEDGLLGDEVHERIKNGMR 417
G+ + + + GMR
Sbjct: 282 GDSDNAMKFLAKMLNQGMR 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 141 GFLKETANKHHN-NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHC--RPDIR 197
G +K N +H R ++ +I + + G EA + Y C + +
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV-------YFCIEKANDV 404
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
Y LI ALC+ G+F + L ++ G PD F YT I+ C+ G
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGL--VPDKFMYTSWIAGLCKQG---------- 452
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
L +A +L M+ +G + D++ Y LI G + A ++F++M G +P+ +
Sbjct: 453 -NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQR 342
D LIR Y + A ++L DMQR
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQR 536
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 42/268 (15%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T TCLI + G A + M++ ++ Y LI C+ G RA+ +
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M P++ YT +I + + G K + L + RL D+
Sbjct: 258 RMVED--RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL-----------DIT 304
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV---- 336
Y +I G C +++ A E+ EDM+K P+ V + +++ Y + + AV +
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 337 --------LRDMQRLNHGIPSSSS-----------------YTPIIHALCEAGRVAEAWS 371
+ + + GI + YT +I ALC+ G E
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVER 424
Query: 372 FLVELVDGGNVPREYTYRLVCDKLCLAG 399
++ + G VP ++ Y LC G
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 23/218 (10%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T +I ++G + A +M R DI AY +I LC G A ++E ME
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
PD +T ++++Y + G R+ A ++ ++ +GF PDVV +
Sbjct: 332 SDL--VPDMVIFTTMMNAYFKSG-----------RMKAAVNMYHKLIERGFEPDVVALST 378
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
+IDG K ++ A+ F K N V Y LI + +EV R +++
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEK-----ANDVMYTVLIDALCKEGDF---IEVERLFSKIS 430
Query: 345 HG--IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+P YT I LC+ G + +A+ +V G
Sbjct: 431 EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Query: 101 RKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
+ + FF W GF HD T M +L + +T+ L+E K +T
Sbjct: 176 KPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK-------GLLT 228
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T +K +A F MK+Y + + N L+ +L R A+ L +
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+++ P+ TYT+L++ +CR R L EA R++ M+ +G PD+V
Sbjct: 289 KLKER---FTPNMMTYTVLLNGWCR-----------VRNLIEAARIWNDMIDQGLKPDIV 334
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
+N +++G ++ + A++LF MK KG PN +Y +IR + + ++ A+E DM
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 341 QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
++ G+ P ++ YT +I ++ + L E+ + G+ P TY
Sbjct: 395 --VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
+ + LI L + G A+E FY MK+ C D RAYN +I C+ G +A LLE+M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 223 ELPGFWCPPDAFTYTILISSYCR--------------------------HGILTGCRKAT 256
+ GF P TY +I + ++ G K
Sbjct: 614 KTKGF--EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
R + EA + ++ KG P++ T+N+L+D K I AL F+ MK+ C PN+VT
Sbjct: 672 R--IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVE 375
Y LI + ++A ++MQ+ G+ PS+ SYT +I L +AG +AEA +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQK--QGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 376 LVDGGNVPREYTYRLVCDKL 395
G VP Y + + L
Sbjct: 788 FKANGGVPDSACYNAMIEGL 807
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LIK G + + M +C PD++ NT + + + G + + + E+++
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
F PDA +Y+ILI HG++ + YE LF M +G V D YN
Sbjct: 546 RRF--VPDARSYSILI-----HGLI---KAGFANETYE---LFYSMKEQGCVLDTRAYNI 592
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ--- 341
+IDG CK ++ +A +L E+MK KG P VTY S+I + + +D A + + +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 342 -RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
LN I Y+ +I + GR+ EA+ L EL+ G P YT+ + D L A E
Sbjct: 653 IELNVVI-----YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 142/366 (38%), Gaps = 76/366 (20%)
Query: 95 RVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETAN--KHHN 152
+VD+ + FF +EA+ G DEVT M VL +AN L E +H
Sbjct: 253 KVDMAWK----FFHEIEAN-GLKPDEVTYTSMIGVLCKANR-------LDEAVEMFEHLE 300
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
+R P T A T +I G G EA R + P + AYN ++ L ++G
Sbjct: 301 KNRRVPCTYAYNT-MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC-------------------- 252
A + E+M+ P+ TY ILI CR G L
Sbjct: 360 DEALKVFEEMKKDA---APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 253 ----RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
R ++L EA +F M +K PD +T+ +LIDG K R+ A +++E M
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM---------QRLN--------------- 344
C N + Y SLI+ + + ++ +DM Q LN
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 345 ----------HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDK 394
+P + SY+ +IH L +AG E + + + G V Y +V D
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 395 LCLAGE 400
C G+
Sbjct: 597 FCKCGK 602
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 24/294 (8%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
+ +++E+FRW E + H + + V+ R L L E + N
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN--- 134
Query: 160 TTATITCLIKLLG--EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
TC+ +LG + E M+++ RP AY TLI A V +
Sbjct: 135 -----TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
L +QM+ G+ P +T LI + + G R+ A L M
Sbjct: 190 LFQQMQELGY--EPTVHLFTTLIRGFAKEG-----------RVDSALSLLDEMKSSSLDA 236
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
D+V YN ID K ++ A + F +++ G P+ VTY S+I N +D AVE+
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 338 RDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
+++ N +P + +Y +I AG+ EA+S L G++P Y +
Sbjct: 297 EHLEK-NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+EA + F MK+ C P+ Y LI LC+V F +A ++M+ G P +YT
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM--KPSTISYT 766
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
+IS + G + EAG LF G VPD YNA+I+G R
Sbjct: 767 TMISGLAKAG-----------NIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMD 815
Query: 298 ALELFEDMKKKG 309
A LFE+ +++G
Sbjct: 816 AFSLFEETRRRG 827
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 23/211 (10%)
Query: 191 HCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILT 250
HC P+ +YN+L+ + R NF +L +M + GF P T C +L
Sbjct: 96 HC-PE--SYNSLLLVMARCRNFDALDQILGEMSVAGF--GPSVNT--------CIEMVL- 141
Query: 251 GCRKATR-RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG 309
GC KA + R Y+ ++ R F+ P Y LI L LF+ M++ G
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFR---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 310 CAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ--RLNHGIPSSSSYTPIIHALCEAGRVA 367
P + +LIR ++ +D A+ +L +M+ L+ I Y I + + G+V
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI---VLYNVCIDSFGKVGKVD 255
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
AW F E+ G P E TY + LC A
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKA 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEA-GRLFRLMLFKGFVPDVVTYNALIDGC 289
P+++ +L+ + CR+ ++A ++ M GF P V T ++ GC
Sbjct: 98 PESYNSLLLVMARCRN--------------FDALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
K +++ ++ + M+K P Y +LI +SA N D + + + MQ L + P+
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYE-PT 202
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVH 409
+T +I + GRV A S L E+ Y + D G+ + H
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 410 ERIKNGMR 417
E NG++
Sbjct: 263 EIEANGLK 270
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 145/340 (42%), Gaps = 37/340 (10%)
Query: 87 PAAYRDPHRVDL---GLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFL 143
P+ Y RV L ++ SLE FR + + GF TC + +V++ ++W FL
Sbjct: 163 PSVYDILIRVYLREGMIQDSLEIFRLMGLY-GFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 144 KETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLI 203
KE R AT LI +L +G ++S +M++ P I YNT++
Sbjct: 222 KEMLK------RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 204 YALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG-------ILTGCRK-- 254
+ C+ G F A LL+ M+ G D TY +LI CR +L RK
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 255 ---------------ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
+ ++ A +L ML G P+ VT+NALIDG + AL
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHA 359
++F M+ KG P+ V+Y L+ E D A M+R N +YT +I
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR-NGVCVGRITYTGMIDG 452
Query: 360 LCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
LC+ G + EA L E+ G P TY + + C G
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 142/347 (40%), Gaps = 56/347 (16%)
Query: 89 AYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETAN 148
A D H + +++L+ F +EA G T EV+ + L + GF
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGF------ 430
Query: 149 KHHNNHRNNP-ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALC 207
+ RN + T T +I L + G EA + M + PDI Y+ LI C
Sbjct: 431 -YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 208 RVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLF 267
+VG F AK ++ ++ G P+ Y+ LI + CR G L EA R++
Sbjct: 490 KVGRFKTAKEIVCRIYRVGL--SPNGIIYSTLIYNCCRMGCLK-----------EAIRIY 536
Query: 268 RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
M+ +G D T+N L+ CK ++ A E M G PN V++D LI Y +
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 328 NEIDRAVEVLRDMQRLN-------------------------------HGIPSSSS---Y 353
E +A V +M ++ H +P++ Y
Sbjct: 597 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656
Query: 354 TPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ A+C++G +A+A S E+V +P YTY + LC G+
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACV----LVRANATKTLWGFLKETANKHHNNH---- 154
+L+F +WV G D + ++ C+ LVRA LKE + +
Sbjct: 93 ALKFLKWVVKQPGLETDHIV--QLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 150
Query: 155 ---------RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYA 205
+NP + LI++ +G+ ++ F M Y P + N ++ +
Sbjct: 151 ALMTTYRLCNSNP---SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 207
Query: 206 LCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGR 265
+ + G L++M L CP D T+ ILI+ C G ++
Sbjct: 208 VVKSGEDVSVWSFLKEM-LKRKICP-DVATFNILINVLCAEG-----------SFEKSSY 254
Query: 266 LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
L + M G+ P +VTYN ++ CK R + A+EL + MK KG + TY+ LI
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 326 ATNEIDRAVEVLRDM-QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
+N I + +LRDM +R+ H P+ +Y +I+ G+V A L E++ G P
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIH--PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 385 EYTYRLVCD 393
T+ + D
Sbjct: 373 HVTFNALID 381
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 187 MKQYHCRP---DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
+K H P D YNTL+ A+C+ GN A+A L +M PD++TYT LIS
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL--PDSYTYTSLISGL 698
Query: 244 CRHG-----ILTGCRKATRRRL-------------------YEAGRLFRLMLFK-GFVPD 278
CR G IL R + ++AG FR + G PD
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+VT NA+IDG + +I++ +L +M + PN TY+ L+ YS ++ + + R
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+ LN +P + ++ +CE+ + L + G YT+ ++ K C
Sbjct: 819 SII-LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 399 GE 400
GE
Sbjct: 878 GE 879
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T ++ +L E+ + + M + P+ R Y LI LCRVG+ A + E+M
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ CPP+ ++ + L C KA EA L R ML VP + ++
Sbjct: 961 -IAHKICPPNVAESAMVRA-------LAKCGKAD-----EATLLLRFMLKMKLVPTIASF 1007
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
L+ CCK + ALEL M G + V+Y+ LI A ++ A E+ +M+
Sbjct: 1008 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1067
Query: 343 LNHGIPSSSSYTPIIHAL 360
+ + ++++Y +I L
Sbjct: 1068 -DGFLANATTYKALIRGL 1084
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 18/230 (7%)
Query: 187 MKQYHCRP---DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
+K + CR D +N LI C G A L++ M G D T ++S
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD--TCDAMVSVL 909
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
R+ R E+ + M +G P+ Y LI+G C+ I+ A + E
Sbjct: 910 NRN-----------HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
+M P V +++R + + D A +LR M ++ +P+ +S+T ++H C+
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKN 1017
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIK 413
G V EA V + + G +Y ++ LC G D L E++E +K
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG-DMALAFELYEEMK 1066
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PDI N +I R+G + LL +M P+ TY IL+ Y +
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--GGPNLTTYNILLHGYSK-------- 806
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R+ + + L+R ++ G +PD +T ++L+ G C++ ++ L++ + +G +
Sbjct: 807 ---RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 863
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
R T++ LI A EI+ A ++++ M L + + ++ L R E+ L
Sbjct: 864 RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC-DAMVSVLNRNHRFQESRMVL 922
Query: 374 VELVDGGNVPREYTYRLVCDKLCLAGE 400
E+ G P Y + + LC G+
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGD 949
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 13/231 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ L + G +EA M P+ +++ LI G +A + ++M
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G P FTY L+ C+ G L EA + + + D V Y
Sbjct: 610 TKVGH--HPTFFTYGSLLKGLCKGG-----------HLREAEKFLKSLHAVPAAVDTVMY 656
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N L+ CK+ + +A+ LF +M ++ P+ TY SLI + A+ ++ +
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ +P+ YT + + +AG+ F ++ + G+ P T + D
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
+L FF W++ GF HD T M L RA + L E + T
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN------TV 400
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI G +EA F +M++ C+PD Y TLI + G A + ++M
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G PD FTY+++I+ + G L K LF M+ +G P++VTY
Sbjct: 461 QAGGL--SPDTFTYSVIINCLGKAGHLPAAHK-----------LFCEMVDQGCTPNLVTY 507
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N ++D K Q AL+L+ DM+ G P++VTY ++ ++ A V +MQ+
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG---NVP 383
N IP Y ++ +AG V +AW + ++ G NVP
Sbjct: 568 KNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
++ R D N ++ + GN + L++ PGF D TYT ++ + R
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQ--PGF--KHDGHTYTTMVGNLGR- 376
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
++ +L M+ G P+ VTYN LI + + A+ +F M+
Sbjct: 377 ----------AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGR 365
+ GC P+RVTY +LI ++ +D A+++ + MQ G+ P + +Y+ II+ L +AG
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA--GGLSPDTFTYSVIINCLGKAGH 484
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ A E+VD G P TY ++ D
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 264 GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
G + L GF D TY ++ + + +L ++M + GC PN VTY+ LI
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408
Query: 324 YSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
Y N ++ A+ V MQ P +Y +I +AG + A + GG P
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCK-PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 384 REYTYRLVCDKLCLAG 399
+TY ++ + L AG
Sbjct: 468 DTFTYSVIINCLGKAG 483
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
+L FF W++ GF HD T M L RA + L E + T
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN------TV 400
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI G +EA F +M++ C+PD Y TLI + G A + ++M
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G PD FTY+++I+ + G L K LF M+ +G P++VTY
Sbjct: 461 QAGGL--SPDTFTYSVIINCLGKAGHLPAAHK-----------LFCEMVDQGCTPNLVTY 507
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N ++D K Q AL+L+ DM+ G P++VTY ++ ++ A V +MQ+
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG---NVP 383
N IP Y ++ +AG V +AW + ++ G NVP
Sbjct: 568 KNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
++ R D N ++ + GN + L++ PGF D TYT ++ + R
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQ--PGF--KHDGHTYTTMVGNLGR- 376
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
++ +L M+ G P+ VTYN LI + + A+ +F M+
Sbjct: 377 ----------AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGR 365
+ GC P+RVTY +LI ++ +D A+++ + MQ G+ P + +Y+ II+ L +AG
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA--GGLSPDTFTYSVIINCLGKAGH 484
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ A E+VD G P TY ++ D
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 264 GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
G + L GF D TY ++ + + +L ++M + GC PN VTY+ LI
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408
Query: 324 YSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
Y N ++ A+ V MQ P +Y +I +AG + A + GG P
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCK-PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 384 REYTYRLVCDKLCLAG 399
+TY ++ + L AG
Sbjct: 468 DTFTYSVIINCLGKAG 483
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
+L FF W++ GF HD T M L RA + L E + T
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN------TV 400
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI G +EA F +M++ C+PD Y TLI + G A + ++M
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 460
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G PD FTY+++I+ + G L K LF M+ +G P++VTY
Sbjct: 461 QAGGL--SPDTFTYSVIINCLGKAGHLPAAHK-----------LFCEMVDQGCTPNLVTY 507
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N ++D K Q AL+L+ DM+ G P++VTY ++ ++ A V +MQ+
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG---NVP 383
N IP Y ++ +AG V +AW + ++ G NVP
Sbjct: 568 KNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
++ R D N ++ + GN + L++ PGF D TYT ++ + R
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQ--PGF--KHDGHTYTTMVGNLGR- 376
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
++ +L M+ G P+ VTYN LI + + A+ +F M+
Sbjct: 377 ----------AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGR 365
+ GC P+RVTY +LI ++ +D A+++ + MQ G+ P + +Y+ II+ L +AG
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA--GGLSPDTFTYSVIINCLGKAGH 484
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ A E+VD G P TY ++ D
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 264 GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
G + L GF D TY ++ + + +L ++M + GC PN VTY+ LI
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHS 408
Query: 324 YSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
Y N ++ A+ V MQ P +Y +I +AG + A + GG P
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCK-PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 384 REYTYRLVCDKLCLAG 399
+TY ++ + L AG
Sbjct: 468 DTFTYSVIINCLGKAG 483
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 24/289 (8%)
Query: 101 RKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
+ + FF W GF HD T M +L + +T+ L+E K +T
Sbjct: 175 KPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK-------GLLT 227
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T +K +A F MK+Y + + N L+ +L R A+ L +
Sbjct: 228 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 287
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+++ P+ TYT+L++ +CR R L EA R++ M+ G PD+V
Sbjct: 288 KLKER---FTPNMMTYTVLLNGWCR-----------VRNLIEAARIWNDMIDHGLKPDIV 333
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
+N +++G ++ + A++LF MK KG PN +Y +IR + + ++ A+E DM
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 341 QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
++ G+ P ++ YT +I ++ + L E+ + G+ P TY
Sbjct: 394 --VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 440
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T L+ L G +A M + +PD+ +N LI A + G F A+ L +M
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
P+ FTYT LI+ +C G + EA ++F LM KG PDVV Y +
Sbjct: 276 MSI--APNIFTYTSLINGFCMEGCVD-----------EARQMFYLMETKGCFPDVVAYTS 322
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
LI+G CK ++ A+++F +M +KG N +TY +LI+ + + + A EV M ++
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM--VS 380
Query: 345 HGIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVD---GGNVPREYTYRLVCDKLCLAGE 400
G+P + +Y ++H LC G+V +A ++ G P +TY ++ LC G+
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 14/227 (6%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T T LI EA +M + +PD+ Y T+I +LC+ G+ A L +Q
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
ME G PD YT L++ C G R +A L R M + PDV+T
Sbjct: 203 MENYGI--RPDVVMYTSLVNGLCNSG-----------RWRDADSLLRGMTKRKIKPDVIT 249
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+NALID K + A EL+ +M + APN TY SLI + +D A ++ M+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
P +YT +I+ C+ +V +A E+ G TY
Sbjct: 310 T-KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 17/229 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T LI +G EA FY M+ C PD+ AY +LI C+ A + +M
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G + TYT LI + + G + A +F M+ +G P++ TY
Sbjct: 344 SQKGL--TGNTITYTTLIQGFGQVG-----------KPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 283 NALIDGCCKTYRIQRALELFEDMKKK---GCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
N L+ C ++++AL +FEDM+K+ G APN TY+ L+ ++++A+ V D
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
M++ I + T II +C+AG+V A + L G P TY
Sbjct: 451 MRKREMDIGIITY-TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
D+ N L+ C+ A L +M GF PD T+T LI+ +C
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF--EPDIVTFTSLINGFC---------- 153
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
R+ EA + M+ G PDVV Y +ID CK + AL LF+ M+ G P+
Sbjct: 154 -LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
V Y SL+ + A +LR M + P ++ +I A + G+ +A
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK-PDVITFNALIDAFVKEGKFLDAEELYN 271
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAG 399
E++ P +TY + + C+ G
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEG 296
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T T LI+ G+ G + A F M P+IR YN L++ LC G +A +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 220 EQM---ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
E M E+ G P+ +TY +L+ C +G +L +A +F M +
Sbjct: 411 EDMQKREMDG--VAPNIWTYNVLLHGLCYNG-----------KLEKALMVFEDMRKREMD 457
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
++TY +I G CK +++ A+ LF + KG PN VTY ++I
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G D+ T N L++ C++ + A M K G P+ VT+ SLI + N ++ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 334 VEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
+ ++ M + GI P YT II +LC+ G V A S ++ + G P Y +
Sbjct: 162 MSMVNQMVEM--GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 393 DKLCLAGE----DGLLGDEVHERIK 413
+ LC +G D LL +IK
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIK 244
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 144/341 (42%), Gaps = 52/341 (15%)
Query: 91 RDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKH 150
R +D+ + ++FF+W F HD T L+R L+G + T +
Sbjct: 97 RSILEIDVEINVKIQFFKWAGKRRNFQHDCST----YMTLIRCLEEARLYGEMYRTIQEV 152
Query: 151 HNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
N + ++ A ++ L+K LG + S+A FY+ K C+P YN++I L + G
Sbjct: 153 VRNTYVS-VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEG 211
Query: 211 NFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM 270
+ + +M G C PD TY+ LISSY + G R A RLF M
Sbjct: 212 QHEKVHEVYTEMCNEGD-CFPDTITYSALISSYEKLG-----------RNDSAIRLFDEM 259
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
P Y L+ K ++++AL+LFE+MK+ GC+P TY LI+ +
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 331 DRAVEVLRDMQR---------LNHGI-------------------------PSSSSYTPI 356
D A +DM R LN+ + P+ SY +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 357 IHALCEA-GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
I AL E+ V+E S+ ++ P E+TY ++ D C
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 117/278 (42%), Gaps = 15/278 (5%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T T LIK LG+ G EA + M + PD+ N L+ L +VG +
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 220 EQMELPGFW-CPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
+M G W C P +Y +I + ++ + E F M P
Sbjct: 362 SEM---GMWRCTPTVVSYNTVIKALFE----------SKAHVSEVSSWFDKMKADSVSPS 408
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
TY+ LIDG CKT R+++AL L E+M +KG P Y SLI + A E+ +
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+++ N G SS Y +I + G+++EA E+ + G+ P Y Y + + A
Sbjct: 469 ELKE-NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 399 GEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYP 436
G + + +NG R ++ R G P
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP 565
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 117/306 (38%), Gaps = 34/306 (11%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G T D V + +L + + L E R P + T + L +
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM-----WRCTPTVVSYNTVIKALFESK 387
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
SE S F +MK P Y+ LI C+ +A LLE+M+ GF PP
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF--PPCPA 445
Query: 235 TYTILISSYCRHGILTGCRKATRR------------------------RLYEAGRLFRLM 270
Y LI++ + + + +L EA LF M
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
+G PDV YNAL+ G K I A L M++ GC + +++ ++ ++ T
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP 565
Query: 331 DRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
RA+E+ ++ + GI P +Y ++ AG EA + E+ D G TY
Sbjct: 566 RRAIEMFETIK--HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Query: 390 LVCDKL 395
+ D +
Sbjct: 624 SILDAV 629
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKG-CAPNRVTYDSLIRYYSATNEIDRAVE 335
P TYN++I + + ++ E++ +M +G C P+ +TY +LI Y D A+
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 336 VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+ +M+ N P+ YT ++ + G+V +A E+ G P YTY + L
Sbjct: 255 LFDEMKD-NCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 396 CLAG 399
AG
Sbjct: 314 GKAG 317
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
M++ PD+ +YNT+I C +A L +M+ G C T+ ILI ++C+
Sbjct: 167 EMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG--CSWSLVTWGILIDAFCK 224
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G ++ EA + M F G D+V Y +LI G C + R LF+++
Sbjct: 225 AG-----------KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAG 364
++G +P +TY++LIR + ++ A E+ M + G+ P+ +YT +I LC G
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM--IERGVRPNVYTYTGLIDGLCGVG 331
Query: 365 RVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKR 419
+ EA L +++ P TY ++ +KLC +DGL+ D V I M+KR
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLC---KDGLVADAVE--IVELMKKR 381
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
R + T LI+ + G EAS F M + RP++ Y LI LC VG
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKAT----RRR---------- 259
A LL M P+A TY I+I+ C+ G++ + +RR
Sbjct: 335 EALQLLNLMIEKDE--EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 260 ----------LYEAGRLFRLMLFKGFV--PDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
L EA +L LML PDV++YNALI G CK R+ +AL++++ + +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
K A +RVT + L+ ++++A+E+ + + + + +S +YT +I C+ G +
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD-SKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
A L ++ P + Y + LC G
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 145 ETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIY 204
E AN+ + + + T I LI + G EA MK D+ Y +LI
Sbjct: 198 ELANEMKGSGCSWSLVTWGI--LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 205 ALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAG 264
C G R K L +++ G P A TY LI +C+ G +L EA
Sbjct: 256 GFCDCGELDRGKALFDEVLERGD--SPCAITYNTLIRGFCKLG-----------QLKEAS 302
Query: 265 RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYY 324
+F M+ +G P+V TY LIDG C + + AL+L M +K PN VTY+ +I
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 325 SATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
+ AVE++ M++ P + +Y ++ LC G + EA L
Sbjct: 363 CKDGLVADAVEIVELMKK-RRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 12/247 (4%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
++ T +I L + GL ++A MK+ RPD YN L+ LC G+
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
A LL M + PD +Y LI C+ RL++A ++ L++ K
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKE-----------NRLHQALDIYDLLVEK 453
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
D VT N L++ K + +A+EL++ + N TY ++I + T ++ A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+L M R++ PS Y ++ +LC+ G + +AW E+ N P ++ ++ D
Sbjct: 514 KGLLCKM-RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 394 KLCLAGE 400
AG+
Sbjct: 573 GSLKAGD 579
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 24/286 (8%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L K+LE ++ SG + VT + +A GFLKE
Sbjct: 193 LEKALELANEMKG-SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM------KFMGLEA 245
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T LI+ + G F + + P YNTLI C++G A +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E M G P+ +TYT LI C G + EA +L LM+ K P+
Sbjct: 306 EFMIERGV--RPNVYTYTGLIDGLCGVG-----------KTKEALQLLNLMIEKDEEPNA 352
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
VTYN +I+ CK + A+E+ E MKK+ P+ +TY+ L+ A ++D A ++L
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 340 MQR-LNHGIPSSSSYTPIIHALCEAGRVAEA---WSFLVELVDGGN 381
M + ++ P SY +IH LC+ R+ +A + LVE + G+
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
++ +N L+ LCR +A LL +M PD F+Y +I +C
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM--PDVFSYNTVIRGFCEG-------- 190
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
+ L +A L M G +VT+ LID CK ++ A+ ++MK G +
Sbjct: 191 ---KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADL 247
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
V Y SLIR + E+DR + ++ P + +Y +I C+ G++ EA
Sbjct: 248 VVYTSLIRGFCDCGELDRGKALFDEVLERGDS-PCAITYNTLIRGFCKLGQLKEASEIFE 306
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAGE 400
+++ G P YTY + D LC G+
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGK 332
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 16/199 (8%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR 258
Y +I C+ G AK LL +M + P F Y L+SS C+ G L
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSEL--QPSVFDYNCLLSSLCKEGSLD-------- 546
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
+A RLF M PDVV++N +IDG K I+ A L M + G +P+ TY
Sbjct: 547 ---QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYS 603
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
LI + +D A+ M ++ G P + ++ G + + +LV
Sbjct: 604 KLINRFLKLGYLDEAISFFDKM--VDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 378 DGGNVPREYTYRLVCDKLC 396
D V + V D +C
Sbjct: 662 DKDIVLDKELTCTVMDYMC 680
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
Query: 249 LTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
L C R+ + G L LML +GF +V +N L+ G C+ +A+ L +M++
Sbjct: 113 LLECYVQMRKTGFAFGVL-ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVA 367
P+ +Y+++IR + E+++A+E+ +M+ G S ++ +I A C+AG++
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMK--GSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE---DGLLGDEVHER 411
EA FL E+ G Y + C GE L DEV ER
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 22/287 (7%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L +L+FFRW E HD T +M +L + L + K P
Sbjct: 130 LEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK------GVPW 183
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
LI+ G+ G+ E+ F +MK I++YN+L + R G + AK
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+M G P TY +++ + RL A R F M +G PD
Sbjct: 244 NKMVSEG--VEPTRHTYNLMLWGFF-----------LSLRLETALRFFEDMKTRGISPDD 290
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
T+N +I+G C+ ++ A +LF +MK P+ V+Y ++I+ Y A + +D + + +
Sbjct: 291 ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
M+ + GI P++++Y+ ++ LC+AG++ EA + L ++ P++
Sbjct: 351 MR--SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD 395
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 113/273 (41%), Gaps = 51/273 (18%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T + LI L G S+AS M + P++ +N LI A + G F A+ L
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ M PD FTY L++ +C H RL +A ++F M+ K PDV
Sbjct: 354 DDMIKRSI--DPDIFTYNSLVNGFCMH-----------DRLDKAKQMFEFMVSKDCFPDV 400
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
VTYN LI G CK+ R++ ELF +M +G + VTY +LI+ + D A +V +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK- 459
Query: 340 MQRLNHGIPSSSS------------------------------------YTPIIHALCEA 363
Q ++ G+P YT +I +C+A
Sbjct: 460 -QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
G+V + W L G P TY + LC
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 122/297 (41%), Gaps = 58/297 (19%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI L ASEA RM Q C+P++ Y ++ LC+ G+ A LL
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 221 QME-------------LPGFWCP--------------------PDAFTYTILISSYCRHG 247
+ME + C P+ TY+ LIS C +G
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 248 ILTGCRK------------------------ATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
+ + + EA +L+ M+ + PD+ TYN
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+L++G C R+ +A ++FE M K C P+ VTY++LI+ + + ++ E+ R+M
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ + +YT +I L G A ++V G P TY ++ D LC G+
Sbjct: 430 GL-VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
+HR T T T LI+ L G A F +M PDI Y+ L+ LC G
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
+A + + M+ D + YT +I C+ G ++ + LF +
Sbjct: 487 EKALEVFDYMQKSEI--KLDIYIYTTMIEGMCKAG-----------KVDDGWDLFCSLSL 533
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
KG P+VVTYN +I G C +Q A L + MK+ G PN TY++LIR + +
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 333 AVEVLRDMQ 341
+ E++R+M+
Sbjct: 594 SAELIREMR 602
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S+A +M + RPD + TLI+ L + A L+++M G C P+ TY
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYG 229
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++++ C+ G T L L M DVV +N +ID CK +
Sbjct: 230 VVVNGLCKRG-------DTDLAL----NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTP 355
AL LF++M+ KG PN VTY SLI + A ++L DM +++N P+ ++
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNA 335
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+I A + G+ EA +++ P +TY + + C+
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 18/231 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M++ + YN LI CR + A LL +M G+ P T + L++ YC
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY--EPSIVTLSSLLNGYC- 166
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG +R+ +A L M+ G+ PD +T+ LI G + A+ L + M
Sbjct: 167 HG----------KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
++GC PN VTY ++ + D A+ +L M+ + II +LC+
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRH 275
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE----DGLLGDEVHERI 412
V +A + E+ G P TY + LC G LL D + ++I
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M + P I ++L+ C + A L++QM G+ PD T+T LI
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY--RPDTITFTTLI----- 197
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG+ + EA L M+ +G P++VTY +++G CK AL L M
Sbjct: 198 HGLF------LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAG 364
+ + V ++++I +D A+ + ++M+ GI P+ +Y+ +I LC G
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME--TKGIRPNVVTYSSLISCLCSYG 309
Query: 365 RVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
R ++A L ++++ P T+ + D G+
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T ++ + GL +A F M++ C P++ Y LI+A + + A L E M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 223 ELPGFWCPPDAFTYTILISSYCRHG-ILTGC----RKATRRRLYEAGRLFRLMLFKGFVP 277
G C P+ TY+ LI +C+ G + C R + + + F+ P
Sbjct: 580 LSEG--CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
+VVTY AL+DG CK++R++ A +L + M +GC PN++ YD+LI ++D A EV
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 338 RDMQRLNHGIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+M HG P++ +Y+ +I + R A L ++++ P Y + D LC
Sbjct: 698 TEMSE--HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 397 LAGE 400
G+
Sbjct: 756 KVGK 759
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 43/241 (17%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD Y+ ++ LC A L E+M+ G D +TYTI++ S+C+ G++ R
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL--VADVYTYTIMVDSFCKAGLIEQAR 538
Query: 254 K------------------------ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGC 289
K +++ A LF ML +G +P++VTY+ALIDG
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 290 CKTYRIQRALELFEDM----------------KKKGCAPNRVTYDSLIRYYSATNEIDRA 333
CK ++++A ++FE M PN VTY +L+ + ++ ++ A
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
++L D + P+ Y +I LC+ G++ EA E+ + G YTY + D
Sbjct: 659 RKLL-DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 394 K 394
+
Sbjct: 718 R 718
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI L E L EA RM+ C P++ Y+TL+ R K +L
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M + G C P + L+ +YC G + A +L + M+ G +P V
Sbjct: 362 MMMMEG--CYPSPKIFNSLVHAYCTSGDHS-----------YAYKLLKKMVKCGHMPGYV 408
Query: 281 TYNALIDGCCKTYR------IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
YN LI C + A + + +M G N++ S R + + ++A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 335 EVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
V+R+M + G IP +S+Y+ +++ LC A ++ A+ E+ GG V YTY ++ D
Sbjct: 469 SVIREM--IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 394 KLCLAG 399
C AG
Sbjct: 527 SFCKAG 532
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 23/293 (7%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTAT 163
+ FF W G+ H + ++VR + K FL++ + + +
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDD------DKEVFGEF 202
Query: 164 ITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME 223
+ L++ G S A R+K + RP YN LI A + A + +M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 224 LPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
L D FT S C+ G + EA L+ + FVPD V Y
Sbjct: 263 LANL--RMDGFTLRCFAYSLCKVG-----------KWREA---LTLVETENFVPDTVFYT 306
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
LI G C+ + A++ M+ C PN VTY +L+ ++ R VL +M +
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL-NMMMM 365
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
PS + ++HA C +G + A+ L ++V G++P Y ++ +C
Sbjct: 366 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 110/280 (39%), Gaps = 48/280 (17%)
Query: 149 KHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCR 208
K ++++ P T L+ + EA M C P+ Y+ LI LC+
Sbjct: 628 KQYDDNSERP-NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 209 VGNFARAKFLLEQMELPGF---------------------------------WCPPDAFT 235
VG A+ + +M GF C P+
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 236 YTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRI 295
YT +I C+ G + EA +L ++M KG P+VVTY A+IDG +I
Sbjct: 747 YTEMIDGLCKVG-----------KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
+ LEL E M KG APN VTY LI + +D A +L +M++ H ++ Y
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ-THWPTHTAGYRK 854
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+I + E+ L E+ P YRL+ D L
Sbjct: 855 VIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 206 LCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGR 265
LC G + +A ++ +M GF PD TY+ +++ C A++ L A
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFI--PDTSTYSKVLNYLC---------NASKMEL--AFL 504
Query: 266 LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
LF M G V DV TY ++D CK I++A + F +M++ GC PN VTY +LI Y
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 326 ATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
++ A E+ M L+ G +P+ +Y+ +I C+AG+V +A + +VP
Sbjct: 565 KAKKVSYANELFETM--LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 103/265 (38%), Gaps = 47/265 (17%)
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
P T T + LI + AS +M + C P++ Y +I LC+VG A
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
L++ ME G C P+ TYT +I + G + C + R M KG P
Sbjct: 766 LMQMMEEKG--CQPNVVTYTAMIDGFGMIGKIETCLELLER-----------MGSKGVAP 812
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKK------------------------------ 307
+ VTY LID CCK + A L E+MK+
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDE 872
Query: 308 ---KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEA 363
AP Y LI ++ A+ +L ++ + + SS+Y +I +LC A
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 932
Query: 364 GRVAEAWSFLVELVDGGNVPREYTY 388
+V A+ E+ G +P ++
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSF 957
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M ++ P++ YN LI+ C+ GN A LL +ME PD FTYTILI+
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME--SLNLSPDVFTYTILINGL 384
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C ++ EA RLF+ M + P TYN+LI G CK Y +++AL+L
Sbjct: 385 C-----------IEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
+M G PN +T+ +LI Y +I A+ + +M + +P +YT +I A +
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT-IKGIVPDVVTYTALIDAHFKE 492
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ EA ++++ G P ++T+ + D
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 14/224 (6%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
+QGL S+ M +P++ Y I LCR A+ + E M+ G P+
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVL--PN 268
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
+TY+ +I YC+ G + +A L++ +L +P+VV + L+DG CK
Sbjct: 269 LYTYSAMIDGYCKTG-----------NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
+ A LF M K G PN Y+ LI + + + AV +L +M+ LN P +
Sbjct: 318 RELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS-PDVFT 376
Query: 353 YTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
YT +I+ LC +VAEA ++ + P TY + C
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T LI L + +EA+ F +MK P YN+LI+ C+ N +A L +M
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G P+ T++ LI YC R + A L+ M KG VPDVVTY
Sbjct: 436 TASGV--EPNIITFSTLIDGYC-----------NVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
ALID K ++ AL L+ DM + G PN T+ L+ + + A++ ++ +
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ 542
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
+ +T +I LC+ G + A F ++ G P +Y
Sbjct: 543 -QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYV------------S 589
Query: 403 LLGDEVHERIKNGMRKRYKQTMMVKPVMTRKG 434
+L + E KR TMM++ M + G
Sbjct: 590 MLKGHLQE-------KRITDTMMLQCDMIKTG 614
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 19/223 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD+ Y L + G +++ + LL++M G P+ + YTI I CR
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGI--KPNVYIYTIYILDLCRDN------ 248
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
++ EA ++F LM G +P++ TY+A+IDG CKT +++A L++++ PN
Sbjct: 249 -----KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSF 372
V + +L+ + E+ A + M + G+ P+ Y +IH C++G + EA
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKF--GVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAGEDGLL-GDEVHERIKN 414
L E+ P +TY ++ + LC+ ED + + + +++KN
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCI--EDQVAEANRLFQKMKN 402
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 196 IRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKA 255
I ++ LI +G F A ++ +M+ C PD S C IL G +
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWVSREMK-----CSPD--------SKACL-SILNGLVR- 176
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
RRR ++LM+ +G VPDV Y L C K + +L ++M G PN
Sbjct: 177 -RRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLV 374
Y I N+++ A ++ M++ HG+ P+ +Y+ +I C+ G V +A+
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKK--HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAGE 400
E++ +P + + D C A E
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARE 319
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 153/369 (41%), Gaps = 62/369 (16%)
Query: 89 AYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETAN 148
AY + R +LG E F+ + G+ ++C+ + L++ N + + KE
Sbjct: 162 AYANNSRFELGF----EAFKR-SGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMI- 215
Query: 149 KHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCR 208
R T +I L + G ++A MK Y C P++ +YNTLI C+
Sbjct: 216 -----RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 209 VGN---FARAKFLLEQME--------------LPGFW-------------------CPPD 232
+G +A +L++M + GFW P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
+Y LI+ C G ++ EA + M+ G P+++TYNALI+G CK
Sbjct: 331 VISYNSLINGLCNGG-----------KISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSS 351
++ AL++F +K +G P Y+ LI Y +ID + +M+R GI P
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER--EGIVPDVG 437
Query: 352 SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHER 411
+Y +I LC G + A +L G +P T+ ++ + C GE + E
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Query: 412 IKNGMRKRY 420
K G++ R+
Sbjct: 497 SKMGLKPRH 505
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI + + EA F +K P R YN LI A C++G L E+M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
E G PD TY LI+ CR+G + +K LF + KG +PD+VT+
Sbjct: 428 EREGIV--PDVGTYNCLIAGLCRNGNIEAAKK-----------LFDQLTSKG-LPDLVTF 473
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ L++G C+ ++A L ++M K G P +TY+ +++ Y + A + M++
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ +SY ++ + G++ +A L E+++ G VP TY +V +++ G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
++G E F M+ PD+ +++++ R GN +A ++ G PD
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI--PD 409
Query: 233 AFTYTILISSYCRHGILT------------GCRKAT------------RRRLYEAGRLFR 268
YTILI YCR G+++ GC R+ L EA +LF
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 269 LMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATN 328
M + PD T LIDG CK +Q A+ELF+ MK+K + VTY++L+ +
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 329 EIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+ID A E+ DM +P+ SY+ +++ALC G +AEA+ E++
Sbjct: 530 DIDTAKEIWADMVS-KEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 134/315 (42%), Gaps = 24/315 (7%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
LR++ E F + + GFT C + LVR + WG +E + I
Sbjct: 181 LREAHEAFTLLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVYQEIS------RSGVGI 233
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T+ ++ L + G + ++++ PDI YNTLI A G A L+
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
M PG P +TY +I+ C+HG + A +F ML G PD
Sbjct: 294 NAM--PGKGFSPGVYTYNTVINGLCKHG-----------KYERAKEVFAEMLRSGLSPDS 340
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TY +L+ CK + ++F DM+ + P+ V + S++ ++ + +D+A+
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC--- 396
++ IP + YT +I C G ++ A + E++ G TY + LC
Sbjct: 401 VKEAGL-IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 397 LAGEDGLLGDEVHER 411
+ GE L +E+ ER
Sbjct: 460 MLGEADKLFNEMTER 474
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
++ N ++ ALC+ G + L Q++ G + PD TY LIS+Y G++
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY--PDIVTYNTLISAYSSKGLME---- 287
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
EA L M KGF P V TYN +I+G CK + +RA E+F +M + G +P+
Sbjct: 288 -------EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
TY SL+ ++ +V DM R +P ++ ++ +G + +A +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
+ + G +P Y ++ C G + + +E ++ G
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 137/347 (39%), Gaps = 35/347 (10%)
Query: 63 RTPLRQRNLNDEHRKLHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVE---------AH 113
RT ++ R L R+ H+ LL + L SL WVE +
Sbjct: 173 RTYVQARKL----REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 114 SGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGE 173
SG + T M L + + + FL + K T LI
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD------IVTYNTLISAYSS 282
Query: 174 QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDA 233
+GL EA M P + YNT+I LC+ G + RAK + +M G PD+
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL--SPDS 340
Query: 234 FTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTY 293
TY L+ C+ G + E ++F M + VPD+V +++++ ++
Sbjct: 341 TTYRSLLMEACKKG-----------DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 294 RIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSS 352
+ +AL F +K+ G P+ V Y LI+ Y I A+ + +M L G +
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM--LQQGCAMDVVT 447
Query: 353 YTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
Y I+H LC+ + EA E+ + P YT ++ D C G
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T+T LI + G A F +MK+ R D+ YNTL+ +VG+ AK + M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
P +Y+IL+++ C G L EA R++ M+ K P V+
Sbjct: 542 VSKEIL--PTPISYSILVNALCSKG-----------HLAEAFRVWDEMISKNIKPTVMIC 588
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N++I G C++ E M +G P+ ++Y++LI + + +A +++ M+
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 343 LNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
G +P +Y I+H C ++ EA L ++++ G P TY
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T + + L+ L +G +EA + M + +P + N++I CR GN + + L
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E+M GF PD +Y LI + R ++ ++ E G G VPDV
Sbjct: 609 EKMISEGF--VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG---------GLVPDV 657
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TYN+++ G C+ +++ A + M ++G P+R TY +I + + + + A + +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 340 M 340
M
Sbjct: 718 M 718
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 155 RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR 214
+N T +IK G AS+ +M PD +YNTLIY R N ++
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
A L+++ME PD FTY ++ +CR + ++ EA + R M+ +G
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCR-----------QNQMKEAEVVLRKMIERG 687
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
PD TY +I+G + A + ++M ++G +P+
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 229 CPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP----------- 277
C + + +LI +Y + R+L EA F L+ KGF
Sbjct: 161 CGSNDSVFDLLIRTYVQA-----------RKLREAHEAFTLLRSKGFTVSIDACNALIGS 209
Query: 278 ------------------------DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
+V T N +++ CK ++++ +++KG P+
Sbjct: 210 LVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD 269
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
VTY++LI YS+ ++ A E++ M P +Y +I+ LC+ G+ A
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS-PGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 374 VELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVH-ERIKNGMRKR 419
E++ G P TYR + + C GD V E++ + MR R
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKK------GDVVETEKVFSDMRSR 369
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 156/395 (39%), Gaps = 59/395 (14%)
Query: 57 QNGFRHRTPLRQRNLNDEHRKLHDGLL-LLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSG 115
++GF ++ L + N+ + + L+ +L +Y + R + + FF W
Sbjct: 88 ESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARC---AKLAYRFFLWSGEQEC 144
Query: 116 FTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQG 175
F H + + + K +W + E P T T LI GE G
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGF------PTTARTFNLLICSCGEAG 198
Query: 176 LASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFT 235
LA +A + F + K ++ RP +YN ++ +L V + +++ +QM GF PD T
Sbjct: 199 LAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF--SPDVLT 256
Query: 236 YTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN------------ 283
Y IL+ + R G ++ RLF M GF PD TYN
Sbjct: 257 YNILLWTNYRLG-----------KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKP 305
Query: 284 -----------------------ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
LIDG + ++ ++M K GC P+ V Y +
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
I Y + E+D+A E+ R+M + +P+ +Y +I LC AG EA L E+ G
Sbjct: 366 ITGYVVSGELDKAKEMFREMT-VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 381 NVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
P Y + L AG+ + E +K G
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ +LG+ A T MK+ P + Y TLI L R GN K+ L++M
Sbjct: 291 TYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEM 350
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G C PD YT++I+ Y G L +A +FR M KG +P+V TY
Sbjct: 351 VKAG--CRPDVVCYTVMITGYVVSG-----------ELDKAKEMFREMTVKGQLPNVFTY 397
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N++I G C + A L ++M+ +GC PN V Y +L+ Y ++ A +V+R+M +
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Query: 343 LNH 345
H
Sbjct: 458 KGH 460
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 149/370 (40%), Gaps = 58/370 (15%)
Query: 105 EFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATI 164
E F + F H R +L+ + + + KH ++ P+T
Sbjct: 69 EIFDYASQQPNFRHS----RSSHLILILKLGRGRYFNLIDDVLAKHRSS--GYPLTGEIF 122
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYH--------------------------------- 191
T LIK+ E L + TFY+M +++
Sbjct: 123 TYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSR 182
Query: 192 ---CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGI 248
P+ R+YN L+ A C + + A L +M PD +Y ILI +CR G
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV--PDVDSYKILIQGFCRKGQ 240
Query: 249 LTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
+ G A L ML KGFVPD ++Y L++ C+ +++ A +L MK K
Sbjct: 241 VNG-----------AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK 289
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVA 367
GC P+ V Y+++I + + A +VL DM L++G P+S SY +I LC+ G
Sbjct: 290 GCNPDLVHYNTMILGFCREDRAMDARKVLDDM--LSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMMVK 427
E +L E++ G P + C G+ D V +KNG MV
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Query: 428 PVMTRKGYPE 437
P++ + E
Sbjct: 408 PLICNEDESE 417
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 106/239 (44%), Gaps = 20/239 (8%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F +M + PD+ +Y LI CR G A LL+ M GF PD +YT L++S
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV--PDRLSYTTLLNSL 270
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
CR + +L EA +L M KG PD+V YN +I G C+ R A ++ +
Sbjct: 271 CR-----------KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLD 319
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCE 362
DM GC+PN V+Y +LI D + L +M ++ G P S ++ C
Sbjct: 320 DMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM--ISKGFSPHFSVSNCLVKGFCS 377
Query: 363 AGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG----LLGDEVHERIKNGMR 417
G+V EA + ++ G T+ +V +C E L D V E I R
Sbjct: 378 FGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTR 436
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LI ++G EA + M + P++ YN+LI C G AK++ + M
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G C PD TY LI+ +C+ +R+ + +LF M ++G V D TYN
Sbjct: 318 KG--CFPDVVTYNTLITGFCKS-----------KRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
LI G C+ ++ A ++F M G +P+ VTY+ L+ +I++A+ ++ D+Q+
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ +Y II LC ++ EAW L G P Y + LC G
Sbjct: 425 MDV-DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 18/220 (8%)
Query: 183 TFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISS 242
FY M++ R D YNTLI L G + A LL M P+ +T LI +
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI--DPNVIFFTALIDT 263
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
+ + G L EA L++ M+ + VP+V TYN+LI+G C + A +F
Sbjct: 264 FVKEG-----------NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTPIIHAL 360
+ M KGC P+ VTY++LI + + ++ +++ +M Q L + + +Y +IH
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL---VGDAFTYNTLIHGY 369
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
C+AG++ A +VD G P TY ++ D LC G+
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 16/236 (6%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T LI L G ++A+ M + P++ + LI + GN A+ L ++
Sbjct: 220 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 279
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M P+ FTY LI+ +C HG L +A +F LM+ KG PDVVT
Sbjct: 280 MIRRSV--VPNVFTYNSLINGFCIHGCLG-----------DAKYMFDLMVSKGCFPDVVT 326
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YN LI G CK+ R++ ++LF +M +G + TY++LI Y +++ A +V M
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM- 385
Query: 342 RLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
++ G+ P +Y ++ LC G++ +A + +L TY ++ LC
Sbjct: 386 -VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 16/227 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI G +A F M C PD+ YNTLI C+ L +M
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G DAFTY LI YC+ G +L A ++F M+ G PD+VTY
Sbjct: 351 TYQGL--VGDAFTYNTLIHGYCQAG-----------KLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N L+D C +I++AL + ED++K + +TY+ +I+ T+++ A + R + R
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
G+ P + +Y +I LC G EA + + G +P E Y
Sbjct: 458 --KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
+++M+ D+ ++ LI+ CR + A LL +M GF P T L++ +
Sbjct: 102 YHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF--RPSIVTLGSLLNGF 159
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C+ R EA L M GFVP+VV YN +I+G CK + ALE+F
Sbjct: 160 CQGN-----------RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M+KKG + VTY++LI S + A +LRDM + P+ +T +I +
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID-PNVIFFTALIDTFVKE 267
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGD 406
G + EA + E++ VP +TY + + C+ G LGD
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI---HGCLGD 307
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI + G + A F RM PDI YN L+ LC G +A ++E +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ D TY I+I CR +L EA LFR + KG PD + Y
Sbjct: 421 QKSEM--DVDIITYNIIIQGLCRTD-----------KLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR--YYSATNEIDRA 333
+I G C+ + A +L MK+ G P+ YD +R Y S + E+ +A
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKA 520
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 24/289 (8%)
Query: 101 RKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
+ + FF W GF H T M +L + +T+ L+E K +T
Sbjct: 176 KPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTK-------GLLT 228
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T +K +A F MK+Y + + N L+ +L R A+ L +
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+++ P+ TYT+L++ +CR R L EA R++ M+ G PD+V
Sbjct: 289 KLKER---FTPNMMTYTVLLNGWCR-----------VRNLIEAARIWNDMIDHGLKPDIV 334
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
+N +++G ++ + A++LF MK KG PN +Y +IR + + ++ A+E DM
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 341 QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
++ G+ P ++ YT +I ++ + L E+ + G+ P TY
Sbjct: 395 --VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 117/230 (50%), Gaps = 15/230 (6%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI LL + +EA + RM RP ++ Y++L+ L + + LL++ME G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
P+ +T+TI I R G ++ EA + + M +G PDVVTY LI
Sbjct: 254 L--KPNVYTFTICIRVLGRAG-----------KINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
D C ++ A E+FE MK P+RVTY +L+ +S ++D + +M++ H
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH- 359
Query: 347 IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR-LVCDKL 395
+P ++T ++ ALC+AG EA+ L + D G +P +TY L+C L
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 171 LGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP 230
L + G EA FY +K PD YN ++ +VG A LL +M G C
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG--CE 535
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD LI++ + R+ EA ++F M P VVTYN L+ G
Sbjct: 536 PDVIVVNSLINTLYKA-----------DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS 350
K +IQ A+ELFE M +KGC PN +T+++L +E+ A+++L M + +P
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC-VPDV 643
Query: 351 SSYTPIIHALCEAGRVAEAWSFL 373
+Y II L + G+V EA F
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFF 666
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 17/239 (7%)
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
+ R+ T T LI L + G EA F M Y CRP+ YN LI + G
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
A L ++M G PD TY++L+ C G R+ E F+ +
Sbjct: 943 DAACALFKRMVKEGVR--PDLKTYSVLVDCLCMVG-----------RVDEGLHYFKELKE 989
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK-KKGCAPNRVTYDSLIRYYSATNEID 331
G PDVV YN +I+G K++R++ AL LF +MK +G P+ TY+SLI ++
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 332 RAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
A ++ ++QR G+ P+ ++ +I +G+ A++ +V GG P TY
Sbjct: 1050 EAGKIYNEIQR--AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T L+ L + G EA T M+ P++ YNTLI L RV A L
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
ME G P A+TY + I Y + G A F M KG P++V
Sbjct: 423 NMESLGV--KPTAYTYIVFIDYYGKSG-----------DSVSALETFEKMKTKGIAPNIV 469
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
NA + K R + A ++F +K G P+ VTY+ +++ YS EID A+++L +M
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
N P +I+ L +A RV EAW + + + P TY
Sbjct: 530 ME-NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 113/289 (39%), Gaps = 51/289 (17%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T I++LG G +EA RM C PD+ Y LI ALC AK + E+M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ PD TY L+ R + R L + + M G VPDVVT+
Sbjct: 320 KTGRH--KPDRVTYITLLD-----------RFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 283 NALIDGCCK-----------------------------------TYRIQRALELFEDMKK 307
L+D CK +R+ ALELF +M+
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRV 366
G P TY I YY + + A+E M+ GI P+ + +++L +AGR
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK--TKGIAPNIVACNASLYSLAKAGRD 484
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
EA L D G VP TY ++ GE + E ++NG
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T +I L + G +A +Y M P Y LI L + G AK L
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E M + C P+ Y ILI+ + + G A LF+ M+ +G PD+
Sbjct: 915 EGM--LDYGCRPNCAIYNILINGFGKAG-----------EADAACALFKRMVKEGVRPDL 961
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TY+ L+D C R+ L F+++K+ G P+ V Y+ +I ++ ++ A+ + +
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M+ P +Y +I L AG V EA E+ G P +T+ + L+G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 400 E 400
+
Sbjct: 1082 K 1082
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 23/256 (8%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA-KFLL 219
AT L+ G+ G E + M + C + +N +I L + GN A
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ M F P A TY LI + G RLYEA +LF ML G P+
Sbjct: 880 DLMSDRDF--SPTACTYGPLIDGLSKSG-----------RLYEAKQLFEGMLDYGCRPNC 926
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
YN LI+G K A LF+ M K+G P+ TY L+ +D + ++
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 340 MQR--LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL-VDGGNVPREYTYRLVCDKLC 396
++ LN P Y II+ L ++ R+ EA E+ G P YTY + L
Sbjct: 987 LKESGLN---PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 397 LAG---EDGLLGDEVH 409
+AG E G + +E+
Sbjct: 1044 IAGMVEEAGKIYNEIQ 1059
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 20/288 (6%)
Query: 134 NATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCR 193
+A K + FL A++ N + I + +L E G+ + S + + CR
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGS--------ILAEAGIDNAVSFSERLVANGICR 746
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
+I C+ N + A+ L E+ P TY +LI G
Sbjct: 747 DGDSILVPIIRYSCKHNNVSGARTLFEKFT-KDLGVQPKLPTYNLLIG---------GLL 796
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
+A + A +F + G +PDV TYN L+D K+ +I EL+++M C N
Sbjct: 797 EADMIEI--AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
+T++ +I +D A+++ D+ P++ +Y P+I L ++GR+ EA
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 374 VELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYK 421
++D G P Y ++ + AGE +K G+R K
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
+ + L +A R M GFV + +YN LI K+ A+E++ M +G P+
Sbjct: 164 SVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSL 223
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
TY SL+ +ID + +L++M+ L P+ ++T I L AG++ EA+ L
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK-PNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRK 418
+ D G P TY ++ D LC A + EV E++K G K
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLD-CAKEVFEKMKTGRHK 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 100/242 (41%), Gaps = 24/242 (9%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA-KFL 218
T T L+ LG+ G EA F M Q C P+ +NTL LC+ A K L
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
+ M++ C PD FTY +I ++G ++ EA F M K PD
Sbjct: 632 FKMMDM---GCVPDVFTYNTIIFGLVKNG-----------QVKEAMCFFHQMK-KLVYPD 676
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCA--PNRVTYDSLIRYYSATNEIDRAVEV 336
VT L+ G K I+ A ++ + CA P + ++ LI A ID AV
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYN-CADQPANLFWEDLIGSILAEAGIDNAVSF 735
Query: 337 LRDMQRLNHGI--PSSSSYTPIIHALCEAGRVAEAWSFLVELV-DGGNVPREYTYRLVCD 393
+ + +GI S PII C+ V+ A + + D G P+ TY L+
Sbjct: 736 SERL--VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 793
Query: 394 KL 395
L
Sbjct: 794 GL 795
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 27/184 (14%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
A LI G+ G A A F RM + RPD++ Y+ L+ LC VG ++
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 222 MELPGFWCPPDAFTYTILISSYCRHG------ILTGCRKATRR---RLY----------- 261
++ G PD Y ++I+ + +L K +R LY
Sbjct: 987 LKESGL--NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 262 -----EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
EAG+++ + G P+V T+NALI G + + + A +++ M G +PN T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 317 YDSL 320
Y+ L
Sbjct: 1105 YEQL 1108
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 15/243 (6%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T T LI + +QG EA + M Q P+ YN++I LC G AK
Sbjct: 243 NP-DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+ M G C P+ TY LIS +C+ R + E +LF+ M +GF
Sbjct: 302 KTFDLMASKG--CFPNVVTYNTLISGFCKF-----------RMVDEGMKLFQRMSCEGFN 348
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
D+ TYN LI G C+ +++ AL++F M + P+ +T+ L+ EI+ A+
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
DM+ I +Y +IH LC+A +V +AW L G P TY ++ LC
Sbjct: 409 FDDMRESEKYI-GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 397 LAG 399
G
Sbjct: 468 KNG 470
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+ Y D+ ++ LI+ CR + A +L +M G+ P T+ L+ +C
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY--EPSIVTFGSLLHGFC- 152
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
R+ +A L LM+ G+ P+VV YN LIDG CK + ALEL +M
Sbjct: 153 ----------LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
+KKG + VTY++L+ + A +LRDM + + P ++T +I + G
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN-PDVVTFTALIDVFVKQGN 261
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ EA E++ P TY + + LC+ G
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 18/236 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI L + G + A M++ D+ YNTL+ LC G ++ A +L M
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PD T+T LI + + G L EA L++ M+ P+ VTYN++I
Sbjct: 242 I--NPDVVTFTALIDVFVKQG-----------NLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLN 344
+G C R+ A + F+ M KGC PN VTY++LI + +D +++ + M + N
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
I +Y +IH C+ G++ A +V P T+ ++ LC+ GE
Sbjct: 349 ADI---FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 81/216 (37%), Gaps = 48/216 (22%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T +I L G +A TF M C P++ YNTLI C+ L ++
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M GF D FTY LI YC+ G +L A +F M+ + PD++T
Sbjct: 342 MSCEGF--NADIFTYNTLIHGYCQVG-----------KLRVALDIFCWMVSRRVTPDIIT 388
Query: 282 -----------------------------------YNALIDGCCKTYRIQRALELFEDMK 306
YN +I G CK ++++A ELF +
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+G P+ TY +I A E++R M+
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
R +A LF M+ +P +V + L+ R + + + M+ G + + ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
LI + + + A+ VL M +L + PS ++ ++H C R+ +A+S ++ +V
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYE-PSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 379 GGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGM 416
G P Y + D LC GE + + ++E K G+
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 16/237 (6%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I L E+G + A MK+ RPD+ YN+LI L G + + +L M G
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PD T++ LI Y + G +L EA + + M+ + P++VTYN+LI
Sbjct: 250 I--SPDVITFSALIDVYGKEG-----------QLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
+G C + A ++ + KG PN VTY++LI Y +D +++L M R G
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR--DG 354
Query: 347 IPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
+ + +Y + C+AG+ + A L +V G P YT+ ++ D LC G+ G
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG 411
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + LI + G++G EA + M Q P+I YN+LI LC G AK +L +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
GF+ P+A TY LI+ YC+ +R+ + ++ +M G D TY
Sbjct: 316 VSKGFF--PNAVTYNTLINGYCK-----------AKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N L G C+ + A ++ M G P+ T++ L+ +I +A+ L D+Q+
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ + +Y II LC+A +V +AW L G P TY
Sbjct: 423 -SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 179 EASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA ++ +R ++ D+ ++ TLI CR + A L +M GF P T+
Sbjct: 96 EAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF--EPSIVTFG 153
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
L++ +C R YEA L ++ G+ P+VV YN +ID C+ ++
Sbjct: 154 SLVNGFCH-----------VNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNT 202
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPI 356
AL++ + MKK G P+ VTY+SLI + + +L DM R+ GI P +++ +
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM--GISPDVITFSAL 260
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
I + G++ EA E++ P TY + + LC+ G
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
D YNTL C+ G F+ A+ +L +M G PD +T+ IL+ C HG + +
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV--HPDMYTFNILLDGLCDHGKIG--KA 413
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
R + + V ++TYN +I G CK +++ A LF + KG +P+
Sbjct: 414 LVRLEDLQKSKT---------VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP 348
+TY +++ A E+ R MQ+ + +P
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Query: 261 YEAG-RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
YEA LFR + G D+ ++ LID C+ R+ AL M K G P+ VT+ S
Sbjct: 95 YEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGS 154
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
L+ + N A+ ++ + L + P+ Y II +LCE G+V A L +
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYE-PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213
Query: 380 GNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGM 416
G P TY + +L +G G+ + + ++ G+
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
+P +V ++ L+ K + + + LF ++ G + + ++ +LI + + A+
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 336 VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
L M +L PS ++ +++ C R EA S + ++V G P Y + D L
Sbjct: 136 CLGKMMKLGFE-PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 396 CLAGEDGLLGDEVHERIKNGMR 417
C G+ D + K G+R
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIR 216
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 115/241 (47%), Gaps = 16/241 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+ + + LI L E G EA +M + C+P R Y LI ALC G +A L +
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD 325
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M G C P+ TYT+LI CR G ++ EA + R M+ P V+
Sbjct: 326 EMIPRG--CKPNVHTYTVLIDGLCRDG-----------KIEEANGVCRKMVKDRIFPSVI 372
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYNALI+G CK R+ A EL M+K+ C PN T++ L+ + +AV +L+ M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 341 QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
L++G+ P SY +I LC G + A+ L + P T+ + + C G
Sbjct: 433 --LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 400 E 400
+
Sbjct: 491 K 491
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 123/291 (42%), Gaps = 51/291 (17%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
RM PDI +YN LI LCR G+ A LL M F PD T+T +I+++C+
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC--FDIEPDCLTFTAIINAFCK 488
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE-- 303
G + A LML KG D VT LIDG CK + + AL + E
Sbjct: 489 QG-----------KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 304 ----------------DMKKKGC-----------------APNRVTYDSLIRYYSATNEI 330
DM KGC P+ VTY +L+ + +I
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 331 DRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRL 390
+ +L ++ +L+ +P+ YT II+ LC+ GRV EA L + D G P TY +
Sbjct: 598 TGSFRIL-ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 391 VCDKLCLAGEDGLLGDEVHERIKNG--MRKRYKQTMMVKPVMTRKGYPEIE 439
+ G+ + V ++ G + R +++ V+++KG E
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+T T T LIK L ++GL +A F M C+P++ Y LI LCR G A +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHG-------ILT-----GCRKATRR--------- 258
+M + P TY LI+ YC+ G +LT C+ R
Sbjct: 360 RKMVKDRIF--PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 259 ---RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
+ Y+A L + ML G PD+V+YN LIDG C+ + A +L M P+ +
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
T+ ++I + + D A L M R + + T +I +C+ G+ +A L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG-TTLIDGVCKVGKTRDALFILET 536
Query: 376 LV 377
LV
Sbjct: 537 LV 538
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 41/316 (12%)
Query: 106 FFRWVEAHSGFTHDEVTCREMACVLVRAN----ATKTLWGFLKETANKHHNNHR------ 155
FF WV HS + D ++ ++V + A + +KE + +
Sbjct: 89 FFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFD 148
Query: 156 ----------NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYA 205
N P ++ + L KL L A +T+ RM+ + Y T++ A
Sbjct: 149 ELREVFGFRLNYPCYSSLLMSLAKL----DLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204
Query: 206 LCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGR 265
LC+ G A+ + ++ GF D+ T L+ +CR L +A +
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFV--LDSHIGTSLLLGFCRG-----------LNLRDALK 251
Query: 266 LFRLMLFK-GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYY 324
+F +M + P+ V+Y+ LI G C+ R++ A L + M +KGC P+ TY LI+
Sbjct: 252 VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 325 SATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
ID+A + +M + G P+ +YT +I LC G++ EA ++V P
Sbjct: 312 CDRGLIDKAFNLFDEM--IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369
Query: 384 REYTYRLVCDKLCLAG 399
TY + + C G
Sbjct: 370 SVITYNALINGYCKDG 385
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 16/219 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T +I +QG A AS M + D TLI +C+VG A F+LE +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
P + + + S GC+ + L G++ +L G VP VVTY
Sbjct: 538 VKMRILTTPHSLNVILDMLS-------KGCK--VKEELAMLGKINKL----GLVPSVVTY 584
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
L+DG ++ I + + E MK GC PN Y +I ++ A ++L MQ
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ- 643
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ G+ P+ +YT ++ G++ A + +V+ G
Sbjct: 644 -DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 144/349 (41%), Gaps = 39/349 (11%)
Query: 107 FRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA-TIT 165
F + G + DEVT + + + T+ F+ ET K +TT ++
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL-FILETLVKMR------ILTTPHSLN 550
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
++ +L + E ++ + P + Y TL+ L R G+ + +LE M+L
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
G C P+ + YTI+I+ C+ G R+ EA +L M G P+ VTY +
Sbjct: 611 G--CLPNVYPYTIIINGLCQFG-----------RVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNE-IDRAVE------VLR 338
+ G ++ RALE M ++G N Y SL++ + + + ID + E LR
Sbjct: 658 VKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR 717
Query: 339 --DMQRLNHGIPSSSSYTPIIHA--------LCEAGRVAEAWSFLVELVDGGNVPREYTY 388
D + +N I I LC+ GR E+ + +++ G V E
Sbjct: 718 ETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERG-VFLEKAM 776
Query: 389 RLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPE 437
++ + C + + + +K+G +K +V + ++G E
Sbjct: 777 DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAE 825
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
+L FF W++ GF HD T M L RA + L E + + N T
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMV---RDGCKPN---TV 395
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI G EA F +M++ C PD Y TLI + G A + ++M
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 455
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G PD FTY+++I+ + G L A RLF M+ +G P++VT+
Sbjct: 456 QEAGL--SPDTFTYSVIINCLGKAG-----------HLPAAHRLFCEMVGQGCTPNLVTF 502
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N +I K + AL+L+ DM+ G P++VTY ++ ++ A V +MQR
Sbjct: 503 NIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQR 562
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG---NVP 383
N +P Y ++ +AG V +AW + ++ G NVP
Sbjct: 563 KNW-VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 206 LCRVGNFARA-KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAG 264
L ++ N+A A F PGF D TYT ++ + R ++ E
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGF--KHDGHTYTTMVGNLGR-----------AKQFGEIN 379
Query: 265 RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYY 324
+L M+ G P+ VTYN LI + ++ A+ +F M++ GC P+RVTY +LI +
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 325 SATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
+ +D A+++ + MQ P + +Y+ II+ L +AG + A E+V G P
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLS-PDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 385 EYTYRLV 391
T+ ++
Sbjct: 499 LVTFNIM 505
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 264 GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
G + L GF D TY ++ + + +L ++M + GC PN VTY+ LI
Sbjct: 344 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS 403
Query: 324 YSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
Y N + A+ V MQ P +Y +I +AG + A + + G P
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCE-PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSP 462
Query: 384 REYTYRLVCDKLCLAG 399
+TY ++ + L AG
Sbjct: 463 DTFTYSVIINCLGKAG 478
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 140/329 (42%), Gaps = 37/329 (11%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
SL FF W ++ +T + E+A L +++W LK+ + + I+
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLD------ISGE 147
Query: 163 TITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T+ +I+ G+ G +A F + K C+ + YN+L++ALC V F A L+ +
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILT------------GCRKATRRR---------- 259
M G PD TY IL++ +C G + G R R
Sbjct: 208 MIRKGL--KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNA 265
Query: 260 --LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
L A + M GFVPD+ T+N LI+ K+ ++ +E++ K G + TY
Sbjct: 266 GYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTY 325
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+LI S +ID A +L + H P S Y PII +C G +A+SF ++
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHK-PFPSLYAPIIKGMCRNGMFDDAFSFFSDMK 384
Query: 378 DGGNVPREYTYRLVCDKLCLAGEDGLLGD 406
+ P Y ++ + + G G D
Sbjct: 385 VKAHPPNRPVYTML---ITMCGRGGKFVD 410
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 115/270 (42%), Gaps = 22/270 (8%)
Query: 150 HHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRV 209
+ N + N + +IK L + A F M + C PD Y TL+ LC+
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 210 GNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRL 269
A LL++M+ G C P Y +LI C+ G LT +L
Sbjct: 236 ERIDEAVLLLDEMQSEG--CSPSPVIYNVLIDGLCKKGDLT-----------RVTKLVDN 282
Query: 270 MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNE 329
M KG VP+ VTYN LI G C ++ +A+ L E M C PN VTY +LI
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 330 IDRAVEVLRDMQR----LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
AV +L M+ LN I Y+ +I L + G+ EA S ++ + G P
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHI-----YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI 397
Query: 386 YTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
Y ++ D LC G+ + ++ I +G
Sbjct: 398 VVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 31/259 (11%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI L ++G + + M C P+ YNTLI+ LC G +A LLE+M
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM--VS 320
Query: 227 FWCPPDAFTYTILISSYCRH--------------------------GILTGCRKATRRRL 260
C P+ TY LI+ + +++G K +
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE- 379
Query: 261 YEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
EA L+R M KG P++V Y+ L+DG C+ + A E+ M GC PN TY SL
Sbjct: 380 -EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
++ + T + AV+V ++M + + Y+ +I LC GRV EA +++ G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCS-RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 381 NVPREYTYRLVCDKLCLAG 399
P Y + LC G
Sbjct: 498 IKPDTVAYSSIIKGLCGIG 516
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA L M+ C P YN LI LC+ G+ R L++ M L G C P+ TY
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG--CVPNEVTYNT 297
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI C G +L +A L M+ +P+ VTY LI+G K R A
Sbjct: 298 LIHGLCLKG-----------KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+ L M+++G N+ Y LI + + A+ + R M P+ Y+ ++
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE-KGCKPNIVVYSVLVD 405
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
LC G+ EA L ++ G +P YTY
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 119/298 (39%), Gaps = 88/298 (29%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
H N I + I+ L K +G A EA + +M + C+P+I Y+ L+ LCR G
Sbjct: 359 HLNQHIYSVLISGLFK----EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGIL------------TGCRK------- 254
AK +L +M G C P+A+TY+ L+ + + G+ TGC +
Sbjct: 415 EAKEILNRMIASG--CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 255 -----ATRRRLYEAGRLFRLML--------------FKGFV------------------- 276
R+ EA ++ ML KG
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 277 -----PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS-ATNEI 330
PDVVTYN L+DG C I RA++L M +GC P+ +T ++ + S +N
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSC 592
Query: 331 DRAVEVLRDM-------QRLNHGI------------PSSSSYTPIIHALCEAGRVAEA 369
D+ L ++ QR++ P +S++ I+ +C+ ++ A
Sbjct: 593 DKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKG----CAPNRVTYDSLIRYYSATNEIDRAV 334
V ++N++++ R LE ++ + +PN ++++ +I+ +DRA+
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 335 EVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDK 394
EV R M +P +Y ++ LC+ R+ EA L E+ G P Y ++ D
Sbjct: 208 EVFRGMPE-RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266
Query: 395 LCLAGE 400
LC G+
Sbjct: 267 LCKKGD 272
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 27/253 (10%)
Query: 174 QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFW-CP-P 231
+G ++ +M++ PDI +N+ I ALC+ G A + MEL + P P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 232 DAFTYTILISSYCRHGILTGCR---KATRR---------------------RLYEAGRLF 267
++ TY +++ +C+ G+L + ++ R + EA +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 268 RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
+ M KG P + +YN L+DG CK + A + MK+ G P+ VTY L+ Y +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 328 NEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
++D A +L++M R N+ +P++ + ++H+L + GR++EA L ++ + G T
Sbjct: 410 GKVDAAKSLLQEMMR-NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 388 YRLVCDKLCLAGE 400
++ D LC +GE
Sbjct: 469 CNIIVDGLCGSGE 481
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI+ L + A F M + C+P+ + L+ C+ G + LL
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
ME F P+ Y ++SS+CR G R ++ ++ M +G VPD+V
Sbjct: 207 AME--SFGVLPNKVIYNTIVSSFCREG-----------RNDDSEKMVEKMREEGLVPDIV 253
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCA----PNRVTYDSLIRYYSATNEIDRAVEV 336
T+N+ I CK ++ A +F DM+ PN +TY+ +++ + ++ A +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA-KT 312
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
L + R N + S SY + L G+ EA + L ++ D G P Y+Y ++ D LC
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 397 LAG 399
G
Sbjct: 373 KLG 375
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 28/251 (11%)
Query: 189 QYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGI 248
+ +C PD+ Y+TL+ LC+ G FA AK L +M G PD+ Y I I +C+ G
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM--MGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 249 LT------------GCRKA------------TRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
++ GC K+ + +++E L M KG P++ TYN
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
I C+ +++ A L ++M +K APN ++ LI + + D A EV +
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLL 404
Y+ + + L AG++ +A L ++D G + Y+ + + LC E +
Sbjct: 695 G--QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVA 752
Query: 405 GDEVHERIKNG 415
+H+ I G
Sbjct: 753 SGILHKMIDRG 763
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 27/256 (10%)
Query: 145 ETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIY 204
ET K + P + + L+ L + G+ S+A MK+ PD Y L++
Sbjct: 346 ETVLKQMTDKGIGP-SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 205 ALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAG 264
C VG AK LL++M C P+A+T IL+ S + G R+ EA
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNN--CLPNAYTCNILLHSLWKMG-----------RISEAE 451
Query: 265 RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYY 324
L R M KG+ D VT N ++DG C + + +A+E+ + M+ G A
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA------------- 498
Query: 325 SATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
+ N + + ++ D N+ +P +Y+ +++ LC+AGR AEA + E++ P
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 385 EYTYRLVCDKLCLAGE 400
Y + C G+
Sbjct: 559 SVAYNIFIHHFCKQGK 574
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 59/316 (18%)
Query: 128 CVLVRANATKTLWGFLKETANKHHNNHRNNPITTA-TITCLIKLLGEQGLASEASLTFYR 186
C L + KT+ G +K RN A T CL+ G A
Sbjct: 372 CKLGMLSDAKTIVGLMK----------RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
M + +C P+ N L+++L ++G + A+ LL +M G+ D T I++ C
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL--DTVTCNIIVDGLCGS 479
Query: 247 G-------ILTGCRKATRRRLYEAGRLFRLMLFKGFV-----PDVVTYNALIDGCCKTYR 294
G I+ G R L G + ++ + PD++TY+ L++G CK R
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN---------- 344
A LF +M + P+ V Y+ I ++ +I A VL+DM++
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 345 --------------HGI----------PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
HG+ P+ +Y I LCE +V +A + L E++
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 381 NVPREYTYRLVCDKLC 396
P ++++ + + C
Sbjct: 660 IAPNVFSFKYLIEAFC 675
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 241 SSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALE 300
S Y + +L C K RR+ L++ M+ G P T+N LI C + + A E
Sbjct: 111 SVYLYNLLLESCIK--ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 301 LFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHAL 360
LF++M +KGC PN T+ L+R Y D+ +E+L M+ +P+ Y I+ +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV-LPNKVIYNTIVSSF 227
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
C GR ++ + ++ + G VP T+ LC G+
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T +I + ++G SEA + M + PD+ YN+LI LC G AK +L+ M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G C PD TY LI+ +C+ +R+ E +LFR M +G V D +TY
Sbjct: 306 VTKG--CLPDVVTYNTLINGFCKS-----------KRVDEGTKLFREMAQRGLVGDTITY 352
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N +I G + R A E+F M + PN TY L+ +++A+ + +MQ+
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ ++Y +IH +C+ G V +AW L G P +Y + C
Sbjct: 410 SEIEL-DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F+ M+ D+ +YN +I LCR F A ++ +M G+ PD T + LI+ +
Sbjct: 92 FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY--EPDVVTVSSLINGF 149
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C+ R+++A L M GF PDVV YN +IDG CK + A+ELF+
Sbjct: 150 CQGN-----------RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M++ G + VTY+SL+ + A ++RDM + +P+ ++T +I +
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAVIDVFVKE 257
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
G+ +EA E+ P +TY + + LC+ G
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F +M Q P I ++ ++ + + N+ L ME+ G D ++Y I+I+
Sbjct: 57 FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGI--GHDLYSYNIVINCL 114
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
CR R + + ++M F G+ PDVVT ++LI+G C+ R+ A++L
Sbjct: 115 CR----------CSRFVIALSVVGKMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCE 362
M++ G P+ V Y+++I ++ AVE+ M+R G+ + + +Y ++ LC
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER--DGVRADAVTYNSLVAGLCC 221
Query: 363 AGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+GR ++A + ++V VP T+ V D G+
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 77/200 (38%), Gaps = 23/200 (11%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI L G EA M C PD+ YNTLI C+ L +M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR---------------------RLY 261
G D TY +I Y + G ++ R R+
Sbjct: 341 AQRGL--VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
+A LF M D+ TYN +I G CK ++ A +LF + KG P+ V+Y ++I
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 322 RYYSATNEIDRAVEVLRDMQ 341
+ + D++ + R MQ
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQ 478
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T +I+ + G A F RM RP+IR Y+ L+Y LC +A L E
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M+ D TY I+I C+ G + +A LFR + KG PDVV
Sbjct: 406 NMQKSEI--ELDITTYNIVIHGMCKIG-----------NVEDAWDLFRSLSCKGLKPDVV 452
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
+Y +I G C+ + ++ L+ M++ G P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T C++ L + G +A F M++ +I YNTLI LCR A +++QM
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G P+ TY LI +C G +L +A L R + +G P +VTY
Sbjct: 330 KSDGI--NPNLITYNTLIDGFCGVG-----------KLGKALSLCRDLKSRGLSPSLVTY 376
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N L+ G C+ A ++ ++M+++G P++VTY LI ++ ++ +++A+++ M+
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
L +P +Y+ +IH C G++ EA +V+ P E Y + C G
Sbjct: 437 LGL-VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T LI L + G+ + + +M++ P++ YN ++ LC+ G A + ++M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G C + TY LI CR +L EA ++ M G P+++TY
Sbjct: 295 RERGVSC--NIVTYNTLIGGLCRE-----------MKLNEANKVVDQMKSDGINPNLITY 341
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LIDG C ++ +AL L D+K +G +P+ VTY+ L+ + + A +++++M+
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
GI PS +YT +I + + +A + + + G VP +TY ++ C+ G+
Sbjct: 402 --RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 27/254 (10%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T LI L + +EA+ +MK P++ YNTLI C VG +A L
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR----------------------- 258
++ G P TY IL+S +CR G +G K +
Sbjct: 364 LKSRGL--SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 259 -RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
+ +A +L M G VPDV TY+ LI G C ++ A LF+ M +K C PN V Y
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+++I Y RA+++L++M+ P+ +SY +I LC+ + EA + +++
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEE-KELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Query: 378 DGGNVPREYTYRLV 391
D G P L+
Sbjct: 541 DSGIDPSTSILSLI 554
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 145/319 (45%), Gaps = 24/319 (7%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L S+ +F + +GF + +V +++ W F E +K +
Sbjct: 110 LNLSISYFNEM-VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKV-------VL 161
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ LIK E G ++ + ++ P++ Y TLI C+ G +AK L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+M G + TYT+LI+ ++G+ +++ +E ++ M G P++
Sbjct: 222 FEMGKLGL--VANERTYTVLINGLFKNGV--------KKQGFE---MYEKMQEDGVFPNL 268
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TYN +++ CK R + A ++F++M+++G + N VTY++LI +++ A +V+
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
M+ + GI P+ +Y +I C G++ +A S +L G P TY ++ C
Sbjct: 329 MK--SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 399 GEDGLLGDEVHERIKNGMR 417
G+ V E + G++
Sbjct: 387 GDTSGAAKMVKEMEERGIK 405
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T + LI L G S+AS M + P++ +N LI A + G F A+ L +
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M PD FTY LI+ +C H RL +A ++F M+ K PD+
Sbjct: 280 DMIKRSI--DPDIFTYNSLINGFCMHD-----------RLDKAKQMFEFMVSKDCFPDLD 326
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI G CK+ R++ ELF +M +G + VTY +LI+ + D A +V +
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK-- 384
Query: 341 QRLNHGIPSSSS------------------------------------YTPIIHALCEAG 364
Q ++ G+P YT +I +C+AG
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 365 RVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+V + W L G P TY + LC
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 120/297 (40%), Gaps = 58/297 (19%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI L ASEA RM Q C+P++ Y ++ LC+ G+ A LL
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 221 QME-------------LPGFWCP--------------------PDAFTYTILISSYCRHG 247
+ME + C P+ TY+ LIS C +G
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 248 ILTGCRK------------------------ATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
+ + + EA +L M+ + PD+ TYN
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+LI+G C R+ +A ++FE M K C P+ TY++LI+ + + ++ E+ R+M
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ + +YT +I L G A ++V G P TY ++ D LC G+
Sbjct: 355 GL-VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 122/287 (42%), Gaps = 24/287 (8%)
Query: 108 RWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKE----TANKHHNNHRNNPITTAT 163
RW +A S D + +++ LV NA + F+KE A K H++ I
Sbjct: 235 RWSDA-SQLLSDMIE-KKINPNLVTFNAL--IDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 164 IT--CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T LI +A F M C PD+ YNTLI C+ L +
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M G D TYT LI G C A + +F+ M+ G PD++T
Sbjct: 351 MSHRGLV--GDTVTYTTLIQGLFHDG---DCDNAQK--------VFKQMVSDGVPPDIMT 397
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y+ L+DG C ++++ALE+F+ M+K + Y ++I ++D ++ +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
L P+ +Y +I LC + EA++ L ++ + G +P TY
Sbjct: 458 -LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 36/264 (13%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S+A +M + RPD + TLI+ L + A L+++M G C P+ TY
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYG 154
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++++ C+ G + A L M DVV +N +ID CK +
Sbjct: 155 VVVNGLCKRG-----------DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTP 355
AL LF++M+ KG PN VTY SLI + A ++L DM +++N P+ ++
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNA 260
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
+I A + G+ EA +++ P +TY + + C+ H+R+
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM-----------HDRLD-- 307
Query: 416 MRKRYKQTMMVKPVMTRKGYPEIE 439
K M + ++++ +P+++
Sbjct: 308 -----KAKQMFEFMVSKDCFPDLD 326
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
+HR T T T LI+ L G A F +M PDI Y+ L+ LC G
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
+A + + M+ D + YT +I C+ G ++ + LF +
Sbjct: 412 EKALEVFDYMQKSEI--KLDIYIYTTMIEGMCKAG-----------KVDDGWDLFCSLSL 458
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
KG P+VVTYN +I G C +Q A L + MK+ G P+ TY++LIR + +
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 333 AVEVLRDMQ 341
+ E++R+M+
Sbjct: 519 SAELIREMR 527
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M++ ++ YN LI CR + A LL +M G+ P T + L++ YC
Sbjct: 35 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY--EPSIVTLSSLLNGYC- 91
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG +R+ +A L M+ G+ PD +T+ LI G + A+ L + M
Sbjct: 92 HG----------KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
++GC PN VTY ++ +ID A +L M+ + II +LC+
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRH 200
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE----DGLLGDEVHERI 412
V +A + E+ G P TY + LC G LL D + ++I
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 27/331 (8%)
Query: 69 RNLNDEHRKLHDGLLLLGPAAYRDPHRVDLGLR---KSLEFFRWVEAHSGFTHDEVTCRE 125
RNL DE HD L + R LR +++E F ++ GF TC
Sbjct: 137 RNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECF-YLMKEKGFYPKTETCNH 195
Query: 126 MACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFY 185
+ +L R N + W F A+ + ++N T +I +L ++G +A
Sbjct: 196 ILTLLSRLNRIENAWVFY---ADMYRMEIKSN---VYTFNIMINVLCKEGKLKKAKGFLG 249
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
M+ + +P I YNTL+ G A+ ++ +M+ GF PD TY ++S C
Sbjct: 250 IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ--PDMQTYNPILSWMCN 307
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G A + R M G VPD V+YN LI GC ++ A ++M
Sbjct: 308 EG--------------RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
K+G P TY++LI N+I+ A ++R++ R + S +Y +I+ C+ G
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI-REKGIVLDSVTYNILINGYCQHGD 412
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+A++ E++ G P ++TY + LC
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 107/249 (42%), Gaps = 36/249 (14%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG------ 247
P YNTLI+ L A+ L+ ++ G D+ TY ILI+ YC+HG
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL--DSVTYNILINGYCQHGDAKKAF 417
Query: 248 ---------------------ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
I CRK R EA LF ++ KG PD+V N L+
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR---EADELFEKVVGKGMKPDLVMMNTLM 474
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
DG C + RA L ++M P+ VTY+ L+R + + A E++ +M+R G
Sbjct: 475 DGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR--RG 532
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLG 405
I P SY +I + G A+ E++ G P TY + L ++G L
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS-KNQEGELA 591
Query: 406 DEVHERIKN 414
+E+ +K+
Sbjct: 592 EELLREMKS 600
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T T LI +L + EA F ++ +PD+ NTL+ C +GN RA LL
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK---ATRRRLYEAGRL---------- 266
++M++ PD TY L+ C G R+ +RR + +
Sbjct: 491 KEMDMMSI--NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 267 --------FRL---MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
F + ML GF P ++TYNAL+ G K + A EL +MK +G PN
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608
Query: 316 TYDSLIRYYS 325
++ S+I S
Sbjct: 609 SFCSVIEAMS 618
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
A I CL K A++ M+ P++ +NT + G+ + +LE
Sbjct: 429 NAVIDCLCK----ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ + GF PD T++++I+ CR + + +A F+ ML G P+ +
Sbjct: 485 KLLVHGF--KPDVITFSLIINCLCRA-----------KEIKDAFDCFKEMLEWGIEPNEI 531
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI CC T R+++LF MK+ G +P+ Y++ I+ + ++ +A E+L+ M
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
R+ P + +Y+ +I AL E+GR +EA + G VP YT RLV
Sbjct: 592 LRIGLK-PDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 196 IRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKA 255
+ +YN +I LC+ A L +M+ G P+ T+ +S Y G +
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGI--SPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
+ +L GF PDV+T++ +I+ C+ I+ A + F++M + G PN +
Sbjct: 483 LEK-----------LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
TY+ LIR +T + DR+V++ M+ N P +Y I + C+ +V +A L
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKE-NGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 376 LVDGGNVPREYTYRLVCDKLCLAGED 401
++ G P +TY + L +G +
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRE 616
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 114/287 (39%), Gaps = 21/287 (7%)
Query: 103 SLEFFRWVEAHSG-FTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITT 161
SL F+ WV + D+ + L R LKE + + I+
Sbjct: 92 SLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYR------ISD 145
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
+ LI G GLA + F ++ +P R YN +I AL + + A +Q
Sbjct: 146 ELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQ 205
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M G C PD FTY ILI C+ G++ EA RL + M +G P+V T
Sbjct: 206 MRSDG--CKPDRFTYNILIHGVCKKGVVD-----------EAIRLVKQMEQEGNRPNVFT 252
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y LIDG R+ AL+ E M+ + PN T + + +A EVL
Sbjct: 253 YTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFM 312
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ + Y +++ L E FL ++ + G +P T+
Sbjct: 313 EKDSNL-QRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTF 358
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 43/328 (13%)
Query: 78 LHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRA---- 133
L DG L+ G RVD L K LE R + + +E T R + R
Sbjct: 256 LIDGFLIAG--------RVDEAL-KQLEMMRVRKLNP----NEATIRTFVHGIFRCLPPC 302
Query: 134 NATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCR 193
A + L GF+++ +N + A + CL +A E ++ +
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGY------DAVLYCL----SNNSMAKETGQFLRKIGERGYI 352
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD +N + L + + + + G P Y +L+ +
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG--VKPGFNGYLVLVQALLNA------- 403
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
+R E R + M G + V +YNA+ID CK RI+ A +M+ +G +PN
Sbjct: 404 ----QRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPN 459
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSF 372
VT+++ + YS ++ + VL + L HG P +++ II+ LC A + +A+
Sbjct: 460 LVTFNTFLSGYSVRGDVKKVHGVLEKL--LVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAGE 400
E+++ G P E TY ++ C G+
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGD 545
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 100/254 (39%), Gaps = 49/254 (19%)
Query: 180 ASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
A L F +M+ C+PD YN LI+ +C+ G A L++QME G P+ FTYTIL
Sbjct: 199 AYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEG--NRPNVFTYTIL 256
Query: 240 ISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
I + G R+ EA + +M + P+ T + G + +A
Sbjct: 257 IDGFLIAG-----------RVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAF 305
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS------- 352
E+ +K RV YD+++ S + + LR + + IP SS+
Sbjct: 306 EVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGY-IPDSSTFNAAMSC 364
Query: 353 ----------------------------YTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
Y ++ AL A R +E +L ++ G +
Sbjct: 365 LLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSS 424
Query: 385 EYTYRLVCDKLCLA 398
Y+Y V D LC A
Sbjct: 425 VYSYNAVIDCLCKA 438
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 19/291 (6%)
Query: 106 FFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATIT 165
FF W F H + + +L + LW FL E ++ I++
Sbjct: 88 FFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFE-----ISSKVFW 142
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
+ + L SEA F RM ++ +P + + L+++LC + A+ + +
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK-- 200
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
GF P A TY+IL+ + R +G RK +F ML + V D++ YNAL
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARK-----------VFDEMLERNCVVDLLAYNAL 249
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
+D CK+ + ++F++M G P+ ++ I Y ++ A +VL M+R +
Sbjct: 250 LDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 309
Query: 346 GIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+P+ ++ II LC+ +V +A+ L E++ G P +TY + C
Sbjct: 310 -VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 108/247 (43%), Gaps = 27/247 (10%)
Query: 142 FLKETANKHHNNHRNNPITTA----------TITCLIKLLGEQGLASEASLTFYRMKQYH 191
L +K H NH A T + L++ AS A F M + +
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 192 CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTG 251
C D+ AYN L+ ALC+ G+ + ++M G PDA+++ I I +YC G +
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL--KPDAYSFAIFIHAYCDAGDVHS 296
Query: 252 CRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
K R M VP+V T+N +I CK ++ A L ++M +KG
Sbjct: 297 AYKVLDR-----------MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAG---RVAE 368
P+ TY+S++ Y+ E++RA ++L M R +P +Y ++ L G R E
Sbjct: 346 PDTWTYNSIMAYHCDHCEVNRATKLLSRMDR-TKCLPDRHTYNMVLKLLIRIGRFDRATE 404
Query: 369 AWSFLVE 375
W + E
Sbjct: 405 IWEGMSE 411
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
RMK+Y P++ +N +I LC+ A LL++M G PD +TY +++ +C
Sbjct: 303 RMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG--ANPDTWTYNSIMAYHCD 360
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
H C + A +L M +PD TYN ++ + R RA E++E M
Sbjct: 361 H-----CE------VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGM 409
Query: 306 KKKGCAPNRVTYD----SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
++ P TY L+R E R E++ ++ GIP S+ ++
Sbjct: 410 SERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM-----IDEGIPPYSTTVEML 460
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 15/206 (7%)
Query: 196 IRAYNTLIYALCRVGNFARA-KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
+ +Y+ L+ L FA FL+E E F F I+ +Y R + +
Sbjct: 102 LESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFW--IVFRAYSRANLPS---- 155
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
EA R F M+ G P V + L+ C + A E F K G P+
Sbjct: 156 -------EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSA 208
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
TY L+R ++ + A +V +M N + +Y ++ ALC++G V +
Sbjct: 209 KTYSILVRGWARIRDASGARKVFDEMLERN-CVVDLLAYNALLDALCKSGDVDGGYKMFQ 267
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAGE 400
E+ + G P Y++ + C AG+
Sbjct: 268 EMGNLGLKPDAYSFAIFIHAYCDAGD 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 15/176 (8%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T +IK L + +A L M Q PD YN+++ C RA LL +M
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ C PD TY +++ R G R A ++ M + F P V TY
Sbjct: 375 DRTK--CLPDRHTYNMVLKLLIRIG-----------RFDRATEIWEGMSERKFYPTVATY 421
Query: 283 NALIDGCC-KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
+I G K +++ A FE M +G P T + L ++D V+VL
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD-VVDVL 476
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 24/309 (7%)
Query: 106 FFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATIT 165
FF+W E + H M + K +W + K N T
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLN-------VETFC 172
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
+++ EA F M++Y P++ A+N L+ ALC+ N +A+ + E M
Sbjct: 173 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-D 231
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
F PD+ TY+IL+ + + L R+ +FR M+ G PD+VTY+ +
Sbjct: 232 RF--TPDSKTYSILLEGWGKEPNLPKARE-----------VFREMIDAGCHPDIVTYSIM 278
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
+D CK R+ AL + M C P Y L+ Y N ++ AV+ +M+R
Sbjct: 279 VDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER--S 336
Query: 346 GIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLL 404
G+ + + + +I A C+A R+ + L E+ G P + ++ L GE
Sbjct: 337 GMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396
Query: 405 GDEVHERIK 413
D + IK
Sbjct: 397 FDVFRKMIK 405
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 46/261 (17%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+ T + L++ G++ +A F M C PDI Y+ ++ LC+ G A ++
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M+ P C P F Y++L+ +Y T RL EA F M G DV
Sbjct: 297 SMD-PSI-CKPTTFIYSVLVHTY-----------GTENRLEEAVDTFLEMERSGMKADVA 343
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
+N+LI CK R++ + ++MK KG PN + + ++R+ E D A +V R M
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Query: 341 QRL--------------------------------NHGI-PSSSSYTPIIHALCEAGRVA 367
++ G+ PS +++ +I+ LCE
Sbjct: 404 IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Query: 368 EAWSFLVELVDGGNVPREYTY 388
+A L E+++ G P T+
Sbjct: 464 KACVLLEEMIEMGIRPSGVTF 484
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
TT + L+ G + EA TF M++ + D+ +N+LI A C+ +L
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
++M+ G P++ + I++ RH I G + EA +FR M+ K PD
Sbjct: 366 KEMKSKG--VTPNSKSCNIIL----RHLIERGEKD-------EAFDVFRKMI-KVCEPDA 411
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TY +I C+ ++ A ++++ M+KKG P+ T+ LI +A +L +
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGR 365
M + GI PS ++ + L + R
Sbjct: 472 M--IEMGIRPSGVTFGRLRQLLIKEER 496
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 31/262 (11%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I T ++ + + G A +M++ H +PD+ Y+ +I LC+ G+ + A++L
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR-------------------- 258
+M G P+ FTY +I +C G + ++ R
Sbjct: 319 FSEMLEKGI--APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 259 ----RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
+L+EA +L ML + PD VTYN++I G CK R A +F+ M +P+
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDV 432
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
VT++++I Y +D +++LR++ R + ++++Y +IH CE + A
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 375 ELVDGGNVPREYTYRLVCDKLC 396
E++ G P T ++ C
Sbjct: 492 EMISHGVCPDTITCNILLYGFC 513
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 55/270 (20%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T C+I G S+A M + PD+ +N LI A + G A+ L ++M
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ PD TY +I +C+H R +A +F LM PDVVT+
Sbjct: 393 LHRCIF--PDTVTYNSMIYGFCKHN-----------RFDDAKHMFDLMA----SPDVVTF 435
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N +ID C+ R+ ++L ++ ++G N TY++LI + + ++ A ++ ++M
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-- 493
Query: 343 LNHGI------------------------------------PSSSSYTPIIHALCEAGRV 366
++HG+ + +Y IIH +C+ +V
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
EAW L G P TY ++ C
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 118/311 (37%), Gaps = 53/311 (17%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI ++G EA M PD YN++IY C+ F AK + + M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
PD T+ +I YCR +R+ E +L R + +G V + TY
Sbjct: 428 ------ASPDVVTFNTIIDVYCR-----------AKRVDEGMQLLREISRRGLVANTTTY 470
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LI G C+ + A +LF++M G P+ +T + L+ + +++ A+E+ +Q
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL-------------------------- 376
+ + +Y IIH +C+ +V EAW L
Sbjct: 531 SKIDL-DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 377 ---------VDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMMVK 427
D G+ P TY + AGE + + E NG M +
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAE 649
Query: 428 PVMTRKGYPEI 438
++ R EI
Sbjct: 650 EIICRVSDEEI 660
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 41/300 (13%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L +++FF ++ F + V C ++ V VR N ++ R P+
Sbjct: 87 LDDAIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKM------EIRRIPL 139
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ LIK + S + TF ++ + +PD+ +NTL++ LC + A L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
M GF EA LF M+ G P V
Sbjct: 200 GYMVETGFL---------------------------------EAVALFDQMVEIGLTPVV 226
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+T+N LI+G C R+ A L M KG + VTY +++ + A+ +L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M+ H P Y+ II LC+ G ++A E+++ G P +TY + D C G
Sbjct: 287 MEE-THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
YNTLI+ C V N A+ L ++M G PD T IL+ +C +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVC--PDTITCNILLYGFCEN----------- 515
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
+L EA LF ++ D V YN +I G CK ++ A +LF + G P+ TY
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+ +I + + I A + M+ H P +S+Y +I +AG + ++ + E+
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHE-PDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Query: 378 DGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG 415
G +T ++ + +C ++ ++ + + +I NG
Sbjct: 635 SNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKI-NG 671
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA F +M + P + +NTLI LC G A L+ +M G D TY
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI--DVVTYGT 266
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
+++ C+ G T+ L L M PDVV Y+A+ID CK A
Sbjct: 267 IVNGMCKMG-------DTKSAL----NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTPI 356
LF +M +KG APN TY+ +I + + A +LRDM + +N P ++ +
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN---PDVLTFNAL 372
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
I A + G++ EA E++ P TY + C
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 119 DEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLAS 178
D VT + V RA L+E + R T T LI E +
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREIS------RRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
A F M + PD N L+Y C A L E +++ D Y I
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAYNI 542
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
+I HG+ G ++ EA LF + G PDV TYN +I G C I A
Sbjct: 543 II-----HGMCKG------SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
LF MK G P+ TY++LIR EID+++E++ +M+
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 31/262 (11%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I T ++ + + G A +M++ H +PD+ Y+ +I LC+ G+ + A++L
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR-------------------- 258
+M G P+ FTY +I +C G + ++ R
Sbjct: 319 FSEMLEKGI--APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 259 ----RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
+L+EA +L ML + PD VTYN++I G CK R A +F+ M +P+
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDV 432
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
VT++++I Y +D +++LR++ R + ++++Y +IH CE + A
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 375 ELVDGGNVPREYTYRLVCDKLC 396
E++ G P T ++ C
Sbjct: 492 EMISHGVCPDTITCNILLYGFC 513
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T LI ++G EA M PD YN++IY C+ F AK
Sbjct: 363 NP-DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+ + M PD T+ +I YCR +R+ E +L R + +G V
Sbjct: 422 HMFDLM------ASPDVVTFNTIIDVYCR-----------AKRVDEGMQLLREISRRGLV 464
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
+ TYN LI G C+ + A +LF++M G P+ +T + L+ + +++ A+E+
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+Q + + +Y IIH +C+ +V EAW L G P TY ++ C
Sbjct: 525 FEVIQMSKIDL-DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 41/300 (13%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L +++FF ++ F + V C ++ V VR N ++ R P+
Sbjct: 87 LDDAIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKM------EIRRIPL 139
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ LIK + S + TF ++ + +PD+ +NTL++ LC + A L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
M GF EA LF M+ G P V
Sbjct: 200 GYMVETGFL---------------------------------EAVALFDQMVEIGLTPVV 226
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+T+N LI+G C R+ A L M KG + VTY +++ + A+ +L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M+ H P Y+ II LC+ G ++A E+++ G P +TY + D C G
Sbjct: 287 MEE-THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG---------- 247
YNTLI+ C V N A+ L ++M G PD T IL+ +C +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVC--PDTITCNILLYGFCENEKLEEALELFE 526
Query: 248 ----------------ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK 291
I+ G K ++ + EA LF + G PDV TYN +I G C
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSK--VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 292 TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
I A LF MK G P+ TY++LIR EID+++E++ +M+ ++G +
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR--SNGFSGDA 642
Query: 352 SYTPIIHALCEAGRVAEAWS 371
++ L GR+ +++S
Sbjct: 643 FTIKMVADLITDGRLDKSFS 662
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA F +M + P + +NTLI LC G A L+ +M G D TY
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI--DVVTYGT 266
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
+++ C+ G T+ L L M PDVV Y+A+ID CK A
Sbjct: 267 IVNGMCKMG-------DTKSAL----NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTPI 356
LF +M +KG APN TY+ +I + + A +LRDM + +N P ++ +
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN---PDVLTFNAL 372
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
I A + G++ EA E++ P TY + C
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 23/314 (7%)
Query: 102 KSLEFFRWVEAH-SGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
K+L+FF +++ H + HD + + R + T+W + + R P +
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM-----RSLRIGP-S 125
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T + + G +A F M ++ C D+ ++NT++ LC+ +A L
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
L G + D TY ++++ +C +R +A + + M+ +G P++
Sbjct: 186 A--LRGRFSV-DTVTYNVILNGWC-----------LIKRTPKALEVLKEMVERGINPNLT 231
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN ++ G + +I+ A E F +MKK+ C + VTY +++ + EI RA V +M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
R +PS ++Y +I LC+ V A E+V G P TY ++ L AGE
Sbjct: 292 IR-EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 401 DGLLGDEVHERIKN 414
G+E+ +R++N
Sbjct: 351 FS-RGEELMQRMEN 363
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T T ++K G A F MK+ C D+ Y T+++ G RA+
Sbjct: 227 NPNLT-TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+ ++M G P TY +I C+ + + A +F M+ +G+
Sbjct: 286 NVFDEMIREGVL--PSVATYNAMIQVLCK-----------KDNVENAVVMFEEMVRRGYE 332
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
P+V TYN LI G R EL + M+ +GC PN TY+ +IRYYS +E+++A+ +
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 337 LRDMQRLNHGIPSSSSYTPIIHAL 360
M +P+ +Y +I +
Sbjct: 393 FEKMGS-GDCLPNLDTYNILISGM 415
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+ T T L+ L E G EA + C D +YNTLI C A
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
L++M G PD +TY+ILI C ++ EA + + G +PD
Sbjct: 563 LDEMVKRGL--KPDNYTYSILI-----------CGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
V TY+ +IDGCCK R + E F++M K PN V Y+ LIR Y + + A+E+
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 339 DMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
DM+ + GI P+S++YT +I + RV EA E+ G P + Y + D
Sbjct: 670 DMK--HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 21/268 (7%)
Query: 110 VEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIK 169
V A+ G + TC + LVRAN ++ + T I
Sbjct: 216 VLANKGMFPSKTTCNILLTSLVRANE-------FQKCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 170 LLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWC 229
+ G EA F +M++ P++ +NT+I L G + A E+M G
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM-- 326
Query: 230 PPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGC 289
P TY+IL+ R +R+ +A + + M KGF P+V+ YN LID
Sbjct: 327 EPTLITYSILVKGLTRA-----------KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
+ + +A+E+ + M KG + TY++LI+ Y + D A +L++M + + +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV-N 434
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELV 377
S+T +I LC A F+ E++
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEML 462
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+T++T LIK + G A A M + ++ ++I LC F A
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
+ +M L P T LIS C+HG + +A L+ L KGFV D
Sbjct: 458 VGEMLLRNM--SPGGGLLTTLISGLCKHG-----------KHSKALELWFQFLNKGFVVD 504
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
T NAL+ G C+ ++ A + +++ +GC +RV+Y++LI ++D A L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 339 DMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+M + G+ P + +Y+ +I L +V EA F + G +P YTY ++ D C
Sbjct: 565 EM--VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 398 A 398
A
Sbjct: 623 A 623
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
E F M + +P+ YN LI A CR G + A L E M+ G P++ TYT
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI--SPNSATYTS 685
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI + R+ EA LF M +G P+V Y ALIDG K ++ +
Sbjct: 686 LIKGM-----------SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
L +M K PN++TY +I Y+ + A +L +M R +P S +Y I+
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM-REKGIVPDSITYKEFIY 793
Query: 359 ALCEAGRVAEAW 370
+ G V EA+
Sbjct: 794 GYLKQGGVLEAF 805
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD+ + T I A C+ G A L +ME G P+ T+ +I G
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV--APNVVTFNTVIDGLGMCG------ 309
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R EA M+ +G P ++TY+ L+ G + RI A + ++M KKG PN
Sbjct: 310 -----RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSF 372
+ Y++LI + +++A+E+ +D+ ++ G+ +SS+Y +I C+ G+ A
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEI-KDLM-VSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 373 LVELVD-GGNVPREYTYRLVC 392
L E++ G NV + ++C
Sbjct: 423 LKEMLSIGFNVNQGSFTSVIC 443
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 14/240 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T +I LG G EA + +M + P + Y+ L+ L R A F+L+
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 354
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M GF PP+ Y LI S+ G L +A + LM+ KG
Sbjct: 355 EMTKKGF--PPNVIVYNNLIDSFIEAGSLN-----------KAIEIKDLMVSKGLSLTSS 401
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI G CK + A L ++M G N+ ++ S+I + D A+ + +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
N P T +I LC+ G+ ++A + ++ G V T + LC AG+
Sbjct: 462 LLRNMS-PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 99/259 (38%), Gaps = 30/259 (11%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T + L+K L +A M + P++ YN LI + G+ +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLY------------------ 261
+ M G TY LI YC++G + + L
Sbjct: 389 DLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 262 ------EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
A R ML + P LI G CK + +ALEL+ KG +
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLV 374
T ++L+ ++D A + +++ L G + SY +I C ++ EA+ FL
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEI--LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 375 ELVDGGNVPREYTYR-LVC 392
E+V G P YTY L+C
Sbjct: 565 EMVKRGLKPDNYTYSILIC 583
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P T IL++S R C +A ++ KG PDV + I+ C
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFD------------VVCKGVSPDVYLFTTAINAFC 271
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
K +++ A++LF M++ G APN VT++++I D A M + G+ P+
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM--VERGMEPT 329
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+Y+ ++ L A R+ +A+ L E+ G P Y + D AG
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 13/147 (8%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
H+ +AT T LIK + EA L F M+ P++ Y LI ++G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
+ + LL +M P+ TYT++I Y R G +T EA RL M K
Sbjct: 733 KVECLLREMHSKNVH--PNKITYTVMIGGYARDGNVT-----------EASRLLNEMREK 779
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALE 300
G VPD +TY I G K + A +
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
+LI YC GC Y A +F ++ KG P T N L+ + Q+
Sbjct: 193 LLIEVYCTQFKRDGC--------YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK 244
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
E F D+ KG +P+ + + I + +++ AV++ M+ P+ ++ +I
Sbjct: 245 CCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA-PNVVTFNTVI 302
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
L GR EA+ F ++V+ G P TY ++ L A
Sbjct: 303 DGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA------------------- 343
Query: 418 KRYKQTMMVKPVMTRKGYP 436
KR V MT+KG+P
Sbjct: 344 KRIGDAYFVLKEMTKKGFP 362
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+ T T L+ L E G EA + C D +YNTLI C A
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
L++M G PD +TY+ILI C ++ EA + + G +PD
Sbjct: 563 LDEMVKRGL--KPDNYTYSILI-----------CGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
V TY+ +IDGCCK R + E F++M K PN V Y+ LIR Y + + A+E+
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 339 DMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
DM+ + GI P+S++YT +I + RV EA E+ G P + Y + D
Sbjct: 670 DMK--HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 21/268 (7%)
Query: 110 VEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIK 169
V A+ G + TC + LVRAN ++ + T I
Sbjct: 216 VLANKGMFPSKTTCNILLTSLVRANE-------FQKCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 170 LLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWC 229
+ G EA F +M++ P++ +NT+I L G + A E+M G
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM-- 326
Query: 230 PPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGC 289
P TY+IL+ R +R+ +A + + M KGF P+V+ YN LID
Sbjct: 327 EPTLITYSILVKGLTRA-----------KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
+ + +A+E+ + M KG + TY++LI+ Y + D A +L++M + + +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV-N 434
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELV 377
S+T +I LC A F+ E++
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEML 462
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+T++T LIK + G A A M + ++ ++I LC F A
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
+ +M L P T LIS C+HG + +A L+ L KGFV D
Sbjct: 458 VGEMLLRNM--SPGGGLLTTLISGLCKHG-----------KHSKALELWFQFLNKGFVVD 504
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
T NAL+ G C+ ++ A + +++ +GC +RV+Y++LI ++D A L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 339 DMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+M + G+ P + +Y+ +I L +V EA F + G +P YTY ++ D C
Sbjct: 565 EM--VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 398 A 398
A
Sbjct: 623 A 623
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
E F M + +P+ YN LI A CR G + A L E M+ G P++ TYT
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI--SPNSATYTS 685
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI + R+ EA LF M +G P+V Y ALIDG K ++ +
Sbjct: 686 LIKGM-----------SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
L +M K PN++TY +I Y+ + A +L +M R +P S +Y I+
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM-REKGIVPDSITYKEFIY 793
Query: 359 ALCEAGRVAEAW 370
+ G V EA+
Sbjct: 794 GYLKQGGVLEAF 805
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD+ + T I A C+ G A L +ME G P+ T+ +I G
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV--APNVVTFNTVIDGLGMCG------ 309
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R EA M+ +G P ++TY+ L+ G + RI A + ++M KKG PN
Sbjct: 310 -----RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSF 372
+ Y++LI + +++A+E+ +D+ ++ G+ +SS+Y +I C+ G+ A
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEI-KDLM-VSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 373 LVELVD-GGNVPREYTYRLVC 392
L E++ G NV + ++C
Sbjct: 423 LKEMLSIGFNVNQGSFTSVIC 443
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 14/240 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T +I LG G EA + +M + P + Y+ L+ L R A F+L+
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 354
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M GF PP+ Y LI S+ G L +A + LM+ KG
Sbjct: 355 EMTKKGF--PPNVIVYNNLIDSFIEAGSLN-----------KAIEIKDLMVSKGLSLTSS 401
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI G CK + A L ++M G N+ ++ S+I + D A+ + +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
N P T +I LC+ G+ ++A + ++ G V T + LC AG+
Sbjct: 462 LLRNMS-PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 99/259 (38%), Gaps = 30/259 (11%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T + L+K L +A M + P++ YN LI + G+ +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLY------------------ 261
+ M G TY LI YC++G + + L
Sbjct: 389 DLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 262 ------EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
A R ML + P LI G CK + +ALEL+ KG +
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLV 374
T ++L+ ++D A + +++ L G + SY +I C ++ EA+ FL
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEI--LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 375 ELVDGGNVPREYTYR-LVC 392
E+V G P YTY L+C
Sbjct: 565 EMVKRGLKPDNYTYSILIC 583
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P T IL++S R C +A ++ KG PDV + I+ C
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFD------------VVCKGVSPDVYLFTTAINAFC 271
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
K +++ A++LF M++ G APN VT++++I D A M + G+ P+
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM--VERGMEPT 329
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+Y+ ++ L A R+ +A+ L E+ G P Y + D AG
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 13/147 (8%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
H+ +AT T LIK + EA L F M+ P++ Y LI ++G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
+ + LL +M P+ TYT++I Y R G +T EA RL M K
Sbjct: 733 KVECLLREMHSKNVH--PNKITYTVMIGGYARDGNVT-----------EASRLLNEMREK 779
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALE 300
G VPD +TY I G K + A +
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
+LI YC GC Y A +F ++ KG P T N L+ + Q+
Sbjct: 193 LLIEVYCTQFKRDGC--------YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK 244
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
E F D+ KG +P+ + + I + +++ AV++ M+ P+ ++ +I
Sbjct: 245 CCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA-PNVVTFNTVI 302
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
L GR EA+ F ++V+ G P TY ++ L A
Sbjct: 303 DGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA------------------- 343
Query: 418 KRYKQTMMVKPVMTRKGYP 436
KR V MT+KG+P
Sbjct: 344 KRIGDAYFVLKEMTKKGFP 362
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 17/254 (6%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T L+ L +Q L F +M + +I YN L++A + G+ +A+ LL +ME
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G + PD FTY LIS YC+ + +EA + M G P++VTYN+
Sbjct: 232 KGVF--PDIFTYNTLISVYCKKSMH-----------FEALSVQDRMERSGVAPNIVTYNS 278
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
I G + R++ A LF ++K A N VTY +LI Y N+ID A+ LR++
Sbjct: 279 FIHGFSREGRMREATRLFREIKDDVTA-NHVTYTTLIDGYCRMNDIDEALR-LREVMESR 336
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLL 404
P +Y I+ LCE GR+ EA L E+ P T + + C ED +
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI-EDMVS 395
Query: 405 GDEVHER-IKNGMR 417
+V ++ I++G++
Sbjct: 396 AVKVKKKMIESGLK 409
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 14/209 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T +++ L E G EA+ M PD NTLI A C++ + A + +
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKK 401
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M G D ++Y LI +C+ L ++ LF M+ KGF P
Sbjct: 402 KMIESGL--KLDMYSYKALIHGFCKVLELENAKE----------ELFS-MIEKGFSPGYA 448
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY+ L+DG + +L E+ +K+G + Y LIR ++D A + M
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
++ + S +T + +A G+V EA
Sbjct: 509 EK-KGLVGDSVIFTTMAYAYWRTGKVTEA 536
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 36/315 (11%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
S FF W ++ H + +M +L + KT L + A + ++P+
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQREL---LSSPLVLR 119
Query: 163 TI---------------TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALC 207
++ + L+ + G+ +++ + F +++ +P ++A L+ +L
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 208 RVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLF 267
+ + ++M G + Y +L+ + C K+ +A +L
Sbjct: 180 KQRLTDTVWKIFKKMVKLG--VVANIHVYNVLVHA---------CSKSGDPE--KAEKLL 226
Query: 268 RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
M KG PD+ TYN LI CK AL + + M++ G APN VTY+S I +S
Sbjct: 227 SEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSRE 286
Query: 328 NEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
+ A + R+++ + + +YT +I C + EA + G P T
Sbjct: 287 GRMREATRLFREIK--DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 388 YRLVCDKLCLAGEDG 402
Y + KLC EDG
Sbjct: 345 YNSILRKLC---EDG 356
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P + YN+++ LC G A LL +M G PD T LI++YC+ +
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEM--SGKKIEPDNITCNTLINAYCKIEDMVSAV 397
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
K ++ M+ G D+ +Y ALI G CK ++ A E M +KG +P
Sbjct: 398 KVKKK-----------MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS-YTPIIHALCEAGRVAEA 369
TY L+ + N+ D ++L + ++ G+ + + Y +I +C+ +V A
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEK--RGLCADVALYRGLIRRICKLEQVDYA 501
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 161/396 (40%), Gaps = 63/396 (15%)
Query: 59 GFRHRTPLRQRNLNDEHRKLHDGLL-LLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFT 117
GF ++ L + N++ + + L+ +L ++ + R + + +FF W F
Sbjct: 93 GFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRC---AKLAYKFFVWCGGQENFR 149
Query: 118 HDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLA 177
H + + K + + E + P T T LI GE GLA
Sbjct: 150 HTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGY------PTTACTFNLLICTCGEAGLA 203
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+ F + K ++ RP +YN ++++L V + ++ EQM GF PD TY
Sbjct: 204 RDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGF--TPDVLTYN 261
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN-------------- 283
I++ + R G RLY RL M+ GF PD+ TYN
Sbjct: 262 IVMFANFRLG--------KTDRLY---RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA 310
Query: 284 ---------------------ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
LIDG + +++ ++ K GC P+ V Y +I
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 323 YYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNV 382
Y + E+++A E+ ++M +P+ +Y +I C AG+ EA + L E+ G
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQ-LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 383 PREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRK 418
P Y + + L AG+ +L E HE +K+ + K
Sbjct: 430 PNFVVYSTLVNNLKNAGK--VL--EAHEVVKDMVEK 461
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
M++ P + + TLI L R G K+ +++ G C PD YT++I+ Y
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG--CTPDVVCYTVMITGYISG 375
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
G L +A +F+ M KG +P+V TYN++I G C + + A L ++M+
Sbjct: 376 G-----------ELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
+GC PN V Y +L+ ++ A EV++DM H
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 15/227 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN-FARAKFLLEQ 221
+ T LI G EA F +M++ C+P + YN ++ ++G + + L+E+
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M+ G PDA+TY LI T C++ + + EA ++F M GF D VT
Sbjct: 270 MKSDGI--APDAYTYNTLI---------TCCKRGSLHQ--EAAQVFEEMKAAGFSYDKVT 316
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YNAL+D K++R + A+++ +M G +P+ VTY+SLI Y+ +D A+E+ M
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
P +YT ++ AG+V A S E+ + G P T+
Sbjct: 377 EKGTK-PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 13/242 (5%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+ + + +I +LG++G S A+ F +++ D+ +Y +LI A G + A +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
++ME G C P TY ++++ + + G T K T L M G PD
Sbjct: 231 FKKMEEDG--CKPTLITYNVILNVFGKMG--TPWNKITS--------LVEKMKSDGIAPD 278
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
TYN LI C + Q A ++FE+MK G + ++VTY++L+ Y ++ A++VL
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+M LN PS +Y +I A G + EA ++ + G P +TY + A
Sbjct: 339 EMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 399 GE 400
G+
Sbjct: 398 GK 399
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 37/300 (12%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G + D VT + V + + G KE R T LI
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE------TFNTLISAYSRC 502
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
G +A + RM PD+ YNT++ AL R G + +++ +L +ME C P+
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME--DGRCKPNEL 560
Query: 235 TYTILISSYCRHGILTGCRKATRRRLY-------------------------EAGRLFRL 269
TY L+ +Y +G G + +Y EA R F
Sbjct: 561 TYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 270 MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNE 329
+ +GF PD+ T N+++ + + +A + + MK++G P+ TY+SL+ +S + +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 330 IDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
++ E+LR++ L GI P SY +I+A C R+ +A E+ + G VP TY
Sbjct: 680 FGKSEEILREI--LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T+ ++ + G + + ++A+ MK+ P + YN+L+Y R +F +++ +L ++
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G PD +Y +I +YCR+ R+ +A R+F M G VPDV+TY
Sbjct: 691 LAKGI--KPDIISYNTVIYAYCRN-----------TRMRDASRIFSEMRNSGIVPDVITY 737
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N I + A+ + M K GC PN+ TY+S++ Y N D A + D++
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Query: 343 LNHGIP 348
L+ P
Sbjct: 798 LDPHAP 803
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 104/272 (38%), Gaps = 49/272 (18%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI L EA+ F MK D YN L+ + A +L +M
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
L GF P TY LIS+Y R G+L EA L M KG PDV TY
Sbjct: 341 VLNGF--SPSIVTYNSLISAYARDGMLD-----------EAMELKNQMAEKGTKPDVFTY 387
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS----------------- 325
L+ G + +++ A+ +FE+M+ GC PN T+++ I+ Y
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 326 -----------------ATNEIDRAVE-VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
N +D V V ++M+R +P ++ +I A G
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF-VPERETFNTLISAYSRCGSFE 506
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+A + ++D G P TY V L G
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 37/338 (10%)
Query: 101 RKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
+++ + F ++A +GF++D+VT + V +++ K L E + +
Sbjct: 296 QEAAQVFEEMKA-AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP------S 348
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T LI G+ EA +M + +PD+ Y TL+ R G A + E
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRK--------------ATRRRLY----- 261
+M G C P+ T+ I Y G T K T L
Sbjct: 409 EMRNAG--CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 262 -----EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
E +F+ M GFVP+ T+N LI + ++A+ ++ M G P+ T
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y++++ + +++ +VL +M+ P+ +Y ++HA + S E+
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMED-GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 377 VDGGNVPREY---TYRLVCDKLCLAGEDGLLGDEVHER 411
G PR T LVC K L E E+ ER
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 38/233 (16%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P+ +N L C NF LE+ME GF PD TY L+SSYCR G
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGF--EPDLVTYNTLVSSYCRRG------ 285
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
RL EA L+++M + VPD+VTY +LI G CK R++ A + F M +G P+
Sbjct: 286 -----RLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
++Y++LI Y + ++ ++L +M N +P + I+ GR+ A +F+
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLG-NSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 374 VEL----VDGGNVPREYTYRLVCD----KLCLAGE--------DGLLGDEVHE 410
VEL VD +P E VCD LC G+ D ++ +E HE
Sbjct: 400 VELRRLKVD---IPFE-----VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHE 444
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 114/300 (38%), Gaps = 66/300 (22%)
Query: 170 LLGEQGLASEASLTFYRMKQYHC--RPDIRAYNTLIYALCRVGNFARA-KFLLEQMELPG 226
LL Q AS A +TF++ ++ RP++ Y L++ L F A +FL E +EL
Sbjct: 86 LLRFQSDASRA-ITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTS 144
Query: 227 F---------------WCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLML 271
C D + +L+ Y + G++ E R+FR +L
Sbjct: 145 KKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVE-----------EGFRVFREVL 193
Query: 272 FKGFV-----------------------------------PDVVTYNALIDGCCKTYRIQ 296
GF P+ T+N L + C +
Sbjct: 194 DSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFR 253
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPI 356
+ E M+++G P+ VTY++L+ Y + A + + M R +P +YT +
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR-RRVVPDLVTYTSL 312
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGM 416
I LC+ GRV EA +VD G P +Y + C G +HE + N +
Sbjct: 313 IKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI+ L EA + ++K + D + Y LI LCR+G A+ L+ +M
Sbjct: 453 LIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF--D 510
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRL--MLFKGFVPDVVTYNA 284
PD+F L+ YC+ +A RL L M F+ F P+ +YN+
Sbjct: 511 SEVKPDSFICGALVYGYCKE-----------LDFDKAERLLSLFAMEFRIFDPE--SYNS 557
Query: 285 LIDGCCKT-YRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
L+ C+T ++ALEL E M++ G PNR+T LI+
Sbjct: 558 LVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQ 596
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LI+ L + + A F +M RP++ YN L+ LC +G + A +LL
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M P+ T+T LI ++ + G +L EA L+ +M+ PDV
Sbjct: 248 DMMKRRI--EPNVITFTALIDAFVKVG-----------KLMEAKELYNVMIQMSVYPDVF 294
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY +LI+G C + A ++F M++ GC PN V Y +LI + + ++ +++ +M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ + ++ +YT +I C GR A ++ P TY ++ D LC G+
Sbjct: 355 SQ-KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 401 DGLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPEIEPV 441
E I MRKR +V + +G ++ V
Sbjct: 414 -----VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 110/258 (42%), Gaps = 27/258 (10%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T LI + G EA + M Q PD+ Y +LI LC G A+ + M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
E G C P+ YT LI +C+ +R+ + ++F M KG V + +TY
Sbjct: 320 ERNG--CYPNEVIYTTLIHGFCKS-----------KRVEDGMKIFYEMSQKGVVANTITY 366
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
LI G C R A E+F M + P+ TY+ L+ ++++A+ + M++
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG--- 399
I + +YT II +C+ G+V +A+ L G P TY + C G
Sbjct: 427 REMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 400 ----------EDGLLGDE 407
EDG L +E
Sbjct: 486 EADSLFKKMKEDGFLPNE 503
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 16/224 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI L GL EA FY M++ C P+ Y TLI+ C+ + +M G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
+ TYT+LI YC G R A +F M + PD+ TYN L+
Sbjct: 359 V--VANTITYTVLIQGYCLVG-----------RPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
DG C ++++AL +FE M+K+ N VTY +I+ +++ A ++ + + G
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL--FSKG 463
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
+ P+ +YT +I C G + EA S ++ + G +P E Y+
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F +M+ P + N +++ +C RA L +M GF PD T+T L++ Y
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF--EPDLVTFTSLLNGY 163
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C R+ +A LF +L GF P+VVTY LI CK + A+ELF
Sbjct: 164 CHWN-----------RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFN 212
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M G PN VTY++L+ A +LRDM + P+ ++T +I A +
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK-RRIEPNVITFTALIDAFVKV 271
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
G++ EA ++ P +TY + + LC+ G
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F RM P I + L+ + ++ + L EQM++ G PP T I++
Sbjct: 71 FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI--PPLLCTCNIVMHCV 128
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C CR + G++ +L GF PD+VT+ +L++G C RI+ A+ LF+
Sbjct: 129 CLSS--QPCRASCF-----LGKMMKL----GFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
+ G PN VTY +LIR ++ AVE+ M N P+ +Y ++ LCE
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT-NGSRPNVVTYNALVTGLCEI 236
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
GR +A L +++ P T+ + D G+
Sbjct: 237 GRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 266 LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
LF M G P + T N ++ C + + RA M K G P+ VT+ SL+ Y
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 326 ATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
N I+ A+ + Q L G P+ +YT +I LC+ + A ++ G+ P
Sbjct: 165 HWNRIEDAIALFD--QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 385 EYTYRLVCDKLCLAGEDG----LLGDEVHERIK 413
TY + LC G G LL D + RI+
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 117/273 (42%), Gaps = 47/273 (17%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
AT T ++++ +G EA F+RM + PD AY TLI A C+ L +
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 221 QMELPG---------------FWC------------------PPDAFTYTILISSYCRHG 247
M+ F C PD TY +I YC
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC--- 647
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
+ RRL EA R+F L+ F P+ VT LI CK + A+ +F M +
Sbjct: 648 --------SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRV 366
KG PN VTY L+ ++S + +I+ + ++ +MQ GI PS SY+ II LC+ GRV
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE--KGISPSIVSYSIIIDGLCKRGRV 757
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
EA + + +D +P Y ++ C G
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 16/244 (6%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
H+ + + I + + G + AS+ + RM P++ Y LI LC+ G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
A + Q+ G P TY+ LI +C+ G L L+ M+
Sbjct: 409 EAFGMYGQILKRGM--EPSIVTYSSLIDGFCKCG-----------NLRSGFALYEDMIKM 455
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G+ PDVV Y L+DG K + A+ M + N V ++SLI + N D A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 334 VEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
++V R M +GI P +++T ++ GR+ EA + G P Y +
Sbjct: 516 LKVFRLMGI--YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 393 DKLC 396
D C
Sbjct: 574 DAFC 577
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P++ + TLI C+ G RA L + ME G PD Y+ LI Y + G+L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI--EPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 254 KATRRRLYEAGRL------------------------FRLMLFKGFVPDVVTYNALIDGC 289
K + L++ +L ++ ML +G P+VVTY LI G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
C+ RI A ++ + K+G P+ VTY SLI + + + DM ++ + P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PD 460
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELV 377
Y ++ L + G + A F V+++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P+ T+ LI+ +C+ G + A LF++M +G PD++ Y+ LIDG
Sbjct: 284 PNVVTFCTLINGFCKRG-----------EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
K + +LF KG + V + S I Y + ++ A V + M L GI P+
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM--LCQGISPN 390
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+YT +I LC+ GR+ EA+ +++ G P TY + D C G
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA F M Y +PD+ + T++ G A FL +M G PDA Y
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL--EPDALAYCT 571
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI ++C+H K T +LF LM D+ N +I K +RI+ A
Sbjct: 572 LIDAFCKH------MKPTI-----GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+ F ++ + P+ VTY+++I Y + +D A + ++ G P++ + T +IH
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG-PNTVTLTILIH 679
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
LC+ + A + + G+ P TY + D
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T+T LI +L + A F M + +P+ Y L+ + + + L
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E+M+ G P +Y+I+I C+ G R+ EA +F + +PDV
Sbjct: 730 EEMQEKGI--SPSIVSYSIIIDGLCKRG-----------RVDEATNIFHQAIDAKLLPDV 776
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
V Y LI G CK R+ A L+E M + G P+ + +L Y
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 820
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 60 FRHRTPLRQRNLNDEHRKLHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHD 119
F R P + LN+ +L GL+ R +LG R FF W + H
Sbjct: 93 FHSRVPKLELALNESGVELRPGLI--ERVLNRCGDAGNLGYR----FFVWAAKQPRYCHS 146
Query: 120 EVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNP--ITTATITCLIKLLGEQGLA 177
+ M +L + +WG ++E + NP I L++ +
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEM-------RKENPQLIEPELFVVLVQRFASADMV 199
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+A M ++ PD + L+ ALC+ G+ A L E M + P + +T
Sbjct: 200 KKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR---FPVNLRYFT 256
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
L+ +CR G ++ EA + M GF PD+V Y L+ G ++
Sbjct: 257 SLLYGWCRVG-----------KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
A +L DM+++G PN Y LI+ + ++ A++V +M+R +YT ++
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE-ADVVTYTALV 364
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
C+ G++ + + L +++ G +P E TY
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTY 395
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 14/216 (6%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T L+ G ++A M++ P+ Y LI ALC+V A + +ME
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME- 349
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
+ C D TYT L+S +C+ G + C M+ KG +P +TY
Sbjct: 350 -RYECEADVVTYTALVSGFCKWGKIDKCYIVLDD-----------MIKKGLMPSELTYMH 397
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
++ K + LEL E M++ P+ Y+ +IR E+ AV + +M+ N
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE-N 456
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
P ++ +I+ L G + EA E+V G
Sbjct: 457 GLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 116/302 (38%), Gaps = 55/302 (18%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LI+ L + EA F M++Y C D+ Y L+ C+ G + +L+ M
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G P TY ++ ++ + C + L E R + PD+ YN
Sbjct: 386 KGLM--PSELTYMHIMVAHEKKESFEECLE-----LMEKMRQIE------YHPDIGIYNV 432
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
+I CK ++ A+ L+ +M++ G +P T+ +I ++ + A + ++M +
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM--VT 490
Query: 345 HGIPSSSSY---------------------------------------TPIIHALCEAGR 365
G+ S S Y T IHAL G
Sbjct: 491 RGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGY 550
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMM 425
EA S+ +E+++ +P+ T+ + L G E+ E+++N +R M
Sbjct: 551 EKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAG-EITEKVRNMAAEREMSFKM 609
Query: 426 VK 427
K
Sbjct: 610 YK 611
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 16/237 (6%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LI L + L A RMK P++ Y++LI LC+ G A A+ L +M+
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 111
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
P+ T++ LI +Y + G +L + ++++M+ P+V TY++
Sbjct: 112 KKI--NPNVITFSALIDAYAKRG-----------KLSKVDSVYKMMIQMSIDPNVFTYSS 158
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
LI G C R+ A+++ + M KGC PN VTY +L + ++ +D +++L DM +
Sbjct: 159 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ-- 216
Query: 345 HGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
G+ +++ S +I +AG++ A + G +P +Y +V L GE
Sbjct: 217 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 17/229 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M + PDI ++L+ C + A ++ QME G D TILI + C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGI--KRDVVVDTILIDTLCK 60
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
+ R + A + + M +G P+VVTY++LI G CK+ R+ A +M
Sbjct: 61 N-----------RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 109
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
K PN +T+ +LI Y+ ++ + V + M +++ P+ +Y+ +I+ LC R
Sbjct: 110 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSID-PNVFTYSSLIYGLCMHNR 168
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG--EDGL-LGDEVHER 411
V EA L ++ G P TY + + + +DG+ L D++ +R
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 152 NNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN 211
++ + NP T + LI ++G S+ + M Q P++ Y++LIY LC
Sbjct: 110 DSKKINP-NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 168
Query: 212 FARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLML 271
A +L+ M G C P+ TY+ L + + + R+ + +L M
Sbjct: 169 VDEAIKMLDLMISKG--CTPNVVTYSTLANGFFKSS-----------RVDDGIKLLDDMP 215
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
+G + V+ N LI G + +I AL +F M G PN +Y+ ++ A E++
Sbjct: 216 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 275
Query: 332 RAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+A+ MQ+ + + +YT +IH +C+A V EA+ +L
Sbjct: 276 KALSRFEHMQKTRNDL-DIITYTIMIHGMCKACMVKEAYDLFYKL 319
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 14/276 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T++ L+K +G +A + +M + + +P++ AYNTL+ C GN +A +
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
ME G C P+ TY LI+ + + G L G A ++ ML G P+VV
Sbjct: 378 MEEIG--CSPNIRTYGSLINGFAKRGSLDG-----------AVYIWNKMLTSGCCPNVVV 424
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y +++ C+ + + A L E M K+ CAP+ T+++ I+ +D A +V R M+
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGED 401
+ + P+ +Y ++ L +A R+ EA+ E+ G TY + C AG
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 402 GLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPE 437
G+ V + + +G M+ ++G E
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAE 580
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 136/340 (40%), Gaps = 62/340 (18%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
+L FF+ + + F H +T M L ++ L++ K H + + +
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM--KLQGFHCSEDLFIS 116
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIR------------------------- 197
I+ + + GLA A FYR+K++ C P ++
Sbjct: 117 VIS----VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 172
Query: 198 ----------AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG 247
YN L+ ALC+ AK LL +M G C PDA +YT +ISS C G
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG--CCPDAVSYTTVISSMCEVG 230
Query: 248 ILTGCRKATRR-----RLYE--------------AGRLFRLMLFKGFVPDVVTYNALIDG 288
++ R+ R +Y A L R M+ KG P+V++Y+ LI+
Sbjct: 231 LVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 289 CCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP 348
C + +I+ A M K+GC PN T SL++ A+++ M R P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 349 SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ +Y ++ C G + +A S + + G P TY
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTY 390
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 33/259 (12%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILT-------- 250
+ +I L G ++LL+QM+L GF C D F +IS Y + G+
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS--VISVYRQVGLAERAVEMFYR 136
Query: 251 ----GCRKATR------------RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
GC + + R+ ++R M GF P+V TYN L+ CK +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 354
+ A +L +M KGC P+ V+Y ++I + E+ + P S Y
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE------PVVSVYN 250
Query: 355 PIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKN 414
+I+ LC+ A+ + E+V+ G P +Y + + LC +G+ L + + +K
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 415 GMRKR-YKQTMMVKPVMTR 432
G Y + +VK R
Sbjct: 311 GCHPNIYTLSSLVKGCFLR 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T +++ L EA M + +C P + +N I LC G A+ + QME
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME- 484
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
CPP+ TY + +L G KA R + EA L R + +G TYN
Sbjct: 485 QQHRCPPNIVTY---------NELLDGLAKANR--IEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
L+ G C AL+L M G +P+ +T + +I Y + +RA ++L D+
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCG 592
Query: 345 HGI--PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
P SYT +I LC + + L ++ G VP T+ ++ +
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR 258
YNTL++ C G A L+ +M + G PD T ++I +YC+ G R A
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGK--SPDEITMNMIILAYCKQG--KAERAAQML 586
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
L GR + + PDV++Y +I G C++ + + L E M G P+ T+
Sbjct: 587 DLVSCGR-------RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 319 SLIRYYSATNEIDRA 333
LI + ++I RA
Sbjct: 640 VLINCF-ILDDIVRA 653
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 30/305 (9%)
Query: 102 KSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITT 161
++LEF+R+ A GF H + M +L R +W L ET K + I+
Sbjct: 90 QTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRS-----LISP 144
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDI---RAYNTLIYALCRVGNFARAKFL 218
T+ ++ + + + +F++ K+ PD +N L+ LC+ + A+ +
Sbjct: 145 RTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEKSMTDARNV 202
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
++ PD T+ IL+S + + EA F M KG PD
Sbjct: 203 YHSLK---HQFQPDLQTFNILLSGW--------------KSSEEAEAFFEEMKGKGLKPD 245
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
VVTYN+LID CK I++A +L + M+++ P+ +TY ++I + D+A EVL+
Sbjct: 246 VVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLK 305
Query: 339 DMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+M+ +G P ++Y I C A R+ +A + E+V G P TY L L L
Sbjct: 306 EMK--EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSL 363
Query: 398 AGEDG 402
A + G
Sbjct: 364 ANDLG 368
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M++ PD+ Y T+I L +G +A+ +L++M+ G C PD Y I ++C
Sbjct: 271 KMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG--CYPDVAAYNAAIRNFC- 327
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
RRL +A +L M+ KG P+ TYN + R+ EL+ M
Sbjct: 328 ----------IARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRM 377
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
C PN + LI+ + ++D A+ + DM G S S + A +
Sbjct: 378 LGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLA-K 436
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIK 413
V EA L+E+V+ G+ P +++ + + LA + DEV+ I+
Sbjct: 437 VEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKH----DEVNNLIQ 480
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
MK +PD+ YN+LI C+ +A L+++M PD TYT +I
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEE--ETPDVITYTTVIGGLG-- 292
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
L G R L E M G PDV YNA I C R+ A +L ++M
Sbjct: 293 --LIGQPDKAREVLKE-------MKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMV 343
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
KKG +PN TY+ R S N++ R+ E+ M N +P++ S +I +V
Sbjct: 344 KKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLG-NECLPNTQSCMFLIKMFKRHEKV 402
Query: 367 AEAWSFLVELVDGG 380
A ++V G
Sbjct: 403 DMAMRLWEDMVVKG 416
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 23/254 (9%)
Query: 143 LKETAN-----KHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIR 197
L+E +N H N+ + A I LI+ EAS M + CRP +
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIR----DSRLGEASFFLREMGKNGCRPTVV 500
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
+YN LI LC+ G F A +++M L W PD TY+IL+ CR
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEM-LENGW-KPDLKTYSILLCGLCRD----------- 547
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
R++ A L+ L G DV+ +N LI G C ++ A+ + +M+ + C N VTY
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
++L+ + + +RA + M ++ P SY I+ LC V+ A F +
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQ-PDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 378 DGGNVPREYTYRLV 391
+ G P YT+ ++
Sbjct: 667 NHGIFPTVYTWNIL 680
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 16/235 (6%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQ-YHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
+IK G+ + +A F RM++ + C P IR+YNTL+ A + + + L E
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK-GFVPDVVTYNA 284
G P+ TY +LI C+ ++ +E R F ++K GF PDV +Y+
Sbjct: 144 GV--APNLQTYNVLIKMSCK------------KKEFEKARGFLDWMWKEGFKPDVFSYST 189
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
+I+ K ++ ALELF++M ++G AP+ Y+ LI + + A+E+ + +
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
P+ ++ +I L + GRV + + YTY + LC AG
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 36/307 (11%)
Query: 139 LWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRA 198
LW L E ++ + N +N + + C G + + RMKQ D+
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKC--------GRVDDCLKIWERMKQNEREKDLYT 292
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR- 257
Y++LI+ LC GN +A+ + EL D TY ++ +CR G + + R
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFN--ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 258 ----------------------RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRI 295
++ EA ++RLM KG+ D TY I G C +
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSY-T 354
+AL + ++++ G + Y S+I ++ A ++++M + HG+ +S
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK--HGVELNSHVCN 468
Query: 355 PIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKN 414
+I L R+ EA FL E+ G P +Y ++ LC AG+ G V E ++N
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 415 GMRKRYK 421
G + K
Sbjct: 529 GWKPDLK 535
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 20/234 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I L ++ EAS M ++ + N LI L R A F L +M G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C P +Y ILI C+ G + EA + ML G+ PD+ TY+ L+
Sbjct: 495 --CRPTVVSYNILICGLCKAG-----------KFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
G C+ +I ALEL+ + G + + ++ LI + ++D A+ V+ +M+ N
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN-C 600
Query: 347 IPSSSSYTPIIHALCEAG---RVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+ +Y ++ + G R W ++ ++ G P +Y + LC+
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM---GLQPDIISYNTIMKGLCM 651
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 29/261 (11%)
Query: 141 GFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYN 200
G +KE+ N + + LIK L E G EA++ + M D Y
Sbjct: 339 GKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 201 TLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR--------------- 245
I+ LC G +A +++++E G D + Y +I C+
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSG--GHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 246 -HGILTGCRKAT--------RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
HG+ RL EA R M G P VV+YN LI G CK +
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS-YTP 355
A ++M + G P+ TY L+ +ID A+E+ Q L G+ + +
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH--QFLQSGLETDVMMHNI 574
Query: 356 IIHALCEAGRVAEAWSFLVEL 376
+IH LC G++ +A + + +
Sbjct: 575 LIHGLCSVGKLDDAMTVMANM 595
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+PD+ +Y+T+I L + G A L ++M G PD Y ILI G L
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV--APDVTCYNILID-----GFLKEK 233
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
T L++ RL+ P+V T+N +I G K R+ L+++E MK+
Sbjct: 234 DHKTAMELWD-----RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
+ TY SLI +D+A V ++ I +Y ++ C G++ E+
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI-DVVTYNTMLGGFCRCGKIKES 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 14/235 (5%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
+ +I L + G +A F M + PD+ YN LI + + A L +++ L
Sbjct: 188 STVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL-L 246
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
P+ T+ I+IS + G + C K R M D+ TY++
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWER-----------MKQNEREKDLYTYSS 295
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
LI G C + +A +F ++ ++ + + VTY++++ + +I ++E+ R M+ N
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ SY +I L E G++ EA + G + TY + LC+ G
Sbjct: 356 S--VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
+++ Q D+ +N LI+ LC VG A ++ ME C + TY L+ +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN--CTANLVTYNTLMEGF 614
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
+ G + R G ++++ G PD+++YN ++ G C + A+E F+
Sbjct: 615 FKVG-------DSNRATVIWGYMYKM----GLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 304 DMKKKGCAPNRVTYDSLIR 322
D + G P T++ L+R
Sbjct: 664 DARNHGIFPTVYTWNILVR 682
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 13/237 (5%)
Query: 164 ITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME 223
+ +I L ++G +E F M + +P++ Y LI + G+ A LL +M
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 224 LPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
GF PD TY+++++ C++G R+ EA F F G + + Y+
Sbjct: 390 DEGF--KPDVVTYSVVVNGLCKNG-----------RVEEALDYFHTCRFDGLAINSMFYS 436
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+LIDG K R+ A LFE+M +KGC + Y++LI ++ ++D A+ + + M+
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ +YT ++ + + R EA ++D G P +R + LCL+G+
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 119/293 (40%), Gaps = 35/293 (11%)
Query: 106 FFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATIT 165
FF W +TH+ + VL A + F+ K P+T +
Sbjct: 138 FFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI-RFVSSEIKKFEF-----PMTVSAAN 191
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
LIK G+ G+ E + +MK+ P + YN L+ L A+ + E ME
Sbjct: 192 ALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATR---RRLYEAGR----------------- 265
PD TY +I YC+ G + R R +EA +
Sbjct: 252 RI--KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 266 ----LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
L++ M KG ++ +I G CK ++ +FE+M +KG PN Y LI
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFL 373
Y+ + ++ A+ +L M ++ G P +Y+ +++ LC+ GRV EA +
Sbjct: 370 DGYAKSGSVEDAIRLLHRM--IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 161 TATITCLIKLLGEQGLASEAS---LTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
T + C + L+ LA + +K++ + A N LI + ++G +
Sbjct: 149 THNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLW 208
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
+ +M+ G P +TY L+ +G+++ + R++E R+ P
Sbjct: 209 VWRKMKENGI--EPTLYTYNFLM-----NGLVSAMFVDSAERVFEVMESGRIK------P 255
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
D+VTYN +I G CK + Q+A+E DM+ +G +++TY ++I+ A ++ V +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 338 RDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
++M +P +++ +I LC+ G++ E ++ ++ G+ P Y ++ D
Sbjct: 316 QEMDEKGIQVP-PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 398 AG--EDGL 403
+G ED +
Sbjct: 375 SGSVEDAI 382
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 103/269 (38%), Gaps = 49/269 (18%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG--------- 210
T T L+ L A F M+ +PDI YNT+I C+ G
Sbjct: 221 TLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKL 280
Query: 211 --------------------------NFARAKFLLEQMELPGFWCPPDAFTYTILISSYC 244
+F L ++M+ G PP AF+ ++I C
Sbjct: 281 RDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS--LVIGGLC 338
Query: 245 RHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFED 304
+ G +L E +F M+ KG P+V Y LIDG K+ ++ A+ L
Sbjct: 339 KEG-----------KLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 305 MKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAG 364
M +G P+ VTY ++ ++ A++ R + +S Y+ +I L +AG
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAINSMFYSSLIDGLGKAG 446
Query: 365 RVAEAWSFLVELVDGGNVPREYTYRLVCD 393
RV EA E+ + G Y Y + D
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALID 475
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYA-----LCRVGNFARA 215
T + ++ L + G EA L ++ + CR D A N++ Y+ L + G A
Sbjct: 397 VVTYSVVVNGLCKNGRVEEA-LDYF----HTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLF-RLMLFKG 274
+ L E+M G C D++ Y LI ++ +H R++ EA LF R+ +G
Sbjct: 452 ERLFEEMSEKG--CTRDSYCYNALIDAFTKH-----------RKVDEAIALFKRMEEEEG 498
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
V TY L+ G K +R + AL+L++ M KG P + +L + ++ RA
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARAC 558
Query: 335 EVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
++L ++ + G+ ++ +I+ LC+AGR+ EA +L DG
Sbjct: 559 KILDELAPM--GVILDAACEDMINTLCKAGRIKEA----CKLADG 597
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 14/215 (6%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I + + LI LG+ G EA F M + C D YN LI A + A L
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
++ME C +TYTIL+S + R EA +L+ +M+ KG P
Sbjct: 490 FKRMEEEE-GCDQTVYTYTILLSGMFKE-----------HRNEEALKLWDMMIDKGITPT 537
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+ AL G C + ++ RA ++ +++ G + D +I I A ++
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLAD 596
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
+ +P T +I+AL + G+ A +
Sbjct: 597 GITERGREVPGRIR-TVMINALRKVGKADLAMKLM 630
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 19/242 (7%)
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
P + + LLG+ + + +L FYR M++ P+ N ++ CR G +
Sbjct: 201 PTVESCNAYMSSLLGQGRV--DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI 258
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
LL+ ME GF +Y LI+ +C G+L+ A +L +M G
Sbjct: 259 ELLQDMERLGFRATD--VSYNTLIAGHCEKGLLSS-----------ALKLKNMMGKSGLQ 305
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
P+VVT+N LI G C+ ++Q A ++F +MK APN VTY++LI YS + + A
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 337 LRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
DM + +GI +Y +I LC+ + +A F+ EL VP T+ +
Sbjct: 366 YEDM--VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 396 CL 397
C+
Sbjct: 424 CV 425
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 16/252 (6%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T + LI E+GL S A M + +P++ +NTLI+ CR A +
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE-AGRLFRLMLFKGFVPD 278
+M+ P+ TY LI+ Y + G +E A R + M+ G D
Sbjct: 332 GEMK--AVNVAPNTVTYNTLINGYSQQGD------------HEMAFRFYEDMVCNGIQRD 377
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
++TYNALI G CK + ++A + +++ K+ PN T+ +LI DR E+ +
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
M R + P+ ++ ++ A C A L E+V T VC+ L
Sbjct: 438 SMIR-SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 399 GEDGLLGDEVHE 410
G+D L+ + E
Sbjct: 497 GKDQLVKKLLQE 508
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 124/316 (39%), Gaps = 37/316 (11%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
SLEFF W + + +H T + L + K+ L++ +
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDV------------LVNG 145
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
+ K+ +A L YR C R +++L + F A QM
Sbjct: 146 GVDLPAKVF-------DALLYSYR----ECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM 194
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ GF P + +SS G R+ A R +R M P+ T
Sbjct: 195 KDYGFL--PTVESCNAYMSSLLGQG-----------RVDIALRFYREMRRCKISPNPYTL 241
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N ++ G C++ ++ + +EL +DM++ G V+Y++LI + + A++ L++M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK-LKNMMG 300
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
+ P+ ++ +IH C A ++ EA E+ P TY + + G+
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 403 LLGDEVHERIKNGMRK 418
+ + + NG+++
Sbjct: 361 MAFRFYEDMVCNGIQR 376
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 19/242 (7%)
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
P + + LLG+ + + +L FYR M++ P+ N ++ CR G +
Sbjct: 201 PTVESCNAYMSSLLGQGRV--DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI 258
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
LL+ ME GF +Y LI+ +C G+L+ A +L +M G
Sbjct: 259 ELLQDMERLGFRATD--VSYNTLIAGHCEKGLLSS-----------ALKLKNMMGKSGLQ 305
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
P+VVT+N LI G C+ ++Q A ++F +MK APN VTY++LI YS + + A
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 337 LRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
DM + +GI +Y +I LC+ + +A F+ EL VP T+ +
Sbjct: 366 YEDM--VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 396 CL 397
C+
Sbjct: 424 CV 425
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 16/252 (6%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T + LI E+GL S A M + +P++ +NTLI+ CR A +
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE-AGRLFRLMLFKGFVPD 278
+M+ P+ TY LI+ Y + G +E A R + M+ G D
Sbjct: 332 GEMK--AVNVAPNTVTYNTLINGYSQQGD------------HEMAFRFYEDMVCNGIQRD 377
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
++TYNALI G CK + ++A + +++ K+ PN T+ +LI DR E+ +
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
M R + P+ ++ ++ A C A L E+V T VC+ L
Sbjct: 438 SMIR-SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 399 GEDGLLGDEVHE 410
G+D L+ + E
Sbjct: 497 GKDQLVKKLLQE 508
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 124/316 (39%), Gaps = 37/316 (11%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
SLEFF W + + +H T + L + K+ L++ +
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDV------------LVNG 145
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
+ K+ +A L YR C R +++L + F A QM
Sbjct: 146 GVDLPAKVF-------DALLYSYR----ECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM 194
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ GF P + +SS G R+ A R +R M P+ T
Sbjct: 195 KDYGFL--PTVESCNAYMSSLLGQG-----------RVDIALRFYREMRRCKISPNPYTL 241
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N ++ G C++ ++ + +EL +DM++ G V+Y++LI + + A++ L++M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK-LKNMMG 300
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
+ P+ ++ +IH C A ++ EA E+ P TY + + G+
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 403 LLGDEVHERIKNGMRK 418
+ + + NG+++
Sbjct: 361 MAFRFYEDMVCNGIQR 376
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 152/383 (39%), Gaps = 78/383 (20%)
Query: 94 HRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNN 153
+DL L+ F ++H GFTH+ T + L RA A + + + N +
Sbjct: 60 QNIDLALQI---FLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSY--- 113
Query: 154 HRNNPITTATITCLIKLLGEQGLAS--EASL-TFYRMKQYHCRPDIRAYNTLIYALCRVG 210
P I LL GLA E+S+ F R+ + + +R+ NTL+ L +
Sbjct: 114 ----PPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 169
Query: 211 NFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK---------------- 254
F + + + F P+ FT +L+ + C+ + K
Sbjct: 170 RFDLVHAMFKNSK-ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 255 --------ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
R + A R+ ML +G+ PD TY L+DG CK R A + +DM+
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 307 KKGCAPNRVTYDSLIRYY-------SATN----------------------------EID 331
K PN VTY +IR A N ++D
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 332 RAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
A + R M + N+ +P ++ + +IH LC+ GRV EA E + G++P TY +
Sbjct: 349 EACGLWRKMLK-NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTL 406
Query: 392 CDKLCLAG---EDGLLGDEVHER 411
+C G E G L D+++ER
Sbjct: 407 IAGMCEKGELTEAGRLWDDMYER 429
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 30/274 (10%)
Query: 152 NNHRNNPITTATITC--LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRV 209
N+ + IT TC L+K L ++ A + P++ Y T++
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 210 GNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG-------ILTGCRK-------- 254
G+ AK +LE+M G++ PDA TYT+L+ YC+ G ++ K
Sbjct: 240 GDMESAKRVLEEMLDRGWY--PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 255 ---------ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
++ EA +F ML + F+PD +ID C+ +++ A L+ M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
K C P+ +LI + + A ++ + ++ IPS +Y +I +CE G
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK--GSIPSLLTYNTLIAGMCEKGE 415
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ EA ++ + P +TY ++ + L G
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 47/276 (17%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T T L+ + G SEA+ M++ P+ Y +I ALC+ A+ + ++
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 222 M--------------------------ELPGFW-------CPPDAFTYTILISSYCRHGI 248
M E G W C PD + LI C+ G
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG- 380
Query: 249 LTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
R+ EA +LF KG +P ++TYN LI G C+ + A L++DM ++
Sbjct: 381 ----------RVTEARKLFD-EFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAE 368
C PN TY+ LI S + V VL +M + P+ +++ + L + G+ +
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG-CFPNKTTFLILFEGLQKLGKEED 488
Query: 369 AWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLL 404
A + V G V +E ++ L K + G+L
Sbjct: 489 AMKIVSMAVMNGKVDKE-SWELFLKKFAGELDKGVL 523
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 148/354 (41%), Gaps = 39/354 (11%)
Query: 91 RDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKH 150
R R+D L K++ R V SG D +T + L + +T L++ +
Sbjct: 147 RGLARID-QLDKAMCILR-VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS--- 201
Query: 151 HNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
+P T +I+ + + G A +A + Q C P + Y L+ +CR
Sbjct: 202 ---LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYC 258
Query: 211 NFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLY--------- 261
ARA +LE M + G C PD TY L++ CR G L + L
Sbjct: 259 GSARAIEVLEDMAVEG--CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 262 ---------------EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
E + +M + P V+TYN LI+G CK + RA++ F M
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
++ C P+ VTY++++ S +D A+E+L ++ P +Y +I L + G +
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN-TCCPPGLITYNSVIDGLAKKGLM 435
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLC---LAGEDGLLGDEVHERIKNGMR 417
+A +++D G P + T R + C L E G + E R NG+R
Sbjct: 436 KKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR-GNGIR 488
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 17/253 (6%)
Query: 141 GFLKETANK-HHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAY 199
G L+E A+ H + T T L+ L E M Q P + Y
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITY 352
Query: 200 NTLIYALCRVGNFARA-KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR 258
N LI LC+ +RA F + +E C PD TY ++ + + G++
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQK---CLPDIVTYNTVLGAMSKEGMVD-------- 401
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
+A L L+ P ++TYN++IDG K +++ALEL+ M G P+ +T
Sbjct: 402 ---DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
SLI + N ++ A +VL++ +GI S+Y +I LC+ + A + ++
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGI-RGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Query: 379 GGNVPREYTYRLV 391
GG P E Y +
Sbjct: 518 GGCKPDETIYTAI 530
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
D T N ++ C ++ A +L E M + P+ + +L+R + +++D+A+ +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 338 RDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
R M ++ G+P + +Y II LC+ G + A L ++ G+ P TY V
Sbjct: 163 RVM-VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 53/262 (20%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+P+ +N+++ + R G + + +ME C P+ ++Y +L+ +YC G+++
Sbjct: 242 KPNATTFNSMMVSFYREGETEMVERIWREME-EEVGCSPNVYSYNVLMEAYCARGLMS-- 298
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
EA +++ M +G V D+V YN +I G C + + +A ELF DM KG
Sbjct: 299 ---------EAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIEC 349
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQR------------LNHGI------------- 347
+TY+ L+ Y ++D + V R+M+R L G+
Sbjct: 350 TCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAA 409
Query: 348 -------------PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDK 394
PS + Y ++ LCE G++ A + E+V G P + TYR D
Sbjct: 410 DIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Query: 395 LCLAGED---GLLGDEVHERIK 413
+ G++ LL E+ E +K
Sbjct: 470 YGIVGDEETSALLAIEMAESLK 491
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 13/233 (5%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI L G S+AS M + + PD+ +N LI A + G A+ L ++M +
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM-VKS 349
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C PD Y LI +C++ +R+ E +FR M +G V + VTY LI
Sbjct: 350 KHCFPDVVAYNTLIKGFCKY-----------KRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
G + A +F+ M G P+ +TY+ L+ ++ A+ V MQ+ +
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 347 IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ +YT +I ALC+AG+V + W L G P TY + C G
Sbjct: 459 L-DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 13/228 (5%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T L+ L + ASEA RM C+PD+ Y +I LC+ G A LL
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ME D Y +I C++ + + +A LF M KG PDV
Sbjct: 240 KMEKGKI--EADVVIYNTIIDGLCKY-----------KHMDDAFDLFNKMETKGIKPDVF 286
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN LI C R A L DM +K P+ V +++LI + ++ A ++ +M
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ H P +Y +I C+ RV E E+ G V TY
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Query: 167 LIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
LI ++G EA + M K HC PD+ AYNTLI C+ + +M
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
G + TYT LI HG R A +F+ M+ G PD++TYN L
Sbjct: 386 GL--VGNTVTYTTLI-----HGFFQA------RDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
+DG C ++ AL +FE M+K+ + VTY ++I +++ ++ + L
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS-LKG 491
Query: 346 GIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
P+ +YT ++ C G EA + VE+ + G +P TY
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M + P I N+L+ C + A L++QM G+ PD T+T L+ +
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY--QPDTVTFTTLVHGLFQ 192
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
H KA+ EA L M+ KG PD+VTY A+I+G CK AL L M
Sbjct: 193 H------NKAS-----EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAG 364
+K + V Y+++I +D A ++ M+ GI P +Y P+I LC G
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME--TKGIKPDVFTYNPLISCLCNYG 299
Query: 365 RVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
R ++A L ++++ P + + D G+
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI + A + F +M PDI YN L+ LC GN A + E
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M+ D TYT +I + C+ G ++ + LF + KG P+VV
Sbjct: 451 YMQKRDM--KLDIVTYTTMIEALCKAG-----------KVEDGWDLFCSLSLKGVKPNVV 497
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TY ++ G C+ + A LF +MK+ G PN TY++LIR + + E++++M
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+ G +S ++ + GR+ +++
Sbjct: 558 RSC--GFAGDASTFGLVTNMLHDGRLDKSF 585
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
+M+ ++ Y+ I CR + A +L +M G+ P T L++ +C
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYG--PSIVTLNSLLNGFC- 156
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
HG R+ EA L M+ G+ PD VT+ L+ G + + A+ L E M
Sbjct: 157 HG----------NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
KGC P+ VTY ++I E D A+ +L M++ Y II LC+
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK-GKIEADVVIYNTIIDGLCKYKH 265
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ +A+ ++ G P +TY + LC G
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 252 CRKATRRR------LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
CR+ R+ L +A LF M+ P +V ++ L+ K + + L E M
Sbjct: 42 CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
+ G + N TY I Y+ +++ A+ +L M +L +G PS + +++ C R
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNR 160
Query: 366 VAEAWSFLVELVDGGNVPREYTY 388
++EA + + ++V+ G P T+
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTF 183
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 14/239 (5%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T T LI L ++G A +A FY M+ PD A+N L+ C++G A LL
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
E GF ++ ++ G +A RR +A L+ ML K PD++
Sbjct: 294 FEKDGFVLGLRGYS-----------SLIDGLFRA--RRYTQAFELYANMLKKNIKPDIIL 340
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y LI G K +I+ AL+L M KG +P+ Y+++I+ ++ + +M
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
P + ++T +I ++C G V EA E+ G P T+ + D LC +GE
Sbjct: 401 E-TESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 16/238 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ L ++G S+A F M P+ Y LI LC+ G+ A+ L +M
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G + PD+ + L+ +C+ G R+ EA L RL GFV + Y
Sbjct: 260 QTSGNY--PDSVAHNALLDGFCKLG-----------RMVEAFELLRLFEKDGFVLGLRGY 306
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
++LIDG + R +A EL+ +M KK P+ + Y LI+ S +I+ A+++L M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP- 365
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ GI P + Y +I ALC G + E S +E+ + + P T+ ++ +C G
Sbjct: 366 -SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 31/238 (13%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
++A + M + + +PDI Y LI L + G A LL M P PD + Y
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM--PSKGISPDTYCYN 377
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRL-MLFKGFVPDVVTYNALIDGCCKTYRIQ 296
+I + C G+L E GR +L M PD T+ LI C+ ++
Sbjct: 378 AVIKALCGRGLL------------EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ---------RLNHGI 347
A E+F +++K GC+P+ T+++LI + E+ A +L M+ RL+H
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 348 PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE-DGLL 404
S + E+G + +A+ L D G+ P +Y ++ + C AG+ DG L
Sbjct: 486 NRS------FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGAL 537
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 100/239 (41%), Gaps = 26/239 (10%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LI+ L + G +A M PD YN +I ALC G + L Q+E+
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL--QLEM 399
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
PDA T+TILI S CR+G++ EA +F + G P V T+NA
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVR-----------EAEEIFTEIEKSGCSPSVATFNA 448
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE---VLRDMQ 341
LIDG CK+ ++ A L M+ R L +S D VE +L+ +
Sbjct: 449 LIDGLCKSGELKEARLLLHKME-----VGRPASLFLRLSHSGNRSFDTMVESGSILKAYR 503
Query: 342 RLNH-----GIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
L H P SY +I+ C AG + A L L G P TY + + L
Sbjct: 504 DLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I +L E T +K D + LI A ++G +A +M+
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK--E 155
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
F C PD FTY +++ R + A ++ ML P++ T+ L+
Sbjct: 156 FDCRPDVFTYNVILRVMMREEVF----------FMLAFAVYNEMLKCNCSPNLYTFGILM 205
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
DG K R A ++F+DM +G +PNRVTY LI D A ++ +MQ +
Sbjct: 206 DGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQT-SGN 264
Query: 347 IPSSSSYTPIIHALCEAGRVAEAWSFL 373
P S ++ ++ C+ GR+ EA+ L
Sbjct: 265 YPDSVAHNALLDGFCKLGRMVEAFELL 291
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T LI + GL EA F +++ C P + +N LI LC+ G A+ LL +M
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
E+ P F + +S T + + +A R G PD+V+Y
Sbjct: 470 EVGR---PASLF---LRLSHSGNRSFDTMVESGS---ILKAYRDLAHFADTGSSPDIVSY 520
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
N LI+G C+ I AL+L ++ KG +P+ VTY++LI
Sbjct: 521 NVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 16/256 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + L+ L ++G +A R P+ YNT+I CR G+ A+ +E M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
E G PD Y LI +C G + K + M KG P V TY
Sbjct: 416 EKQGM--KPDHLAYNCLIRRFCELGEMENAEKEVNK-----------MKLKGVSPSVETY 462
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LI G + Y + ++ ++M+ G PN V+Y +LI +++ A V RDM+
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME- 521
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGED 401
+ G+ P Y +I C G++ +A+ F E++ G TY + D L + G+
Sbjct: 522 -DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 402 GLLGDEVHERIKNGMR 417
D + E + G++
Sbjct: 581 SEAEDLLLEISRKGLK 596
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 113/249 (45%), Gaps = 22/249 (8%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
CLI+ E G A +MK P + YN LI R F + +L++ME
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G P+ +Y LI+ C+ +L EA + R M +G P V YN
Sbjct: 488 NGTM--PNVVSYGTLINCLCKGS-----------KLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
LIDGCC +I+ A ++M KKG N VTY++LI S T ++ A ++L ++ R
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR-- 592
Query: 345 HGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGL 403
G+ P +Y +I AG V + E+ G P TY L+ + L ++G+
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL---ISLCTKEGI 649
Query: 404 LGDEVHERI 412
E+ ER+
Sbjct: 650 ---ELTERL 655
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 62/274 (22%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
RMK H P + +NTL+ L + G A+ +L++M+ GF PDAFT++IL Y
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV--PDAFTFSILFDGYSS 331
Query: 246 H-------GIL-TGCRKATRRRLYEAGRLFRLM----------------LFKGFVPDVVT 281
+ G+ T + Y L + + KG VP+ V
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 282 YNALIDGCCK------------------------TYR--IQRALELFE---------DMK 306
YN +IDG C+ Y I+R EL E MK
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
KG +P+ TY+ LI Y E D+ ++L++M+ N +P+ SY +I+ LC+ ++
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED-NGTMPNVVSYGTLINCLCKGSKL 510
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
EA ++ D G P+ Y ++ D C G+
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 183 TFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISS 242
F + + RP Y I A ++ + + L +M+ + P F Y +LI
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY--PSVFIYNVLIDG 223
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
C+ +R+ +A +LF ML + +P ++TYN LIDG CK +++ ++
Sbjct: 224 LCKG-----------KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCE 362
E MK P+ +T+++L++ ++ A VL++M+ L +P + +++ +
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF-VPDAFTFSILFDGYSS 331
Query: 363 AGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ A VD G YT ++ + LC G+
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 22/204 (10%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+ T LI L G SEA + + +PD+ YN+LI GN R L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR--------------------KATRR 258
E+M+ G P TY +LIS + GI R A
Sbjct: 622 YEEMKRSGI--KPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
+ +A L + M+ K D TYN+LI G K ++ L ++M + P TY+
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 319 SLIRYYSATNEIDRAVEVLRDMQR 342
+++ + + A R+MQ
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQE 763
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 13/236 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T ++ L E G EA + + H PD YN L+ LC+ + +++M
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
F PD ++TILI + C + L EA L + GF PD Y
Sbjct: 221 R-DDFDVKPDLVSFTILIDNVCNS-----------KNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N ++ G C + A+ +++ MK++G P+++TY++LI S ++ A L+ M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+ P +++YT +++ +C G A S L E+ G P + TY + LC A
Sbjct: 329 AGYE-PDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 38/303 (12%)
Query: 113 HSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLG 172
++G D+VT L +KE KH +P T T L+K L
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKH------SPPDTYTYNFLLKHLC 205
Query: 173 E-QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPP 231
+ + L + +PD+ ++ LI +C N A +L+ ++ GF P
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK--P 263
Query: 232 DAFTYTILISSYCR--------------------------HGILTGCRKATRRRLYEAGR 265
D F Y ++ +C + ++ G KA R + EA
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR--VEEARM 321
Query: 266 LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
+ M+ G+ PD TY +L++G C+ AL L E+M+ +GCAPN TY++L+
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Query: 326 ATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
+D+ +E L +M + + S+ Y ++ +L ++G+VAEA+ VD ++
Sbjct: 382 KARLMDKGME-LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDA 440
Query: 386 YTY 388
Y
Sbjct: 441 SAY 443
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P T+ IL+S CR A + R+ LM+ G PD VT + + C
Sbjct: 120 PGRSTFLILLSHACR---------APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 170
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS 350
+T R+ A +L +++ +K P+ TY+ L+++ ++ E + +M+ P
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230
Query: 351 SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
S+T +I +C + + EA + +L + G P + Y + C
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 15/225 (6%)
Query: 177 ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
EA T MK + RP + +Y T+I C+ F + +L +ME G PP++ TY
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG--SPPNSITY 297
Query: 237 TILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
T ++SS ++ EA R+ M G PD + YN LI + R++
Sbjct: 298 TTIMSSL-----------NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 297 RALELFE-DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
A +F +M + G + N TY+S+I Y +E D+A+E+L++M+ N P +Y P
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVP-REYTYRLVCDKLCLAG 399
++ + + G V E L E+V ++ E TY + +LC A
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 117/322 (36%), Gaps = 63/322 (19%)
Query: 78 LHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATK 137
L DGL+ +RD R LG+ +W E+ G H +MA V + A K
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGI------LKWAESCKGHKHSS-DAYDMA-VDILGKAKK 136
Query: 138 TLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIR 197
W +KE + + +T T+ +++ G EA F R+ ++ +
Sbjct: 137 --WDRMKEFVERMRGD---KLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
+ N L+ LC+
Sbjct: 192 SMNLLLDTLCK------------------------------------------------- 202
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
+ E R+ L L P+ T+N I G CK R++ AL ++MK G P ++Y
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
++IR Y E + E+L +M+ N P+S +YT I+ +L EA +
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEME-ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 378 DGGNVPREYTYRLVCDKLCLAG 399
G P Y + L AG
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAG 343
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 31/184 (16%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
+P + T T ++ L Q EA RMK+ C+PD YN LI+ L R G A+
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHG---------------------------IL 249
+ ++E+P + TY +I+ YC H +L
Sbjct: 350 RVF-RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 250 TGCRKATRRRLYEAGRLFRLMLFKGFVP-DVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
C K R + E G+L + M+ K + D TY LI C+ + A LFE+M +
Sbjct: 409 RSCFK--RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 309 GCAP 312
P
Sbjct: 467 DITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 15/225 (6%)
Query: 177 ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
EA T MK + RP + +Y T+I C+ F + +L +ME G PP++ TY
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG--SPPNSITY 297
Query: 237 TILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
T ++SS ++ EA R+ M G PD + YN LI + R++
Sbjct: 298 TTIMSSL-----------NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 297 RALELFE-DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
A +F +M + G + N TY+S+I Y +E D+A+E+L++M+ N P +Y P
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVP-REYTYRLVCDKLCLAG 399
++ + + G V E L E+V ++ E TY + +LC A
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 117/322 (36%), Gaps = 63/322 (19%)
Query: 78 LHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATK 137
L DGL+ +RD R LG+ +W E+ G H +MA V + A K
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGI------LKWAESCKGHKHSS-DAYDMA-VDILGKAKK 136
Query: 138 TLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIR 197
W +KE + + +T T+ +++ G EA F R+ ++ +
Sbjct: 137 --WDRMKEFVERMRGD---KLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
+ N L+ LC+
Sbjct: 192 SMNLLLDTLCK------------------------------------------------- 202
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
+ E R+ L L P+ T+N I G CK R++ AL ++MK G P ++Y
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
++IR Y E + E+L +M+ N P+S +YT I+ +L EA +
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEME-ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 378 DGGNVPREYTYRLVCDKLCLAG 399
G P Y + L AG
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAG 343
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 31/184 (16%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
+P + T T ++ L Q EA RMK+ C+PD YN LI+ L R G A+
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHG---------------------------IL 249
+ ++E+P + TY +I+ YC H +L
Sbjct: 350 RVF-RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Query: 250 TGCRKATRRRLYEAGRLFRLMLFKGFVP-DVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
C K R + E G+L + M+ K + D TY LI C+ + A LFE+M +
Sbjct: 409 RSCFK--RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 309 GCAP 312
P
Sbjct: 467 DITP 470
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 21/244 (8%)
Query: 179 EASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA TF + ++ PD+ YNT+I ALCR G+ + E++E GF PD ++
Sbjct: 175 EAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGF--EPDLISFN 232
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
L+ + R R E R++ LM K P++ +YN+ + G + +
Sbjct: 233 TLLEEFYR-----------RELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTD 281
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPI 356
AL L + MK +G +P+ TY++LI Y N ++ ++ +M+ G+ P + +Y +
Sbjct: 282 ALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE--KGLTPDTVTYCML 339
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGM 416
I LC+ G + A E + + R Y+ V ++L AG+ DE + +KNG
Sbjct: 340 IPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGK----IDEATQLVKNGK 395
Query: 417 RKRY 420
+ Y
Sbjct: 396 LQSY 399
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 153 NHRNNPITTATIT--CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
+ +N +T ++IT C++++ E GL A F M PD +Y ++ R G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 211 NFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM 270
A L M GF PD T T+++++ C +G++ A FR M
Sbjct: 232 KIQEADRWLTGMIQRGF--IPDNATCTLILTALCENGLVN-----------RAIWYFRKM 278
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
+ GF P+++ + +LIDG CK I++A E+ E+M + G PN T+ +LI
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 331 DRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRL 390
++A + + R + P+ +YT +I C+ ++ A + + G P TY
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 391 VCDKLCLAGEDG-------LLGDE 407
+ + C AG G L+GDE
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDE 422
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 48/269 (17%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHC-RPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T T LI L ++G +A F ++ + +P++ Y ++I C+ RA+ L +
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M+ G + P+ TYT LI+ +C+ G + R YE L LM +GF+P++ T
Sbjct: 384 MKEQGLF--PNVNTYTTLINGHCKAG--------SFGRAYE---LMNLMGDEGFMPNIYT 430
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YNA ID CK R A EL G + VTY LI+ N+I++A+ M
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMN 490
Query: 342 --------RLNHG--------------------------IPSSSSYTPIIHALCEAGRVA 367
RLN+ IP+ +YT +I C+ G +
Sbjct: 491 KTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDID 550
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLC 396
A + + G VP +TY + LC
Sbjct: 551 LALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 117/295 (39%), Gaps = 69/295 (23%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T +I ++ + A + F RMK+ P++ Y TLI C+ G+F RA L+ M
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 223 ELPGFW---------------------------------CPPDAFTYTILISSYCRHG-- 247
GF D TYTILI C+
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 248 -------------------------ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
I CR+ +++ E+ RLF+L++ G +P TY
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQ---KKMKESERLFQLVVSLGLIPTKETY 536
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
++I CK I AL+ F +MK+ GC P+ TY SLI + +D A ++ M
Sbjct: 537 TSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM-- 594
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
++ G+ P + + + C+ A A L+E +D R T R + KLC
Sbjct: 595 IDRGLSPPEVTRVTLAYEYCKRNDSANAM-ILLEPLDKKLWIR--TVRTLVRKLC 646
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
RL EA + M +G P +T N +++ + I+ A +F++M +G P+ +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
++ +I A L M + IP +++ T I+ ALCE G V A + +++D
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGF-IPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 379 GGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKR-YKQTMMVKPVMTRKGYPE 437
G P + + D LC G + + E ++NG + Y T ++ + ++G+ E
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG-LCKRGWTE 339
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
+ G EASL F ++ P I YNTLI LC GN A+ L E+M + PD
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF--PD 443
Query: 233 AFTYTILISSYCRHGILT---------------------GCRKATRRRLYEAGRLFRL-- 269
TYT L+ + ++G L+ R RL ++ + FRL
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 270 --MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
+ PD+ YN IDG CK + +A+E + + G P+ VTY ++IR Y
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 328 NEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
+ A + +M R PS +Y +I+ +AGR+ +A+ + E+ G P T
Sbjct: 564 GQFKMARNLYDEMLR-KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 388 YRLVCDKLCLAG 399
+ + +C AG
Sbjct: 623 HNALLYGMCKAG 634
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 191 HCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILT 250
H PD+ YN I LC+VGN +A ++ G PD TYT +I Y +G
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL--VPDHVTYTTVIRGYLENGQFK 567
Query: 251 GCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGC 310
R L+ ML K P V+TY LI G K R+++A + +MKK+G
Sbjct: 568 MARN-----------LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 311 APNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEA 369
PN +T+++L+ ID A L M+ GIP + SYT +I C+ + E
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE--EGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 370 WSFLVELVDGGNVPREYTYR 389
E++D P YT+R
Sbjct: 675 VKLYKEMLDKEIEPDGYTHR 694
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 108/284 (38%), Gaps = 54/284 (19%)
Query: 145 ETANKHHNNHRNN--PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTL 202
E A + H + R + +T + LI+ +QGL +A M P YN
Sbjct: 290 EEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIY 349
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE 262
I ALC G A+ LL M PD +Y L+ Y + G + E
Sbjct: 350 ICALCDFGRIDDARELLSSM------AAPDVVSYNTLMHGYIKMG-----------KFVE 392
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
A LF + P +VTYN LIDG C++ ++ A L E+M + P+ +TY +L++
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 323 YYSATNEIDRAVEVLRDMQR-----------------------------------LNHGI 347
+ + A EV +M R +H
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 348 PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
P + Y I LC+ G + +A F ++ G VP TY V
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
R + +A ++ M+ G +P V+T+N ++D C K ++R +++ +MK++ + VTY
Sbjct: 217 RMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTY 276
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+ LI +S +++ A DM+R + + S+ P+I C+ G +AW E++
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAV-TPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 378 DGGNVPREYTYRLVCDKLCLAG 399
+ G P TY + LC G
Sbjct: 336 NAGIYPTTSTYNIYICALCDFG 357
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 18/233 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++K+L + + ++AS + M ++ P + +NT++ + + G+ R + +M+
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
TY ILI+ + ++G ++ EA R M GF ++N LI
Sbjct: 269 I--EFSEVTYNILINGFSKNG-----------KMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
+G CK A + ++M G P TY+ I ID A E+L M
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-----A 370
Query: 347 IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
P SY ++H + G+ EA +L G P TY + D LC +G
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 94/258 (36%), Gaps = 18/258 (6%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T ++ + G + MK+ + YN LI + G A+
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
M GF P +++ LI YC+ G+ T ML G P
Sbjct: 297 GDMRRSGFAVTP--YSFNPLIEGYCKQGLFDDAWGVTDE-----------MLNAGIYPTT 343
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TYN I C RI A EL M AP+ V+Y++L+ Y + A + D
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ R PS +Y +I LCE+G + A E+ P TY + G
Sbjct: 400 L-RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNG 458
Query: 400 EDGLLGDEVHERIKNGMR 417
+ + E ++ G++
Sbjct: 459 NLSMATEVYDEMLRKGIK 476
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
L+ L GL E + M + PDI +NTL+ C++G AK + + G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C PD FTYT I+ +CR R+ + A ++F+ M G + V+Y LI
Sbjct: 186 --CDPDYFTYTSFITGHCR-----------RKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
G + +I AL L MK C PN TY LI + + A+ + + M G
Sbjct: 233 YGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE--SG 290
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
I P YT +I + C + EA L +++ G +P TY + C
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC 341
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 18/189 (9%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
HRN + T LI L E EA +MK +C P++R Y LI ALC G +
Sbjct: 222 HRNE----VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKS 277
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
A L +QM G PD YT+LI S+C L EA L ML
Sbjct: 278 EAMNLFKQMSESGI--KPDDCMYTVLIQSFCSGDTLD-----------EASGLLEHMLEN 324
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G +P+V+TYNALI G CK + +A+ L M ++ P+ +TY++LI ++ +D A
Sbjct: 325 GLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 334 VEVLRDMQR 342
+L M+
Sbjct: 384 YRLLSLMEE 392
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M Q C + +Y LIY L A LL +M+ C P+ TYT+LI +
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN--CCPNVRTYTVLIDAL 270
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C G +K+ EA LF+ M G PD Y LI C + A L E
Sbjct: 271 CGSG-----QKS------EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M + G PN +TY++LI+ + N + +A+ +L M N +P +Y +I C +
Sbjct: 320 HMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNL-VPDLITYNTLIAGQCSS 377
Query: 364 GRVAEAWSFLVELVDGGNVPREYT 387
G + A+ L + + G VP + T
Sbjct: 378 GNLDSAYRLLSLMEESGLVPNQRT 401
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 236 YTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRI 295
Y L+SS R G++ E RL+ ML PD+ T+N L++G CK +
Sbjct: 123 YNNLLSSLARFGLVE-----------EMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
A + + + GC P+ TY S I + E+D A +V ++M + N + SYT
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ-NGCHRNEVSYTQ 230
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+I+ L EA ++ EA S LV++ D P TY ++ D LC +G+
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQ 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 15/237 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ + G EA + Q C PD Y + I CR A + ++M
Sbjct: 157 TFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEM 216
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G C + +YT LI +G+ +++ EA L M P+V TY
Sbjct: 217 TQNG--CHRNEVSYTQLI-----YGLFEA------KKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
LID C + + A+ LF+ M + G P+ Y LI+ + + + +D A +L M
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
N +P+ +Y +I C+ V +A L ++++ VP TY + C +G
Sbjct: 324 -NGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 134/325 (41%), Gaps = 35/325 (10%)
Query: 100 LRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPI 159
L K++E + +V D + C + +LV++ E + R + +
Sbjct: 150 LSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCD------RGDSV 203
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ L+K + +G C P+I YNT+I C++G+ A +
Sbjct: 204 DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF 263
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHG----------------------ILTGCRKATR 257
++++L GF P T+ +I+ +C+ G L A
Sbjct: 264 KELKLKGFM--PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKY 321
Query: 258 RRLYEA--GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
R Y+ ++ PDV TYN LI+ CK + + A+ ++ KKG PN +
Sbjct: 322 RHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL 381
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLV 374
+Y LI+ Y + E D A ++L +Q G P +Y +IH L +G + +A + V
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLL--LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAG 399
+L+D G P Y ++ LC G
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTG 464
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD YN L+ LC+ G F AK L +M PDA+ Y LI + R G R
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL--PDAYVYATLIDGFIRSGDFDEAR 505
Query: 254 KATRRRLYEAGRLFRL---MLFKGF---------------------VPDVVTYNALIDGC 289
K + + ++ + + KGF VPD TY+ +IDG
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
K + A+++F M+K C PN VTY SLI + + A E ++MQ L +P+
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ-LRDLVPN 624
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGN-VPREYTY 388
+YT +I +L + E + EL+ VP E T+
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTF 664
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 47/260 (18%)
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGF------- 227
G A L F +K P + + T+I C+ G+F + LL +++ G
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 228 ---------------------W-----CPPDAFTYTILISSYCRHGILTGCRKATRRRLY 261
W C PD TY ILI+ C+ G ++ L
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK----KEVAVGFLD 369
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
EA + KG +P+ ++Y LI CK+ A +L M ++GC P+ VTY LI
Sbjct: 370 EASK-------KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ +D AV + ++ ++ G+ P ++ Y ++ LC+ GR A E++D
Sbjct: 423 HGLVVSGHMDDAVNM--KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 381 NVPREYTYRLVCDKLCLAGE 400
+P Y Y + D +G+
Sbjct: 481 ILPDAYVYATLIDGFIRSGD 500
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 35/251 (13%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+IK G+ EA RM + H PD Y+T+I + + A A + ME
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C P+ TYT LI+ +C G A F+ M + VP+VVTY LI
Sbjct: 586 --CKPNVVTYTSLINGFCCQG-----------DFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 287 DGCCK-TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
K + +++A+ +E M C PN VT++ L++ + + +VL + NH
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT----SGKVLAEPDGSNH 688
Query: 346 GIPS-----------------SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
G S +++Y + LC G V A F ++V G P ++
Sbjct: 689 GQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSF 748
Query: 389 RLVCDKLCLAG 399
+ C+ G
Sbjct: 749 AAILHGFCVVG 759
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 16/234 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
AT LI L ++G A + P+ +Y LI A C+ + A LL
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
QM G C PD TY ILI HG++ + +A + ++ +G PD
Sbjct: 405 QMAERG--CKPDIVTYGILI-----HGLVVS------GHMDDAVNMKVKLIDRGVSPDAA 451
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
YN L+ G CKT R A LF +M + P+ Y +LI + + + D A +V
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS-- 509
Query: 341 QRLNHGIPSSSS-YTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ G+ + +I C +G + EA + + + + VP ++TY + D
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 137/353 (38%), Gaps = 60/353 (16%)
Query: 85 LGPAAYRDPHRVDLGLRKSLEFFRWV--EAHSGFTHDEVTCREMACVLVRANATKTLWGF 142
+ P + V++G++ F W+ E F + C +L R +
Sbjct: 66 ISPFVFDRIQDVEIGVK----LFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDV 121
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTF-YRMKQYHCRPDIRAYNT 201
L N+ N +T ++ ++ E G S+A + Y ++ Y PD+ A N+
Sbjct: 122 LGNLRNE------NVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNS 175
Query: 202 LIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLY 261
L+ L + A+ + ++M G D ++ IL+ C G + RK R
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGD--SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
KG +P++V YN +I G CK I+ A +F+++K KG P T+ ++I
Sbjct: 234 -----------KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 322 RYYSATNEIDRAVEVLRDMQR---------LNHGI------------------------- 347
+ + + +L +++ LN+ I
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 348 PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
P ++Y +I+ LC+ G+ A FL E G +P +Y + C + E
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 128/319 (40%), Gaps = 67/319 (21%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG-NFARAKFL 218
T + LI G GL EA F MK+Y RP++ YN +I A + G F +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR----KATRRRLYE------------ 262
++M+ G PD T+ L++ R G+ R + T RR+ +
Sbjct: 327 FDEMQRNG--VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 263 --------AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
A + M K +P+VV+Y+ +IDG K R AL LF +M+ G A +R
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLN------------------------------ 344
V+Y++L+ Y+ + A+++LR+M +
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 345 ----HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
H +P+ +Y+ +I + G EA E G Y + D LC +
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC---K 561
Query: 401 DGLLGDEVH---ERIKNGM 416
+GL+G V E K G+
Sbjct: 562 NGLVGSAVSLIDEMTKEGI 580
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 33/258 (12%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ + GL A F M D+ +YNTL+ A+C+ G A +L QM
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 223 ELPGFWCPPDAFTYTILISSYCRHG--------------------------ILTGCRKAT 256
P P+ +Y+ +I + + G +L+ K
Sbjct: 401 --PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
R EA + R M G DVVTYNAL+ G K + ++F +MK++ PN +T
Sbjct: 459 RSE--EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS-YTPIIHALCEAGRVAEAWSFLVE 375
Y +LI YS A+E+ R+ + + G+ + Y+ +I ALC+ G V A S + E
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFK--SAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 376 LVDGGNVPREYTYRLVCD 393
+ G P TY + D
Sbjct: 575 MTKEGISPNVVTYNSIID 592
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
L+ + + G + EA M + D+ YN L+ + G + K + +M+
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
P+ TY+ LI Y + G+ EA +FR G DVV Y+ALI
Sbjct: 510 VL--PNLLTYSTLIDGYSKGGLYK-----------EAMEIFREFKSAGLRADVVLYSALI 556
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
D CK + A+ L ++M K+G +PN VTY+S+I + + +DR+ +
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 200 NTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR 259
+ +I L R G AK + E G+ + ++ LIS+Y R G+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGY--GNTVYAFSALISAYGRSGLHE--------- 285
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT-YRIQRALELFEDMKKKGCAPNRVTYD 318
EA +F M G P++VTYNA+ID C K ++ + F++M++ G P+R+T++
Sbjct: 286 --EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFN 343
Query: 319 SLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
SL+ S + A + +M +R+ + SY ++ A+C+ G++ A+ L ++
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDV---FSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 377 VDGGNVPREYTYRLVCDKLCLAG 399
+P +Y V D AG
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAG 423
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 54/237 (22%)
Query: 192 CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP---PDAFTYTILISSYCRHGI 248
CRPD+ +Y T+I AL + G +A L M W PD +I + C
Sbjct: 278 CRPDVVSYGTMINALTKKGKLGKAMELYRAM-----WDTRRNPDVKICNNVIDALC---- 328
Query: 249 LTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
++R+ EA +FR + KG P+VVTYN+L+ CK R ++ EL E+M+ K
Sbjct: 329 -------FKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 309 G--CAPNRVTYDSLIRYYSATNEID--------------------------------RAV 334
G C+PN VT+ L++Y + ++D +
Sbjct: 382 GGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVR 441
Query: 335 EVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
E+ +M+R G P +YT IH L G++ EA S+ E++ G VP T L+
Sbjct: 442 EIWSEMERSGLG-PDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
R +++ C DI+A N ++ C +GN AK + ++ C PD +Y +I++ +
Sbjct: 239 RRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWK--DIIASKCRPDVVSYGTMINALTK 294
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G +L +A L+R M PDV N +ID C RI ALE+F ++
Sbjct: 295 KG-----------KLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREI 343
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+KG PN VTY+SL+++ ++ E++ +M+
Sbjct: 344 SEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARA-KFLLEQMELPGFWCPPDAFTYTILISS 242
F M++ DI N +I+ L + A KF +E PD TY +I
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK---MEPDIVTYNTMICG 616
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
YC + RRL EA R+F L+ F P+ VT LI CK + A+ +F
Sbjct: 617 YC-----------SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALC 361
M +KG PN VTY L+ ++S + +I+ + ++ +MQ GI PS SY+ II LC
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE--KGISPSIVSYSIIIDGLC 723
Query: 362 EAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ GRV EA + + +D +P Y ++ C G
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 155 RNNPITTATITC--LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
+ N I+ C +I LL + +AS F + + PDI YNT+I C +
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
A+ + E +++ F P+ T TILI C++ + G A R+F +M
Sbjct: 624 DEAERIFELLKVTPF--GPNTVTLTILIHVLCKNNDMDG-----------AIRMFSIMAE 670
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
KG P+ VTY L+D K+ I+ + +LFE+M++KG +P+ V+Y +I +D
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 730
Query: 333 AVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
A + Q ++ +P +Y +I C+ GR+ EA ++ G P + R
Sbjct: 731 ATNIFH--QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 786
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 19/239 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T LIK L + G EA + ++ + P I Y++LI C+ GN L
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E M G+ PPD Y +L+ + G++ + + + L ++ RL +V
Sbjct: 450 EDMIKMGY--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL-----------NV 496
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE---- 335
V +N+LIDG C+ R AL++F M G P+ T+ +++R + + ++
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556
Query: 336 -VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR-LVC 392
L D+ + N + +IH L + R+ +A F L++G P TY ++C
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P++ + TLI C+ G RA L + ME G PD Y+ LI Y + G+L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI--EPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 254 KATRRRLYEAGRL------------------------FRLMLFKGFVPDVVTYNALIDGC 289
K + L++ +L ++ ML +G P+VVTY LI G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
C+ RI A ++ + K+G P+ VTY SLI + + + DM ++ + P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PD 460
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELV 377
Y ++ L + G + A F V+++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+ D+ +++ I + G+ A A + ++M G P+ TYTILI C+ G
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI--SPNVVTYTILIKGLCQDG----- 405
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
R+YEA ++ +L +G P +VTY++LIDG CK ++ L+EDM K G P
Sbjct: 406 ------RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 313 NRVTYDSLIRYYSATNEIDRA----VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAE 368
+ V Y L+ S + A V++L RLN + + +I C R E
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV-----FNSLIDGWCRLNRFDE 514
Query: 369 A 369
A
Sbjct: 515 A 515
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P+ T+ LI+ +C+ G + A LF++M +G PD++ Y+ LIDG
Sbjct: 284 PNVVTFCTLINGFCKRG-----------EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
K + +LF KG + V + S I Y + ++ A V + M L GI P+
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM--LCQGISPN 390
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+YT +I LC+ GR+ EA+ +++ G P TY + D C G
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
H+ + + I + + G + AS+ + RM P++ Y LI LC+ G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
A + Q+ G P TY+ LI +C+ G L L+ M+
Sbjct: 409 EAFGMYGQILKRGM--EPSIVTYSSLIDGFCKCG-----------NLRSGFALYEDMIKM 455
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G+ PDVV Y L+DG K + A+ M + N V ++SLI + N D A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 334 VEVLRDMQRLNHGI-PSSSSYTPII 357
++V R M +GI P +++T ++
Sbjct: 516 LKVFRLMGI--YGIKPDVATFTTVM 538
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T+T LI +L + A F M + +P+ Y L+ + + + L
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E+M+ G P +Y+I+I C+ G R+ EA +F + +PDV
Sbjct: 701 EEMQEKGI--SPSIVSYSIIIDGLCKRG-----------RVDEATNIFHQAIDAKLLPDV 747
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
V Y LI G CK R+ A L+E M + G P+ + +L Y
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 791
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 25/345 (7%)
Query: 59 GFRHRTPLRQRNLNDEHRKLHD--GLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGF 116
G H + N D+ K D + L P + R+ + + FF W +
Sbjct: 96 GILHEAIMANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHY 155
Query: 117 THDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLL---GE 173
+H+ + EM +L ++TK + + RNN T + L+++L E
Sbjct: 156 SHEPIAYNEMIDIL---SSTKYKNKQFRIVIDMLDYMKRNNK-TVVLVDVLLEILRKYCE 211
Query: 174 QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDA 233
+ L + + +P+I A+N L+ ALC+ G + LL +M PDA
Sbjct: 212 RYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR---HRVKPDA 268
Query: 234 FTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTY 293
T+ +L +CR R +A +L M+ G P+ TY A ID C+
Sbjct: 269 NTFNVLFFGWCR-----------VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 294 RIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL--NHGIPSSS 351
+ A +LF+ M KG A + T + A + D+A E + R+ +P S
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 352 SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+Y +I +C A +V EA+ FL E+ + G P TY LC
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 13/162 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T +I L + A E RM C PD+ Y +I +C A L
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
++M G+ PPD TY + C + R+ EA +L+ M+ P V
Sbjct: 400 DEMSNKGY--PPDIVTYNCFLRVLCEN-----------RKTDEALKLYGRMVESRCAPSV 446
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
TYN LI + A + +M K+ C + TY ++I
Sbjct: 447 QTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMI 488
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 12/235 (5%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
L+ L + G +A M++ P+ +YNTLI LC V N +A +L M G
Sbjct: 162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG 221
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
P+ T I++ + C+ G++ K + ++ + + D+V L+
Sbjct: 222 I--RPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL-------DIVICTILM 272
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
D C K + +ALE++++M +K + V Y+ +IR ++ + A + DM + G
Sbjct: 273 DSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK--RG 330
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ P +Y +I ALC+ G+ EA + +GG P + +Y+++ LC+ G+
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 124/304 (40%), Gaps = 29/304 (9%)
Query: 102 KSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWG-----FLKETANKHHNNHRN 156
K+L F + + G + VTC ++V A K + G L+E + ++ N
Sbjct: 209 KALYLFNTMNKY-GIRPNRVTCN----IIVHALCQKGVIGNNNKKLLEEILD---SSQAN 260
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
P+ T L+ + G +A + M Q + D YN +I LC GN A
Sbjct: 261 APLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAY 320
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+ M G PD FTY LIS+ C+ G + EA L M G
Sbjct: 321 GFMCDMVKRGV--NPDVFTYNTLISALCKEG-----------KFDEACDLHGTMQNGGVA 367
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
PD ++Y +I G C + RA E M K P + ++ +I Y + A+ V
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 337 LRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
L M L++G+ P+ + +IH + GR+ +AW E+ P TY L+
Sbjct: 428 LNLM--LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAA 485
Query: 396 CLAG 399
C G
Sbjct: 486 CTLG 489
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 14/247 (5%)
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
+ +N P + +I+ L G A M + PD+ YNTLI ALC+ G F
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
A L M+ G PD +Y ++I C HG + A ML
Sbjct: 352 DEACDLHGTMQNGGV--APDQISYKVIIQGLCIHGDVN-----------RANEFLLSMLK 398
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
+P+V+ +N +IDG + AL + M G PN T ++LI Y +
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID 458
Query: 333 AVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
A V +M R P +++Y ++ A C G + A+ E++ G P TY +
Sbjct: 459 AWWVKNEM-RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Query: 393 DKLCLAG 399
LC G
Sbjct: 518 RGLCWKG 524
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 56/260 (21%)
Query: 196 IRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKA 255
+ +++++ LC G A +L ++M G P T+ L++ C+ G +
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGV--IPGLITHNHLLNGLCKAGYIE----- 173
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
+A L R M G P+ V+YN LI G C + +AL LF M K G PNRV
Sbjct: 174 ------KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Query: 316 T---------------------YDSLIRYYSATNEID------------------RAVEV 336
T + ++ A +D +A+EV
Sbjct: 228 TCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEV 287
Query: 337 LRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
++M + N +P+ S Y II LC +G + A+ F+ ++V G P +TY + L
Sbjct: 288 WKEMSQKN--VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
Query: 396 CLAGEDGLLGDEVHERIKNG 415
C G+ D +H ++NG
Sbjct: 346 CKEGKFDEACD-LHGTMQNG 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 22/197 (11%)
Query: 184 FYRMKQYHCRPDIRA-YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILIS- 241
F K Y + D A +N L Y L + R L E + C +F Y +S
Sbjct: 72 FSDQKDYDQKEDPEAIFNVLDYIL--KSSLDRLASLRESV------CQTKSFDYDDCLSI 123
Query: 242 --SYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
S R L G +L A L + M++ G +P ++T+N L++G CK I++A
Sbjct: 124 HSSIMRDLCLQG-------KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD 176
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIH 358
L +M++ G +PN V+Y++LI+ + N +D+A+ + M + +GI P+ + I+H
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNK--YGIRPNRVTCNIIVH 234
Query: 359 ALCEAGRVAEAWSFLVE 375
ALC+ G + L+E
Sbjct: 235 ALCQKGVIGNNNKKLLE 251
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P++ +N +I R G+ + A +L M G P+ +T LI Y + G
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV--KPNVYTNNALIHGYVKGG------ 454
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
RL +A + M PD TYN L+ C ++ A +L+++M ++GC P+
Sbjct: 455 -----RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+TY L+R + +A +L +Q
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQ 537
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 172 GEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPP 231
G G S A M Y +P++ N LI+ + G A ++ +M P
Sbjct: 416 GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI--HP 473
Query: 232 DAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK 291
D TY +L+ + C G L A +L+ ML +G PD++TY L+ G C
Sbjct: 474 DTTTYNLLLGAACTLG-----------HLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 292 TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
R+++A L ++ G + V + L + Y+
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYT 556
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 118/295 (40%), Gaps = 59/295 (20%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI L G E MK +PD+ YNTLI +G A+ L+EQM
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 223 ELPGF------------WC----------------------PPDAFTYTILISSYCRHGI 248
E G W PD TY LI +Y + G
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 249 LTGCRKATR------------------------RRLYEAGRLFRLMLFKGFVPDVVTYNA 284
L+G + R R+L EA L +GF+ D VTY
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
LI G + ++++ALE++++MKK P T++SLI + + A+E ++ +
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE-S 550
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+P S++ II C+ GRV +A+ F E + P YT ++ + LC G
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
NP T ++K + ++G S+ MK+ P+ YN L+Y C++G+ A
Sbjct: 237 NP-DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
++E M+ PD TY ILI+ C G + E L M
Sbjct: 296 QIVELMKQTNVL--PDLCTYNILINGLCNAG-----------SMREGLELMDAMKSLKLQ 342
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNE---IDRA 333
PDVVTYN LIDGC + A +L E M+ G N+VT++ +++ + + R
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 334 VEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
V+ L DM HG P +Y +I A + G ++ A + E+ G T +
Sbjct: 403 VKELVDM----HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 393 DKLC 396
D LC
Sbjct: 459 DALC 462
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 150 HHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRV 209
H N H + P + A + +G A F +M + +P++ NTL+ L R
Sbjct: 120 HPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRY 179
Query: 210 GN---FARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRL 266
+ + A+ + + M G + T+ +L++ YC G L R + E
Sbjct: 180 PSSFSISSAREVFDDMVKIGVSL--NVQTFNVLVNGYCLEGKLEDALGMLERMVSE---- 233
Query: 267 FRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSA 326
FK PD VTYN ++ K R+ EL DMKK G PNRVTY++L+ Y
Sbjct: 234 -----FK-VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCK 287
Query: 327 TNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREY 386
+ A +++ M++ N +P +Y +I+ LC AG + E + + P
Sbjct: 288 LGSLKEAFQIVELMKQTN-VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV 346
Query: 387 TYRLVCD 393
TY + D
Sbjct: 347 TYNTLID 353
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 50/280 (17%)
Query: 115 GFTHDEVTCREMACVLVRANATKT---LWGFLKETANKHHNNHRNNPITTATITCLIKLL 171
GF DEVT + R + +W +K+ + P T +T LI L
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV--------KITP-TVSTFNSLIGGL 531
Query: 172 GEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA-KFLLEQMELPGFWCP 230
G A F + + PD +N++I C+ G +A +F E ++
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK---HSFK 588
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD +T IL++ C+ G+ T + L F ++ + V D VTYN +I C
Sbjct: 589 PDNYTCNILLNGLCKEGM-------TEKAL----NFFNTLIEEREV-DTVTYNTMISAFC 636
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL-----------RD 339
K +++ A +L +M++KG P+R TY+S I ++ E+L RD
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRD 696
Query: 340 MQRLNHGIPSSS-----------SYTPIIHALCEAGRVAE 368
+Q P++S +Y+ +I LC GR+ E
Sbjct: 697 LQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C ++ R + + A +F M+ G +V T+N L++G C +++ AL + E
Sbjct: 169 CNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE 228
Query: 304 DMKKK-GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCE 362
M + P+ VTY+++++ S + E+L DM++ N +P+ +Y +++ C+
Sbjct: 229 RMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK-NGLVPNRVTYNNLVYGYCK 287
Query: 363 AGRVAEAWSFLVELVDGGNV-PREYTYRLVCDKLCLAG 399
G + EA+ +VEL+ NV P TY ++ + LC AG
Sbjct: 288 LGSLKEAFQ-IVELMKQTNVLPDLCTYNILINGLCNAG 324
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 119/301 (39%), Gaps = 68/301 (22%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T T L++L + G S+A F M++ D+ Y +LI CR GN RA L ++
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 222 MELPGFWCPPDAFTYTILISSYCRHG--------------------------ILTG-CRK 254
+ G P ++TY LI C+ G ++ G CRK
Sbjct: 355 LTEKGL--SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDV----------------------------------- 279
+ EA ++ +M KGF DV
Sbjct: 413 GM---VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
V+Y LID CK ++ A LF +M KG PN +TY+ +I Y +I A ++ +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M+ N P S +YT +IH C A V EA E+ G TY ++ L AG
Sbjct: 530 MEA-NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG 588
Query: 400 E 400
+
Sbjct: 589 K 589
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
IT LI +G+ EAS+ + M+Q + D+ NT+ R+ + AK
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
L +M G +YT LI YC+ G + EA RLF M KG P+
Sbjct: 457 LFRMMEGG--VKLSTVSYTNLIDVYCKEG-----------NVEEAKRLFVEMSSKGVQPN 503
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+TYN +I CK +I+ A +L +M+ G P+ TY SLI + +D A+ +
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+M L +S +YT +I L +AG+ EA+ E+
Sbjct: 564 EMG-LKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA +RM + + +Y LI C+ GN AK L +M G P+A TY +
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG--VQPNAITYNV 509
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
+I +YC+ G ++ EA +L M G PD TY +LI G C + A
Sbjct: 510 MIYAYCKQG-----------KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+ LF +M KG N VTY +I S + D A + +M+R + I + YT +I
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI-DNKVYTALIG 617
Query: 359 AL 360
++
Sbjct: 618 SM 619
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F RM + + + ++ LCR G ++K L+++ + G P+A+TY +I++Y
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGI--KPEAYTYNTIINAY 269
Query: 244 CRH-------GILTGCRK-----------------ATRRRLYEAGRLFRLMLFKGFVPDV 279
+ G+L +K ++ +A +LF M +G DV
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
Y +LI C+ ++RA LF+++ +KG +P+ TY +LI E+ A ++ +
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
MQ I + + +I C G V EA
Sbjct: 390 MQSKGVNI-TQVVFNTLIDGYCRKGMVDEA 418
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
++ TI++ CR G + ++ +L + KG P+ TYN +I+ K
Sbjct: 224 VYSLTIVVEGLCRRG-----------EVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS- 351
+ + MKK G N+VTY L+ ++ A ++ +M+ GI S
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE--RGIESDVH 330
Query: 352 SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG---LLGDEV 408
YT +I C G + A+ EL + G P YTY + D +C GE G +L +E+
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 409 HER-------IKNGMRKRY------KQTMMVKPVMTRKGY 435
+ + N + Y + M+ VM +KG+
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 105/224 (46%), Gaps = 16/224 (7%)
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
+I G+ A TF RM PD +NTLI C+ G A+ + E ME
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
G C P A TY I+I+SY + R + RL M +G +P+VVT+ L
Sbjct: 509 G--CLPCATTYNIMINSY-----------GDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
+D K+ R A+E E+MK G P+ Y++LI Y+ ++AV R M +
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT--SD 613
Query: 346 GI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
G+ PS + +I+A E R AEA++ L + + G P TY
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
TAT+ +I L + G EA F ++Q +P RAYN L+ + G A+ ++
Sbjct: 304 TATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ME G PD TY++LI +Y G R + EAG + P+
Sbjct: 364 EMEKRG--VSPDEHTYSLLIDAYVNAGRWESARIVLKE--MEAGDV---------QPNSF 410
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
++ L+ G Q+ ++ ++MK G P+R Y+ +I + N +D A+ M
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 341 QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
L+ GI P ++ +I C+ GR A + G +P TY ++ +
Sbjct: 471 --LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 14/199 (7%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
D++ N +I + G+ ++A LL + G T +IS+ G
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGL--SAKTATLVSIISALADSG------- 318
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
R EA LF + G P YNAL+ G KT ++ A + +M+K+G +P+
Sbjct: 319 ----RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
TY LI Y + A VL++M+ P+S ++ ++ + G + + L
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 375 ELVDGGNVPREYTYRLVCD 393
E+ G P Y +V D
Sbjct: 434 EMKSIGVKPDRQFYNVVID 452
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYR--MKQYHCRPDIRAYN 200
L+ NK+ N +N + +A I+ K+ G+ LA L F+ + P++ Y
Sbjct: 157 LEMMTNKNVNYPFDNFVCSAVISGFCKI-GKPELA----LGFFESAVDSGVLVPNLVTYT 211
Query: 201 TLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRL 260
TL+ ALC++G + L+ ++E GF D Y+ I Y + G L R
Sbjct: 212 TLVSALCQLGKVDEVRDLVRRLEDEGF--EFDCVFYSNWIHGYFKGGALVDALMQDRE-- 267
Query: 261 YEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
M+ KG DVV+Y+ LIDG K ++ AL L M K+G PN +TY ++
Sbjct: 268 ---------MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS-YTPIIHALCEAGRVAEAWSFLVELVDG 379
IR +++ A + + L+ GI Y +I +C G + A+S L ++
Sbjct: 319 IRGLCKMGKLEEAFVLFNRI--LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 380 GNVPREYTYRLVCDKLCLAG--------EDGLLGDEV 408
G P TY V + LC+AG G++GD +
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVI 413
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 24/247 (9%)
Query: 141 GFLKETANK-HHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAY 199
GFL + N R + T T LI L +QG EA F ++ P Y
Sbjct: 669 GFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTY 728
Query: 200 NTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR 259
LI LC+ G F A+ LL+ M G P+ Y ++ YC+ G + R+
Sbjct: 729 GILIDNLCKEGLFLDAEKLLDSMVSKGL--VPNIIIYNSIVDGYCKLGQTEDAMRVVSRK 786
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
+ GR+ PD T +++I G CK ++ AL +F + K K + + +
Sbjct: 787 M--MGRV---------TPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 320 LIRYYSATNEIDRAVEVLRDM----------QRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
LI+ + ++ A +LR+M R++ + S S + LCE GRV +A
Sbjct: 836 LIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQA 895
Query: 370 WSFLVEL 376
L E+
Sbjct: 896 IKILDEI 902
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
YN+LI LC+ G A L + +E G P TY ILI + C+ G+
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGL--VPSEVTYGILIDNLCKEGLF-------- 741
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
+A +L M+ KG VP+++ YN+++DG CK + + A+ + P+ T
Sbjct: 742 ---LDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTV 798
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
S+I+ Y +++ A+ V + + N + +I C GR+ EA L E++
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTEFKDKNIS-ADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 378 DGGNVPR 384
+V +
Sbjct: 858 VSESVVK 864
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGF----WCPPDAFTYTILISSYCRHGILT 250
D+ Y +I LC+ G FL++ + L F + TY LI+ C+ G L
Sbjct: 654 DVIDYTIIINGLCKEG------FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707
Query: 251 GCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGC 310
EA RLF + G VP VTY LID CK A +L + M KG
Sbjct: 708 -----------EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Query: 311 APNRVTYDSLIRYYSATNEIDRAVEVL--RDMQRLNHGIPSSSSYTPIIHALCEAGRVAE 368
PN + Y+S++ Y + + A+ V+ + M R+ P + + + +I C+ G + E
Sbjct: 757 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVT---PDAFTVSSMIKGYCKKGDMEE 813
Query: 369 AWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
A S E D + + + C G
Sbjct: 814 ALSVFTEFKDKNISADFFGFLFLIKGFCTKG 844
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 123/334 (36%), Gaps = 81/334 (24%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T +I+ L + G EA + F R+ D Y TLI +CR GN RA +L M
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKAT-------------------------- 256
E G P TY +I+ C G ++ + +
Sbjct: 374 EQRGI--QPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAV 431
Query: 257 ---RRRLYEA-------------------------GRLFRLMLFKGFVPDVVTYNALIDG 288
RRR EA L+R M PD TY +I G
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 289 CCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHG 346
CKT +I+ ALE+F +++K + V Y+ +I +D A EVL ++ + L
Sbjct: 492 YCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 347 IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGD 406
I +S + IHA G D G + Y + +CL G+L D
Sbjct: 551 IHTSRTLLHSIHA--NGG-------------DKGILGLVYGLEQLNSDVCL----GMLND 591
Query: 407 EVHERIKNGMRKRYKQTMMVKPVMTRKGYPEIEP 440
+ K G ++ + V +M RKG P
Sbjct: 592 AILLLCKRG---SFEAAIEVYMIMRRKGLTVTFP 622
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
DV+ Y +I+G CK + +AL L K +G N +TY+SLI + A+ +
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 338 RDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
++ + +PS +Y +I LC+ G +A L +V G VP Y + D C
Sbjct: 714 DSLENIGL-VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 398 AGE 400
G+
Sbjct: 773 LGQ 775
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 120/287 (41%), Gaps = 22/287 (7%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G DE TC + R + F E + + T T L+++ G+
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG------TVTYNALLQVFGKA 329
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
G+ +EA M++ C D YN L+ A R G A ++E M G P+A
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM--PNAI 387
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
TYT +I +Y + G + EA +LF M G VP+ TYNA++ K R
Sbjct: 388 TYTTVIDAYGKAG-----------KEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE-VLRDMQRLNHGIPSSSSY 353
+++ DMK GC+PNR T+++++ +D+ V V R+M+ P ++
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREMKSCGFE-PDRDTF 494
Query: 354 TPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+I A G +A E+ G TY + + L G+
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 541
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 27/296 (9%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI G G +AS + M + + YN L+ AL R G++ + ++ M
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR----RLYEAGRLFRLML------- 271
+ GF P +Y++++ Y + G G + R +++ + L R +L
Sbjct: 553 KSKGF--KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 272 -----------FK--GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
FK G+ PD+V +N+++ + +A + E +++ G +P+ VTY+
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
SL+ Y E +A E+L+ +++ + P SY +I C G + EA L E+ +
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEK-SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 379 GGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKG 434
G P +TY G + D + KN R MV R G
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
I +++LG + S A+ ++ D+RAY T+++A R G + +A L E+M
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G P TY +++ + + G ++ R+ L + M KG D T
Sbjct: 237 KEMG--PSPTLVTYNVILDVFGKMG------RSWRKIL----GVLDEMRSKGLKFDEFTC 284
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ ++ C + ++ A E F ++K G P VTY++L++ + A+ VL++M+
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGED 401
N S +Y ++ A AG EA + + G +P TY V D AG++
Sbjct: 345 -NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++ + + +A +++ PD+ YN+L+ R G +A+ +L+ +E
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PD +Y +I +CR G++ EA R+ M +G P + TYN +
Sbjct: 697 L--KPDLVSYNTVIKGFCRRGLMQ-----------EAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
G ++ E M K C PN +T+ ++ Y + A++ + ++ +
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 110/245 (44%), Gaps = 25/245 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYH------CRPDIRAYNTLIYALCRVGNFAR 214
T+ LI L + EA F +M+ + D +NTLI LC+VG
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
A+ LL +M+L C P+A TY LI YCR G L ++ R M
Sbjct: 389 AEELLVRMKLEE-RCAPNAVTYNCLIDGYCRAGKLETAKEVVSR-----------MKEDE 436
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
P+VVT N ++ G C+ + + A+ F DM+K+G N VTY +LI + + +++A+
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 335 EVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR---- 389
M L G P + Y +I LC+ R +A + +L +GG Y
Sbjct: 497 YWYEKM--LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 390 LVCDK 394
L CDK
Sbjct: 555 LFCDK 559
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 28/280 (10%)
Query: 128 CVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRM 187
C RANA W L + P+ L+ LG S + +M
Sbjct: 270 CKNARANAA---WDILSDLMKNK------TPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME----LPGFWCPPDAFTYTILISSY 243
+ RPD+ LI LC+ A + E+M G D+ + LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 244 CRHGILTGCRKATRRRLYEAGRLF-RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
C+ G RL EA L R+ L + P+ VTYN LIDG C+ +++ A E+
Sbjct: 381 CKVG-----------RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS-SSYTPIIHALC 361
MK+ PN VT ++++ + ++ AV DM++ G+ + +Y +IHA C
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK--EGVKGNVVTYMTLIHACC 487
Query: 362 EAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGED 401
V +A + ++++ G P Y + LC D
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 180 ASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
A + F M++ + ++ Y TLI+A C V N +A + E+M G C PDA Y L
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG--CSPDAKIYYAL 517
Query: 240 ISSYCR-------------------------HGILTG--CRKATRRRLYEAGRLFRLMLF 272
IS C+ + +L G C K ++YE + M
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYE---MLTDMEK 574
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
+G PD +TYN LI K + + E M++ G P TY ++I Y + E+D
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 333 AVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
A+++ +DM + P++ Y +I+A + G +A S E+
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
M++ +PD YNTLI + +F + ++EQM G P TY +I +YC
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL--DPTVTTYGAVIDAYCSV 629
Query: 247 GILTGCRKATRRRLYEAGRLFRLM-LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G L EA +LF+ M L P+ V YN LI+ K +AL L E+M
Sbjct: 630 G-----------ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
K K PN TY++L + + + + ++++ +M
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 20/233 (8%)
Query: 100 LRKSLEFFRWVEA--HSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNN 157
+R+ + R VE GF+ D + + + N T+ ++ L + + +
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML---TDMEKEGKKPD 580
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
IT T LI G+ +M++ P + Y +I A C VG A
Sbjct: 581 SITYNT---LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
L + M L P+ Y ILI+++ + G +A L M K P
Sbjct: 638 LFKDMGLHS-KVNPNTVIYNILINAFSKLG-----------NFGQALSLKEEMKMKMVRP 685
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
+V TYNAL + + + L+L ++M ++ C PN++T + L+ S ++E+
Sbjct: 686 NVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQME--LPGFWCPPDAFTYTILISSYCRHGILTGCRKAT 256
+ + I A CR A + M+ + G P+ Y +++ Y + G +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG---KPNVGVYNTVVNGYVKSGDMD------ 210
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
+A R ++ M + PDV T+N LI+G C++ + AL+LF +MK+KGC PN V+
Sbjct: 211 -----KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVS 265
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+++LIR + ++ +I+ V++ +M L S ++ ++ LC GRV +A +++L
Sbjct: 266 FNTLIRGFLSSGKIEEGVKMAYEMIELGCRF-SEATCEILVDGLCREGRVDDACGLVLDL 324
Query: 377 VDGGNVPREYTYRLVCDKLC 396
++ +P E+ Y + +KLC
Sbjct: 325 LNKRVLPSEFDYGSLVEKLC 344
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 179 EASLTFY-RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+ +L FY RM + +PD+ +N LI CR F A L +M+ G C P+ ++
Sbjct: 210 DKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG--CEPNVVSFN 267
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
LI + G ++ E ++ M+ G T L+DG C+ R+
Sbjct: 268 TLIRGFLSSG-----------KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDD 316
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
A L D+ K P+ Y SL+ N+ RA+E++ ++ + P + T ++
Sbjct: 317 ACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQ-TPCFIACTTLV 375
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
L ++GR +A F+ ++++ G +P T+ L+ LC
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM--LFKGFVPDVVTYNA 284
F CP + I +YCR R++ A F M L G P+V YN
Sbjct: 151 FSCPELEPIFRSAIDAYCRA-----------RKMDYALLAFDTMKRLIDG-KPNVGVYNT 198
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
+++G K+ + +AL ++ M K+ P+ T++ LI Y +++ D A+++ R+M+
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKE-K 257
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG--ED- 401
P+ S+ +I +G++ E E+++ G E T ++ D LC G +D
Sbjct: 258 GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
Query: 402 -GLLGDEVHERI 412
GL+ D +++R+
Sbjct: 318 CGLVLDLLNKRV 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 94/241 (39%), Gaps = 14/241 (5%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ LI+ G E Y M + CR L+ LCR G A L+
Sbjct: 262 NVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLV 321
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
++L P F Y L+ C G KA R A + + KG P
Sbjct: 322 --LDLLNKRVLPSEFDYGSLVEKLC------GENKAVR-----AMEMMEELWKKGQTPCF 368
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+ L++G K+ R ++A E M G P+ VT++ L+R +++ A LR
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA-NRLRL 427
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ P ++Y ++ + GR E + E++D +P +TY + D L G
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Query: 400 E 400
+
Sbjct: 488 K 488
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 84/220 (38%), Gaps = 23/220 (10%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G E TC + L R G + + NK R P + + KL GE
Sbjct: 293 GCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK-----RVLPSEFDYGSLVEKLCGEN 347
Query: 175 GL--ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
A E ++ Q C A TL+ L + G +A +E+M G PD
Sbjct: 348 KAVRAMEMMEELWKKGQTPC---FIACTTLVEGLRKSGRTEKASGFMEKMMNAGIL--PD 402
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
+ T+ +L+ C T +A RL L KG+ PD TY+ L+ G K
Sbjct: 403 SVTFNLLLRDLCSSDHST-----------DANRLRLLASSKGYEPDETTYHVLVSGFTKE 451
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
R + L +M K P+ TY+ L+ S T + R
Sbjct: 452 GRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 45/270 (16%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
++ T + ++ + G A A F K+ H + Y +IYA C+ N RA+ L
Sbjct: 377 MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEAL 436
Query: 219 LEQMELPGFWCP---------------------------------PDAFTYTILISSYCR 245
+ +ME G P P TY LI+ Y +
Sbjct: 437 VREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTK 496
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G ++ +A + R+M +G ++ TY+ +I+G K A +FEDM
Sbjct: 497 VG-----------KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
K+G P+ + Y+++I + +DRA++ +++MQ+L H P++ ++ PIIH ++G
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR-PTTRTFMPIIHGYAKSGD 604
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+ + + G VP +T+ + + L
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T CLI L + G S+A MK+ + +++ Y+ +I ++ ++A A +
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHG--------------------------ILTGCR 253
E M G PD Y +IS++C G I+ G
Sbjct: 543 EDMVKEGM--KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 254 KA--TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
K+ RR L +F +M G VP V T+N LI+G + ++++A+E+ ++M G +
Sbjct: 601 KSGDMRRSL----EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAW 370
N TY +++ Y++ + +A E +Q N G+ +Y ++ A C++GR+ A
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQ--NEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 371 SFLVELVDGGNVPR-EYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
+ E+ N+PR + Y ++ D G+ D + + K G++
Sbjct: 715 AVTKEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T +++ G +A F R++ DI Y L+ A C+ G A + ++M
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
P ++F Y ILI + R G ++EA L + M +G PD+ TY
Sbjct: 721 SARNI--PRNSFVYNILIDGWARRG-----------DVWEAADLIQQMKKEGVKPDIHTY 767
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ I C K + RA + E+M+ G PN TY +LI+ ++ + ++A+ +M+
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSF 372
+ GI P + Y ++ +L +AEA+ +
Sbjct: 828 M--GIKPDKAVYHCLLTSLLSRASIAEAYIY 856
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 149 KHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCR 208
K R+ P TT T +I + G + F M++ C P + +N LI L
Sbjct: 578 KEMQKLRHRP-TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Query: 209 VGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFR 268
+A +L++M L G + TYT ++ Y G TG +A F
Sbjct: 637 KRQMEKAVEILDEMTLAG--VSANEHTYTKIMQGYASVGD-TG----------KAFEYFT 683
Query: 269 LMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATN 328
+ +G D+ TY AL+ CCK+ R+Q AL + ++M + N Y+ LI ++
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 329 EIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
++ A ++++ M++ G+ P +YT I A +AG + A + E+ G P T
Sbjct: 744 DVWEAADLIQQMKK--EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 388 Y 388
Y
Sbjct: 802 Y 802
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 37/262 (14%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++K G +G A TF RM+ P R Y +LI+A + A + +M+ G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 227 FWCPPDAFTYTILISSYCRHG---------------------------ILTGCRKATRRR 259
TY++++ + + G I C+ R
Sbjct: 375 I--EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMER 432
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
A L R M +G + Y+ ++DG ++ L +F+ +K+ G P VTY
Sbjct: 433 ---AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 320 LIRYYSATNEIDRAVEVLRDMQR--LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
LI Y+ +I +A+EV R M+ + H + +Y+ +I+ + A A++ ++V
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNL---KTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 378 DGGNVPREYTYRLVCDKLCLAG 399
G P Y + C G
Sbjct: 547 KEGMKPDVILYNNIISAFCGMG 568
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 110/245 (44%), Gaps = 25/245 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYH------CRPDIRAYNTLIYALCRVGNFAR 214
T+ LI L + EA F +M+ + D +NTLI LC+VG
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
A+ LL +M+L C P+A TY LI YCR G L ++ R M
Sbjct: 389 AEELLVRMKLEE-RCVPNAVTYNCLIDGYCRAGKLETAKEVVSR-----------MKEDE 436
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
P+VVT N ++ G C+ + + A+ F DM+K+G N VTY +LI + + +++A+
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 335 EVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR---- 389
M L G P + Y +I LC+ R +A + +L +GG Y
Sbjct: 497 YWYEKM--LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 390 LVCDK 394
L CDK
Sbjct: 555 LFCDK 559
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 28/280 (10%)
Query: 128 CVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRM 187
C RAN T W L + P+ L+ LG S + +M
Sbjct: 270 CKNARAN---TAWDILSDLMKNK------TPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME----LPGFWCPPDAFTYTILISSY 243
+ RPD+ LI LC+ A + EQM G D+ + LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 244 CRHGILTGCRKATRRRLYEAGRLF-RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
C+ G RL EA L R+ L + VP+ VTYN LIDG C+ +++ A E+
Sbjct: 381 CKVG-----------RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS-SSYTPIIHALC 361
MK+ PN VT ++++ + ++ AV DM++ G+ + +Y +IHA C
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK--EGVKGNVVTYMTLIHACC 487
Query: 362 EAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGED 401
V +A + ++++ G P Y + LC D
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 180 ASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
A + F M++ + ++ Y TLI+A C V N +A + E+M G C PDA Y L
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG--CSPDAKIYYAL 517
Query: 240 ISSYCR-------------------------HGILTG--CRKATRRRLYEAGRLFRLMLF 272
IS C+ + +L G C K ++YE + M
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE---MLTDMEK 574
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
+G PD +TYN LI K + + E M++ G P TY ++I Y + E+D
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 333 AVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
A+++ +DM + P++ Y +I+A + G +A S E+
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI L ++ A + M++ +PD YNTLI + +F + ++EQM G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM-LFKGFVPDVVTYNAL 285
P TY +I +YC G L EA +LF+ M L P+ V YN L
Sbjct: 612 L--DPTVTTYGAVIDAYCSVG-----------ELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
I+ K +AL L E+MK K PN TY++L + + + + ++++ +M
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+ T LI G+ +M++ P + Y +I A C VG A L +
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M L P+ Y ILI+++ + G +A L M K P+V
Sbjct: 641 DMGLHS-KVNPNTVIYNILINAFSKLG-----------NFGQALSLKEEMKMKMVRPNVE 688
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
TYNAL + + + L+L ++M ++ C PN++T + L+ S ++E+
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 26/343 (7%)
Query: 101 RKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPIT 160
+K+LEFF WVE SGF H T + +L + + W + N+ N + P
Sbjct: 62 QKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALI----NRMIGNTESVP-N 116
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T + K L EA + ++ ++ R + YN L+ ALC + A+ L
Sbjct: 117 HVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCF 175
Query: 221 QMELPG-FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ G + + + +++ + + G C++ ++ M +G D+
Sbjct: 176 GKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKK-----------MDTEGVTKDL 224
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+Y+ +D CK+ + +A++L+++MK + + V Y+++IR A+ ++ + V R+
Sbjct: 225 FSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFRE 284
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M R P+ +++ II LCE GR+ +A+ L E+ G P TY + +L
Sbjct: 285 M-RERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS 343
Query: 400 ED-GLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPEIEPV 441
E L G I++G+R + +M+ R G+ ++PV
Sbjct: 344 EILSLFG----RMIRSGVRPKMDTYVMLMRKFERWGF--LQPV 380
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 14/223 (6%)
Query: 155 RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR 214
R P A TCL L+ + L Y +P+ +N L+ C+ G+
Sbjct: 155 RVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINF 214
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK- 273
A ++E+M+ G P++ TY+ L+ H R EA LF M+ K
Sbjct: 215 AFLVVEEMKRSGI-SYPNSITYSTLMDCLFAHS-----------RSKEAVELFEDMISKE 262
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G PD VT+N +I+G C+ ++RA ++ + MKK GC PN Y +L+ + +I A
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+ ++++ + + YT +++ C G EA L E+
Sbjct: 323 KQTFDEVKKTGLKL-DTVGYTTLMNCFCRNGETDEAMKLLGEM 364
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 20/245 (8%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARA 215
N IT +T L+ L + EA F M + PD +N +I CR G RA
Sbjct: 231 NSITYST---LMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
K +L+ M+ G C P+ + Y+ L++ +C+ G ++ EA + F + G
Sbjct: 288 KKILDFMKKNG--CNPNVYNYSALMNGFCKVG-----------KIQEAKQTFDEVKKTGL 334
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
D V Y L++ C+ A++L +MK C + +TY+ ++R S+ + A++
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 336 VLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDK 394
+L Q + G+ + SY I++ALC G + +A FL + + G P T+ + +
Sbjct: 395 MLD--QWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVR 452
Query: 395 LCLAG 399
LC +G
Sbjct: 453 LCESG 457
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T +I G A MK+ C P++ Y+ L+ C+VG AK ++
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 222 MELPGFWCPPDAFTYTILISSYCRHG------ILTGCRKATRRRLYEAGRLFRLMLFKGF 275
++ G D YT L++ +CR+G L G KA+R R
Sbjct: 329 VKKTGL--KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR---------------- 370
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
D +TYN ++ G R + AL++ + +G N+ +Y ++ E+++AV+
Sbjct: 371 -ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 336 VLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDK 394
L M GI P +++ ++ LCE+G L+ + G +P ++ V +
Sbjct: 430 FLSVMSE--RGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVES 487
Query: 395 LC 396
+C
Sbjct: 488 IC 489
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 123/310 (39%), Gaps = 40/310 (12%)
Query: 114 SGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGE 173
SG + D C + L A + + E ++T LI +
Sbjct: 178 SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVK-----LSTVVYNALISGFCK 232
Query: 174 QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDA 233
G +A M + C PD+ YN L+ RA+ ++ +M G DA
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI--QLDA 290
Query: 234 FTYTILISSYCRHG---------------------------ILTGCRKATRRRLYEAGRL 266
++Y L+ +CR I T CR + R+ Y RL
Sbjct: 291 YSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAY---RL 347
Query: 267 FRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSA 326
F M KG V +VVTY +LI + A +L + M + G +P+R+ Y +++ +
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 327 TNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
+ +D+A V DM + H I P + SY +I LC +GRV EA ++ P E
Sbjct: 408 SGNVDKAYGVFNDM--IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDE 465
Query: 386 YTYRLVCDKL 395
T++ + L
Sbjct: 466 LTFKFIIGGL 475
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 64/248 (25%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWC------PPDAFTYTILISSYCRHG 247
PDI A+N + LCR A + F+C PD +YTILI+ R G
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFA--------VQTFFCMVQRGREPDVVSYTILINGLFRAG 163
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPD----------------------------- 278
+T +A ++ M+ G PD
Sbjct: 164 KVT-----------DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIK 212
Query: 279 -------VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
V YNALI G CK RI++A L M K GC P+ VTY+ L+ YY N +
Sbjct: 213 SARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
Query: 332 RAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRL 390
RA V+ +M R GI + SY ++ C + ++F+V+ ++ +Y
Sbjct: 273 RAEGVMAEMVR--SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYST 330
Query: 391 VCDKLCLA 398
+ + C A
Sbjct: 331 LIETFCRA 338
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 17/231 (7%)
Query: 171 LGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP 230
L + G+ A F M+ R YN I L R F A+ + M+ GF
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P FTY+ IS C K + L +A L M GF+PD+ +N +D C
Sbjct: 79 P--FTYSRFISGLC---------KVKKFDLIDA--LLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
+ ++ A++ F M ++G P+ V+Y LI ++ AVE+ M R G+ P
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR--SGVSPD 183
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP-REYTYRLVCDKLCLAG 399
+ + ++ LC A +V A+ + E + V Y + C AG
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T ++ L + G +A F M ++ PD +YN+LI LCR G A L E M+
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK- 457
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G C PD T+ +I G++ G ++L A +++ M+ KGF D +
Sbjct: 458 -GKECCPDELTFKFIIG-----GLIRG------KKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 285 LIDGCC 290
LI C
Sbjct: 506 LIKASC 511
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 18/183 (9%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
MK P+ YNTL++ALC+ G RA+ L+ +M+ P+ T+ ILIS+YC
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK------EPNDVTFNILISAYCNE 261
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
++L ++ L GFVPDVVT +++ C R+ ALE+ E ++
Sbjct: 262 -----------QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
KG + V ++L++ Y A ++ A +M+R + +P+ +Y +I C+ G +
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGY-LPNVETYNLLIAGYCDVGML 369
Query: 367 AEA 369
A
Sbjct: 370 DSA 372
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 34/290 (11%)
Query: 92 DPHRVDLGLRK-----SLEFFRWVEAHSGFTHDEVTCREM---ACVLVRANATKTLWGFL 143
D H V L L + +LE FRW GF H T R + CV R + T++ L
Sbjct: 43 DDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFD---TVYQLL 99
Query: 144 KETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLI 203
E + P A +I+ G L + ++ +P ++ +N+++
Sbjct: 100 DEMPDSI-----GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSIL 154
Query: 204 YALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEA 263
L + +F +M G D +TY IL+ + R+ +
Sbjct: 155 DVLVKEDIDIAREFFTRKMMASGI--HGDVYTYGILMKGL-----------SLTNRIGDG 201
Query: 264 GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
+L ++M G P+ V YN L+ CK ++ RA L +MK+ PN VT++ LI
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISA 257
Query: 324 YSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
Y ++ +++ +L L +P + T ++ LC GRV+EA L
Sbjct: 258 YCNEQKLIQSMVLLEKCFSLGF-VPDVVTVTKVMEVLCNEGRVSEALEVL 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 119/299 (39%), Gaps = 62/299 (20%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T+T ++++L +G SEA R++ + D+ A NTL+ C +G A+
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI 342
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGC--------RKATRRRLYEAGRLFRLMLF 272
+ME G+ P+ TY +LI+ YC G+L A R L R +
Sbjct: 343 EMERKGYL--PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 273 KGFVPD------------------VVTYNALIDGCCKTYRIQRALELFEDMKK------- 307
G D + YN +I G K R + ALE M+K
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVD 460
Query: 308 --------------------------KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
+G P+ + LI YS +I+ ++E++ DM
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ +P SS++ +I C+ +V F+ ++ + G VP +Y + ++LC+ G+
Sbjct: 521 TRGY-LPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGD 578
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 196 IRAYNTLIYALCRVGNFARA-KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
I YN +IY + + A +FLL+ +L P A + + S C G + +
Sbjct: 425 IDPYNCVIYGFYKENRWEDALEFLLKMEKLF-----PRAVDRSFKLISLCEKGGMDDLKT 479
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
A + + E G VP ++ + LI + +I+ +LEL DM +G P
Sbjct: 480 AYDQMIGEGG-----------VPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRS 528
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
T++++I + +++ ++ + DM +P + SY P++ LC G + +AW
Sbjct: 529 STFNAVIIGFCKQDKVMNGIKFVEDMAE-RGCVPDTESYNPLLEELCVKGDIQKAWLLFS 587
Query: 375 ELVDGGNVP 383
+V+ VP
Sbjct: 588 RMVEKSIVP 596
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 171 LGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP 230
LG+ S F +MK+ PDI YN LI + RVG A + E++E C
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD--CK 509
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD +Y LI+ ++G + EA F+ M KG PDVVTY+ L++
Sbjct: 510 PDIISYNSLINCLGKNGDVD-----------EAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
KT R++ A LFE+M KGC PN VTY+ L+ AV++ M++ G+ P
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQ--QGLTPD 616
Query: 350 SSSYT 354
S +YT
Sbjct: 617 SITYT 621
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LI G G EA F +++ C+PDI +YN+LI L + G+ A ++M
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G PD TY+ L+ + + R+ A LF ML KG P++VTY
Sbjct: 539 QEKGL--NPDVVTYSTLMECFGK-----------TERVEMAYSLFEEMLVKGCQPNIVTY 585
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
N L+D K R A++L+ MK++G P+ +TY L R S +
Sbjct: 586 NILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVS 630
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+++ L G EA ++ + D YNT+ AL ++ + L E+M+ G
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PD FTY ILI+S+ R G + EA +F + PD+++YN+LI
Sbjct: 473 --PSPDIFTYNILIASFGRVG-----------EVDEAINIFEELERSDCKPDIISYNSLI 519
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
+ K + A F++M++KG P+ VTY +L+ + T ++ A + +M L G
Sbjct: 520 NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM--LVKG 577
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
P+ +Y ++ L + GR AEA ++ G P TY ++
Sbjct: 578 CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+T + L++ L + G SEA F M + + + +Y +++ +LC G A +
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
L ++ G D Y + S+ + +++ LF M G PD
Sbjct: 430 LSKIHEKGVVT--DTMMYNTVFSALGK-----------LKQISHIHDLFEKMKKDGPSPD 476
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+ TYN LI + + A+ +FE++++ C P+ ++Y+SLI ++D A +
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 339 DMQR--LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+MQ LN P +Y+ ++ + RV A+S E++ G P TY ++ D L
Sbjct: 537 EMQEKGLN---PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 36/250 (14%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+ + T CL++ S+A + +++ + DI AYN L+ AL + +A +
Sbjct: 201 MNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQV 257
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
E M+ C D +TYTI+I + R G + EA LF M+ +G +
Sbjct: 258 FEDMK--KRHCRRDEYTYTIMIRTMGRIG-----------KCDEAVGLFNEMITEGLTLN 304
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
VV YN L+ K + +A+++F M + GC PN TY L+ A ++ R V+
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Query: 339 DMQR-LNHGIPSSSSYTPIIHALCEAGRVAEA-------WSFLVELVDGGNVPREYTYRL 390
+R + GI Y+ ++ L + G V+EA WSF V+ +Y
Sbjct: 365 ISKRYMTQGI-----YSYLVRTLSKLGHVSEAHRLFCDMWSFPVK-------GERDSYMS 412
Query: 391 VCDKLCLAGE 400
+ + LC AG+
Sbjct: 413 MLESLCGAGK 422
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 20/248 (8%)
Query: 126 MACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFY 185
M C+L N W KE + + + N T +I ++ EA FY
Sbjct: 190 MGCLL-NVNEIDRFWKVYKEMDSLGYVENVN------TFNLVIYSFCKESKLFEALSVFY 242
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME-LPGFWCPPDAFTYTILISSYC 244
RM + P++ ++N +I C+ G+ A LL +M + G + P+A TY +I+ +C
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 245 RHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFED 304
+ G RL A R+ M+ G + TY AL+D + AL L ++
Sbjct: 303 KAG-----------RLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDE 351
Query: 305 MKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAG 364
M KG N V Y+S++ + +I+ A+ VLRDM N I + ++ LC G
Sbjct: 352 MTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ-AIVVRGLCRNG 410
Query: 365 RVAEAWSF 372
V EA F
Sbjct: 411 YVKEAVEF 418
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
++ +N +IY+ C+ A + +M G W P+ ++ ++I C+ G +
Sbjct: 217 NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVW--PNVVSFNMMIDGACKTGDM----- 269
Query: 255 ATRRRLYEAGRLFRLMLFKGFV-PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R L G++ M+ FV P+ VTYN++I+G CK R+ A + DM K G N
Sbjct: 270 --RFALQLLGKMG--MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
TY +L+ Y D A+ + +M + ++ Y I++ L G + A S L
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTS-KGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 374 VELVDGGNVPREYTYRLVCDKLCLAG 399
++ +T +V LC G
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNG 410
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 33/263 (12%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ G G + EA M + YN+++Y L G+ A +L M
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGC----RKATRRRLYE---------------- 262
D FT I++ CR+G + R+ + ++L E
Sbjct: 388 NSKNM--QIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDK 445
Query: 263 ----AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
A ++ ML +G D +++ LIDG K +++RALE+++ M K N V Y+
Sbjct: 446 KLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYN 505
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL-- 376
S++ S A V+ M+ I +Y +++ + G V EA L ++
Sbjct: 506 SIVNGLSKRGMAGAAEAVVNAME-----IKDIVTYNTLLNESLKTGNVEEADDILSKMQK 560
Query: 377 VDGGNVPREYTYRLVCDKLCLAG 399
DG T+ ++ + LC G
Sbjct: 561 QDGEKSVSLVTFNIMINHLCKFG 583
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD+ +++L+ A + G+ A ++EQ GF A + G L
Sbjct: 148 PDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFM--------GCLLNVN 197
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
+ R ++++ M G+V +V T+N +I CK ++ AL +F M K G PN
Sbjct: 198 EIDR-----FWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPN 252
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRL--NHGIPSSSSYTPIIHALCEAGRVAEAWS 371
V+++ +I T ++ A+++L M + N P++ +Y +I+ C+AGR+ A
Sbjct: 253 VVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
Query: 372 FLVELVDGGNVPREYTYRLVCDKLCLAG 399
++V G E TY + D AG
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAG 340
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++ L ++G+A A M+ DI YNTL+ + GN A +L +M+
Sbjct: 507 IVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEEADDILSKMQKQD 562
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE-AGRLFRLMLFKGFVPDVVTYNAL 285
T+ I+I+ C+ G YE A + + M+ +G VPD +TY L
Sbjct: 563 GEKSVSLVTFNIMINHLCKFGS------------YEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
I K ++ +EL + + +G P+ Y S++R
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVR 647
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
+L F+W E GF H + L + K +W + + K ++
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK-------KLLSKE 163
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T + + EA F++M+++ + + +N ++ L + N A+ + ++M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ F PD +YTIL+ + L + R M +GF PDVV Y
Sbjct: 224 KKKRF--EPDIKSYTILLEGW-----------GQELNLLRVDEVNREMKDEGFEPDVVAY 270
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+I+ CK + + A+ F +M+++ C P+ + SLI + +++ A+E +
Sbjct: 271 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK- 329
Query: 343 LNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
+ G P + +Y ++ A C + R+ +A+ + E+ G P TY ++
Sbjct: 330 -SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 180 ASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
A + F M++ + ++ Y TLI+A C V N +A + E+M G C PDA Y L
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG--CSPDAKIYYAL 517
Query: 240 ISSYCR-------------------------HGILTG--CRKATRRRLYEAGRLFRLMLF 272
IS C+ + +L G C K ++YE + M
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE---MLTDMEK 574
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
+G PD +TYN LI K + + E M++ G P TY ++I Y + E+D
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 333 AVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV- 391
A+++ +DM + P++ Y +I+A + G +A S E+ P TY +
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 392 -CDKLCLAGEDGL-LGDEVHERIKNGMRKRYK 421
C GE L L DE+ E + N +R +++
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEHLVNQIRSQWR 726
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 28/280 (10%)
Query: 128 CVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRM 187
C RAN T W L + P+ L+ LG S + +M
Sbjct: 270 CKNARAN---TAWDILSDLMKNK------TPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME----LPGFWCPPDAFTYTILISSY 243
+ RPD+ LI LC+ A + EQM G D+ + LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 244 CRHGILTGCRKATRRRLYEAGRLF-RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
C+ G RL EA L R+ L + VP+ VTYN LIDG C+ +++ A E+
Sbjct: 381 CKVG-----------RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS-SSYTPIIHALC 361
MK+ PN VT ++++ + ++ AV DM++ G+ + +Y +IHA C
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK--EGVKGNVVTYMTLIHACC 487
Query: 362 EAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGED 401
V +A + ++++ G P Y + LC D
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI L ++ A + M++ +PD YNTLI + +F + ++EQM G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM-LFKGFVPDVVTYNAL 285
P TY +I +YC G L EA +LF+ M L P+ V YN L
Sbjct: 612 L--DPTVTTYGAVIDAYCSVG-----------ELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
I+ K +AL L E+MK K PN TY++L + + + + ++++ +M
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
+K Y RP + Y +LI ALC++G + A F L+ G DA Y+ LISS +
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFA-FKLKDEAYEG-KIKVDAAIYSTLISSLIKA 271
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
G R E + M KG PD VTYN LI+G C + A + ++M
Sbjct: 272 G-----------RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
+KG P+ ++Y+ ++ + + + A + DM R P + SY + LCE +
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS-PDTLSYRIVFDGLCEGLQF 379
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
EA L E++ G PR KLC +G+
Sbjct: 380 EEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 125/277 (45%), Gaps = 19/277 (6%)
Query: 159 ITTATITC-LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
+ T I C +I G L S A F M QY C+ +++ N+L+ AL + G + K
Sbjct: 80 VPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKE 139
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGI-LTGCRKATRRRLYEAGRLFRLMLFKGFV 276
L ++ G PDA TY ILI HG +GC +A +LF M+ K
Sbjct: 140 RLSSIDEFG---KPDACTYNILI-----HGCSQSGC-------FDDALKLFDEMVKKKVK 184
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDM-KKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
P VT+ LI G CK R++ AL++ DM K G P Y SLI+ E+ A +
Sbjct: 185 PTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFK 244
Query: 336 VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
L+D ++ Y+ +I +L +AGR E L E+ + G P TY ++ +
Sbjct: 245 -LKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
Query: 396 CLAGEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTR 432
C+ + + E ++ G++ M+ V R
Sbjct: 304 CVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFR 340
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 15/219 (6%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+ A + LI L + G ++E S+ M + C+PD YN LI C + A +
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
L++M G PD +Y +++ + R ++ EA LF M +G PD
Sbjct: 316 LDEMVEKGL--KPDVISYNMILGVFFRI-----------KKWEEATYLFEDMPRRGCSPD 362
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
++Y + DG C+ + + A + ++M KG P R + ++ + +++ +V+
Sbjct: 363 TLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVIS 422
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+ R G + ++ +I +C+ ++++ L+ V
Sbjct: 423 SLHRGIAG--DADVWSVMIPTMCKEPVISDSIDLLLNTV 459
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 139/341 (40%), Gaps = 38/341 (11%)
Query: 105 EFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATI 164
E F + F H R +L+ + + + KH ++ P+T
Sbjct: 69 EIFDYASQQPNFRH----SRSSHLILILKLGRGRYFNLIDDVLAKHRSS--GYPLTGEIF 122
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCR-VGNFARAKFLLEQME 223
T LIK+ E L + TFY+M +++ P + N ++ L G +A L +
Sbjct: 123 TYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSR 182
Query: 224 LPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
L G P+ +Y +L+ ++C + L+ A +LF ML + VPDV +Y
Sbjct: 183 LHGVM--PNTRSYNLLMQAFCLNDDLSI-----------AYQLFGKMLERDVVPDVDSYK 229
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
LI G C+ ++ A+EL +DM KG P+R +LI D + L +M +
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEM--I 283
Query: 344 NHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
+ G P S ++ C G+V EA + ++ G T+ +V +C E
Sbjct: 284 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 343
Query: 403 ----LLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPEIE 439
L D V E I R +V + K PEIE
Sbjct: 344 KIKLFLEDAVKEEITGDTR-------IVDVGIENKKMPEIE 377
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD AY L+ LC+ GN A L+E+ME G+ P + TY L+ C G L
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY--PSNTVTYNALVRGLCMLGSLNQSL 196
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
+ R ++ KG P+ TY+ L++ K A++L +++ KG PN
Sbjct: 197 QFVER-----------LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPN 245
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSF 372
V+Y+ L+ + D A+ + R++ G ++ SY ++ LC GR EA S
Sbjct: 246 LVSYNVLLTGFCKEGRTDDAMALFRELPA--KGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAG 399
L E+ G P TY ++ + L G
Sbjct: 304 LAEMDGGDRAPSVVTYNILINSLAFHG 330
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 14/235 (5%)
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
P T T L++ L G +++ R+ Q P+ Y+ L+ A + A
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
LL+++ + G P+ +Y +L++ +C+ G R +A LFR + KGF
Sbjct: 233 LLDEIIVKG--GEPNLVSYNVLLTGFCKEG-----------RTDDAMALFRELPAKGFKA 279
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
+VV+YN L+ C R + A L +M AP+ VTY+ LI + ++A++VL
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339
Query: 338 RDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
++M + NH +++SY P+I LC+ G+V L E++ P E TY +
Sbjct: 340 KEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+P++ L+Y LC+ +A ++E M G PDA YT L++ C+ G
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII--PDASAYTYLVNQLCKRG----- 155
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
+ A +L M G+ + VTYNAL+ G C + ++L+ E + +KG AP
Sbjct: 156 ------NVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAP 209
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
N TY L+ D AV++L ++ + G P+ SY ++ C+ GR +A +
Sbjct: 210 NAFTYSFLLEAAYKERGTDEAVKLLDEII-VKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAG 399
EL G +Y ++ LC G
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDG 295
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T L+ L ++G A +M+ + + YN L+ LC +G+ ++ +E++
Sbjct: 145 TYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQ 204
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G P+AFTY+ L+ + + R EA +L ++ KG P++V+YN
Sbjct: 205 KGL--APNAFTYSFLLEAAYKE-----------RGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
L+ G CK R A+ LF ++ KG N V+Y+ L+R + A +L +M +
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR--EYTYRLVCDKLCLAGEDG 402
PS +Y +I++L GR +A L E+ G + R +Y V +LC G+
Sbjct: 312 RA-PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVD 370
Query: 403 LLGDEVHERI 412
L+ + E I
Sbjct: 371 LVVKCLDEMI 380
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG 247
KQ C D Y ++I +LCR GN A LL +M GF PDA TY+ LI C G
Sbjct: 417 KQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGF--DPDAHTYSALIRGLCLEG 472
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
+ TG + L + + P V +NA+I G CK R A+E+FE M +
Sbjct: 473 MFTGAMEV----------LSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVE 522
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
K PN TY L+ + +E++ A EVL +++
Sbjct: 523 KKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 125/320 (39%), Gaps = 68/320 (21%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
++G +A F + + ++ +YN L+ LC G + A LL +M+ G P
Sbjct: 258 KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD--GGDRAPS 315
Query: 233 AFTYTILISSYCRHG-------ILTGCRKATRR-------------RLYEAGRL------ 266
TY ILI+S HG +L K + RL + G++
Sbjct: 316 VVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKC 375
Query: 267 FRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL--------------------------- 299
M+++ P+ TYNA+ C ++Q A
Sbjct: 376 LDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCR 435
Query: 300 --------ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
+L +M + G P+ TY +LIR A+EVL M+ + P+
Sbjct: 436 KGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVD 495
Query: 352 SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGL-LGDEVHE 410
++ +I LC+ R A +V+ +P E TY ++ + +A ED L L EV +
Sbjct: 496 NFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG--IAHEDELELAKEVLD 553
Query: 411 RIKNGMRKRYKQTMMVKPVM 430
++ +RK Q + + VM
Sbjct: 554 ELR--LRKVIGQNAVDRIVM 571
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G P+V L+ CK R+++A+ + E M G P+ Y L+ + A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 334 VEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
++++ M+ +HG PS++ +Y ++ LC G + ++ F+ L+ G P +TY +
Sbjct: 161 MQLVEKME--DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Query: 393 D 393
+
Sbjct: 219 E 219
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 122/295 (41%), Gaps = 56/295 (18%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T +I E G +A F +MK+ C+P +NTLI ++G + LL+
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M L P+ T IL+ ++C +R++ EA + M G PDVV
Sbjct: 449 MM-LRDEMLQPNDRTCNILVQAWC-----------NQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 281 TYNAL------------------------------------IDGCCKTYRIQRALELFED 304
T+N L ++G C+ +++ AL F
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 305 MKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEA 363
MK+ G PN ++SLI+ + N++D EV+ M+ G+ P +++ +++A
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF--GVKPDVVTFSTLMNAWSSV 614
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRK 418
G + ++++GG P + + ++ AGE E E+I N MRK
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE-----PEKAEQILNQMRK 664
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 18/279 (6%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G D VT +A R +T T + HN + N T TI + E+
Sbjct: 490 GVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTI---VNGYCEE 544
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
G EA FYRMK+ P++ +N+LI + + +++ ME F PD
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME--EFGVKPDVV 602
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
T++ L++++ G + C + ++ ML G PD+ ++ L G +
Sbjct: 603 TFSTLMNAWSSVGDMKRCEE-----------IYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 354
++A ++ M+K G PN V Y +I + + E+ +A++V + M + P+ ++Y
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYE 711
Query: 355 PIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+I EA + +A L ++ VP T +L+ D
Sbjct: 712 TLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 26/232 (11%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR----HGILT 250
D+R+ L+ L G A + + G P TYT L+++ R H +L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGH--KPSLITYTTLVTALTRQKHFHSLLS 375
Query: 251 GCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGC 310
K + G PD + +NA+I+ ++ + +A+++FE MK+ GC
Sbjct: 376 LISKVEKN---------------GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGC 420
Query: 311 APNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
P T+++LI+ Y +++ + +L M R P+ + ++ A C ++ EAW
Sbjct: 421 KPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAW 480
Query: 371 SFLVELVDGGNVPREYTYRLVCDKLCLAG-----EDGLLGDEVHERIKNGMR 417
+ + ++ G P T+ + G ED ++ +H ++K +R
Sbjct: 481 NIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 532
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 16/230 (6%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
++ + ++ LL L E F + D N LI LC GN A LL
Sbjct: 166 SSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLL 225
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ E P P+ T++ LI +C G + EA +L M + PD
Sbjct: 226 D--EFPQQKSRPNVMTFSPLIRGFCNKG-----------KFEEAFKLLERMEKERIEPDT 272
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+T+N LI G K R++ ++L E MK KGC PN TY ++ A E++
Sbjct: 273 ITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQ 332
Query: 340 MQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
M ++ G+ PS SY ++ LCE V E L ++V+ G VP+ +
Sbjct: 333 M--ISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 82/203 (40%), Gaps = 16/203 (7%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I + LIK L E G A Q RP++ ++ LI C G F A L
Sbjct: 200 IDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
LE+ME PD T+ ILIS + G R+ E L M KG P+
Sbjct: 260 LERMEKERI--EPDTITFNILISGLRKKG-----------RVEEGIDLLERMKVKGCEPN 306
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
TY ++ G R A E+ M G P+ ++Y ++ T + VLR
Sbjct: 307 PGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLR 366
Query: 339 DMQRLNHG-IPSSSSYTPIIHAL 360
M +NHG +P + + ++ +
Sbjct: 367 QM--VNHGFVPKTLMWWKVVQCV 387
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 22/279 (7%)
Query: 147 ANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYAL 206
A +H++ ++ T + +I G+ + E M+ R Y L
Sbjct: 81 AYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEV---MRTIKLEKRCRFSEEFFYNL 137
Query: 207 CRV-GNFA----RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLY 261
R+ GN A RA +L M P F C P + ++ +++ + K
Sbjct: 138 MRIYGNLAGRINRAIEILFGM--PDFGCWPSSKSFNFILNLLVSAKLFDEIHKI----FV 191
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
A +L G D N LI G C++ ++ AL+L ++ ++ PN +T+ LI
Sbjct: 192 SAPKL-------GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLI 244
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
R + + + A ++L M++ P + ++ +I L + GRV E L + G
Sbjct: 245 RGFCNKGKFEEAFKLLERMEK-ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Query: 382 VPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRY 420
P TY+ V L + + + + I GMR +
Sbjct: 304 EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 49/278 (17%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
+RN + LI+ G+ G +A F+++ + C I++ NTLI L G
Sbjct: 109 YRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELE 168
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAG-RLFRLMLF 272
+AK + + P++ ++ ILI G L C +EA ++F ML
Sbjct: 169 KAKSFFDGAK--DMRLRPNSVSFNILIK-----GFLDKCD-------WEAACKVFDEMLE 214
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
P VVTYN+LI C+ + +A L EDM KK PN VT+ L++ E +
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 333 AVEVLRDMQR-------LNHGI---------------------------PSSSSYTPIIH 358
A +++ DM+ +N+GI P Y +++
Sbjct: 275 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
LC RV EA+ L E+ G P TYR++ D C
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 28/247 (11%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ + LIK ++ A F M + +P + YN+LI LCR + +AK LL
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILT------------GCRKA------------ 255
E M P+A T+ +L+ C G GC+
Sbjct: 245 EDMIKKRIR--PNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
R R+ EA L M + PDVV YN L++ C R+ A + +M+ KGC PN
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
TY +I + + D + VL M H P+ +++ ++ L + G + A F++E
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRH-CPTPATFVCMVAGLIKGGNLDHA-CFVLE 420
Query: 376 LVDGGNV 382
++ N+
Sbjct: 421 VMGKKNL 427
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 14/222 (6%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA F++ ++ R D +Y++LIY L + NF +L + C F
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG-- 121
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI Y + G + +A +F + V + + N LI+ +++A
Sbjct: 122 LIQHYGKAGSVD-----------KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
F+ K PN V+++ LI+ + + + A +V +M + PS +Y +I
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQ-PSVVTYNSLIG 229
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
LC + +A S L +++ P T+ L+ LC GE
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
L+ LG++G EA L MK+ +PD+ YN L+ LC A +L +M++ G
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAG-RLFRLMLFKGFVPDVVTYNAL 285
C P+A TY ++I +CR +++G + ML P T+ +
Sbjct: 357 --CKPNAATYRMMIDGFCRI------------EDFDSGLNVLNAMLASRHCPTPATFVCM 402
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
+ G K + A + E M KK + + +L+
Sbjct: 403 VAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLL 438
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 160 TTATITCLIKLLGEQG--LASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
+++T CLI +L E+ EA+ TF M + PD + LC VGN AK
Sbjct: 747 SSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKS 806
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG--F 275
L+ + GF P Y+I I + CR G +L EA L L F+G
Sbjct: 807 CLDSLGKIGF---PVTVAYSIYIRALCRIG-----------KLEEA--LSELASFEGERS 850
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
+ D TY +++ G + +Q+AL+ MK+ G P Y SLI Y+ ++++ +E
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 336 VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+ M+ PS +YT +I G+V EAW+ + + G P TY + L
Sbjct: 911 TCQKMEG-ESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Query: 396 CLA--GEDGL 403
C A ED L
Sbjct: 970 CQACKSEDAL 979
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 131/354 (37%), Gaps = 71/354 (20%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
++ FF WV+ GF+H M + A + L + E ++ N + I T
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSI---AGEARNL-DMVDELVSEMEKNGCDKDIRTW 227
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
TI LI + G+ + L F +M++ D AYN +I +LC G A ++M
Sbjct: 228 TI--LISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM 285
Query: 223 ELPGF-----------------------------------WCPPDAFTYTILISSYCRHG 247
G DAF Y L+ S+C G
Sbjct: 286 MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY--LLKSFCVSG 343
Query: 248 ----ILTGCRKATRRRLYEAGRLFRLMLFKGF--------------------VPDVVTYN 283
L R+ + + + F + L KG + D Y
Sbjct: 344 KIKEALELIRELKNKEMCLDAKYFEI-LVKGLCRANRMVDALEIVDIMKRRKLDDSNVYG 402
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+I G + + +ALE FE +KK G P TY ++++ + ++ + +M +
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEM--I 460
Query: 344 NHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+GI P S + T ++ RVAEAW + + G P +Y + +LC
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR 258
YNT++ N L+ +ME G C D T+TILIS Y + +
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNG--CDKDIRTWTILISVYGKA-----------K 238
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
++ + +F M GF D YN +I C R ALE +++M +KG TY
Sbjct: 239 KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYK 298
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
L+ + + ++D + DM R+ I ++ ++ + C +G++ EA + EL +
Sbjct: 299 MLLDCIAKSEKVDVVQSIADDMVRICE-ISEHDAFGYLLKSFCVSGKIKEALELIRELKN 357
Query: 379 GGNVPREYTYRLVCDKLCLA 398
+ ++ LC A
Sbjct: 358 KEMCLDAKYFEILVKGLCRA 377
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
MK+ +P + Y +LI + + ++ME G C P TYT +I Y
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME--GESCEPSVVTYTAMICGYMSL 937
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
G ++ EA FR M +G PD TY+ I+ C+ + + AL+L +M
Sbjct: 938 G-----------KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEML 986
Query: 307 KKGCAPNRVTY 317
KG AP+ + +
Sbjct: 987 DKGIAPSTINF 997
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 17/235 (7%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
L+K G EA +K D + + L+ LCR A +++ M+
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK 394
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
D+ Y I+IS Y R ++ +A F ++ G P V TY ++
Sbjct: 395 L---DDSNVYGIIISGYLRQNDVS-----------KALEQFEVIKKSGRPPRVSTYTEIM 440
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
K + ++ LF +M + G P+ V +++ + N + A +V M+ G
Sbjct: 441 QHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSME--EKG 498
Query: 347 I-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
I P+ SY+ + LC + R E ++ V R+ + V + GE
Sbjct: 499 IKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 17/193 (8%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
AYN I +F + + L +M G D T+ I+I Y R G LT
Sbjct: 680 AYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQD--TWAIMIMQYGRTG-LTNI----- 731
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC--KTYRIQRALELFEDMKKKGCAPNRV 315
A R F+ M G +P T+ LI C K ++ A F +M + G P+R
Sbjct: 732 -----AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRE 786
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
+ A L + ++ G P + +Y+ I ALC G++ EA S L
Sbjct: 787 LVQDYLGCLCEVGNTKDAKSCLDSLGKI--GFPVTVAYSIYIRALCRIGKLEEALSELAS 844
Query: 376 LVDGGNVPREYTY 388
++ +YTY
Sbjct: 845 FEGERSLLDQYTY 857
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
GF V YN ++ + + EL +M+K GC + T+ LI Y +I +
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ V M++ + +++Y +I +LC AGR A F E+++ G TY+++ D
Sbjct: 244 LLVFEKMRKSGFEL-DATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 394 KLCLA 398
C+A
Sbjct: 303 --CIA 305
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
M Q CRPD NT+I LC++G A +L+ M + G +C PDA T ++
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM-MTGKFCAPDAVTLNTVMCGLLAQ 496
Query: 247 GILTGCRKATRRRLYEA-GRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G R EA L R+M P VV YNA+I G K ++ A+ +F +
Sbjct: 497 G-----------RAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL 545
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
+K + TY +I TN++D A + D+ G + Y + LC++G
Sbjct: 546 EKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI-WPSGRHDAFVYAAFLKGLCQSGY 604
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLV 391
+++A FL +L D G +P Y V
Sbjct: 605 LSDACHFLYDLADSGAIPNVVCYNTV 630
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD--AFTYTILISSYCRHGILTGCRKA 255
A+ L+ ++CR G F + E M L C F Y +I S CR+
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSL----CESVNVEFAYGHMIDSLCRY--------- 320
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
RR + A R+ +M KG P +YNA+I G CK RA +L E+ + P+
Sbjct: 321 --RRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEY 378
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
TY L+ + +A VL M R G + Y + LC E + LV
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLR-KEGADRTRIYNIYLRGLCVMDNPTEILNVLVS 437
Query: 376 LVDGGNVPREYTYRLVCDKLCLAG 399
++ G P EYT V + LC G
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMG 461
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 13/194 (6%)
Query: 180 ASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
A+ Y MK +P +YN +I+ LC+ G RA LLE+ F+ P +TY +L
Sbjct: 326 AARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFF--PSEYTYKLL 383
Query: 240 ISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
+ S C+ + TG +A + LML K YN + G C L
Sbjct: 384 MESLCKE-LDTG----------KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEIL 432
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHA 359
+ M + C P+ T +++I +D A++VL DM P + + ++
Sbjct: 433 NVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCG 492
Query: 360 LCEAGRVAEAWSFL 373
L GR EA L
Sbjct: 493 LLAQGRAEEALDVL 506
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 29/193 (15%)
Query: 193 RPDIRAYNTLIYALCRVGNFARA--KFLLEQMELPGFWCPPDAFTYTILISS--YCRHGI 248
RPD +++I++LC G F A +FLL GF PD T ++I+ Y R +
Sbjct: 87 RPDSLNLSSVIHSLCDAGRFDEAHRRFLL--FLASGFI--PDERTCNVIIARLLYSRSPV 142
Query: 249 LTGCRKATRRRLYEAGRLFRLMLFKG-FVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
T G + RL+ FK FVP + YN L++ C YR+ A +L DM+
Sbjct: 143 ST------------LGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRN 190
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHAL-----CE 362
+G P+ VT+ +LI Y E++ A +V +M R+ P+S + + +I E
Sbjct: 191 RGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEM-RVCGIRPNSLTLSVLIGGFLKMRDVE 249
Query: 363 AGR--VAEAWSFL 373
GR + E W ++
Sbjct: 250 TGRKLMKELWEYM 262
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 177 ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
EA F ++++ D Y +I LC AK + + P DAF Y
Sbjct: 535 GDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPS--GRHDAFVY 592
Query: 237 TILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
+ C+ G L+ +A + G +P+VV YN +I C ++ +
Sbjct: 593 AAFLKGLCQSGYLS-----------DACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKR 641
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATN 328
A ++ E+M+K G AP+ VT+ L + + + +
Sbjct: 642 EAYQILEEMRKNGQAPDAVTWRILDKLHDSMD 673
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 101/244 (41%), Gaps = 54/244 (22%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P + ++N LI LC VG+ A A L M G PD+ TY IL + G+++G
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGV--EPDSVTYNILAKGFHLLGMISG-- 310
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI--------------------------- 286
A + R ML KG PDV+TY L+
Sbjct: 311 ---------AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 287 ---------DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
G CKT RI AL LF MK G +P+ V Y +I + D A+ +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 338 RDM--QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+M +R+ +P+S ++ ++ LC+ G + EA S L L+ G Y +V D
Sbjct: 422 DEMCDKRI---LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 396 CLAG 399
+G
Sbjct: 479 AKSG 482
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 162 ATITCLIKLLG--EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ I C + L G + G EA F +MK PD+ AY+ +I+ LC++G F A +L
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 220 EQMELPGFWCP----PDAFTYTILISSYCRHGILTGCRK--------------------- 254
++M C P++ T+ L+ C+ G+L R
Sbjct: 422 DEM------CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 255 ---ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
A + EA LF++++ G P V T+N+LI G CKT I A ++ + +K G A
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALC 361
P+ V+Y +L+ Y+ E+ R+M+ GI P++ +Y+ I LC
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKA--EGIPPTNVTYSVIFKGLC 584
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 118/285 (41%), Gaps = 33/285 (11%)
Query: 121 VTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEA 180
V+ + VL T +W KE +K N H + + L +Q L E
Sbjct: 157 VSTQSYNSVLYHFRETDKMWDVYKEIKDK--NEHTYSTVVDG-------LCRQQKL--ED 205
Query: 181 SLTFYRMKQYH-CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
++ F R ++ P + ++N+++ C++G AK + G P +++ IL
Sbjct: 206 AVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGL--VPSVYSHNIL 263
Query: 240 ISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
I+ C G + EA L M G PD VTYN L G I A
Sbjct: 264 INGLCLVG-----------SIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ----RLNHGIPSSSSYTP 355
E+ DM KG +P+ +TY L+ ID + +L+DM LN IP S
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS----V 368
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ LC+ GR+ EA S ++ G P Y +V LC G+
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 26/256 (10%)
Query: 172 GEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPP 231
+ G EA F + + P + +N+LIY C+ N A A+ +L+ ++L G P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--AP 536
Query: 232 DAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK 291
+YT L+ +Y G L R M +G P VTY+ + G C+
Sbjct: 537 SVVSYTTLMDAYANCG-----------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 292 TYR------------IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
++ ++ + DM+ +G P+++TY+++I+Y + A L
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M+ N SS++Y +I +LC G + +A SF+ L + ++ Y + C+ G
Sbjct: 646 MKSRNLD-ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704
Query: 400 EDGLLGDEVHERIKNG 415
+ + H+ + G
Sbjct: 705 DPEMAVKLFHQLLHRG 720
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 97/238 (40%), Gaps = 4/238 (1%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ AT LI + +EA +K Y P + +Y TL+ A GN L
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRL-FRLMLFKGFVPD 278
+M+ G PP TY+++ CR C R R++E + R M +G PD
Sbjct: 562 REMKAEGI--PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+TYN +I C+ + A E MK + + TY+ LI I +A +
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+Q N + S +YT +I A C G A +L+ G Y V ++LC
Sbjct: 680 SLQEQNVSL-SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 101/244 (41%), Gaps = 54/244 (22%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P + ++N LI LC VG+ A A L M G PD+ TY IL + G+++G
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGV--EPDSVTYNILAKGFHLLGMISG-- 310
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI--------------------------- 286
A + R ML KG PDV+TY L+
Sbjct: 311 ---------AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 287 ---------DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
G CKT RI AL LF MK G +P+ V Y +I + D A+ +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 338 RDM--QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
+M +R+ +P+S ++ ++ LC+ G + EA S L L+ G Y +V D
Sbjct: 422 DEMCDKRI---LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 396 CLAG 399
+G
Sbjct: 479 AKSG 482
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 162 ATITCLIKLLG--EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ I C + L G + G EA F +MK PD+ AY+ +I+ LC++G F A +L
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 220 EQMELPGFWCP----PDAFTYTILISSYCRHGILTGCRK--------------------- 254
++M C P++ T+ L+ C+ G+L R
Sbjct: 422 DEM------CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 255 ---ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
A + EA LF++++ G P V T+N+LI G CKT I A ++ + +K G A
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALC 361
P+ V+Y +L+ Y+ E+ R+M+ GI P++ +Y+ I LC
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKA--EGIPPTNVTYSVIFKGLC 584
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 118/285 (41%), Gaps = 33/285 (11%)
Query: 121 VTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEA 180
V+ + VL T +W KE +K N H + + L +Q L E
Sbjct: 157 VSTQSYNSVLYHFRETDKMWDVYKEIKDK--NEHTYSTVVDG-------LCRQQKL--ED 205
Query: 181 SLTFYRMKQYH-CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
++ F R ++ P + ++N+++ C++G AK + G P +++ IL
Sbjct: 206 AVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGL--VPSVYSHNIL 263
Query: 240 ISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
I+ C G + EA L M G PD VTYN L G I A
Sbjct: 264 INGLCLVG-----------SIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ----RLNHGIPSSSSYTP 355
E+ DM KG +P+ +TY L+ ID + +L+DM LN IP S
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS----V 368
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
++ LC+ GR+ EA S ++ G P Y +V LC G+
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 26/256 (10%)
Query: 172 GEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPP 231
+ G EA F + + P + +N+LIY C+ N A A+ +L+ ++L G P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--AP 536
Query: 232 DAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK 291
+YT L+ +Y G L R M +G P VTY+ + G C+
Sbjct: 537 SVVSYTTLMDAYANCG-----------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 292 TYR------------IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
++ ++ + DM+ +G P+++TY+++I+Y + A L
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M+ N SS++Y +I +LC G + +A SF+ L + ++ Y + C+ G
Sbjct: 646 MKSRNLD-ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704
Query: 400 EDGLLGDEVHERIKNG 415
+ + H+ + G
Sbjct: 705 DPEMAVKLFHQLLHRG 720
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 97/238 (40%), Gaps = 4/238 (1%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+ AT LI + +EA +K Y P + +Y TL+ A GN L
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRL-FRLMLFKGFVPD 278
+M+ G PP TY+++ CR C R R++E + R M +G PD
Sbjct: 562 REMKAEGI--PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+TYN +I C+ + A E MK + + TY+ LI I +A +
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+Q N + S +YT +I A C G A +L+ G Y V ++LC
Sbjct: 680 SLQEQNVSL-SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 14/254 (5%)
Query: 130 LVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQ 189
L+ A + W E K +N + T I G Q S+A F MK
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ--YSKALSYFELMKG 276
Query: 190 YHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGIL 249
RPD +N +IY L ++G ++A L M C PD T+T ++ Y G +
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 250 TGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG 309
CR +F M+ +G P++V+YNAL+ AL + D+K+ G
Sbjct: 337 ENCRA-----------VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 310 CAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
P+ V+Y L+ Y + + +A EV M R P+ +Y +I A G +AEA
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 370 WSFLVELVDGGNVP 383
++ G P
Sbjct: 445 VEIFRQMEQDGIKP 458
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I+L +A F+ M+++ C+PD Y+ LI A R G + A L++ M
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 227 FWCPPDAFTYTILISSYCRHG----ILTGCRKATRRRL-------------YEAGR---- 265
P TY LI++ G L C+K T + Y++GR
Sbjct: 209 I--APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 266 ---LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK--GCAPNRVTYDSL 320
F LM PD T+N +I K + +AL+LF M++K C P+ VT+ S+
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
+ YS EI+ V M + G+ P+ SY ++ A G A S L ++
Sbjct: 327 MHLYSVKGEIENCRAVFEAM--VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 380 GNVPREYTY 388
G +P +Y
Sbjct: 385 GIIPDVVSY 393
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 49/253 (19%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T ++ L +G F M +P+I +YN L+ A G A +L
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ G PD +YT L++SY R R+ +A +F +M + P+VV
Sbjct: 380 DIKQNGI--IPDVVSYTCLLNSYGRS-----------RQPGKAKEVFLMMRKERRKPNVV 426
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT------------------------ 316
TYNALID + A+E+F M++ G PN V+
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 317 -----------YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
Y+S I Y E+++A+ + + M R S ++T +I C +
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSVTFTILISGSCRMSK 545
Query: 366 VAEAWSFLVELVD 378
EA S+L E+ D
Sbjct: 546 YPEAISYLKEMED 558
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 27/247 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+ TCL+ G +A F M++ +P++ YN LI A G A A +
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 221 QMELPGFWCPPDAFTYTILISSYCRH----GILTGCRKATRR------------------ 258
QME G P+ + L+++ R + T A R
Sbjct: 450 QMEQDGI--KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 259 --RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
L +A L++ M K D VT+ LI G C+ + A+ ++M+ +
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y S++ YS ++ A + M ++ P +YT ++HA + + +A +E+
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 377 VDGGNVP 383
G P
Sbjct: 627 EANGIEP 633
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 179 EASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
E ++ Y+ M++ + D + LI CR+ + A L++ME P Y+
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME--DLSIPLTKEVYS 569
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++ +Y + G +T EA +F M G PDV+ Y +++ + + +
Sbjct: 570 SVLCAYSKQGQVT-----------EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
A ELF +M+ G P+ + +L+R ++ + V VL D+ R IP + + I
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN-VFVLMDLMR-EKEIPFTGAVFFEI 676
Query: 358 HALCEAGRVAEAWSFLVELV 377
+ C + W ++L+
Sbjct: 677 FSAC---NTLQEWKRAIDLI 693
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 209 VGNFARAKFLLEQMELPGFWCPP---DAFTYTILISSYC-RHGILTGCRKATRRRLY--E 262
VG FAR F + EL C + F + + +YC R+ I + R + +
Sbjct: 102 VGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQ 161
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
A LF M PD TY+ALI+ + + + A+ L +DM + AP+R TY++LI
Sbjct: 162 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 221
Query: 323 YYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
++ A+EV + M ++G+ P ++ ++ A + ++A S+ EL+ G
Sbjct: 222 ACGSSGNWREALEVCKKMT--DNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAK 278
Query: 382 V-PREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKR 419
V P T+ ++ L G+ D + N MR++
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALD-----LFNSMREK 312
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 14/254 (5%)
Query: 130 LVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQ 189
L+ A + W E K +N + T I G Q S+A F MK
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ--YSKALSYFELMKG 144
Query: 190 YHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGIL 249
RPD +N +IY L ++G ++A L M C PD T+T ++ Y G +
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 250 TGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG 309
CR +F M+ +G P++V+YNAL+ AL + D+K+ G
Sbjct: 205 ENCRA-----------VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 310 CAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
P+ V+Y L+ Y + + +A EV M R P+ +Y +I A G +AEA
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 370 WSFLVELVDGGNVP 383
++ G P
Sbjct: 313 VEIFRQMEQDGIKP 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I+L +A F+ M+++ C+PD Y+ LI A R G + A L++ M
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 227 FWCPPDAFTYTILISSYCRHG----ILTGCRKATRRRL-------------YEAGR---- 265
P TY LI++ G L C+K T + Y++GR
Sbjct: 77 I--APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 266 ---LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK--GCAPNRVTYDSL 320
F LM PD T+N +I K + +AL+LF M++K C P+ VT+ S+
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
+ YS EI+ V M + G+ P+ SY ++ A G A S L ++
Sbjct: 195 MHLYSVKGEIENCRAVFEAM--VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 380 GNVPREYTY 388
G +P +Y
Sbjct: 253 GIIPDVVSY 261
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 118/292 (40%), Gaps = 54/292 (18%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T ++ L +G F M +P+I +YN L+ A G A +L
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
++ G PD +YT L++SY R R+ +A +F +M + P+VV
Sbjct: 248 DIKQNGI--IPDVVSYTCLLNSYGRS-----------RQPGKAKEVFLMMRKERRKPNVV 294
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT------------------------ 316
TYNALID + A+E+F M++ G PN V+
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 317 -----------YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
Y+S I Y E+++A+ + + M R S ++T +I C +
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSVTFTILISGSCRMSK 413
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
EA S+L E+ D ++P T + LC + G + + E I N M+
Sbjct: 414 YPEAISYLKEMED-LSIP--LTKEVYSSVLCAYSKQGQVTEA--ESIFNQMK 460
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG 247
K Y R DI YN +I R +A+ L E+ + C PDA TY LI+++ R G
Sbjct: 5 KNYCARNDI--YNMMIRLHARHNWVDQARGLF--FEMQKWSCKPDAETYDALINAHGRAG 60
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
+ A L ML P TYN LI+ C + + ALE+ + M
Sbjct: 61 -----------QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD 109
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
G P+ VT++ ++ Y + + +A+ M+ P ++++ II+ L + G+ +
Sbjct: 110 NGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVR-PDTTTFNIIIYCLSKLGQSS 168
Query: 368 EA 369
+A
Sbjct: 169 QA 170
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 27/243 (11%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
TCL+ G +A F M++ +P++ YN LI A G A A + QME
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 225 PGFWCPPDAFTYTILISSYCRH----GILTGCRKATRR--------------------RL 260
G P+ + L+++ R + T A R L
Sbjct: 322 DGI--KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 261 YEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
+A L++ M K D VT+ LI G C+ + A+ ++M+ + Y S+
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ YS ++ A + M ++ P +YT ++HA + + +A +E+ G
Sbjct: 440 LCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 381 NVP 383
P
Sbjct: 499 IEP 501
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 179 EASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
E ++ Y+ M++ + D + LI CR+ + A L++ME P Y+
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME--DLSIPLTKEVYS 437
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++ +Y + G +T EA +F M G PDV+ Y +++ + + +
Sbjct: 438 SVLCAYSKQGQVT-----------EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
A ELF +M+ G P+ + +L+R ++ + V VL D+ R IP + + I
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN-VFVLMDLMR-EKEIPFTGAVFFEI 544
Query: 358 HALCEAGRVAEAWSFLVELV 377
+ C + W ++L+
Sbjct: 545 FSAC---NTLQEWKRAIDLI 561
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YN +I + + +A LF +M+K C P+ TYD+LI + + A+ ++ DM
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
R PS S+Y +I+A +G EA ++ D G P T+ +V
Sbjct: 74 RAAIA-PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 145 ETANKHHNNHRNNPITTATIT--CLIKLLGEQGLASEASLT-FYRMKQYHCRPDIRAYNT 201
ET+ + + +N I+ + +T +I GL E L F M+ +PDI YNT
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 202 LIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLY 261
L+ A G A+ + M G PD TY+ L+ ++ + RRL
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGI--VPDLTTYSHLVETFGK-----------LRRLE 299
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
+ L M G +PD+ +YN L++ K+ I+ A+ +F M+ GC PN TY L+
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
+ + D ++ +M+ N P +++Y +I E G E + ++V+
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTD-PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 382 VPREYTYR 389
P TY
Sbjct: 419 EPDMETYE 426
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T +I LLG +GL + F M + +Y LI A R G + + LL++M+
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 225 PGFWCPPDAFTYTILISSYCRHG---------------------------ILTGCRKATR 257
P TY +I++ R G +L+ C A R
Sbjct: 205 EKI--SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC--AIR 260
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
EA +FR M G VPD+ TY+ L++ K R+++ +L +M G P+ +Y
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+ L+ Y+ + I A+ V MQ P++++Y+ +++ ++GR + +E+
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGC-TPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 378 DGGNVPREYTYRLVCDKLCLAGEDG-------LLGDEVHERIKNGMR 417
P TY ++ + + GE G L D V E I+ M
Sbjct: 380 SSNTDPDAATYNILIE---VFGEGGYFKEVVTLFHDMVEENIEPDME 423
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 210 GNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRL 269
G++ R+ L + M+ WC P+ YTI+IS R G+L C + +F
Sbjct: 119 GDWQRSLRLFKYMQRQ-IWCKPNEHIYTIMISLLGREGLLDKCLE-----------VFDE 166
Query: 270 MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATN- 328
M +G V +Y ALI+ + R + +LEL + MK + +P+ +TY+++I +
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 329 EIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
+ + + + +M+ + GI P +Y ++ A G EA + DGG VP T
Sbjct: 227 DWEGLLGLFAEMR--HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 388 Y 388
Y
Sbjct: 285 Y 285
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
N AT LI++ GE G E F+ M + + PD+ Y +I+A + G A
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRL-FRLMLFKG 274
+ +L+ M P + YT +I ++ + LYE + F M G
Sbjct: 442 RKILQYMTANDI--VPSSKAYTGVIEAFGQAA------------LYEEALVAFNTMHEVG 487
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
P + T+++L+ + ++ + + + G NR T+++ I Y + + AV
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 335 EVLRDMQR 342
+ DM++
Sbjct: 548 KTYVDMEK 555
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
+ + RP+I Y++ + +C G+ RA + +++ G PD YT +I YC
Sbjct: 364 IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL--PDCVCYTTMIDGYCNL 421
Query: 247 G-------------------------ILTG-CRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
G IL G C + + +A +FR M +G DVV
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS--ISDAESVFRNMKTEGLKLDVV 479
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN L+ G KT+++ + EL ++M+ G +P+ TY+ LI ID A E++ ++
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEA---WSFLVEL 376
R +PS+ ++T +I + G EA W ++ +L
Sbjct: 540 IRRGF-VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 116/304 (38%), Gaps = 79/304 (25%)
Query: 151 HNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
H R + A ++ I+ G + MK Y RPDI A+ I LC+ G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 211 NFARAKFLLEQMELPG------------------------------FWCPPDAFTYTILI 240
A +L +++L G F P+ F Y+ +
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFL 380
Query: 241 SSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALE 300
S+ C G + A +F+ + G +PD V Y +IDG C R +A +
Sbjct: 381 SNICSTG-----------DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 301 -----------------------------------LFEDMKKKGCAPNRVTYDSLIRYYS 325
+F +MK +G + VTY++L+ Y
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 326 ATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
T+++++ E++ +M+ + GI P ++Y +IH++ G + EA + EL+ G VP
Sbjct: 490 KTHQLNKVFELIDEMR--SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 385 EYTY 388
+
Sbjct: 548 TLAF 551
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
NP + T T LI G S+A F MK + D+ YN L++ + +
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
L+++M G PD TY ILI S G + EA + ++ +GF
Sbjct: 498 FELIDEMRSAGI--SPDVATYNILIHSMVVRGYID-----------EANEIISELIRRGF 544
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
VP + + +I G K Q A L+ M P+ VT +L+ Y +++A+
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 336 VLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ + L+ G+ P Y +IH C G + +A + +V G +P E T+
Sbjct: 605 LFNKL--LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 125/331 (37%), Gaps = 70/331 (21%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANAT------------------KTLWGFLKE 145
L FFRW E G H + M +LV N ++L +K+
Sbjct: 130 LYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKD 189
Query: 146 TANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYA 205
+ + + I C I+ E+ + LT Y++ Q+ P +L+
Sbjct: 190 LFETRIDRRVLETVFSILIDCCIR---ERKVNMALKLT-YKVDQFGIFPSRGVCISLLKE 245
Query: 206 LCRVGNFARAKFLLEQMELPG---------------------------------FWCPPD 232
+ RV A+ +E M G + PD
Sbjct: 246 ILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD 305
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
+T+ I C+ G L ++AT LF+L LF G D V+ +++IDG CK
Sbjct: 306 IVAFTVFIDKLCKAGFL---KEAT-------SVLFKLKLF-GISQDSVSVSSVIDGFCKV 354
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
+ + A++L + + PN Y S + +T ++ RA + +++ L +P
Sbjct: 355 GKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDCVC 410
Query: 353 YTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
YT +I C GR +A+ + L+ GN P
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
+ + RP+I Y++ + +C G+ RA + +++ G PD YT +I YC
Sbjct: 364 IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL--PDCVCYTTMIDGYCNL 421
Query: 247 G-------------------------ILTG-CRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
G IL G C + + +A +FR M +G DVV
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS--ISDAESVFRNMKTEGLKLDVV 479
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN L+ G KT+++ + EL ++M+ G +P+ TY+ LI ID A E++ ++
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEA---WSFLVEL 376
R +PS+ ++T +I + G EA W ++ +L
Sbjct: 540 IRRGF-VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 116/304 (38%), Gaps = 79/304 (25%)
Query: 151 HNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
H R + A ++ I+ G + MK Y RPDI A+ I LC+ G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 211 NFARAKFLLEQMELPG------------------------------FWCPPDAFTYTILI 240
A +L +++L G F P+ F Y+ +
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFL 380
Query: 241 SSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALE 300
S+ C G + A +F+ + G +PD V Y +IDG C R +A +
Sbjct: 381 SNICSTG-----------DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 301 -----------------------------------LFEDMKKKGCAPNRVTYDSLIRYYS 325
+F +MK +G + VTY++L+ Y
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 326 ATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPR 384
T+++++ E++ +M+ + GI P ++Y +IH++ G + EA + EL+ G VP
Sbjct: 490 KTHQLNKVFELIDEMR--SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 385 EYTY 388
+
Sbjct: 548 TLAF 551
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
NP + T T LI G S+A F MK + D+ YN L++ + +
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
L+++M G PD TY ILI S G + EA + ++ +GF
Sbjct: 498 FELIDEMRSAGI--SPDVATYNILIHSMVVRGYID-----------EANEIISELIRRGF 544
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
VP + + +I G K Q A L+ M P+ VT +L+ Y +++A+
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 336 VLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ + L+ G+ P Y +IH C G + +A + +V G +P E T+
Sbjct: 605 LFNKL--LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 125/331 (37%), Gaps = 70/331 (21%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANAT------------------KTLWGFLKE 145
L FFRW E G H + M +LV N ++L +K+
Sbjct: 130 LYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKD 189
Query: 146 TANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYA 205
+ + + I C I+ E+ + LT Y++ Q+ P +L+
Sbjct: 190 LFETRIDRRVLETVFSILIDCCIR---ERKVNMALKLT-YKVDQFGIFPSRGVCISLLKE 245
Query: 206 LCRVGNFARAKFLLEQMELPG---------------------------------FWCPPD 232
+ RV A+ +E M G + PD
Sbjct: 246 ILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD 305
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
+T+ I C+ G L ++AT LF+L LF G D V+ +++IDG CK
Sbjct: 306 IVAFTVFIDKLCKAGFL---KEAT-------SVLFKLKLF-GISQDSVSVSSVIDGFCKV 354
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
+ + A++L + + PN Y S + +T ++ RA + +++ L +P
Sbjct: 355 GKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDCVC 410
Query: 353 YTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
YT +I C GR +A+ + L+ GN P
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 22/282 (7%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G + VTC + ++A W KE ++ R I CLI+ L +
Sbjct: 175 GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSER--------IRCLIRALCDG 226
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
G SE + + P Y LI C +GN+A +L M + P +
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF--PSMY 284
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
Y +I C + ++ EA +F+ + KG+ PD V Y +I G C+
Sbjct: 285 IYQKIIKGLCMN-----------KKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 354
+ A +L+ +M KKG PN Y+ +I + EI +M R +G S T
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393
Query: 355 PIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+I C G+ EA+ + + G P TY + C
Sbjct: 394 -MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC 434
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T +I+ E+G A ++ M + RP+ AYN +I+ + G + + +M
Sbjct: 322 TTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR 381
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G+ + +I +C HG + EA +F+ M G P+ +TYNA
Sbjct: 382 NGY--GGTMLSCNTMIKGFCSHG-----------KSDEAFEIFKNMSETGVTPNAITYNA 428
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
LI G CK ++++ L+L++++K G P+ + Y +L+R ++ + ++ +
Sbjct: 429 LIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 126/356 (35%), Gaps = 81/356 (22%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKH------------ 150
SL FFRW+ ++ +T V+ + L+ A K FL T K
Sbjct: 96 SLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCL 155
Query: 151 ------------HNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRM--KQYHCRPDI 196
+N ++ I+++ +TC LLG L + F+ + + D
Sbjct: 156 SEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLG--CLKARKLDRFWELHKEMVESEFDS 213
Query: 197 RAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKAT 256
LI ALC G+ + LL+Q G P + Y LIS +C G C
Sbjct: 214 ERIRCLIRALCDGGDVSEGYELLKQGLKQGL--DPGQYVYAKLISGFCEIGNY-AC---- 266
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
+ M+ P + Y +I G C + A +F+++K KG AP+RV
Sbjct: 267 ------MSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVV 320
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y T +I CE G + A E+
Sbjct: 321 Y------------------------------------TTMIRGFCEKGWLGSARKLWFEM 344
Query: 377 VDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTR 432
+ G P E+ Y ++ GE L+ +E ++NG Y TM+ M +
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG----YGGTMLSCNTMIK 396
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA + F M + PD+ Y +I+ CR+ +A+ L E M+ G PD TYT+
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI--KPDVVTYTV 666
Query: 239 LISSYCR-----HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTY 293
L+ Y + H + + +R+ E R F G DVV Y LID CK
Sbjct: 667 LLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA---AGIGLDVVCYTVLIDRQCKMN 723
Query: 294 RIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSY 353
+++A ELF+ M G P+ V Y +LI Y ID AV ++ ++ + + IPS S
Sbjct: 724 NLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSK-KYNIPSESFE 782
Query: 354 TPIIHALCEAGR 365
+ A +A R
Sbjct: 783 AAVKSAALKAKR 794
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
E GL+ +A F R+ +Y R + Y L ++LC G +A +L++M + P
Sbjct: 536 EAGLSKKAYKAFVRL-EYPLRKSV--YIKLFFSLCIEGYLEKAHDVLKKM--SAYRVEPG 590
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
+I ++C+ L R EA LF M+ +G +PD+ TY +I C+
Sbjct: 591 RSMCGKMIGAFCK---LNNVR--------EAQVLFDTMVERGLIPDLFTYTIMIHTYCRL 639
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYY-----------SATNEID--RAVEVLRD 339
+Q+A LFEDMK++G P+ VTY L+ Y S E+ +A EVLR+
Sbjct: 640 NELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLRE 699
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
G+ YT +I C+ + +A ++D G P Y
Sbjct: 700 FSAAGIGL-DVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAY 747
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 174 QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDA 233
+G +A +M Y P +I A C++ N A+ L + M G PD
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI--PDL 626
Query: 234 FTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK-- 291
FTYTI+I +YCR L +A LF M +G PDVVTY L+D K
Sbjct: 627 FTYTIMIHTYCRLN-----------ELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 292 -----TYRIQ------RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
T +Q +A E+ + G + V Y LI N +++A E+ M
Sbjct: 676 PEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
Query: 341 QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
++ G+ P +YT +I + G + A + + EL N+P E
Sbjct: 736 --IDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE 779
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 96/237 (40%), Gaps = 24/237 (10%)
Query: 140 WGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAY 199
GFL + K N I + + C K+ + EA F + + D Y
Sbjct: 338 LGFLDKMLGKGL--KVNCVIVSLILQCYCKM----DMCLEALEKFKEFRDMNIFLDRVCY 391
Query: 200 NTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR 259
N AL ++G A LL++M+ G PD YT LI YC G +
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIV--PDVINYTTLIDGYCLQG-----------K 438
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
+ +A L M+ G PD++TYN L+ G + + LE++E MK +G PN VT
Sbjct: 439 VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSV 498
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+I ++ A + L P + + + CEAG +A+ V L
Sbjct: 499 IIEGLCFARKVKEAEDFF---SSLEQKCPENKA--SFVKGYCEAGLSKKAYKAFVRL 550
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 131/353 (37%), Gaps = 63/353 (17%)
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTL 202
L E + + + + L+K G+ EA+ ++ K+ C DI+A N L
Sbjct: 128 LIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFL 187
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGIL------------- 249
+ + G L +Q++ G + +TY I++ + CR G L
Sbjct: 188 MNRMTEFGKIGMLMTLFKQLKQLGLC--ANEYTYAIVVKALCRKGNLEEAAMLLIENESV 245
Query: 250 ------------TG-CRKATR------RRLYEAGRLFRL---MLFKGFVP---------- 277
TG KA R Y AG R M+ +GF
Sbjct: 246 FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESV 305
Query: 278 -----------DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSA 326
DV A+ID CK + AL + M KG N V +++ Y
Sbjct: 306 IIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK 365
Query: 327 TNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREY 386
+ A+E ++ + +N + Y AL + GRV EA+ L E+ D G VP
Sbjct: 366 MDMCLEALEKFKEFRDMNIFL-DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVI 424
Query: 387 TYRLVCDKLCLAGE--DGLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPE 437
Y + D CL G+ D L D + E I NGM ++ + R G+ E
Sbjct: 425 NYTTLIDGYCLQGKVVDAL--DLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 44/255 (17%)
Query: 171 LGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP 230
L + G EA MK PD+ Y TLI C G A L+++M G
Sbjct: 398 LSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEM--IGNGMS 455
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD TY +L+S R+G E ++ M +G P+ VT + +I+G C
Sbjct: 456 PDLITYNVLVSGLARNG-----------HEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVT--------------YDSLIR-------------Y 323
+++ A + F +++K C N+ + Y + +R +
Sbjct: 505 FARKVKEAEDFFSSLEQK-CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLF 563
Query: 324 YSATNE--IDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
+S E +++A +VL+ M P S +I A C+ V EA +V+ G
Sbjct: 564 FSLCIEGYLEKAHDVLKKMSAYRVE-PGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Query: 382 VPREYTYRLVCDKLC 396
+P +TY ++ C
Sbjct: 623 IPDLFTYTIMIHTYC 637
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 270 MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNE 329
ML P +TYN++IDG CK R+ A + + M KGC+P+ VT+ +LI Y
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 330 IDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+D +E+ +M R GI +++ +YT +IH C+ G + A L E++ G P T+
Sbjct: 61 VDNGMEIFCEMHR--RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
Query: 389 RLVCDKLCLAGE 400
+ LC E
Sbjct: 119 HCMLAGLCSKKE 130
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 14/147 (9%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P TY +I +C+ + R+ +A R+ M KG PDVVT++ LI+G C
Sbjct: 8 PTTITYNSMIDGFCK-----------QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC 56
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
K R+ +E+F +M ++G N VTY +LI + ++D A ++L +M ++ G+ P
Sbjct: 57 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM--ISCGVAPD 114
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVEL 376
++ ++ LC + +A++ L +L
Sbjct: 115 YITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
M ++ P YN++I C+ AK +L+ M G C PD T++ LI+ YC+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG--CSPDVVTFSTLINGYCK- 57
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
+R+ +F M +G V + VTY LI G C+ + A +L +M
Sbjct: 58 ----------AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 107
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
G AP+ +T+ ++ + E+ +A +L D+Q+
Sbjct: 108 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 13/148 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
TT T +I +Q +A M C PD+ ++TLI C+ +
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+M G + TYT LI +C+ G L A L M+ G PD
Sbjct: 69 CEMHRRGI--VANTVTYTTLIHGFCQVGDLDA-----------AQDLLNEMISCGVAPDY 115
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKK 307
+T++ ++ G C +++A + ED++K
Sbjct: 116 ITFHCMLAGLCSKKELRKAFAILEDLQK 143
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 18/253 (7%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCR---PDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T L+K + G ++ + M++ R PD Y T++ A G RA+ +L +
Sbjct: 418 TTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAE 477
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M G P + TY +L+ YC+ + R +AG PDVV+
Sbjct: 478 MARMG--VPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAG----------IEPDVVS 525
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YN +IDGC AL F +M+ +G AP +++Y +L++ ++ + + A V +M
Sbjct: 526 YNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA--- 398
++ ++ C G + +A + + + G P TY + + + A
Sbjct: 586 NDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKP 645
Query: 399 GEDGLLGDEVHER 411
G+ LL E+ ER
Sbjct: 646 GDALLLWKEIKER 658
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD+ YT L+ Y ++G R A R+ EA R + PD VTY ++
Sbjct: 412 PDSRIYTTLMKGYMKNG-----RVADTARMLEA---MRRQDDRNSHPDEVTYTTVVSAFV 463
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PS 349
+ RA ++ +M + G NR+TY+ L++ Y +IDRA ++LR+M + GI P
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE-DAGIEPD 522
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVH 409
SY II A A +F E+ G P + +Y + ++G+ L + V
Sbjct: 523 VVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPK-LANRVF 581
Query: 410 ERIKNGMR 417
+ + N R
Sbjct: 582 DEMMNDPR 589
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T ++ L E G EA + + H PD YN L+ LC+ + +++
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M F PD ++TILI + C + L EA L + GF PD
Sbjct: 220 MR-DDFDVKPDLVSFTILIDNVCNS-----------KNLREAMYLVSKLGNAGFKPDCFL 267
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YN ++ G C + A+ +++ MK++G P+++TY++LI S ++ A L+ M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 342 RLNHGIPSSSSYTPIIHALCEAG 364
+ P +++YT +++ +C G
Sbjct: 328 DAGYE-PDTATYTSLMNGMCRKG 349
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P T+ IL+S CR A + R+ LM+ G PD VT + + C
Sbjct: 120 PGRSTFLILLSHACR---------APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 170
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS 350
+T R+ A +L +++ +K P+ TY+ L+++ ++ E + +M+ P
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230
Query: 351 SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
S+T +I +C + + EA + +L + G P + Y + C
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 28/299 (9%)
Query: 95 RVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNH 154
RV + FF W G+ M +L + T W + E
Sbjct: 136 RVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM-----RKF 190
Query: 155 RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR 214
+ + + T+ +I+ +A TF+ K++ I + +L+ ALCR N +
Sbjct: 191 SPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSD 250
Query: 215 AKFLLEQMELPGFWC-----PPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRL 269
A L+ +C P DA ++ I+++ +C + G + R E G +
Sbjct: 251 AGHLI--------FCNKDKYPFDAKSFNIVLNGWCN---VIGSPREAERVWMEMGNV--- 296
Query: 270 MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNE 329
G DVV+Y+++I K + + L+LF+ MKK+ P+R Y++++ + +
Sbjct: 297 ----GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 330 IDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ A +++ M+ P+ +Y +I LC+A + EA E+++ G P TY
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARA-KFLLEQMELPGFWCPPDAFTYTILISS 242
F M PD+ +YNTL+ ++G A K L E + L G P TY IL+ +
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGL--VPGIDTYNILLDA 163
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
C+ G A LF+ L P+++TYN LI+G CK+ R+ +
Sbjct: 164 LCKSG-----------HTDNAIELFK-HLKSRVKPELMTYNILINGLCKSRRVGSVDWMM 211
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCE 362
++KK G PN VTY ++++ Y T I++ +++ M++ + ++ ++ AL +
Sbjct: 212 RELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN-CAVVSALIK 270
Query: 363 AGRVAEAWSFLVELVDGG 380
GR EA+ + ELV G
Sbjct: 271 TGRAEEAYECMHELVRSG 288
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 200 NTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR 259
N + +LC+ N RA+ LL G PD TY LI Y R I A RR
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVL--PDVITYNTLIKGYTRF-IGIDEAYAVTRR 73
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
+ EAG PDV TYN+LI G K + R L+LF++M G +P+ +Y++
Sbjct: 74 MREAG----------IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
L+ Y A ++L + L +P +Y ++ ALC++G A L
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 380 GNVPREYTYRLVCDKLC 396
P TY ++ + LC
Sbjct: 184 VK-PELMTYNILINGLC 199
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 16/238 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L+ L + G A F +K +P++ YN LI LC+ +++ ++
Sbjct: 156 TYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G+ P+A TYT ++ Y + +R+ + +LF M +G+ D
Sbjct: 215 KKSGY--TPNAVTYTTMLKMYFK-----------TKRIEKGLQLFLKMKKEGYTFDGFAN 261
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGC-APNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
A++ KT R + A E ++ + G + + V+Y++L+ Y +D ++L +++
Sbjct: 262 CAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIE 321
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ P ++T I++ L G A L + + G P T + D LC AG
Sbjct: 322 -MKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 104/240 (43%), Gaps = 26/240 (10%)
Query: 114 SGFTHDEVTCREMACVLVRAN-ATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLG 172
SG+T + VT M + + K L FLK + + N A ++ LIK
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN---CAVVSALIK--- 270
Query: 173 EQGLASEASLTFYRMKQYHCRP-DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPP 231
G A EA + + + R DI +YNTL+ + GN LLE++E+ G P
Sbjct: 271 -TGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGL--KP 327
Query: 232 DAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK 291
D +T+TI+++ G G K L G + G P VVT N LIDG CK
Sbjct: 328 DDYTHTIIVNGLLNIGNTGGAEK----HLACIGEM-------GMQPSVVTCNCLIDGLCK 376
Query: 292 TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
+ RA+ LF M+ + + TY S++ + A ++L IPSS+
Sbjct: 377 AGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSA 432
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 36/248 (14%)
Query: 170 LLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWC 229
L +QG A+ M+Q P++ YN ++ A CR+ N A+ + +M G
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL-- 515
Query: 230 PPDAFTYTILISSYCR--------------------------HGILTG-CRKATRRRLYE 262
P+ FTY+ILI + + + I+ G C+ + E
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
L L+ K + +YN++IDG K A+E + +M + G +PN VT+ SLI
Sbjct: 576 M--LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 323 YYSATNEIDRAVEVLRDMQ--RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ +N +D A+E+ +M+ L +P +Y +I C+ + A++ EL + G
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLP---AYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 381 NVPREYTY 388
+P Y
Sbjct: 691 LMPNVSVY 698
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 18/250 (7%)
Query: 152 NNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN 211
+N N + TI + +G+ A E + K+Y +YN++I +VG+
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS--CTSYNSIIDGFVKVGD 605
Query: 212 FARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLML 271
A +M G P+ T+T LI+ +C+ + + T +L
Sbjct: 606 TDSAVETYREMSENG--KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL----- 658
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
D+ Y ALIDG CK ++ A LF ++ + G PN Y+SLI + ++D
Sbjct: 659 ------DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 332 RAVEVLRDMQRLNHGIPSS-SSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRL 390
A+++ + M +N GI +YT +I L + G + A EL+D G VP E + +
Sbjct: 713 AAIDLYKKM--VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 391 VCDKLCLAGE 400
+ + L G+
Sbjct: 771 LVNGLSKKGQ 780
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 13/211 (6%)
Query: 200 NTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR 259
N + C+ G A L+ ME G P+ Y ++ ++CR +
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGI--EPNVVFYNNMMLAHCR-----------MKN 499
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
+ A +F ML KG P+ TY+ LIDG K Q A ++ M N V Y++
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
+I + +A E+L+++ + S +SY II + G A E+ +
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 380 GNVPREYTYRLVCDKLCLAGEDGLLGDEVHE 410
G P T+ + + C + L + HE
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
EA F R+ PD ++ + A C+ + A LL +M P TYT
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMR-GKLGVPASQETYTS 315
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
+I ++ + G + EA R+ M+ G V+ +L++G CK + +A
Sbjct: 316 VIVAFVKEG-----------NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
L+LF M+++G AP++V + ++ ++ E+++A+E M+ + PSS ++H
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIA-PSSV----LVH 419
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
+ + AE+ +E+ + + + +C+K+ L
Sbjct: 420 TMIQGCLKAESPEAALEIFN-DSFESWIAHGFMCNKIFL 457
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T LI + A + MK + D+ AY LI C+ + A L
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
ELP P+ Y LIS + G ++ A L++ M+ G D+
Sbjct: 684 S--ELPELGLMPNVSVYNSLISGFRNLG-----------KMDAAIDLYKKMVNDGISCDL 730
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
TY +IDG K I A +L+ ++ G P+ + + L+ S + +A ++L +
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVC 392
M++ P+ Y+ +I G + EA+ E+++ G V + + L+
Sbjct: 791 MKK-KDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 147/398 (36%), Gaps = 58/398 (14%)
Query: 64 TPLRQRNLNDEHRKLHDGLLLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTC 123
+ L + NL DE +++++ ++L+G A D L +R SL + EA F
Sbjct: 212 SSLVRSNLIDEAKEIYNKMVLIGVAG--DNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 124 RE---MACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEA 180
E + L A KT + + P + T T +I ++G EA
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 181 SLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILI 240
M + + A +L+ C+ +A L +ME G PD +++++
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL--APDKVMFSVMV 387
Query: 241 SSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALE 300
+C++ + +A + M P V + +I GC K + ALE
Sbjct: 388 EWFCKN-----------MEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 301 LFED----------------------------------MKKKGCAPNRVTYDSLIRYYSA 326
+F D M++KG PN V Y++++ +
Sbjct: 437 IFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 327 TNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
+D A + +M L G+ P++ +Y+ +I + AW + ++ E
Sbjct: 497 MKNMDLARSIFSEM--LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Query: 386 YTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQT 423
Y + + LC G+ + + IK KRY +
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIK---EKRYSMS 589
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M P + N ++ +L R AK + +M L G D T +L+ +
Sbjct: 192 FGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG--VAGDNVTTQLLMRAS 249
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
R R+ EA ++FR ++ +G PD + ++ + CKT + AL+L
Sbjct: 250 LRE-----------RKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLR 298
Query: 304 DMKKK-GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALC 361
+M+ K G ++ TY S+I + ++ AV V+ +M + GIP S + T +++ C
Sbjct: 299 EMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM--VGFGIPMSVIAATSLVNGYC 356
Query: 362 EAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ + +A + + G P + + ++ + C
Sbjct: 357 KGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFC 391
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 202 LIYALCRVGNFA-RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRL 260
++ LC N A A ++L + P F D Y ++I + G L
Sbjct: 135 IVLTLCNQANLADEALWVLRK--FPEFNVCADTVAYNLVIRLFADKGDLNI--------- 183
Query: 261 YEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
A L + M G PDV+TY ++I+G C +I A L ++M K C N VTY +
Sbjct: 184 --ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRI 241
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHG---IPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+ + +++RA+E+L +M++ + G P++ +YT +I A CE RV EA L +
Sbjct: 242 LEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMG 301
Query: 378 DGGNVPREYT 387
+ G +P T
Sbjct: 302 NRGCMPNRVT 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 137/345 (39%), Gaps = 62/345 (17%)
Query: 92 DPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHH 151
DP++ GLR FF W S H + AC +++ A L ++ E+ K
Sbjct: 71 DPNQFQSGLR----FFIWAGTLSSHRHSAYMYTK-ACDILKIRAKPDLIKYVIESYRKEE 125
Query: 152 NNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN 211
+ T+ ++ L + LA EA + +++ D AYN +I G+
Sbjct: 126 C-----FVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGD 180
Query: 212 FARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLML 271
A L+++M+ G + PD TYT +I+ YC G ++ +A RL + M
Sbjct: 181 LNIADMLIKEMDCVGLY--PDVITYTSMINGYCNAG-----------KIDDAWRLAKEMS 227
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK------------------------ 307
V + VTY+ +++G CK+ ++RALEL +M+K
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 308 ---------------KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
+GC PNRVT LI+ +E +A+ L D G+ S
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSEC 347
Query: 353 YTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCL 397
++ +L R EA ++ G P V +LCL
Sbjct: 348 FSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 153/380 (40%), Gaps = 45/380 (11%)
Query: 95 RVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNH 154
R+ L LE F F D +M +L RA + +L E +H+
Sbjct: 79 RLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGF 138
Query: 155 ----------RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIY 204
+ + ++K+ E+GL A F M Y P + + N+L+
Sbjct: 139 VVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLS 198
Query: 205 ALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAG 264
L R G A + +QM F PD FT +I++++YCR G + + G
Sbjct: 199 NLVRKGENFVALHVYDQM--ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG 256
Query: 265 -------------------------RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
R+ RLM +G +VVTY +LI G CK ++ A
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSY-TPIIH 358
+FE +K+K ++ Y L+ Y T +I AV V +M + G+ ++++ +I+
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI--GVRTNTTICNSLIN 374
Query: 359 ALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRK 418
C++G++ EA + D P +TY + D C AG DE + +K
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG----YVDEALKLCDQMCQK 430
Query: 419 RYKQTMMVKPVMTRKGYPEI 438
T+M ++ KGY I
Sbjct: 431 EVVPTVMTYNILL-KGYSRI 449
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 112/284 (39%), Gaps = 39/284 (13%)
Query: 147 ANKHHNNHRNNPITTATITC--LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIY 204
A + H+N + T T C LI + G EA F RM + +PD YNTL+
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 205 ALCRVGNFARAKFLLEQMELPGFWCP----PDAFTYTILISSYCR----HGILTGCRKAT 256
CR G A L +QM C P TY IL+ Y R H +L+ +
Sbjct: 410 GYCRAGYVDEALKLCDQM------CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 257 RR--------------------RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
+R EA +L+ +L +G + D +T N +I G CK ++
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTP 355
A E+ +++ C P TY +L Y + A V M+R GI P+ Y
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER--KGIFPTIEMYNT 581
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+I + + + ++EL G P TY + C G
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P+ YN I LC+ G A+ L + L PD +TYTILI GC
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDL-LSSDRFIPDEYTYTILIH---------GC- 765
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
A + +A L M KG +P++VTYNALI G CK + RA L + +KG PN
Sbjct: 766 -AIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDM 340
+TY++LI + + A+ + M
Sbjct: 825 AITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 33/297 (11%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LIK ++GL EA F +K+ D Y L+ CR G A + +
Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHD 355
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
M G + LI+ YC+ G +L EA ++F M PD
Sbjct: 356 NMIEIGV--RTNTTICNSLINGYCKSG-----------QLVEAEQIFSRMNDWSLKPDHH 402
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
TYN L+DG C+ + AL+L + M +K P +TY+ L++ YS + + + M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 341 QRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC--- 396
L G+ + S + ++ AL + G EA ++ G + T ++ LC
Sbjct: 463 --LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 397 LAGEDGLLGDEV-----------HERIKNGMRK--RYKQTMMVKPVMTRKG-YPEIE 439
E + D V ++ + +G K K+ VK M RKG +P IE
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 100/246 (40%), Gaps = 22/246 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T AT LI G+ +A T + M + ++ + + +L R+ A LL
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 220 EQ-----MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
++ + LPG+ + F + I +T ++L
Sbjct: 670 QKIVDFDLLLPGYQSLKE-FLEASATTCLKTQKIAESVENSTPKKL-------------- 714
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG-CAPNRVTYDSLIRYYSATNEIDRA 333
VP+ + YN I G CK +++ A +LF D+ P+ TY LI + +I++A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCD 393
LRD L IP+ +Y +I LC+ G V A L +L G P TY + D
Sbjct: 775 F-TLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID 833
Query: 394 KLCLAG 399
L +G
Sbjct: 834 GLVKSG 839
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 124/351 (35%), Gaps = 78/351 (22%)
Query: 115 GFTHDEVTCREMACVLVRA---NATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLL 171
G DE++C + L + N LW + R T T+ +I L
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLW---------ENVLARGLLTDTITLNVMISGL 516
Query: 172 GEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFW--- 228
+ +EA + + C+P ++ Y L + +VGN A + E ME G +
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI 576
Query: 229 ------------------------------CPPDAFTYTILISSYCRHGILTGCRKATRR 258
P TY LI+ +C G++ AT
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY-ATCF 635
Query: 259 RLYEAG-------------RLFRLMLFKG---FVPDVVTYNALIDG-------------- 288
+ E G LFRL + +V ++ L+ G
Sbjct: 636 EMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATT 695
Query: 289 CCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIP 348
C KT +I ++E KK PN + Y+ I +++ A ++ D+ + IP
Sbjct: 696 CLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 349 SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+YT +IH AG + +A++ E+ G +P TY + LC G
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 25/165 (15%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD Y LI+ G+ +A L ++M L G P+ TY LI C+ G
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII--PNIVTYNALIKGLCKLG------ 804
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA-- 311
+ A RL + KG P+ +TYN LIDG K+ + A+ L E M +KG
Sbjct: 805 -----NVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
Query: 312 ---------PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI 347
P V D ++ +T I+ L D++R++ +
Sbjct: 860 SDKQGDVDIPKEVVLDPEVK-LGSTGVIEMNSNELYDVRRVSEAV 903
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 26/246 (10%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
AT T +I + G+ A F +M + C PD +I A R GN A L ++
Sbjct: 211 ATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDR 270
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGC------------------------RKATR 257
+ DA T++ LI Y G GC
Sbjct: 271 ARTEKWRI--DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA 328
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
+R ++A +++ ++ GF P+ TY AL+ + AL ++ +MK+KG + + Y
Sbjct: 329 KRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILY 388
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
++L+ + +D A E+ +DM+ P S +++ +I +GRV+EA + L+++
Sbjct: 389 NTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMR 448
Query: 378 DGGNVP 383
+ G P
Sbjct: 449 EAGFEP 454
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 195 DIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK 254
++ YN + + + +++ L ++M G PD T+T +IS ++G+
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGI--KPDNATFTTIISCARQNGV------ 225
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
+R E F M G PD VT A+ID + + AL L++ + + +
Sbjct: 226 --PKRAVE---WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFL 373
VT+ +LIR Y + D + + +M+ L G+ P+ Y +I ++ A R +A
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKAL--GVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 374 VELVDGGNVPREYTY 388
+L+ G P TY
Sbjct: 339 KDLITNGFTPNWSTY 353
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 28/266 (10%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHC-RPDIRAYNTLIYALCRVGNFARAKF 217
+++ T+ +I + E+GL EA FY + R D+ YN +I A + +A
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALS 536
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
L + M+ G W PD TY L +L G EA R+ ML G P
Sbjct: 537 LFKGMKNQGTW--PDECTYNSLFQ------MLAGVDLVD-----EAQRILAEMLDSGCKP 583
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
TY A+I + + A++L+E M+K G PN V Y SLI ++ + ++ A++
Sbjct: 584 GCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643
Query: 338 RDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVD---GGNVPREYTYRLVCD 393
R M+ HG+ S+ T +I A + G + EA ++ D G +V + +C
Sbjct: 644 RMMEE--HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCA 701
Query: 394 KLCLAGEDGLLGDEVHERIKNGMRKR 419
L + E E I N +R++
Sbjct: 702 DLGIVSE--------AESIFNALREK 719
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
T+ LI Y + G RL +A LF ML G D VT+N +I C
Sbjct: 307 TFNTLIDLYGKAG-----------RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGH 355
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 354
+ A L + M++KG +P+ TY+ L+ ++ +I+ A+E R ++++ P + ++
Sbjct: 356 LSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGL-FPDTVTHR 414
Query: 355 PIIHALCEAGRVAEAWSFLVEL------VDGGNVP 383
++H LC+ VAE + + E+ +D +VP
Sbjct: 415 AVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVP 449
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 28/239 (11%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T L ++L L EA M C+P + Y +I + R+G + A L E M
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 223 ELPGFWCPPDAFTYTILISSYCRHG----------------------ILTGCRKATRRR- 259
E G P+ Y LI+ + G +LT KA +
Sbjct: 612 EKTG--VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
Query: 260 -LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
L EA R++ M PDV N+++ C + A +F +++KG + +++
Sbjct: 670 CLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFA 728
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+++ Y +D A+EV +M R + + +S+ ++ G+++E E++
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEM-RESGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 21/275 (7%)
Query: 95 RVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNH 154
+VDL L +F + A S + E+ V R K+L A+ ++
Sbjct: 245 KVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSL-----HFASGSDSSP 299
Query: 155 RNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR 214
R P T+T LI L G+ G ++A+ F M + D +NT+I+ G+ +
Sbjct: 300 RK-PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 358
Query: 215 AKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG 274
A+ LL++ME G PD TY IL+S + G + A +R + G
Sbjct: 359 AESLLKKMEEKGI--SPDTKTYNILLSLHADAGDIEA-----------ALEYYRKIRKVG 405
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
PD VT+ A++ C+ + + +M + + + +++ Y + +A
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK 465
Query: 335 EVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
+ Q + SS++ +I E G EA
Sbjct: 466 ALFERFQL--DCVLSSTTLAAVIDVYAEKGLWVEA 498
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 149/396 (37%), Gaps = 68/396 (17%)
Query: 107 FRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITC 166
F+W E GFT + L +A + W + ++ ++ +N ++ T
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLV---FDRVRSDEGSNLVSADTFIV 178
Query: 167 LIKLLGEQGLASEASLTFYRMKQYH--CRP--DIRAYNTLIYALCRVGNFARAKFLLEQM 222
LI+ G+ +A F + Y C+ ++R L+ ALC+ G+ A LE++
Sbjct: 179 LIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERI 238
Query: 223 --ELPGFWCP----------------------------------PDAFTYTILISSYCRH 246
+ W P P TY LI YCR
Sbjct: 239 GGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM 298
Query: 247 -------GILTGCRKATRR-----------RLYEAGRLFRL--MLFKGFV----PDVVTY 282
+L + A L EAGRL M+ + FV P +VTY
Sbjct: 299 RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTY 358
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N+L+ CK + A ++ + M +G P TY+ +Y+S N+ + + + +
Sbjct: 359 NSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
H P +Y I+ LCE G+++ A E+ + G P T ++ LC
Sbjct: 419 AGHS-PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 403 LLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPEI 438
+E ++ G+ +Y M+ + KG ++
Sbjct: 478 EAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDM 513
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PDI YN+LI+ LC G A + +++++ G PD TY ILI C+
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH--EPDNSTYRILIQGCCKS------- 337
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
R+ +A R++ M + GFVPD + YN L+DG K ++ A +LFE M ++G +
Sbjct: 338 ----YRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRAS 393
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
TY+ LI + + D+++ + + +++ + LC G++ A +
Sbjct: 394 CWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFV-DAITFSIVGLQLCREGKLEGAVKLV 452
Query: 374 VEL 376
E+
Sbjct: 453 EEM 455
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 143 LKETANKHHNNHRNNPIT------TATITCLIKLLGEQGLASEASLTFYRMKQYH-CRPD 195
L E ++ H ++ I T + L+ L + SE F ++K + D
Sbjct: 188 LLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFD 247
Query: 196 IRAYNTLIYALCRVGNFARAKFLLEQME----LPGFWCPPDAFTYTILISSYCRHGILTG 251
+YN I+ G+ A L ++M+ + G PD TY LI C G
Sbjct: 248 TWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFG---- 303
Query: 252 CRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
+ +A ++ + G PD TY LI GCCK+YR+ A+ ++ +M+ G
Sbjct: 304 -------KAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV 356
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAW 370
P+ + Y+ L+ ++ A ++ M + G+ +S +Y +I L GR +
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKM--VQEGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 371 SFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
+ +L G T+ +V +LC G+
Sbjct: 415 TLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+T+ T ++ ++G A +M + C DI YN +I L ++G A +
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
L+++ G + D Y LI++ KATR L EA +LF M G PD
Sbjct: 688 LDRLTKQGGYL--DIVMYNTLINA---------LGKATR--LDEATQLFDHMKSNGINPD 734
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDR 332
VV+YN +I+ K +++ A + + M GC PN VT D+++ Y E R
Sbjct: 735 VVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGKEMEKAR 787
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 186 RMKQYHCRPD---IRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISS 242
R ++ +PD + NT + G+ + A L E G ++TY ++SS
Sbjct: 581 RGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGV-TDLTSYTYNSMMSS 639
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF-VPDVVTYNALIDGCCKTYRIQRALEL 301
+ + G R + +F+ F D+ TYN +I G K R A +
Sbjct: 640 FVKKGYFQTARGVLDQ------------MFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 302 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHAL 360
+ + K+G + V Y++LI +D A ++ M+ ++GI P SY +I
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMK--SNGINPDVVSYNTMIEVN 745
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYT 387
+AG++ EA+ +L ++D G +P T
Sbjct: 746 SKAGKLKEAYKYLKAMLDAGCLPNHVT 772
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELP-GFWCPPDAFTYTILI--------SSYCRHGIL 249
YN++I+ + G RA + M C P TY IL +SY H +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 250 TGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK-K 308
R LFR M+ G PDV N L+ G + + AL +F M
Sbjct: 270 ETVRS-----------LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVY 318
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAE 368
C PN TYD LI A A E+L +M+ +P+ SY +++A +G + +
Sbjct: 319 DCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGF-VPNGKSYNSLVNAFALSGEIDD 377
Query: 369 AWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
A L E+++ G V +YR + D+ C G+
Sbjct: 378 AVKCLWEMIENGRVVDFISYRTLVDESCRKGK 409
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 114/300 (38%), Gaps = 32/300 (10%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTAT 163
F W FTH+ + L A + + + + + H + N
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNEN------L 209
Query: 164 ITCLIKLLGEQGLASEASLTFYRM---KQYHCRPDIRAYNTLIYALCRVGN--------F 212
+I + G A F M K CRP IR Y+ L AL GN
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM-L 271
+ L QM G PD F L+ Y + +A R+F M +
Sbjct: 270 ETVRSLFRQMVDSGI--EPDVFALNCLVKGY-----------VLSLHVNDALRIFHQMSV 316
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
P+ TY+ LI G C R A EL +MK KG PN +Y+SL+ ++ + EID
Sbjct: 317 VYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEID 376
Query: 332 RAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
AV+ L +M N + SY ++ C G+ EA L L + V R+ +LV
Sbjct: 377 DAVKCLWEMIE-NGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLV 435
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 21/299 (7%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANATK-TLWGFLKETANKHHNNHRNNPITTA 162
LE FRW++ + D ++ V+ + T+ +W F + K+ + + A
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLF---SEMKNSGCRPDASVYNA 173
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYH-CRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
IT + + + +MK C+P++ YN L+ A + G + L +
Sbjct: 174 LITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD 233
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKA-TRRRLYEAGRLFRLMLFKGFVPDVV 280
+++ PD +T+ ++ +Y ++G++ TR R E PD++
Sbjct: 234 LDMSP--VSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECK------------PDII 279
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
T+N LID K ++ + F+ + + P T++S+I Y ID+A V + M
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+N+ IPS +Y +I G V+ A E+ + V + T + + C G
Sbjct: 340 NDMNY-IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
+T +I L + G A F +MK+ RP +++L+ ++ + G + +
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS--MKVY 371
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
ME+ GF P A + LI SY + G +L A RL+ M GF P+
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAG-----------KLDTALRLWDEMKKSGFRPNFGL 420
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y +I+ K+ +++ A+ +F+DM+K G P TY L+ ++ + ++D A+++ M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 342 RLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
N G+ P SSY ++ L V A L+E+
Sbjct: 481 --NAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
+ + L+ +G+ G + + M+ + RP + +LI + + G A L ++
Sbjct: 349 SVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE 408
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M+ GF P+ YT++I S+ + G +L A +F+ M GF+P T
Sbjct: 409 MKKSGF--RPNFGLYTMIIESHAKSG-----------KLEVAMTVFKDMEKAGFLPTPST 455
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y+ L++ + ++ A++++ M G P +Y SL+ + +D A ++L +M+
Sbjct: 456 YSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMK 515
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
+ + + +S +I+ + +A W
Sbjct: 516 AMGYSVDVCASDVLMIYIKDASVDLALKW 544
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 14/210 (6%)
Query: 191 HCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILT 250
H AYN +I L + A ++ + G C D TY L+ + G+
Sbjct: 238 HGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESG--CKIDTQTYNNLMMLFLNKGLP- 294
Query: 251 GCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGC 310
Y+A ++ M + D TY +I K+ R+ A +LF+ MK++
Sbjct: 295 ----------YKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKL 344
Query: 311 APNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAW 370
P+ + SL+ +D +++V +MQ H PS++ + +I + +AG++ A
Sbjct: 345 RPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHR-PSATMFVSLIDSYAKAGKLDTAL 403
Query: 371 SFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
E+ G P Y ++ + +G+
Sbjct: 404 RLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 48/353 (13%)
Query: 60 FRHRTPLRQRNLNDEHRKLHDGL----LLLGPAAYRDPHRVDLGLRKSLEFFRWVEAHSG 115
R RTPL + + L G +++ A DP DL +L+ FRW G
Sbjct: 52 IRTRTPL-ETQFETWIQNLKPGFTNSDVVIALRAQSDP---DL----ALDIFRWTAQQRG 103
Query: 116 FTHDEVTCREM---ACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLL- 171
+ H+ M A R N +TL + A + ++ C+I+
Sbjct: 104 YKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE---------MSVPLYNCIIRFCC 154
Query: 172 GEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGN--------FARAKFLLEQM 222
G + L + A + +M + +PD+ Y L+ +L + N + L +QM
Sbjct: 155 GRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQM 214
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ G PD F ++I +Y + C + EA R+F+ M G P+ TY
Sbjct: 215 KSNGVI--PDTFVLNMIIKAYAK------CLEVD-----EAIRVFKEMALYGSEPNAYTY 261
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ L+ G C+ R+ + L +++M+ KG PN Y LI S +D AVEV+ DM
Sbjct: 262 SYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDML- 320
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
N P +Y ++ LC GR +EA + E V E YR + D++
Sbjct: 321 ANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 10/247 (4%)
Query: 192 CRPDIRAYNTLIYALC-RVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYC-RHGIL 249
C + YN +I C R F RA + +M L PD TYT+L+SS R L
Sbjct: 139 CEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKM-LRSDDSKPDLETYTLLLSSLLKRFNKL 197
Query: 250 TGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG 309
C L+ L + M G +PD N +I K + A+ +F++M G
Sbjct: 198 NVCYVY----LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYG 253
Query: 310 CAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
PN TY L++ + + + ++MQ + +P+ S Y +I +L R+ EA
Sbjct: 254 SEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQ-VKGMVPNGSCYMVLICSLSMERRLDEA 312
Query: 370 WSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNG--MRKRYKQTMMVK 427
+ +++ P TY V +LC G + V E K M +R +T+M +
Sbjct: 313 VEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDE 372
Query: 428 PVMTRKG 434
KG
Sbjct: 373 VYFLNKG 379
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 99/240 (41%), Gaps = 14/240 (5%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T+ C+ L E+ A +M+ Y P I+ L+ LC G A L+ +
Sbjct: 511 TLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDV 570
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
GF A T I G++ + R L LFR + G PDV+ Y
Sbjct: 571 AGEGFLGHMVASTAAI-------DGLIK--NEGVDRGL----ELFRDICANGHCPDVIAY 617
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ LI CK R A LF +M KG P TY+S+I + EIDR + + M
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
+ P +YT +IH LC +GR +EA E+ P T+ + LC G G
Sbjct: 678 -DEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 27/292 (9%)
Query: 106 FFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATIT 165
FF W G+ +D MA +L RA +L + + N ++
Sbjct: 92 FFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRC------FMSPGAFG 145
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYH-CRPDIRAYNTLIYALCRVGNFARAKFL---LEQ 221
I+ LG GL EAS F R+++ C P+ YN L+ A+ + N + + + L++
Sbjct: 146 FFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISK-SNSSSVELVEARLKE 204
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M GF D FT T ++ YC G K+ R A +F +L +G++ + ++
Sbjct: 205 MRDCGF--HFDKFTLTPVLQVYCNTG------KSER-----ALSVFNEILSRGWLDEHIS 251
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
L+ CK ++ +A EL E ++++ N TY LI + + ID+A ++ M+
Sbjct: 252 -TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMR 310
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP-REYTYRLVC 392
R+ + Y +I LC+ + A S +E+ G P R +L+C
Sbjct: 311 RMGMN-ADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLC 361
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
+TA I LIK +G+ L HC PD+ AY+ LI ALC+ A L
Sbjct: 582 STAAIDGLIK---NEGVDRGLELFRDICANGHC-PDVIAYHVLIKALCKACRTMEADILF 637
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+M G P TY +I +C+ G + R +YE + PDV
Sbjct: 638 NEMVSKGL--KPTVATYNSMIDGWCKEGEIDRGLSCIVR-MYEDEK----------NPDV 684
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
+TY +LI G C + R A+ + +MK K C PNR+T+ +LI+ A+ R+
Sbjct: 685 ITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFRE 744
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
M+ P S+ Y ++ + + + + E+V G P
Sbjct: 745 MEE-KEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 24/257 (9%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
R+ + T LI ++ +A F +M++ DI Y+ LI LC+ +
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLE 335
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG--------ILTGCRKATRRRLYEAGR 265
A L +++ G PPD L+ S+ I+ K + LY++
Sbjct: 336 MALSLYLEIKRSGI--PPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKS-- 391
Query: 266 LFRLMLFKGFVPDVVTYNA--LIDGCCKTYRIQRALELFEDMK--KKGCAPNRVTYDSLI 321
LF+GF+ + + + A I Y E+ + +K K P+ + +I
Sbjct: 392 -----LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVI 446
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
N++D AV +L D+ + N IP Y II +C+ GR E+ L E+ D G
Sbjct: 447 NCLVKANKVDMAVTLLHDIVQ-NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGV 505
Query: 382 VPREYTYRLVCDKLCLA 398
P ++T L C CLA
Sbjct: 506 EPSQFT--LNCIYGCLA 520
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G +P + YN +I+G CK R + +L+L +MK G P++ T + + + + A
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+++L+ M R P T ++ LCE GR +A +L ++ G
Sbjct: 529 LDLLKKM-RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEG 574
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 93/240 (38%), Gaps = 24/240 (10%)
Query: 99 GLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNP 158
G+ + LE FR + A+ G D + + L +A T E +K
Sbjct: 594 GVDRGLELFRDICAN-GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP----- 647
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
T AT +I ++G RM + PD+ Y +LI+ LC G + A F
Sbjct: 648 -TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFR 706
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
+M+ G C P+ T+ LI C+ G +G EA FR M K PD
Sbjct: 707 WNEMK--GKDCYPNRITFMALIQGLCKCG-WSG----------EALVYFREMEEKEMEPD 753
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
Y +L+ + I +F +M KG P V + Y A N + VE LR
Sbjct: 754 SAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRN----YMLAVNVTSKFVEDLR 809
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 21/299 (7%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANATK-TLWGFLKETANKHHNNHRNNPITTA 162
LE FRW++ + D ++ V+ + T+ +W F + K+ + + A
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLF---SEMKNSGCRPDASVYNA 173
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYH-CRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
IT + + + +MK C+P++ YN L+ A + G + L +
Sbjct: 174 LITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD 233
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKA-TRRRLYEAGRLFRLMLFKGFVPDVV 280
+++ PD +T+ ++ +Y ++G++ TR R E PD++
Sbjct: 234 LDMSP--VSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECK------------PDII 279
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
T+N LID K ++ + F+ + + P T++S+I Y ID+A V + M
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+N+ IPS +Y +I G V+ A E+ + V + T + + C G
Sbjct: 340 NDMNY-IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 46/223 (20%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG------NFA 213
+ T +++L G+ G A TF M + C PD A T++ R G F
Sbjct: 187 SVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFY 246
Query: 214 RA-------------KFLLEQMELPGF-------W-------CPPDAFTYTILISSYCRH 246
+A F+L ++ F W PP+ FTYT+++SSY +
Sbjct: 247 KAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQ 306
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
G EA + F M GFVP+ VTY+++I K ++A+ L+EDM+
Sbjct: 307 GFKE-----------EALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMR 355
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
+G P+ T +++ Y T +A+ + DM+R + IP+
Sbjct: 356 SQGIVPSNYTCATMLSLYYKTENYPKALSLFADMER--NKIPA 396
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 24/238 (10%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
TI LI + G Q EA + + P ++I A R G A L M
Sbjct: 672 TIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVRCGWLEDAYGLF--M 728
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
E C P A T +IL+++ G + EA + R L K D V Y
Sbjct: 729 ESAEKGCDPGAVTISILVNALTNRG-----------KHREAEHISRTCLEKNIELDTVGY 777
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
N LI + ++Q A E++E M G + TY+++I Y ++D+A+E+ + +R
Sbjct: 778 NTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARR 837
Query: 343 ----LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
L+ I YT +I + G+++EA S E+ G P +Y ++ K+C
Sbjct: 838 SGLYLDEKI-----YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV-KIC 889
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 127/323 (39%), Gaps = 37/323 (11%)
Query: 109 WVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLI 168
++ A T + R M VR + +G E+A K + TI+ L+
Sbjct: 693 YLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPG------AVTISILV 746
Query: 169 KLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFW 228
L +G EA + + D YNTLI A+ G A + E+M G
Sbjct: 747 NALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVP 806
Query: 229 CPPDAFTYTILISSYCRH-------GILTGCRKA-----------------TRRRLYEAG 264
C TY +IS Y R I + R++ ++ EA
Sbjct: 807 CSIQ--TYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEAL 864
Query: 265 RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYY 324
LF M KG P +YN ++ C + EL + M++ G + TY +LI+ Y
Sbjct: 865 SLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Query: 325 SATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
+ +++ A + + ++ GIP S S ++ ++ AL +AG + EA ++ + G P
Sbjct: 925 AESSQFAEAEKTITLVK--EKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISP 982
Query: 384 REYTYRLVCD--KLCLAGEDGLL 404
R + C E G+L
Sbjct: 983 DSACKRTILKGYMTCGDAEKGIL 1005
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 184 FYRMK-QYHCRPDIRAYNTLIYALCRVGNFARAK-FLLEQMELPGFWCPPDAFTYTILIS 241
F MK Q RP + Y ++ +VG A+ LE +E+ C PDA ++
Sbjct: 175 FSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVG---CEPDAVACGTMLC 231
Query: 242 SYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALEL 301
+Y R G R + Y+A + R++L YN ++ K + ++L
Sbjct: 232 TYARWG-----RHSAMLTFYKAVQERRILL------STSVYNFMLSSLQKKSFHGKVIDL 280
Query: 302 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALC 361
+ +M ++G PN TY ++ Y+ + A++ +M+ L +P +Y+ +I
Sbjct: 281 WLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGF-VPEEVTYSSVISLSV 339
Query: 362 EAGRVAEAWSFLVELVDGGNVPREYT 387
+AG +A ++ G VP YT
Sbjct: 340 KAGDWEKAIGLYEDMRSQGIVPSNYT 365
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILI--S 241
F M++ + D YN +I+ LC+ G F A + + + G PD TY ++I S
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGL--QPDVQTYNMMIRFS 59
Query: 242 SYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALEL 301
S R A +L+ M+ +G VPD +TYN++I G CK ++ +A ++
Sbjct: 60 SLGR-----------------AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV 102
Query: 302 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHAL 360
K C+ T+++LI Y + + + +M R GI ++ +YT +IH
Sbjct: 103 -----SKSCS----TFNTLINGYCKATRVKDGMNLFCEMYR--RGIVANVITYTTLIHGF 151
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ G A E+V G T+R + +LC
Sbjct: 152 RQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 29/221 (13%)
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
N + TA +I L + G EA F + +PD++ YN +I R + RA
Sbjct: 9 NMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRA 64
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
+ L +M G PD TY +I C+ L RK ++
Sbjct: 65 EKLYAEMIRRGLV--PDTITYNSMIHGLCKQNKLAQARKVSK------------------ 104
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVE 335
T+N LI+G CK R++ + LF +M ++G N +TY +LI + + + A++
Sbjct: 105 --SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 336 VLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVE 375
+ ++M +++G+ SSS ++ I+ LC + +A + L++
Sbjct: 163 IFQEM--VSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 232 DAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK 291
D Y I+I C+ G + EAG +F +L G PDV TYN +I +
Sbjct: 13 DTAGYNIIIHGLCKAG-----------KFDEAGNIFTNLLISGLQPDVQTYNMMI----R 57
Query: 292 TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
+ RA +L+ +M ++G P+ +TY+S+I N++ +A +V + S S
Sbjct: 58 FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK----------SCS 107
Query: 352 SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHER 411
++ +I+ C+A RV + + E+ G V TY + G+ D E
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 412 IKNGM 416
+ NG+
Sbjct: 168 VSNGV 172
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 266 LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
+F++M D YN +I G CK + A +F ++ G P+ TY+ +IR+ S
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 326 ATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
+ RA ++ +M R +P + +Y +IH LC+ ++A+A
Sbjct: 61 ----LGRAEKLYAEMIRRGL-VPDTITYNSMIHGLCKQNKLAQA 99
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 23/242 (9%)
Query: 152 NNHRNNPITTATITC---LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCR 208
NH +P T + L+ +G EA F RMK+ C+P YN +I +
Sbjct: 217 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 276
Query: 209 VGNFARAKFLLEQM--ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRL 266
A ++ ++ E+ C P+ TYT L++++ R G+ C KA +
Sbjct: 277 ----ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL---CEKAEE--------I 321
Query: 267 FRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSA 326
F + G PDV YNAL++ + A E+F M+ GC P+R +Y+ ++ Y
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 327 TNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
A V +M+RL GI P+ S+ ++ A +A V + + + E+ + G P
Sbjct: 382 AGLHSDAEAVFEEMKRL--GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 386 YT 387
+
Sbjct: 440 FV 441
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
M + PD N+++ R+G F + + +L +ME C D TY ILI+ Y +
Sbjct: 429 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME--NGPCTADISTYNILINIYGK 486
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G L R+ E LF + K F PDVVT+ + I + + LE+FE+M
Sbjct: 487 AGFL--------ERIEE---LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
GCAP+ T L+ S+ ++++ VLR M + G+ SS
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK---GVTVSS 578
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
+++ +PD+ +N LI A + + A+ L Q+ L + P + TY +LI +YC
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTED-TYALLIKAYCMA 203
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVP----DVVTYNALIDGCCK-TYRIQRALEL 301
G++ E + + + V V YNA I+G K + A+++
Sbjct: 204 GLI------------ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 302 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALC 361
F+ MK+ C P TY+ +I Y ++ + ++ +M R + P+ +YT +++A
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFA 310
Query: 362 EAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
G +A +L + G P Y Y + + AG
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 23/242 (9%)
Query: 152 NNHRNNPITTATITC---LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCR 208
NH +P T + L+ +G EA F RMK+ C+P YN +I +
Sbjct: 239 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 298
Query: 209 VGNFARAKFLLEQM--ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRL 266
A ++ ++ E+ C P+ TYT L++++ R G+ C KA +
Sbjct: 299 ----ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL---CEKAEE--------I 343
Query: 267 FRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSA 326
F + G PDV YNAL++ + A E+F M+ GC P+R +Y+ ++ Y
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 327 TNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
A V +M+RL GI P+ S+ ++ A +A V + + + E+ + G P
Sbjct: 404 AGLHSDAEAVFEEMKRL--GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 386 YT 387
+
Sbjct: 462 FV 463
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
M + PD N+++ R+G F + + +L +ME C D TY ILI+ Y +
Sbjct: 451 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME--NGPCTADISTYNILINIYGK 508
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G L R+ E LF + K F PDVVT+ + I + + LE+FE+M
Sbjct: 509 AGFL--------ERIEE---LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
GCAP+ T L+ S+ ++++ VLR M + G+ SS
Sbjct: 558 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK---GVTVSS 600
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+PD+ +N LI A + + A+ L Q+ L + P + TY +LI +YC G++
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTED-TYALLIKAYCMAGLI--- 228
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVP----DVVTYNALIDGCCK-TYRIQRALELFEDMKK 307
E + + + V V YNA I+G K + A+++F+ MK+
Sbjct: 229 ---------ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR 279
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
C P TY+ +I Y ++ + ++ +M R + P+ +YT +++A G
Sbjct: 280 DRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCE 338
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+A +L + G P Y Y + + AG
Sbjct: 339 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F M Q + Y TLI L + G+ A+ + ++M G PPD TY IL+
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG--VPPDIMTYNILLDGL 61
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C++G L + ++ + LF + KG P+VVTY +I G CK + A LF
Sbjct: 62 CKNGKLE--KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
MK+ G P+ TY++LIR + + + E++++M+
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 157
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T T LI+ L + G A F M PDI YN L+ LC+ G +A +
Sbjct: 16 TVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGK 75
Query: 221 QMELPGFWCP-------PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
+ +C P+ TYT +IS +C+ G EA LFR M
Sbjct: 76 VEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKE-----------EAYTLFRKMKED 124
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
G +PD TYN LI + + EL ++M+ A + TY
Sbjct: 125 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 265 RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYY 324
LFR M +G V + VTY LI G + A E+F++M G P+ +TY+ L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 325 SATNEIDRA-----VEVLRDM---QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
++++A VE D+ L P+ +YT +I C+ G EA++ ++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 377 VDGGNVPREYTY 388
+ G +P TY
Sbjct: 122 KEDGPLPDSGTY 133
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSS-SSYTPII 357
+ELF +M ++G N VTY +LI+ + D A E+ ++M ++ G+P +Y ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM--VSDGVPPDIMTYNILL 58
Query: 358 HALCE---------AGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
LC+ AG+V + W L G P TY + C G
Sbjct: 59 DGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKG 109
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 19/250 (7%)
Query: 153 NHRNNPITTAT--ITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
+H+N+P + LI+ G+ + + A TF +M QY ++N L+ A
Sbjct: 92 SHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSK 151
Query: 211 NFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM 270
NF + L +++ PD +Y ILI SYC G +A + R M
Sbjct: 152 NFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE-----------KAIEIMRQM 200
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
KG + + ++ K ++ A L+ +M KKGC + Y+ +R SA E
Sbjct: 201 QGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN--VRIMSAQKES 258
Query: 331 -DRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN-VPREYTY 388
+R E++ +M + P + SY ++ A CE G + EA + E ++G N P T+
Sbjct: 259 PERVKELIEEMSSMGLK-PDTISYNYLMTAYCERGMLDEAKK-VYEGLEGNNCAPNAATF 316
Query: 389 RLVCDKLCLA 398
R + LC +
Sbjct: 317 RTLIFHLCYS 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR-------- 245
PD +Y LI + C G +A ++ QM+ G AFT TIL S Y +
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFT-TILSSLYKKGELEVADN 230
Query: 246 ---HGILTGCR---KATRRRLYEAGR--------LFRLMLFKGFVPDVVTYNALIDGCCK 291
+ GC A R+ A + L M G PD ++YN L+ C+
Sbjct: 231 LWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 292 TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
+ A +++E ++ CAPN T+ +LI + + ++ + + + H IP +
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYM-HKIPDFN 349
Query: 352 SYTPIIHALCEAGRVAEAWSFL 373
+ ++ L E + +A +
Sbjct: 350 TLKHLVVGLVENKKRDDAKGLI 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 27/174 (15%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+TT T ++ L ++G A + M + C D AYN I + + + R K L
Sbjct: 207 VTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKEL 265
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRK--------------ATRR------ 258
+E+M G PD +Y L+++YC G+L +K AT R
Sbjct: 266 IEEMSSMGL--KPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHL 323
Query: 259 ---RLYEAG-RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
RLYE G +F+ ++ +PD T L+ G + + A L +KKK
Sbjct: 324 CYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 29/228 (12%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
S+A F R+K+ PD+ AYN++I + F A+ L+++M G P+ +Y+
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG--VLPNTVSYS 299
Query: 238 ILISSYCR-HGILTGCRKATRRR-----------------------LYEAGRLFRLMLFK 273
L+S Y H L + + EA RLF +
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
P+VV+YN ++ + A+ LF M++K N VTY+++I+ Y T E ++A
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 334 VEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
++++MQ + GI P++ +Y+ II +AG++ A + +L G
Sbjct: 420 TNLVQEMQ--SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 30/240 (12%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGI----L 249
P + AYN ++ + R F A L ++M PD +TY+ LI+S+ + G+ L
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRAL--APDRYTYSTLITSFGKEGMFDSAL 210
Query: 250 TGCRKATRRR----------LYEAGR----------LFRLMLFKGFVPDVVTYNALIDGC 289
+ +K + R L E R +F + G PD+V YN++I+
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 290 CKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPS 349
K + A L ++M + G PN V+Y +L+ Y ++ A+ V +M+ +N +
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 350 SSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVH 409
++ +I + V EA L P +Y + L + GE L G+ +H
Sbjct: 331 TTC-NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTI---LRVYGEAELFGEAIH 386
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 20/185 (10%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
N IT +TI I + G+ G A+ F +++ D Y T+I A RVG AK
Sbjct: 434 NAITYSTI---ISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
LL +++LP + R +T KA R EA +FR G V
Sbjct: 491 RLLHELKLP---------------DNIPRETAITILAKAGRTE--EATWVFRQAFESGEV 533
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
D+ + +I+ + R +E+FE M+ G P+ ++ Y E ++A V
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 337 LRDMQ 341
R+MQ
Sbjct: 594 YREMQ 598
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+EA R + PD Y+ + A C+ + A A LL +M+ C P TYT
Sbjct: 250 AEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKL-CVPSQETYT 308
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
+I + + G + +A RL ML G +VV +LI G CK +
Sbjct: 309 SVILASVKQG-----------NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS 357
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
AL LF+ M+K+G +PN VT+ LI ++ E+++A+E + M+ L PS II
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL-TPSVFHVHTII 416
Query: 358 HALCEAGRVAEAWSFLVELVDGG 380
+ + EA E + G
Sbjct: 417 QGWLKGQKHEEALKLFDESFETG 439
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 200 NTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR 259
NT++ LC+ G A LL +ME G P+ +Y ++ +CR ++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIG--PNVVSYNNVMLGHCR-----------QKN 493
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
+ A +F +L KG P+ TY+ LIDGC + + Q ALE+ M N V Y +
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG 379
+I + +A E+L +M S SY II + G + A + E+
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 380 GNVPREYTYRLVCDKLC 396
G P TY + + LC
Sbjct: 614 GISPNVITYTSLMNGLC 630
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 29/245 (11%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
Y T+I LC+VG ++A+ LL M C +Y +I + + G + A
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCV-SCMSYNSIIDGFFKEGEMDSAVAA-- 606
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
YE M G P+V+TY +L++G CK R+ +ALE+ ++MK KG + Y
Sbjct: 607 ---YEE------MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+LI + + ++ A + ++ L G+ PS Y +I G + A ++
Sbjct: 658 GALIDGFCKRSNMESASALFSEL--LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 377 VDGGNVPREYTYRLVCD------KLCLAGE-------DGLLGDE-VHERIKNGMRKRYKQ 422
+ G TY + D L LA E GL+ DE ++ I NG+ K+ +
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 423 TMMVK 427
+VK
Sbjct: 776 VKVVK 780
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 186 RMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCR 245
MK + DI AY LI C+ N A L ++ G P Y LIS +
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL--NPSQPIYNSLISGFRN 701
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G + A L++ ML G D+ TY LIDG K + A EL+ +M
Sbjct: 702 LG-----------NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
+ G P+ + Y ++ S + + V++ +M++ N+ P+ Y +I G
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK-NNVTPNVLIYNAVIAGHYREGN 809
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLV 391
+ EA+ E++D G +P T+ ++
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 34/279 (12%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++ L +QG EA+ +M+ P++ +YN ++ CR N A+ + + G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 227 FWCPPDAFTYTILISSYCRH--------------------------GILTG-CRKATRRR 259
P+ +TY+ILI R+ I+ G C+ +
Sbjct: 509 L--KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
E L ++ K ++YN++IDG K + A+ +E+M G +PN +TY S
Sbjct: 567 AREL--LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 320 LIRYYSATNEIDRAVEVLRDMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
L+ N +D+A+E+ +M+ N G+ +Y +I C+ + A + EL++
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMK--NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682
Query: 379 GGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
G P + Y + G D + +K+G+R
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 180 ASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTIL 239
AS F + + P YN+LI +GN A L ++M G C D TYT L
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC--DLGTYTTL 730
Query: 240 ISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRAL 299
I + G L A L+ M G VPD + Y +++G K + + +
Sbjct: 731 IDGLLKDG-----------NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Query: 300 ELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIH 358
++FE+MKK PN + Y+++I + +D A + +M L+ GI P +++ ++
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM--LDKGILPDGATFDILVS 837
Query: 359 A 359
Sbjct: 838 G 838
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 176 LASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFT 235
LA SL ++ C P Y ++I A + GN A L ++M G +
Sbjct: 284 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGI--SMNVVA 341
Query: 236 YTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRI 295
T LI+ +C++ L A LF M +G P+ VT++ LI+ K +
Sbjct: 342 ATSLITGHCKN-----------NDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEM 390
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
++ALE ++ M+ G P+ ++I+ + + + A+++ + G+ +
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD--ESFETGLANVFVCNT 448
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
I+ LC+ G+ EA L ++ G P +Y V
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 134/332 (40%), Gaps = 56/332 (16%)
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
N+ IT + L+K+L + + AS F M C PD +Y L+ C G A
Sbjct: 149 NSRITALNL--LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 216 KFLLEQMELPGFW------CPPDAFTYTILISSYCRHG-----------ILTGCRKATRR 258
LL M FW D Y IL+ + C G IL KA +R
Sbjct: 207 THLLYSM----FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262
Query: 259 RLY--EAG-------------RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
+ EAG RL L +G +P + +Y+A+ + ++ E+
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M+ KG P Y + ++ ++ AV V+ H +P+ Y +I LC+
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 364 GRVAEAWSFLVELVDGGN-VPREYTYRLVCDKLCLAG---------EDGLL-----GDEV 408
G+ EA +L ++ + V E TY+ + D LC G E+ L+ G E
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 409 HERIKNG---MRKRYKQTMMVKPVMTRKGYPE 437
+ + G M +RY+ M ++ ++++ PE
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P + +Y+ + L G + +L M GF P F Y + + CR G
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF--EPTPFIYGAKVKALCRAG------ 347
Query: 254 KATRRRLYEAGRLFRLMLFKGF-VPDVVTYNALIDGCCKTYRIQRALELFEDMKKK-GCA 311
+L EA + + +G +P V YN LI G C + A+ + M K+ C
Sbjct: 348 -----KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCV 402
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWS 371
N TY +L+ + A +V+ +M +H P +Y +I LC+ R EA
Sbjct: 403 ANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSH-FPGVETYHMMIKGLCDMDRRYEAVM 461
Query: 372 FLVELVDGGNVPREYTYRLVCDKLCLAGED 401
+L E+V VP ++ + + +C D
Sbjct: 462 WLEEMVSQDMVPESSVWKALAESVCFCAID 491
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Query: 168 IKLLGEQGLASEA-SLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+K L G EA S+ M Q HC P + YN LI LC G A L++M
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMS-KQ 398
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C + TY L+ CR G + EA ++ ML K P V TY+ +I
Sbjct: 399 VSCVANEETYQTLVDGLCRDG-----------QFLEASQVMEEMLIKSHFPGVETYHMMI 447
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
G C R A+ E+M + P + +L
Sbjct: 448 KGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 20/242 (8%)
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTL 202
L E A + ++ +N AT +I +LG+ E RMK+ C + ++
Sbjct: 31 LFEEAKERFPSYGHNGSVYAT---MIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE 262
I R G A L + L F C + ++ L+ + L
Sbjct: 88 IRTFSRAGRLEDAISLFKS--LHEFNCVNWSLSFDTLLQEMVKES-----------ELEA 134
Query: 263 AGRLFRLMLFKGFVPDVVT-YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
A +FR + V +T N L+ C+ R A ++F++M +GC P+R +Y L+
Sbjct: 135 ACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILM 194
Query: 322 RYYSATNEIDRAVEVLRDM-QRLNHGIPSSS--SYTPIIHALCEAGRVAEAWSFLVELVD 378
+ + +++ A +L M R++ Y ++ ALC+AG V +A L +++
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 379 GG 380
G
Sbjct: 255 KG 256
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 134/332 (40%), Gaps = 56/332 (16%)
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
N+ IT + L+K+L + + AS F M C PD +Y L+ C G A
Sbjct: 149 NSRITALNL--LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEA 206
Query: 216 KFLLEQMELPGFW------CPPDAFTYTILISSYCRHG-----------ILTGCRKATRR 258
LL M FW D Y IL+ + C G IL KA +R
Sbjct: 207 THLLYSM----FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262
Query: 259 RLY--EAG-------------RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
+ EAG RL L +G +P + +Y+A+ + ++ E+
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M+ KG P Y + ++ ++ AV V+ H +P+ Y +I LC+
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 364 GRVAEAWSFLVELVDGGN-VPREYTYRLVCDKLCLAG---------EDGLL-----GDEV 408
G+ EA +L ++ + V E TY+ + D LC G E+ L+ G E
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 409 HERIKNG---MRKRYKQTMMVKPVMTRKGYPE 437
+ + G M +RY+ M ++ ++++ PE
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P + +Y+ + L G + +L M GF P F Y + + CR G
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF--EPTPFIYGAKVKALCRAG------ 347
Query: 254 KATRRRLYEAGRLFRLMLFKGF-VPDVVTYNALIDGCCKTYRIQRALELFEDMKKK-GCA 311
+L EA + + +G +P V YN LI G C + A+ + M K+ C
Sbjct: 348 -----KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCV 402
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWS 371
N TY +L+ + A +V+ +M +H P +Y +I LC+ R EA
Sbjct: 403 ANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSH-FPGVETYHMMIKGLCDMDRRYEAVM 461
Query: 372 FLVELVDGGNVPREYTYRLVCDKLCLAGED 401
+L E+V VP ++ + + +C D
Sbjct: 462 WLEEMVSQDMVPESSVWKALAESVCFCAID 491
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Query: 168 IKLLGEQGLASEA-SLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+K L G EA S+ M Q HC P + YN LI LC G A L++M
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMS-KQ 398
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C + TY L+ CR G + EA ++ ML K P V TY+ +I
Sbjct: 399 VSCVANEETYQTLVDGLCRDG-----------QFLEASQVMEEMLIKSHFPGVETYHMMI 447
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
G C R A+ E+M + P + +L
Sbjct: 448 KGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 20/242 (8%)
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTL 202
L E A + ++ +N AT +I +LG+ E RMK+ C + ++
Sbjct: 31 LFEEAKERFPSYGHNGSVYAT---MIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE 262
I R G A L + L F C + ++ L+ + L
Sbjct: 88 IRTFSRAGRLEDAISLFKS--LHEFNCVNWSLSFDTLLQEMVKES-----------ELEA 134
Query: 263 AGRLFRLMLFKGFVPDVVT-YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
A +FR + V +T N L+ C+ R A ++F++M +GC P+R +Y L+
Sbjct: 135 ACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILM 194
Query: 322 RYYSATNEIDRAVEVLRDM-QRLNHGIPSSS--SYTPIIHALCEAGRVAEAWSFLVELVD 378
+ + +++ A +L M R++ Y ++ ALC+AG V +A L +++
Sbjct: 195 KGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILR 254
Query: 379 GG 380
G
Sbjct: 255 KG 256
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 126/330 (38%), Gaps = 47/330 (14%)
Query: 101 RKSLEFFRWVEAHSGFTH-DEV-------------------------------TCREMAC 128
R +L F W++++S F+H DE T
Sbjct: 124 RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAID 183
Query: 129 VLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMK 188
LVRA K + F ++ N + ++T ++K L E+G AS A +
Sbjct: 184 RLVRAGRPKQVTDFFEKMENDYGLKR-----DKESLTLVVKKLCEKGHASIAE-KMVKNT 237
Query: 189 QYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGI 248
PD + LI C A L +M GF A Y +++ C+
Sbjct: 238 ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKA--YNMMLDCVCKL-- 293
Query: 249 LTGCRKATRRRLY-EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
CRK +L E ++ M F+G + T+N LI+ CK R + A+ LF M +
Sbjct: 294 ---CRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGE 350
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPIIHALCEAGRV 366
GC P+ TY LIR I E++ M+ +G + + Y + LC R+
Sbjct: 351 WGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERL 410
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
A S + G P TY L+ K+C
Sbjct: 411 EHAMSVFKSMKANGCKPGIKTYDLLMGKMC 440
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 20/235 (8%)
Query: 189 QYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILI-SSYCRHG 247
+ PD+ +YNTLI LC G+F A L++++E G PD T+ IL+ SY
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL--KPDHITFNILLHESY---- 223
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
T+ + E +++ M+ K D+ +YNA + G + + + LF+ +K
Sbjct: 224 --------TKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKG 275
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
P+ T+ ++I+ + + ++D A+ +++++ N P + ++ A+C+AG +
Sbjct: 276 NELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK-NGCRPLKFVFNSLLPAICKAGDLE 334
Query: 368 EAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQ 422
A+ E+ + E + V D L G DE E ++ Y Q
Sbjct: 335 SAYELCKEIFAKRLLVDEAVLQEVVDALV----KGSKQDEAEEIVELAKTNDYLQ 385
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMEL---PGFWCPPDAFTYTILISSYCRHGILT 250
P IR + L LCR ++ L++ EL G++ + +Y+++IS C+ G
Sbjct: 360 PAIRTLSKLSKNLCR---HDKSDHLIKAYELLSSKGYF--SELQSYSLMISFLCKAG--- 411
Query: 251 GCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGC 310
R+ E+ + M +G PDV YNALI+ CCK I+ A +L+++M +GC
Sbjct: 412 --------RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 311 APNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEA 369
N TY+ LIR S E + ++ + M L GI P + Y +I LC+ ++ A
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKM--LERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 370 WSFLVELV--DGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHER 411
+ + D V R V + LC G G + ER
Sbjct: 522 MEVFRKCMERDHKTVTRRVLSEFVLN-LCSNGHSGEASQLLRER 564
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 14/182 (7%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
+ +I L + G E+ MK+ PD+ YN LI A C+ AK L ++M +
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G C + TY +LI G E+ RLF ML +G PD Y +
Sbjct: 461 EG--CKMNLTTYNVLIRKLSEEG-----------EAEESLRLFDKMLERGIEPDETIYMS 507
Query: 285 LIDGCCKTYRIQRALELFED-MKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
LI+G CK +I+ A+E+F M++ R + + A ++LR+ + L
Sbjct: 508 LIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHL 567
Query: 344 NH 345
H
Sbjct: 568 EH 569
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 133/331 (40%), Gaps = 41/331 (12%)
Query: 102 KSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITT 161
K+L FF W + + HD+ M V+ + T+ + + + P
Sbjct: 54 KTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKL--TREYYSIDRIIERLKISGCEIKP--- 108
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
L+++ + +A + M + P+ RA N ++ ++ A + E
Sbjct: 109 RVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEG 168
Query: 222 MELPGFWCPPDAFTYTILISSYCRHG---ILTGCRKATRRRLYEA--------GRLFRL- 269
+ F F++ I +S +C G L G + +R + E G++ RL
Sbjct: 169 IRFRNF------FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLC 222
Query: 270 ---------------MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
M+ G V ++ L+ G ++ Q+A++LF M + GC+PN
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFL 373
VTY SLI+ + +D A VL +Q + G+ P +IH GR EA
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQ--SEGLAPDIVLCNLMIHTYTRLGRFEEARKVF 340
Query: 374 VELVDGGNVPREYTYRLVCDKLCLAGEDGLL 404
L VP +YT+ + LCL+G+ L+
Sbjct: 341 TSLEKRKLVPDQYTFASILSSLCLSGKFDLV 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 40/300 (13%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T T LIK + G+ EA +++ PDI N +I+ R+G F A+ +
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 222 MELPGFWCPPDAFTYTILISSYC-----------RHGI-----------LTGCRKATRRR 259
+E PD +T+ ++SS C HGI L+ C
Sbjct: 343 LEKRKL--VPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYN 400
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK----GCAPNRV 315
Y A ++ +M +K F D TY + C+ + A+++++ + K+ +
Sbjct: 401 SY-ALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSA 459
Query: 316 TYDSLI---RYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
DSLI +Y +A + R + L SYT I L A R+ EA+S
Sbjct: 460 IIDSLIELGKYNTAVHLFKRCI--------LEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTR 432
++ +GG P TYR + LC E + + E I+ G+ V +++R
Sbjct: 512 CCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 19/264 (7%)
Query: 141 GFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYN 200
G+L E N T +IK G +A F M Y PD YN
Sbjct: 485 GYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 201 TLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRL 260
TL+ L + + LE+M G+ D Y +ISS+ + G +L
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGY--VSDCIPYCAVISSFVKLG-----------QL 591
Query: 261 YEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSL 320
A +++ M+ PDVV Y LI+ T +Q+A+ E MK+ G N V Y+SL
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 321 IRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP--IIHALCEAGRVAEAWSFLVELVD 378
I+ Y+ +D A + R + + + YT +I+ E V +A + +
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ 711
Query: 379 GGNVPREYTYRLVCDKLCLAGEDG 402
G E+T+ ++ LC+ ++G
Sbjct: 712 RGE-ANEFTFAMM---LCMYKKNG 731
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
A I+ +KL G+ +A E + M +Y+ PD+ Y LI A GN +A +E
Sbjct: 580 AVISSFVKL-GQLNMAEEV---YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M+ G P ++ Y LI Y + G L R+ L K PDV T
Sbjct: 636 MKEAGI--PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN--------KTQYPDVYT 685
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
N +I+ + +++A +F+ MK++G A N T+ ++ Y + A ++ + M+
Sbjct: 686 SNCMINLYSERSMVRKAEAIFDSMKQRGEA-NEFTFAMMLCMYKKNGRFEEATQIAKQMR 744
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
+ + SY ++ GR EA E+V G P + T++
Sbjct: 745 EMKI-LTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFK 791
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 16/255 (6%)
Query: 115 GFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQ 174
G DEVT + + +A + F K+ + + + +++ T +I G+
Sbjct: 252 GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKS 311
Query: 175 GLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAF 234
G EAS TF RM + P +NT+I+ G L++ M+L C PD
Sbjct: 312 GQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH---CAPDTR 368
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
TY ILIS + ++ + AG F+ M G PD V+Y L+ +
Sbjct: 369 TYNILISLHTKN-----------NDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 354
++ A L +M + T +L R Y ++++ + G SS Y+
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHV--AGNMSSEGYS 475
Query: 355 PIIHALCEAGRVAEA 369
I A E G ++EA
Sbjct: 476 ANIDAYGERGYLSEA 490
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR 258
YNT+I + G A ++M G P T+ +I Y +G
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGI--VPTTVTFNTMIHIYGNNG----------- 347
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
+L E L + M PD TYN LI K I+RA F++MK G P+ V+Y
Sbjct: 348 QLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
+L+ +S + ++ A ++ +M N I + + + EA + ++WS+
Sbjct: 407 TLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQ-SALTRMYVEAEMLEKSWSWFKRFHV 465
Query: 379 GGNVPRE 385
GN+ E
Sbjct: 466 AGNMSSE 472
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+P Y TLI + G A L +M G PD T I++ Y
Sbjct: 219 KPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGM--QPDEVTTGIVLQMY--------- 267
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDV------VTYNALIDGCCKTYRIQRALELFEDMK 306
+KA R +A F+ D TYN +ID K+ +I+ A E F+ M
Sbjct: 268 KKA--REFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
++G P VT++++I Y ++ +++ M+ H P + +Y +I + +
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKL--HCAPDTRTYNILISLHTKNNDI 383
Query: 367 AEAWSFLVELVDGGNVPREYTYR 389
A ++ E+ D G P +YR
Sbjct: 384 ERAGAYFKEMKDDGLKPDPVSYR 406
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I T + + LG G S A ++K+ P++ +NT+I C G A
Sbjct: 758 IRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNH 816
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF--V 276
LE M+ G P+ TYTIL+ S+ G + + LF+G
Sbjct: 817 LESMQKEGI--VPNLVTYTILMKSHIEAGDIESA----------------IDLFEGTNCE 858
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
PD V Y+ L+ G C R AL L +M+K G PN+ +Y+ L++ + AV+V
Sbjct: 859 PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKV 918
Query: 337 LRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
++DM L+ P S ++T +I+ LCE ++ EA + +V G
Sbjct: 919 VKDMAALDIW-PRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 196 IRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKA 255
+ Y +L Y C+ G A A+ L + ME+ G++ D YT L+ YC+ +T
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYV--DKVMYTCLMKEYCKDNNMT----- 289
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
A RL+ M+ + F D +N LI G K + + +F M KKG N
Sbjct: 290 ------MAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVF 343
Query: 316 TYDSLIRYYSATNEIDRAVEVL------RDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
TY +I Y +D A+ + D+ R H YT +I + G + +A
Sbjct: 344 TYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVH------CYTNLIFGFYKKGGMDKA 397
Query: 370 WSFLVELVDGGNVPREYTY 388
L+ ++D G VP TY
Sbjct: 398 VDLLMRMLDNGIVPDHITY 416
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 117/278 (42%), Gaps = 51/278 (18%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T A + +I LG+QG EA TF +M + +PD AY +I R G A L+
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGIL-TGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
E E+ + P +FTYT+LIS + + G++ GC+ + ML G P+
Sbjct: 641 E--EVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDK------------MLEDGLSPN 686
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR--YYSATNEIDRAVEV 336
VV Y ALI K + + LF M + + + Y +L+ + + + R V V
Sbjct: 687 VVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIV 746
Query: 337 ----LRDMQRL--------------NHG----------------IPSSSSYTPIIHALCE 362
+ +QRL N+G IP+ + II C
Sbjct: 747 EPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCA 806
Query: 363 AGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
AGR+ EA++ L + G VP TY ++ AG+
Sbjct: 807 AGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD 844
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 38/263 (14%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
TCL+K + + A + RM + D +NTLI+ ++G + + + QM
Sbjct: 276 TCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIK 335
Query: 225 PGFWCPPDAFTYTILISSYCRHGIL----------TGCRKATRR---------RLYEAG- 264
G + FTY I+I SYC+ G + TG +R Y+ G
Sbjct: 336 KGV--QSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG 393
Query: 265 -----RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDS 319
L ML G VPD +TY L+ K + ++ A+ + + + GC N D
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD 453
Query: 320 LIRYYSATNEIDRAVE-VLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
L I+ VE +L ++ R + + ++ + ALC A S + ++V+
Sbjct: 454 L-------GNIEVKVESLLGEIARKDANL-AAVGLAVVTTALCSQRNYIAALSRIEKMVN 505
Query: 379 GGNVPREYTYRLVCDKLCLAGED 401
G P ++Y V CL E+
Sbjct: 506 LGCTPLPFSYNSVIK--CLFQEN 526
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Query: 209 VGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFR 268
+GN+ F +E + P+ + + +I+ YC G RL EA
Sbjct: 770 LGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAG-----------RLDEAYNHLE 818
Query: 269 LMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATN 328
M +G VP++VTY L+ + I+ A++LFE C P++V Y +L++
Sbjct: 819 SMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFK 875
Query: 329 EIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
A+ ++ +MQ+ GI P+ SY ++ LC + EA + ++ PR
Sbjct: 876 RPLDALALMLEMQK--SGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSIN 933
Query: 388 YRLVCDKLC 396
+ + LC
Sbjct: 934 HTWLIYILC 942
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+IK L ++ + + + +++ PD+ Y ++ LC+ + A +++ ME G
Sbjct: 518 VIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELG 577
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
P Y+ +I S + G R+ EA F ML G PD + Y +I
Sbjct: 578 L--RPTVAIYSSIIGSLGKQG-----------RVVEAEETFAKMLESGIQPDEIAYMIMI 624
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
+ + RI A EL E++ K P+ TY LI + +++ + L M L G
Sbjct: 625 NTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKM--LEDG 682
Query: 347 I-PSSSSYTPIIHALCEAG 364
+ P+ YT +I + G
Sbjct: 683 LSPNVVLYTALIGHFLKKG 701
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 21/290 (7%)
Query: 94 HRVDLGLRKSLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNN 153
+R +L + FF W G T D + V++RA + L+ F+ +
Sbjct: 125 NRGNLSGEAMVTFFDWAVREPGVTKDVGS----YSVILRALGRRKLFSFMMDVLKGMVCE 180
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
N + TI + A F + + + ++N L+ LC + +
Sbjct: 181 GVNPDLECLTIA--MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVS 238
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
AK + + P D+ +Y I+IS + + G + E ++ + M+
Sbjct: 239 AAKSVFNAKKGN---IPFDSCSYNIMISGWSKLG-----------EVEEMEKVLKEMVES 284
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
GF PD ++Y+ LI+G +T RI ++E+F+++K KG P+ Y+++I + + + D +
Sbjct: 285 GFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDES 344
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
+ R M P+ +Y+ ++ L + +V++A E++ G +P
Sbjct: 345 MRYYRRMLD-EECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 27/189 (14%)
Query: 179 EASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+ S+ +YR M C P++ Y+ L+ L + + A + E+M G P T
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVL--PTTGLVT 399
Query: 238 ILISSYCRHG------IL------TGCR------KATRRRLYEAGRLFRL------MLFK 273
+ C +G ++ GCR K +RL G+ L M
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G+ DV Y ++DG C ++ A+ + E+ +KG PNR Y L A+N+ + A
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Query: 334 VEVLRDMQR 342
++ +++
Sbjct: 520 YKLFLKIKK 528
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 163 TITCLIKLLGE-QGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
+ TCLI G + ++ A+ F RMK+ +P +Y LI+A G +A E+
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M G P TYT ++ ++ R G TG +L E +++LML + +T
Sbjct: 511 MCKEG--IKPSVETYTSVLDAFRRSGD-TG-------KLME---IWKLMLREKIKGTRIT 557
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
YN L+DG K A ++ + K G P+ +TY+ L+ Y+ + + ++L++M
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
LN P S +Y+ +I+A A+ + +V G VP +Y
Sbjct: 618 ALNLK-PDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 129/324 (39%), Gaps = 59/324 (18%)
Query: 119 DEVTCREMACVLVRAN-ATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLA 177
D VTC + L +A + K +W ++ + K ++ L+K ++GL
Sbjct: 307 DNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQD------VFGGLVKSFCDEGLK 360
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA + M++ R + YNTL+ A + + + L +M G P A TY
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL--KPSAATYN 418
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
IL+ +Y R R + L R M G P+V +Y LI +T ++
Sbjct: 419 ILMDAYAR-----------RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Query: 298 -ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTP 355
A + F MKK G P+ +Y +LI YS + ++A +M + GI PS +YT
Sbjct: 468 MAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK--EGIKPSVETYTS 525
Query: 356 IIHAL---CEAGRVAEAWSFLVE------------LVDG--------------------G 380
++ A + G++ E W ++ L+DG G
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG 585
Query: 381 NVPREYTYRLVCDKLCLAGEDGLL 404
P TY ++ + G+D L
Sbjct: 586 LQPSVMTYNMLMNAYARGGQDAKL 609
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 23/265 (8%)
Query: 164 ITC--LIKLLGEQG-LASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+TC LI L + G A E F +M + + + L+ + C G A +
Sbjct: 309 VTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQT 368
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+ME G + Y L+ +Y + + E LF M KG P
Sbjct: 369 EMEKKGIRS--NTIVYNTLMDAYNKSN-----------HIEEVEGLFTEMRDKGLKPSAA 415
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI-DRAVEVLRD 339
TYN L+D + + L +M+ G PN +Y LI Y T ++ D A +
Sbjct: 416 TYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR 475
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
M+++ PSS SYT +IHA +G +A++ E+ G P TY V D +G
Sbjct: 476 MKKVGLK-PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSG 534
Query: 400 EDGLLGD----EVHERIKNGMRKRY 420
+ G L + + E+IK G R Y
Sbjct: 535 DTGKLMEIWKLMLREKIK-GTRITY 558
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
R I+ ++ +I++LCR+ N AK LL M G P + +++ + + G
Sbjct: 369 RRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKG--PAPGNAVFNLVVHACSKTG----- 421
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
L EA + +LM +G PDV TY +I G K + A E+ + KKK
Sbjct: 422 ------DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKL 475
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALC 361
+ VTY +LIR Y E D A+++L +M R G+ P++ Y +I + C
Sbjct: 476 SPVTYHALIRGYCKIEEYDEALKLLNEMDRF--GVQPNADEYNKLIQSFC 523
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG------ 247
P +N +++A + G+ AK +L+ ME G PD +TYT++IS Y + G
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGL--KPDVYTYTVIISGYAKGGMMDEAQ 462
Query: 248 -ILTGCRKATRR----------RLY-------EAGRLFRLMLFKGFVPDVVTYNALIDG- 288
IL +K ++ R Y EA +L M G P+ YN LI
Sbjct: 463 EILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Query: 289 CCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
C K ++A LFE+MK+KG N ++ LIR A E++ +V D
Sbjct: 523 CLKALDWEKAEVLFEEMKQKGLHLNAIS-QGLIR---AVKEMESEAKVTED 569
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 138/344 (40%), Gaps = 35/344 (10%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANATKT-------LWGFLKETANKHHNNHRN 156
+ F +W + T VT + +LV A A+ T LW +KE K N
Sbjct: 175 IRFLKWATQNEEIT---VTTSLVESLLV-AIASDTRRMDAYGLWDLVKEIGEKESCGVLN 230
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK 216
I + LI L G+ G + A F + +++ P+ + Y + ALC+ A
Sbjct: 231 LEI----LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWAC 286
Query: 217 FLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFV 276
+ E+M G + +I+ +C+ G + +YE + L FV
Sbjct: 287 SVCEKMLKSGVLSEGEQMGN--IITWFCKEG-----KAEEAYSVYELAKTKEKSLPPRFV 339
Query: 277 PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
++T DG T+ + +L + +++G P SL R + + A +
Sbjct: 340 ATLITALCKNDGTI-TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRN----VKDAKAL 394
Query: 337 LRDMQRLNHG-IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
L DM ++ G P ++ + ++HA + G + EA L + G P YTY ++
Sbjct: 395 LLDM--ISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGY 452
Query: 396 CLAGEDGLLGDEVHERIKNGMRKRYKQTMMVKPVMTRKGYPEIE 439
G + DE E + +K K + + + R GY +IE
Sbjct: 453 AKGG----MMDEAQEILAEAKKKHKKLSPVTYHALIR-GYCKIE 491
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 189 QYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY-TILISSYCRHG 247
+ +PDI +YNTLI ALC + A LL+++E G PD T+ T+L+SSY +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGL--KPDIVTFNTLLLSSYLKGQ 230
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
G ++ M+ K D+ TYNA + G + + + LF ++K
Sbjct: 231 FELG------------EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKA 278
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRV 366
G P+ +++++IR ++D A +++ + HG P +++ ++ A+C+AG
Sbjct: 279 SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI--VKHGYRPDKATFALLLPAMCKAGDF 336
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
A E + + T + + D+L
Sbjct: 337 ESAIELFKETFSKRYLVGQTTLQQLVDELV 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 23/257 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I L G+ G+ A F M C+ + ++N L+ A F + L ELPG
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFN--ELPG 172
Query: 227 -FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
PD +Y LI + C + L EA L + KG PD+VT+N L
Sbjct: 173 KLSIKPDIVSYNTLIKALCE-----------KDSLPEAVALLDEIENKGLKPDIVTFNTL 221
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN- 344
+ + + E++ M +K A + TY++ R NE ++ E++ L
Sbjct: 222 LLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNA--RLLGLANEA-KSKELVNLFGELKA 278
Query: 345 HGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGL 403
G+ P S+ +I G++ EA ++ E+V G P + T+ L+ +C AG+
Sbjct: 279 SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGD--- 335
Query: 404 LGDEVHERIKNGMRKRY 420
+ E K KRY
Sbjct: 336 -FESAIELFKETFSKRY 351
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 179 EASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA + M K Y PD+ YN +I C G+ + + ++ +ME G P++ ++
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGI--KPNSSSFG 226
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++IS + + E G++ +M +G V TYN I CK + +
Sbjct: 227 LMISGF-----------YAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKE 275
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPI 356
A L + M G PN VTY LI + ++ + A ++ + M +N G P S Y +
Sbjct: 276 AKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM--VNRGCKPDSECYFTL 333
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVP 383
I+ LC+ G A S E ++ VP
Sbjct: 334 IYYLCKGGDFETALSLCKESMEKNWVP 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 177 ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
+ E MK + YN I +LC+ AK LL+ M G P+ TY
Sbjct: 238 SDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM--KPNTVTY 295
Query: 237 TILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
+ LI +C EA +LF++M+ +G PD Y LI CK +
Sbjct: 296 SHLIHGFCNED-----------DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFE 344
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
AL L ++ +K P+ SL+ + ++++ A E++
Sbjct: 345 TALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G PD+ TYN +I C++ + + +M++KG PN ++ +I + A ++ D
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 334 VEVLRDMQR--LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
+VL M+ +N G+ S+Y I +LC+ + EA + L ++ G P TY +
Sbjct: 242 GKVLAMMKDRGVNIGV---STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHL 298
Query: 392 CDKLC 396
C
Sbjct: 299 IHGFC 303
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
++G A + + MK+ C Y I A CR+ + +A+ L ++M GF
Sbjct: 366 QRGFAEAVKVYEWAMKE-ECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGF--DKC 422
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
Y+ ++ Y + RRL +A RL M +G P++ YN+LID +
Sbjct: 423 VVAYSNIMDMYGKT-----------RRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
++RA +++++MK+ P++V+Y S+I Y+ + E++R VE+ ++ R+N G +
Sbjct: 472 MDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEF-RMNRGKIDRAM 530
Query: 353 YTPIIHALCEAGRVAEAWSFLVEL-VDG 379
++ + R+ E L ++ V+G
Sbjct: 531 AGIMVGVFSKTSRIDELMRLLQDMKVEG 558
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++ + G+ S+A +MKQ C+P+I YN+LI R + RA+ + ++M+
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PD +YT +IS+Y R L C + LY+ R+ R + D ++
Sbjct: 489 VL--PDKVSYTSMISAYNRSKELERCVE-----LYQEFRMNRGKI------DRAMAGIMV 535
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
KT RI + L +DMK +G + Y S +
Sbjct: 536 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSAL 570
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
++ +F+ M G +P+ V A++DG CK +Q A++LF M+ KG P V Y +++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ ++I+ A + R MQ N+GI P++ SY ++ L + +A +F E+++ G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQ--NNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 381 NVPREYTYRLVCDKLC 396
+ P T+ + D LC
Sbjct: 232 HSPNVPTFVELVDALC 247
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
++ C+ G++ EA +LF LM KG +P+VV Y A+++ CK ++I+ A
Sbjct: 137 MLDGLCKDGLVQ-----------EAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+F M+ G APN +Y L++ N +D AV +M H P+ ++ ++
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS-PNVPTFVELVD 244
Query: 359 ALCEAGRVAEAWSFLVELVDGG 380
ALC V +A S + L G
Sbjct: 245 ALCRVKGVEQAQSAIDTLNQKG 266
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
++ L + GL EA F M+ P++ Y ++ A C+ AK + +M+
Sbjct: 135 VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G P+AF+Y +L+ L C L +A ML G P+V T+
Sbjct: 195 NGIA--PNAFSYGVLVQG------LYNCN-----MLDDAVAFCSEMLESGHSPNVPTFVE 241
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPN 313
L+D C+ +++A + + +KG A N
Sbjct: 242 LVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
++ +F+ M G +P+ V A++DG CK +Q A++LF M+ KG P V Y +++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ ++I+ A + R MQ N+GI P++ SY ++ L + +A +F E+++ G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQ--NNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 381 NVPREYTYRLVCDKLC 396
+ P T+ + D LC
Sbjct: 232 HSPNVPTFVELVDALC 247
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
++ C+ G++ EA +LF LM KG +P+VV Y A+++ CK ++I+ A
Sbjct: 137 MLDGLCKDGLVQ-----------EAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
+F M+ G APN +Y L++ N +D AV +M H P+ ++ ++
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS-PNVPTFVELVD 244
Query: 359 ALCEAGRVAEAWSFLVELVDGG 380
ALC V +A S + L G
Sbjct: 245 ALCRVKGVEQAQSAIDTLNQKG 266
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
++ L + GL EA F M+ P++ Y ++ A C+ AK + +M+
Sbjct: 135 VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G P+AF+Y +L+ L C L +A ML G P+V T+
Sbjct: 195 NGIA--PNAFSYGVLVQG------LYNCN-----MLDDAVAFCSEMLESGHSPNVPTFVE 241
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPN 313
L+D C+ +++A + + +KG A N
Sbjct: 242 LVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 102/257 (39%), Gaps = 17/257 (6%)
Query: 164 ITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME 223
I +I L G+ G+ +A TF+ M Y C+ ++++N + L + L
Sbjct: 109 IVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAP 168
Query: 224 LPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
+ DA ++ I I S+C GIL G A R M G PDVVTY
Sbjct: 169 -SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMRE-----------MEKSGLTPDVVTYT 216
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
LI K R L+ M KGC PN T++ I++ A ++L M +L
Sbjct: 217 TLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKL 276
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGL 403
P S +Y +I A A + G P Y+ + LC AG
Sbjct: 277 QVE-PDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGN--- 332
Query: 404 LGDEVHERIKNGMRKRY 420
D + K+ MRK++
Sbjct: 333 -FDLAYTMCKDCMRKKW 348
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 49/238 (20%)
Query: 138 TLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIR 197
T+W FL + +K+ + I + IK E G+ A + M++ PD+
Sbjct: 159 TIWEFLHDAPSKYGID-----IDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVV 213
Query: 198 AYNTLIYAL-----CRVGNF------------------ARAKFLLEQ----------MEL 224
Y TLI AL C +GN R +FL+ + + +
Sbjct: 214 TYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLM 273
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
P PD+ TY ++I + R A R++ M KG+ P++ Y
Sbjct: 274 PKLQVEPDSITYNMVIKGFF-----------LARFPDMAERVYTAMHGKGYKPNLKIYQT 322
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+I CK A + +D +K PN T + L++ ++D+A ++ + R
Sbjct: 323 MIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHR 380
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T +++ L E G E +MK PD+ Y ++ + ++ +A L + EL
Sbjct: 255 TVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD--EL 312
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
PD +TY + I+ C+ + G A ++ M G P+VVTYN
Sbjct: 313 LLLGLAPDVYTYNVYINGLCKQNDIEG-----------ALKMMSSMNKLGSEPNVVTYNI 361
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
LI K + RA L+++M+ G N T+D +I Y +E+ A +L + +N
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 345 HGIPSSSSYTPIIHALCEAGRVAEAWSFLVELV 377
+ SS +I LCE G + +A L LV
Sbjct: 422 VFV-KSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P +R Y ++ L G +L QM+ PD YTI++ G++
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRV--EPDLVCYTIVL-----QGVIAD-- 299
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
+A +LF +L G PDV TYN I+G CK I+ AL++ M K G PN
Sbjct: 300 ----EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSF 372
VTY+ LI+ ++ RA + ++M+ +G+ +S ++ +I A E V A
Sbjct: 356 VVTYNILIKALVKAGDLSRAKTLWKEME--TNGVNRNSHTFDIMISAYIEVDEVVCAHGL 413
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVH 409
L E + + V +LC E GL+ V
Sbjct: 414 LEEAFNMNVFVKSSRIEEVISRLC---EKGLMDQAVE 447
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 127/295 (43%), Gaps = 26/295 (8%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRA-NATKTLWGFLKETANKHHNNHRNNPITTA 162
++ F W++ H + V+ V A N +K L + + + N I +
Sbjct: 118 IQLFEWMQQHGKIS---VSTYSSCIKFVGAKNVSKALEIY---QSIPDESTKINVYICNS 171
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGN-FARAKFLLEQ 221
++CL+K G F +MK+ +PD+ YNTL+ +V N + +A L+
Sbjct: 172 ILSCLVK----NGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIG- 226
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
ELP D+ Y +L C A+ R EA + M +G P++
Sbjct: 227 -ELPHNGIQMDSVMYGT---------VLAIC--ASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
Y++L++ ++A EL +MK G PN+V +L++ Y DR+ E+L +++
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+ + Y ++ L +AG++ EA S ++ G Y ++ LC
Sbjct: 335 SAGYA-ENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 151 HNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
HN + + + T+ + + G + EA +MK P+I Y++L+ + G
Sbjct: 230 HNGIQMDSVMYGTV---LAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKG 286
Query: 211 NFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM 270
++ +A L+ +M+ G P+ T L+ Y + G+ R+ L +
Sbjct: 287 DYKKADELMTEMKSIGLV--PNKVMMTTLLKVYIKGGLFDRSRE-----------LLSEL 333
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
G+ + + Y L+DG K +++ A +F+DMK KG + +I +
Sbjct: 334 ESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRF 393
Query: 331 DRAVEVLRDMQ 341
A E+ RD +
Sbjct: 394 KEAKELSRDSE 404
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 132/335 (39%), Gaps = 59/335 (17%)
Query: 87 PAAYRDPHRVDLGLRKSLEFFRWVEAH-SGFTHDEVTCREMACVLVRANATKTLWGFLKE 145
P ++R HR FF + + H FTH T +M ++ + W +E
Sbjct: 88 PLSWRPVHR----------FFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQE 137
Query: 146 TANKHHNNHRNNPITTATIT-------CL---------------------IKLLGEQGLA 177
+ N + I T+ C+ ++ L ++ L
Sbjct: 138 IGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLV 197
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA F ++K++ +PD Y T+I C VG+ A L M GF +A
Sbjct: 198 EEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEA---- 252
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK-GFVPDVVTYNALIDGCCKTYRIQ 296
I+ K + + EA ++F +M+ K G D Y +ID CK RI
Sbjct: 253 -------GKKIMETLLK--KNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRID 303
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPI 356
A ++F++M+++G + +T+ SLI + A ++ ++ P S Y +
Sbjct: 304 MARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN-----PDISIYHGL 358
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
I L + R +EA +++ G P +TY ++
Sbjct: 359 IKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLML 393
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 106/302 (35%), Gaps = 51/302 (16%)
Query: 105 EFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATI 164
+FF W G+ HD A L R F + + P +
Sbjct: 143 KFFHWAGKQKGYKHDFAAYNAFAYCLNRNGH------FRAADQLPELMDSQGRPPSEKQF 196
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
LI++ + + +MK++ +P + YN ++ AL + G F A + E +
Sbjct: 197 EILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKE 256
Query: 225 PGF---------------------------------WCPPDAFTYTILISSYCRHGILTG 251
G C PD F YT +I + G L
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 252 CRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
+ R++ M PDV+ Y L+ G CK R++R ELF +MK K
Sbjct: 317 -----------SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL 365
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWS 371
+R Y LI + A ++ A + D+ + I Y +I LC +V +A+
Sbjct: 366 IDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY-IADIGIYNAVIKGLCSVNQVDKAYK 424
Query: 372 FL 373
Sbjct: 425 LF 426
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T +IK L +G + + M++ +PD+ AY TL+ LC+ G R L ME+
Sbjct: 302 TAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELF--MEM 359
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G D Y +LI + G ++ A L+ ++ G++ D+ YNA
Sbjct: 360 KGKQILIDREIYRVLIEGFVADG-----------KVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
+I G C ++ +A +LF+ ++ P+ T ++ Y N + VL + L
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL- 467
Query: 345 HGIPSSSSYTPIIHALC 361
G P S T LC
Sbjct: 468 -GYPVSDYLTQFFKLLC 483
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 109/277 (39%), Gaps = 51/277 (18%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+T + + ++KL + +A A + KQ + D AYN Y L R G+F A L
Sbjct: 123 VTPSIVAEVLKLGNDAAVA--AKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL 180
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
E M+ G PP + ILI + A RR ++ M GF P
Sbjct: 181 PELMDSQGR--PPSEKQFEILIRMH-----------ADNRRGLRVYYVYEKMKKFGFKPR 227
Query: 279 VVTYNALID-----------------------------------GCCKTYRIQRALELFE 303
V YN ++D G CK RI+ LE+ +
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
M++ C P+ Y ++I+ + +D ++ V +M+R + P +Y ++ LC+
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR-DEIKPDVMAYGTLVVGLCKD 346
Query: 364 GRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
GRV + +E+ + YR++ + G+
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGK 383
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 17/235 (7%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
+ T L+K L + G E RM++ C+PD+ AY +I L GN + + +
Sbjct: 263 STTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWD 322
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
+M PD Y L+ C+ G R+ LF M K + D
Sbjct: 323 EMRRDEI--KPDVMAYGTLVVGLCKDG-----------RVERGYELFMEMKGKQILIDRE 369
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
Y LI+G +++ A L+ED+ G + Y+++I+ + N++D+A ++ + +
Sbjct: 370 IYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ-V 428
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT---YRLVC 392
P + +PI+ A R+++ + L + + G +Y ++L+C
Sbjct: 429 AIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLC 483
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 102 KSLEFFRWVEAHSG---FTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNP 158
K+L FF WV + H VT VL R N+ W + E ++ +
Sbjct: 242 KALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTY 301
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I + + + + +E + M +P I+ + L+ L N
Sbjct: 302 IKVS------RQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPN------- 348
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHG------ILTGCRKATRR--RLYEAGRLFRLM 270
PD + Y G + G ++ R EA + + M
Sbjct: 349 ------------PDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAM 396
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
G+ PD +TY+ L+ G CK R++ A + + M+ +GC P+ T+ LI+ + NE+
Sbjct: 397 RNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNEL 456
Query: 331 DRAVEVLRDMQRLNHGIPSSSSYTPI-IHALCEAGRVAEAWSFLVELVDGGNV-PREYTY 388
D+A+ +M L G S+ + I + A FL+E+V NV P + TY
Sbjct: 457 DKALACFANM--LEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTY 514
Query: 389 RLVCDKL 395
+L+ DKL
Sbjct: 515 KLLIDKL 521
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 32/240 (13%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
++ A + + L G EA M+ PD Y+ L++ LC+ A+ +
Sbjct: 368 LSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGV 427
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILT---GCRKATRRRLYEAGRLFRLMLFKGF 275
L+QME G C PD T+TILI +C++ L C + ++ +L GF
Sbjct: 428 LDQMEAQG--CFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
Query: 276 V----------------------PDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
V P TY LID K + + AL+L + MKK+
Sbjct: 486 VIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAY 545
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
+D + + + + ++VL + PS ++Y +I A GR+ +A + L
Sbjct: 546 AEAFDGYLAKFGTLEDAKKFLDVLS-----SKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 19/235 (8%)
Query: 154 HRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFA 213
H N + I C + L E S TF M +Y P+ +N L+ + F
Sbjct: 661 HWNQEMYNCVINCCARALP----LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFK 716
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
+ L + G D +Y +I++Y ++ T A + M F
Sbjct: 717 KVNELFLLAKRHGV---VDVISYNTIIAAYGKNKDYTNMSSAIKN-----------MQFD 762
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
GF + YN L+D K ++++ + + MKK P+ TY+ +I Y ID
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+VL++++ G P SY +I A G V EA + E+ +P + TY
Sbjct: 823 ADVLKELKESGLG-PDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 103/278 (37%), Gaps = 32/278 (11%)
Query: 103 SLEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTA 162
+++FF W+ + + V + VL R +KE H T
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
C ++G AS F+ M ++ RP++ L+ + N A+F M
Sbjct: 217 IYACT-----KKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGI------LTGCRKATRRRLYEAGRLFRL------- 269
G C Y+ +I+ Y R + + K R RL L L
Sbjct: 272 RKFGIVCES---AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQG 328
Query: 270 -----------MLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
M GF P+++ YN LI G K ++++ A LF + G P+ +Y
Sbjct: 329 KMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYR 388
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPI 356
S+I + + + A ++++R + S + +T I
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 15/180 (8%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
MKQ R + + ++ A + G A+ +L ME GF P+ Y LI+ Y +
Sbjct: 305 MKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF--SPNIIAYNTLITGYGK- 361
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
++ A LF + G PD +Y ++I+G + + A ++++K
Sbjct: 362 ----------IFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELK 411
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
+ G PN +LI + + D A++ + DM + G SS I+ A + G++
Sbjct: 412 RCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGI--GCQYSSILGIILQAYEKVGKI 469
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 232 DAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCK 291
D FTYT ++ + G R+ +F LM KG + D VTY +LI
Sbjct: 121 DHFTYTTMLDIFGEAG-----------RIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSS 169
Query: 292 TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSS 351
+ + A+ L+E+M+ GC P V+Y + ++ A ++ A EV ++M R + P+
Sbjct: 170 SGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLR-SRVSPNCH 228
Query: 352 SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHER 411
+YT ++ L G+ EA ++ + G P + ++ K GE + +
Sbjct: 229 TYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYM 288
Query: 412 IKNGMRKRY 420
+NG+ RY
Sbjct: 289 KENGVVLRY 297
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
KGF D TY ++D + RIQ +F MK+KG + VTY SLI + S++ ++D
Sbjct: 115 IKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVD 174
Query: 332 RAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
A+ + +M R N P+ SYT + L GRV EA E++ P +TY ++
Sbjct: 175 GAMRLWEEM-RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 392 CDKLCLAGE 400
+ L G+
Sbjct: 234 MEYLVATGK 242
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T ++ + GE G F+ MK+ D Y +LI+ + G+ A L E+M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
G C P +YT + G R+ EA +++ ML P+ TY
Sbjct: 184 RDNG--CEPTVVSYTAYMKMLFADG-----------RVEEATEVYKEMLRSRVSPNCHTY 230
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
L++ T + + AL++F M++ G P++ + LI
Sbjct: 231 TVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYH-CRPDIRAYNTLIYALCRVGNFARAKFL 218
T T LI + G+ L +A T MK C+PD+ + LI C++G F K +
Sbjct: 178 TIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI 237
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRL------------------ 260
+ +M G C TY +I Y + G+ +
Sbjct: 238 VLEMSYLGVGC--STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGS 295
Query: 261 YEAGRLFRLM-------LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
Y GR R M G PD+ T+N LI K ++ + + M+K+ +
Sbjct: 296 YGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLT 355
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSF 372
VTY+ +I + I++ +V R M+ G+ P+S +Y +++A +AG V + S
Sbjct: 356 TVTYNIVIETFGKAGRIEKMDDVFRKMKY--QGVKPNSITYCSLVNAYSKAGLVVKIDSV 413
Query: 373 LVELVDGGNV 382
L ++V+ V
Sbjct: 414 LRQIVNSDVV 423
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
+T T +I G+ G+ E M + PD+ N++I + N + +
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
+ +L G PD T+ ILI S+ + G+ +K + R F L
Sbjct: 309 YSRFQLMGV--QPDITTFNILILSFGKAGMY---KKMCSVMDFMEKRFFSLT-------- 355
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
VTYN +I+ K RI++ ++F MK +G PN +TY SL+ YS + + VLR
Sbjct: 356 TVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLR 415
Query: 339 DMQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
Q +N + + + II+A +AG +A +++ + P + T+
Sbjct: 416 --QIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITF 464
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 185 YRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYC 244
+R + P + +N L+ + A+ +L ++ G D YT LISS
Sbjct: 456 FRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTA--DCKLYTTLISSCA 513
Query: 245 RHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFED 304
+ G + ++E +F M G ++ T+ ALIDGC + ++ +A +
Sbjct: 514 KSGKVDA--------MFE---VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGI 562
Query: 305 MKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEA 363
++ K P+RV +++LI + +DRA +VL +M+ H I P S ++ A C A
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 364 GRVAEA 369
G+V A
Sbjct: 623 GQVERA 628
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 20/237 (8%)
Query: 166 CLIKLLGEQGLASEASLTFYRMK--QYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME 223
LI G+ G A MK + PD + L+ A C G RAK + + +
Sbjct: 577 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIH 636
Query: 224 LPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYN 283
G P+ YTI ++S C K+ A +++ M K PD V ++
Sbjct: 637 KYGIRGTPE--VYTIAVNS---------CSKSGDWDF--ACSIYKDMKEKDVTPDEVFFS 683
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
ALID + A + +D K +G ++Y SL+ + +A+E+ ++ +
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
P+ S+ +I ALCE ++ +A +L E+ G P TY + L LA E
Sbjct: 744 KLR-PTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM----LMLASE 795
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 177 ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
A E T K+ +PD + Y+ +IY + GN+ +A+ + M G P TY
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG--VPQSTVTY 285
Query: 237 TILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
L+S + E +++ M PDVV+Y LI + R +
Sbjct: 286 NSLMSFETSYK--------------EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 331
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPI 356
AL +FE+M G P Y+ L+ ++ + +++A V + M+R + P SYT +
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR-DRIFPDLWSYTTM 390
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ A A + A F + G P TY
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 15/196 (7%)
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
LIK G EA F M RP +AYN L+ A G +AK + + M
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
+ PD ++YT ++S+Y + G K F+ + GF P++VTY L
Sbjct: 379 RIF--PDLWSYTTMLSAYVNASDMEGAEK-----------FFKRIKVDGFEPNIVTYGTL 425
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
I G K +++ +E++E M+ G N+ +++ A+ ++M+ +
Sbjct: 426 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME--SC 483
Query: 346 GIPSSSSYTPIIHALC 361
G+P ++ +L
Sbjct: 484 GVPPDQKAKNVLLSLA 499
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 20/236 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI G+ G + A + + P++ +Y L+ + R G A+ + +M+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG---FVPDVVTYN 283
P A TY I++ ++ + EA +F +L + PD Y+
Sbjct: 205 --PEPSAITYQIILKTFVEGD-----------KFKEAEEVFETLLDEKKSPLKPDQKMYH 251
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+I K ++A ++F M KG + VTY+SL+ + ++ E+ + + MQR
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRS 308
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ P SY +I A A R EA S E++D G P Y ++ D ++G
Sbjct: 309 DIQ-PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
P +T T L+ + E S + +M++ +PD+ +Y LI A R A
Sbjct: 279 PQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 335
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
+ E+M G P Y IL+ ++ G++ +A +F+ M P
Sbjct: 336 VFEEMLDAG--VRPTHKAYNILLDAFAISGMVE-----------QAKTVFKSMRRDRIFP 382
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
D+ +Y ++ ++ A + F+ +K G PN VTY +LI+ Y+ N++++ +EV
Sbjct: 383 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 442
Query: 338 RDMQRLNHGIPSSSSYTPIIHA 359
M RL+ + + T I+ A
Sbjct: 443 EKM-RLSGIKANQTILTTIMDA 463
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 177 ASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
A E T K+ +PD + Y+ +IY + GN+ +A+ + M G P TY
Sbjct: 235 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG--VPQSTVTY 292
Query: 237 TILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQ 296
L+S + E +++ M PDVV+Y LI + R +
Sbjct: 293 NSLMSFETSYK--------------EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 338
Query: 297 RALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPI 356
AL +FE+M G P Y+ L+ ++ + +++A V + M+R + P SYT +
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR-DRIFPDLWSYTTM 397
Query: 357 IHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ A A + A F + G P TY
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 16/219 (7%)
Query: 144 KETANKHHNNHRNN-PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTL 202
KE + + R++ + LIK G EA F M RP +AYN L
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE 262
+ A G +AK + + M + PD ++YT ++S+Y + G K
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIF--PDLWSYTTMLSAYVNASDMEGAEK-------- 412
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
F+ + GF P++VTY LI G K +++ +E++E M+ G N+ +++
Sbjct: 413 ---FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Query: 323 YYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALC 361
A+ ++M+ + G+P ++ +L
Sbjct: 470 ASGRCKNFGSALGWYKEME--SCGVPPDQKAKNVLLSLA 506
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 20/236 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI G+ G + A + + P++ +Y L+ + R G A+ + +M+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKG---FVPDVVTYN 283
P A TY I++ ++ + EA +F +L + PD Y+
Sbjct: 212 --PEPSAITYQIILKTFVEGD-----------KFKEAEEVFETLLDEKKSPLKPDQKMYH 258
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+I K ++A ++F M KG + VTY+SL+ + ++ E+ + + MQR
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRS 315
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ P SY +I A A R EA S E++D G P Y ++ D ++G
Sbjct: 316 DIQ-PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
P +T T L+ + E S + +M++ +PD+ +Y LI A R A
Sbjct: 286 PQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 342
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
+ E+M G P Y IL+ ++ G++ +A +F+ M P
Sbjct: 343 VFEEMLDAG--VRPTHKAYNILLDAFAISGMVE-----------QAKTVFKSMRRDRIFP 389
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
D+ +Y ++ ++ A + F+ +K G PN VTY +LI+ Y+ N++++ +EV
Sbjct: 390 DLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVY 449
Query: 338 RDMQRLNHGIPSSSSYTPIIHA 359
M RL+ + + T I+ A
Sbjct: 450 EKM-RLSGIKANQTILTTIMDA 470
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 130/357 (36%), Gaps = 69/357 (19%)
Query: 104 LEFFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTAT 163
L+FF W GF H T + +L A + FL + H +
Sbjct: 130 LKFFDWAARQPGFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRH-----SLRL 184
Query: 164 ITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQME 223
L+ G A F M+ D Y+ L+ AL F + +Q+
Sbjct: 185 CDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQIS 244
Query: 224 LPGFWCPPDAFTYTILISSYCRHGIL---------------TGCRKA---------TRRR 259
+ GF C A T++IL+ +C+ G L GC ++R+
Sbjct: 245 VRGFVC---AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRK 301
Query: 260 LYEAGRLF-------------------RLMLFKGFVP-----------------DVVTYN 283
EA +L R ++ GF+ +V YN
Sbjct: 302 FQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYN 361
Query: 284 ALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRL 343
+++ K + ++ +M +G +PN+ T ++ + ++ +D A+E+ R +
Sbjct: 362 SMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEI 421
Query: 344 NHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
P++ SY +IH LC V +A+ L +D G+ T+ + + LC G+
Sbjct: 422 GFA-PTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGK 477
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 22/309 (7%)
Query: 119 DEVTCREMACVLVRANATKTL--WGFLKETANKHHNNHRNNPITTAT-ITCLIKLLGEQG 175
D+++ R C + + K G L E + N+P + + L+ L +
Sbjct: 241 DQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKR 300
Query: 176 LASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFAR-AKFLLEQMELPGFWCPPDAF 234
EA+ +K RAYN I AL + G A FL + L G C + F
Sbjct: 301 KFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEG--CELEVF 358
Query: 235 TYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYR 294
Y ++ + L G +Y+ + M+ +G P+ T NA + CK
Sbjct: 359 RYNSMVFQLLKENNLDG--------VYD---ILTEMMVRGVSPNKKTMNAALCFFCKAGF 407
Query: 295 IQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYT 354
+ ALEL+ + G AP ++Y+ LI A +++A +VL+ H + +++
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFL-GGKTFS 466
Query: 355 PIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG--EDGLLGDEVHERI 412
+ +ALC G+ A ++ + +P+ + LC G ED L+ +E+
Sbjct: 467 TLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFN-- 524
Query: 413 KNGMRKRYK 421
K+G+ +K
Sbjct: 525 KSGVDTSFK 533
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 41/216 (18%)
Query: 176 LASEASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM------------ 222
L S+ L R M+ + PD+ Y +I C + + + L + M
Sbjct: 677 LNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY 736
Query: 223 --------------ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFR 268
E+ F PD F YT+LI C+ G L EA R+F
Sbjct: 737 TVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIG-----------DLGEAKRIFD 785
Query: 269 LMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATN 328
M+ G PD Y ALI CCK ++ A +F+ M + G P+ V Y +LI
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG 845
Query: 329 EIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEA 363
+ +AV+++++M L GI P+ +S + + +A +A
Sbjct: 846 FVLKAVKLVKEM--LEKGIKPTKASLSAVHYAKLKA 879
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 183 TFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISS 242
F +M + R + ++++ C++GNF+ A L ++ D Y + +
Sbjct: 348 VFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNI--SLDRVCYNVAFDA 405
Query: 243 YCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELF 302
+ G ++ EA LFR M KG PDV+ Y LI GCC + A +L
Sbjct: 406 LGKLG-----------KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 303 EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALC 361
+M G P+ V Y+ L + A E L+ M+ N G+ P+ ++ +I L
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME--NRGVKPTYVTHNMVIEGLI 512
Query: 362 EAGRVAEAWSF 372
+AG + +A +F
Sbjct: 513 DAGELDKAEAF 523
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 198 AYNTLIYALCRVGNF-ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKAT 256
Y TL +LC ++ ++A+ LL++M G P+ Y LI ++CR + RKA
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLG--VEPEKSMYGKLIGAWCR---VNNVRKAR 620
Query: 257 RRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVT 316
F +++ K VPD+ TY +I+ C+ ++A LFEDMK++ P+ VT
Sbjct: 621 E--------FFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 317 YDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
Y L+ D +++ R+M+ + IP YT +I+ C + + ++ ++
Sbjct: 673 YSVLLNS-------DPELDMKREMEAFDV-IPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 377 VDGGNVPREYTYRLV 391
VP TY ++
Sbjct: 725 KRREIVPDVVTYTVL 739
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 18/218 (8%)
Query: 159 ITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFL 218
I ++ +++ + G SEA F ++ + D YN AL ++G A L
Sbjct: 359 INCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
+M G PD YT LI C G + +A L M G PD
Sbjct: 419 FREMTGKGI--APDVINYTTLIGGCCLQG-----------KCSDAFDLMIEMDGTGKTPD 465
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+V YN L G Q A E + M+ +G P VT++ +I E+D+A
Sbjct: 466 IVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYE 525
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
++ S + ++ C AG + A+ + L
Sbjct: 526 SLEH-----KSRENDASMVKGFCAAGCLDHAFERFIRL 558
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 98/260 (37%), Gaps = 45/260 (17%)
Query: 171 LGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCP 230
LG+ G EA F M PD+ Y TLI C G + A L+ +E+ G
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM--IEMDGTGKT 463
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
PD Y +L +G+ EA ++M +G P VT+N +I+G
Sbjct: 464 PDIVIYNVLAGGLATNGLAQ-----------EAFETLKMMENRGVKPTYVTHNMVIEGLI 512
Query: 291 KTYRIQRALELFEDMKKK---------------GCA--------------PNRVTYDSLI 321
+ +A +E ++ K GC P V +
Sbjct: 513 DAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFT 572
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
+ + I +A ++L M +L G+ P S Y +I A C V +A F LV
Sbjct: 573 SLCAEKDYISKAQDLLDRMWKL--GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 381 NVPREYTYRLVCDKLCLAGE 400
VP +TY ++ + C E
Sbjct: 631 IVPDLFTYTIMINTYCRLNE 650
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATR 257
AY ++ LC A+ ++ ME G PD + Y+ I+ G RK
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGI--DPDVYVYS---------AIIEGHRK--N 339
Query: 258 RRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY 317
+ +A +F ML K + V ++++ C+ A +LF++ ++ + +RV Y
Sbjct: 340 MNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCY 399
Query: 318 DSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
+ +++ A+E+ R+M GI P +YT +I C G+ ++A+ ++E+
Sbjct: 400 NVAFDALGKLGKVEEAIELFREMT--GKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM 457
Query: 377 VDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIK 413
G P Y ++ L G L E E +K
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNG----LAQEAFETLK 490
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 94/245 (38%), Gaps = 40/245 (16%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCR-PDIRAYNTLIYALCRVGNFARAKFLLEQME 223
T L+K + EA F+R R PDI+A N LI + G ++E
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE 209
Query: 224 LPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGR---LFRLMLFKGF----V 276
G DA TY +++ + R+ K R L R +F L +G +
Sbjct: 210 RLGL--DADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQM 267
Query: 277 PDV---------------------VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
D+ + Y ++ G C RI+ A + DM+K G P+
Sbjct: 268 TDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVY 327
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDM----QRLNHGIPSSSSYTPIIHALCEAGRVAEAWS 371
Y ++I + I +AV+V M +R+N I SS I+ C+ G +EA+
Sbjct: 328 VYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSS-----ILQCYCQMGNFSEAYD 382
Query: 372 FLVEL 376
E
Sbjct: 383 LFKEF 387
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 21/250 (8%)
Query: 153 NHRNNP-ITTAT-ITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVG 210
+H+NNP I T T ++ LI+ G + A F M + + ++N L+ A
Sbjct: 92 SHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSD 151
Query: 211 NFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM 270
F R L ++ PD +Y +LI SYC G + +A + R M
Sbjct: 152 LFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSG-----------KPEKAMEIMRDM 200
Query: 271 LFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEI 330
KG ++ + ++ K + A L+ +M KGC + Y+ +R +A E
Sbjct: 201 EVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN--VRLMNAAKES 258
Query: 331 -DRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYR 389
+R E++ +M + P + SY ++ A C G ++EA ++ +G P T+R
Sbjct: 259 PERVKELMEEMSSVGLK-PDTVSYNYLMTAYCVKGMMSEAK----KVYEGLEQPNAATFR 313
Query: 390 LVCDKLCLAG 399
+ LC+ G
Sbjct: 314 TLIFHLCING 323
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 127/317 (40%), Gaps = 48/317 (15%)
Query: 107 FRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITC 166
F+W E D+ +C M VL W +++ N + T +
Sbjct: 144 FKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKD-------TRKAMFL 194
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAK-FLLEQMELP 225
++ S+A TF M ++ P A+ L+ ALCR G+ +A+ F+L +L
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL- 253
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATR---------------------------R 258
P D + ++++ +C I T +A R
Sbjct: 254 ---FPVDVEGFNVILNGWC--NIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVG 308
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
L+++ RL+ M +G P + YN+L+ + A++L + + ++G P+ VTY+
Sbjct: 309 NLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYN 368
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
S+IR ++D A VL M N P+ ++ HA EA + L ++
Sbjct: 369 SMIRPLCEAGKLDVARNVLATMISENLS-PTVDTF----HAFLEAVNFEKTLEVLGQMKI 423
Query: 379 GGNVPREYTYRLVCDKL 395
P E T+ L+ KL
Sbjct: 424 SDLGPTEETFLLILGKL 440
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 112/282 (39%), Gaps = 39/282 (13%)
Query: 119 DEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLAS 178
+E+T R M VL + K + L K R P + + ++L E +
Sbjct: 233 NEITIRIMIQVLCKEGRLKEVVDLLDRICGK-----RCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
SL R+ + D Y+ ++YA + G+ A+ + ++M GF ++F YT+
Sbjct: 288 SMSL-LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGF--SANSFVYTV 344
Query: 239 LISSYCRHGILTGCRKATR--RRLYEAG-------------------------RLFRLML 271
+ C G ++A R + E+G +M+
Sbjct: 345 FVRVCCEKG---DVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMV 401
Query: 272 FKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEID 331
+G +P +N ++ K + RA E+ KG P+ TY LIR + N+ID
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 332 RAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFL 373
+A+++ +M+ P + +I LC G+V +L
Sbjct: 462 QALKLFYEMEYRKMS-PGFEVFRSLIVGLCTCGKVEAGEKYL 502
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 16/227 (7%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
TI +I++L ++G E R+ C P + +L++ + + LL+++
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL 295
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ D Y+I++ + + G L RK +F ML +GF + Y
Sbjct: 296 LMKNMVV--DTIGYSIVVYAKAKEGDLVSARK-----------VFDEMLQRGFSANSFVY 342
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ CC+ ++ A L +M++ G +P T++ LI ++ ++ +E M
Sbjct: 343 TVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVM-- 400
Query: 343 LNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTY 388
+ G+ PS S++ ++ ++ + V A L + +D G VP E+TY
Sbjct: 401 VTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTY 447
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
P A+N ++ ++ ++ N RA +L + GF PD TY+ LI G + G
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGF--VPDEHTYSHLI-----RGFIEG-- 457
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
+ +A +LF M ++ P + +LI G C +++ + + MKK+ PN
Sbjct: 458 ----NDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPN 513
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDM 340
YD+LI+ + + A V +M
Sbjct: 514 ADIYDALIKAFQKIGDKTNADRVYNEM 540
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 18/251 (7%)
Query: 173 EQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPD 232
+ G EA M++ P + +N LI ++G A L+++ME G D
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGI--TAD 316
Query: 233 AFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKT 292
FT+T +IS +G+ Y+A +FR M G VP+ VT + + C
Sbjct: 317 VFTWTAMISGLIHNGMR-----------YQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 293 YRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSS 352
I + E+ K G + + +SL+ YS +++ A +V ++ +
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-----KDVYT 420
Query: 353 YTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERI 412
+ +I C+AG +A+ + D P T+ + G++G D
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Query: 413 KNGMRKRYKQT 423
K+G +R T
Sbjct: 481 KDGKVQRNTAT 491
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 25/186 (13%)
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRK--------------------ATRRRLYEAGR 265
G + PD F T L+S Y + G + RK + R E +
Sbjct: 108 GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAK 167
Query: 266 LFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYS 325
LFRLM+ G +PD + ++ GC ++ + + K G + +S++ Y+
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 326 ATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
E+D A + R M+ + ++ ++ A C+ G+ EA + E+ G P
Sbjct: 228 KCGELDFATKFFRRMRERD-----VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGL 282
Query: 386 YTYRLV 391
T+ ++
Sbjct: 283 VTWNIL 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 26/245 (10%)
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGN 211
N R N IT T+ G++G EA F RM K + + +N +I + G
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEG---EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 212 FARAKFLLEQMELPGFWCPPDAFTYTILISSYCR----------HGILT--------GCR 253
A L +M+ F P++ T L+ + HG + +
Sbjct: 505 KDEALELFRKMQFSRFM--PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 254 KATRRRLYEAGRL-FRLMLFKGF-VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCA 311
A ++G + + +F G D++T+N+LI G AL LF MK +G
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 312 PNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWS 371
PNR T S+I + +D +V + H IP+ + +++ A R+ EA
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQ 682
Query: 372 FLVEL 376
F+ E+
Sbjct: 683 FIQEM 687
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 145 ETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIY 204
E A K ++ +N + T +I + G +A F RM+ + RP+I +NT+I
Sbjct: 404 EDARKVFDSVKNKDVYTWN--SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 205 ALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAG 264
+ G+ A L ++ME G + T+ ++I+ Y ++G + EA
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGK-VQRNTATWNLIIAGYIQNG-----------KKDEAL 509
Query: 265 RLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYY 324
LFR M F F+P+ VT +L+ C + E+ + ++ ++L Y
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 569
Query: 325 SATNEIDRAVEVLRDMQ 341
+ + +I+ + + M+
Sbjct: 570 AKSGDIEYSRTIFLGME 586
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
DV+ +N+++ C+ + + A+EL ++M+K+G +P VT++ LI Y+ + D A++++
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 338 RDMQRLNHGIPSSS-SYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
+ M+ GI + ++T +I L G +A ++ G VP T
Sbjct: 306 QKMETF--GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
Query: 179 EASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
EA+ + M K Y PD+ YN +I LC G+ + + ++ +ME W P A ++
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERK--WIKPTAASFG 221
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
++I + + + E ++ R+M G V TYN +I CK +
Sbjct: 222 LMIDGFYKE-----------EKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAE 270
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
A L + + PN VTY LI + + +D A+ + M N P S Y +I
Sbjct: 271 AKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMV-CNGYKPDSECYFTLI 329
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVP 383
H LC+ G A E ++ VP
Sbjct: 330 HCLCKGGDFETALILCRESMEKNWVP 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T A+ +I ++ E M ++ + YN +I LC+ A AK L+
Sbjct: 216 TAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALI 275
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ + P++ TY++LI +C + L EA LF +M+ G+ PD
Sbjct: 276 DG--VMSCRMRPNSVTYSLLIHGFC-----------SEENLDEAMNLFEVMVCNGYKPDS 322
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
Y LI CK + AL L + +K P+ L+ ++ +++D A E++
Sbjct: 323 ECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 231 PDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCC 290
P YT LI Y G L +A +FR M KG +P+V TYN++I G C
Sbjct: 722 PSVLHYTTLIDGYVVSG-----------ELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 770
Query: 291 KTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNH 345
+ A L ++M+ +GC PN V Y +L+ Y ++ A +V+++M + H
Sbjct: 771 MAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH 825
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
G P V+ Y LIDG + + +A E+F +M KG PN TY+S+IR E A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGN 381
+L++M+ P+ Y+ ++ L +AG+++EA + E+V G+
Sbjct: 779 CWLLKEMESRGCN-PNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH 825
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
AL MK+ G P+ + Y +LI Y + E+D+A E+ R+M + +P+ +Y +I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMT-VKGQLPNVFTYNSMI 766
Query: 358 HALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEVHERIKNGMR 417
LC AG EA L E+ G P Y + L AG+ + E +K G
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
Query: 418 KRYKQTMM 425
MM
Sbjct: 827 VHLVSKMM 834
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 26/246 (10%)
Query: 132 RANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYH 191
R + +T++ L ET HR + I+ T+ + + + G S ++Q
Sbjct: 60 RPHEAQTVFKTLAETG------HRPSLISYTTLLAAMTVQKQYGSISS---IVSEVEQSG 110
Query: 192 CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTG 251
+ D +N +I A GN A L +M+ G P TY LI Y G
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGL--NPTTSTYNTLIKGYGIAG---- 164
Query: 252 CRKATRRRLYEAGRLFRLMLFKGFV---PDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
K R + L LML +G V P++ T+N L+ CK +++ A E+ + M++
Sbjct: 165 --KPER-----SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRA-VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
G P+ VTY+++ Y E RA EV+ M P+ + ++ C GRV
Sbjct: 218 GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR 277
Query: 368 EAWSFL 373
+ F+
Sbjct: 278 DGLRFV 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Query: 168 IKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGF 227
++L+G Q + + LT MK+ + + D+ Y+T++ A G +A + ++M G
Sbjct: 330 VELVGNQKMKVQV-LTL--MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV 386
Query: 228 WCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALID 287
PDA Y+IL Y R + +A L ++ + P+VV + +I
Sbjct: 387 --KPDAHAYSILAKGYVRA-----------KEPKKAEELLETLIVESR-PNVVIFTTVIS 432
Query: 288 GCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI 347
G C + A+ +F M K G +PN T+++L+ Y + +A EVL+ M R
Sbjct: 433 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ-MMRGCGVK 491
Query: 348 PSSSSYTPIIHALCEAGRVA 367
P +S++ L EA RVA
Sbjct: 492 PENSTFL----LLAEAWRVA 507
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
D + +NA+I+ ++ ++ A++ MK+ G P TY++LI+ Y + +R+ E+L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 338 RDM-QRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKL 395
M + N + P+ ++ ++ A C+ +V EAW + ++ + G P TY +
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
Query: 396 CLAGEDGLLGDEVHERI 412
GE EV E++
Sbjct: 234 VQKGETVRAESEVVEKM 250
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 153 NHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNF 212
N + + IT +T+ + G +A+ F M + +PD AY+ L R
Sbjct: 350 NVKADVITYSTV---MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 406
Query: 213 ARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLF 272
+A+ LLE + + P+ +T +IS +C +G + +A R+F M
Sbjct: 407 KKAEELLETLIVES---RPNVVIFTTVISGWCSNG-----------SMDDAMRVFNKMCK 452
Query: 273 KGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI---RYYSATNE 329
G P++ T+ L+ G + + +A E+ + M+ G P T+ L R T+E
Sbjct: 453 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Query: 330 IDRAVEVLR-------DMQRLNHGIPSSSSY 353
++A+ L+ +++L S SS+
Sbjct: 513 SNKAINALKCKDIEIAKLEKLYQKQSSGSSF 543
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 26/246 (10%)
Query: 132 RANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYH 191
R + +T++ L ET HR + I+ T+ + + + G S ++Q
Sbjct: 60 RPHEAQTVFKTLAETG------HRPSLISYTTLLAAMTVQKQYGSISS---IVSEVEQSG 110
Query: 192 CRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTG 251
+ D +N +I A GN A L +M+ G P TY LI Y G
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGL--NPTTSTYNTLIKGYGIAG---- 164
Query: 252 CRKATRRRLYEAGRLFRLMLFKGFV---PDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
K R + L LML +G V P++ T+N L+ CK +++ A E+ + M++
Sbjct: 165 --KPER-----SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRA-VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
G P+ VTY+++ Y E RA EV+ M P+ + ++ C GRV
Sbjct: 218 GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR 277
Query: 368 EAWSFL 373
+ F+
Sbjct: 278 DGLRFV 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 16/238 (6%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYRMKQ---YHCRPDIRAYNTLIYALCRVGNFA 213
NP TT+T LIK G G +S M + P+IR +N L+ A C+
Sbjct: 147 NP-TTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Query: 214 RAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFK 273
A ++++ME G PD TY + + Y + G T R E+ + ++++ +
Sbjct: 206 EAWEVVKKMEECGV--RPDTVTYNTIATCYVQKG-------ETVR--AESEVVEKMVMKE 254
Query: 274 GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRA 333
P+ T ++ G C+ R++ L MK+ N V ++SLI + + D
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314
Query: 334 VEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLV 391
EVL M+ N +Y+ +++A AG + +A E+V G P + Y ++
Sbjct: 315 DEVLTLMKECNVK-ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 187 MKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
MK+ + + D+ Y+T++ A G +A + ++M G PDA Y+IL Y R
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV--KPDAHAYSILAKGYVRA 378
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMK 306
+ +A L ++ + P+VV + +I G C + A+ +F M
Sbjct: 379 -----------KEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMC 426
Query: 307 KKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
K G +PN T+++L+ Y + +A EVL+ M R P +S++ L EA RV
Sbjct: 427 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ-MMRGCGVKPENSTFL----LLAEAWRV 481
Query: 367 A 367
A
Sbjct: 482 A 482
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 50/250 (20%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T L+ +L E+G EA F + + RP + +Y TL+ A+ + ++ ++E
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G T L D + +NA
Sbjct: 109 SG----------TKL--------------------------------------DSIFFNA 120
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM-QRL 343
+I+ ++ ++ A++ MK+ G P TY++LI+ Y + +R+ E+L M +
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 344 NHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
N + P+ ++ ++ A C+ +V EAW + ++ + G P TY + GE
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETV 240
Query: 403 LLGDEVHERI 412
EV E++
Sbjct: 241 RAESEVVEKM 250
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 19/270 (7%)
Query: 129 VLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMK 188
+L+RA T+ + K H+ R NP T+ L+ E G + L ++ M
Sbjct: 181 ILLRAFCTEREMKEARSIFEKLHS--RFNP-DVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 189 QYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGI 248
+ +P+ Y I C+ NF A L E M+ F T+ I + HG
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDF-------DITVQILTTLIHG- 289
Query: 249 LTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
R +A +LF + +G PD YNAL+ K + A+++ ++M++K
Sbjct: 290 -----SGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 309 GCAPNRVTYDSLIRYYSATNE--IDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRV 366
G P+ VT+ S+ + E + E + M+ + +P + + ++ C G V
Sbjct: 345 GIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSL-VPKTPTIVMLMKLFCHNGEV 403
Query: 367 AEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+++ G P + L+ LC
Sbjct: 404 NLGLDLWKYMLEKGYCPHGHALELLTTALC 433
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Query: 176 LASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFT 235
L S+A F RM++ P+I N+L+ A + + +A + + GF DA T
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 236 YTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRI 295
+ + S C L A ++F + K DVV + ALI G
Sbjct: 460 GLVHVYSKCG-------------TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDG 506
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
AL++F +M + G PN +T+ S + S + ++ + + R M + S+ YT
Sbjct: 507 HNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
Query: 356 IIHALCEAGRVAEAWSFLVEL 376
I+ L AGR+ EA++ + +
Sbjct: 567 IVDLLGRAGRLDEAYNLITTI 587
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 15/222 (6%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T T L+ + + G A+ F +K Y RPD + Y +I G + L+++M
Sbjct: 421 TATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEM 480
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
+ + Y L+ +Y + G G + Y + Y
Sbjct: 481 QAKELKASEE--VYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFE----------AY 528
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
+ ++ K ++ +A F++M+K G P+ +L+R Y N +D+A+ +L +++
Sbjct: 529 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 588
Query: 343 LNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP 383
GI +YT ++ + G + EA LV++ G P
Sbjct: 589 --DGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 628
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 196 IRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKA 255
I Y+ LI+ + + + +L++M G + PD T T L+ Y + G +A
Sbjct: 384 ISDYSKLIHIHAKENHIEDVERILKKMSQNGIF--PDILTATALVHMYSKSGNFERATEA 441
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
F + G PD Y A+I G + + L ++M+ K +
Sbjct: 442 -----------FENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEE 490
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
Y +L+R Y+ + + A + MQ + G S +Y+ + A +AG+V +A S E
Sbjct: 491 VYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDE 550
Query: 376 LVDGGNVP 383
+ G+ P
Sbjct: 551 MRKLGHKP 558
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 105/279 (37%), Gaps = 66/279 (23%)
Query: 157 NPITTATITCLIKLLGEQGLASEASLTFYR-MKQYHCRPDIRAYNTLIYALCRVGNFARA 215
+ +T + +LG+ E FY +K+ R I N L+ + G+ A
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKE----FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
+ + + +E ++T +IS Y R G+L RK LF M K
Sbjct: 312 RRIFDNLE------KRTIVSWTTMISGYARCGLLDVSRK-----------LFDDMEEK-- 352
Query: 276 VPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTY------------------ 317
DVV +NA+I G + R Q AL LF++M+ P+ +T
Sbjct: 353 --DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 410
Query: 318 -----------------DSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHAL 360
SL+ Y+ I A+ V +Q N S +YT II L
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN-----SLTYTAIIGGL 465
Query: 361 CEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
G + A S+ E++D G P E T+ + C G
Sbjct: 466 ALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 31/228 (13%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
AT +I + G + L F +M + + RP+ +++ A ++G+ K
Sbjct: 487 ATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK----- 541
Query: 222 MELPGF----WCPPDAFTYTILISSYCRHGILTGCR---KATRRRLYEAGRLFRLMLFKG 274
+L GF + + F + L+ Y + G + T+ R
Sbjct: 542 -QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER--------------- 585
Query: 275 FVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAV 334
+ VTY +I G + +RA+ LF M++ G P+ +T+ +++ S + ID +
Sbjct: 586 ---NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 335 EVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNV 382
++ +M+ + + PSS Y I L GRV EA+ F+ L + GN+
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNI 690
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 181 SLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILI 240
SL Y KQ + P++ +YN +I A C GN A + + L P + TY L
Sbjct: 201 SLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHI-LANAPFAPSSVTYRHLT 259
Query: 241 SSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALE 300
+ G R+ +A L R ML KG D YN LI G +A+E
Sbjct: 260 KGLVQAG-----------RIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 308
Query: 301 LFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM--QRLNHGIPSSSSYTPIIH 358
F+++K K + + + + Y+ A+E R + ++ P+ + ++
Sbjct: 309 FFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNV---LLE 365
Query: 359 ALCEAGRVAEAWSFLVELVD 378
+ G+ EAW+ E++D
Sbjct: 366 VFLKFGKKDEAWALFNEMLD 385
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 260 LYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM-KKKGCAPNRVTYD 318
L A +L R +F P V T NA+I + R ++ LF+ K+ PN V+Y+
Sbjct: 161 LDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYN 220
Query: 319 SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVD 378
+I + +D A+EV R + PSS +Y + L +AGR+ +A S L E++
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLS 280
Query: 379 GGNVPREYTY 388
G Y
Sbjct: 281 KGQAADSTVY 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 191 HCRPDIRAYNTLIYALCRVGNFARA----KFLLEQMELPGFWCPPDAFTYTILISSYCRH 246
+ RP + N +I A+ R ++ + ++ +Q + P+ +Y +I+++C
Sbjct: 175 NTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIV-----PNVVSYNQIINAHCDE 229
Query: 247 GILTGCRKATRRRLYEAGRLFRLMLFKG-FVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
G + EA ++R +L F P VTY L G + RI A L +M
Sbjct: 230 G-----------NVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREM 278
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
KG A + Y++LIR Y + D+AVE +++
Sbjct: 279 LSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELK 314
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 143 LKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTL 202
L + K HN R+ + T ++ G EA F +M + C PD ++N L
Sbjct: 332 LFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE 262
+ LC A A+ L +ME PD +TY +L+ + + G ++ E
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKN--VKPDEYTYGLLMDTCFKEG-----------KIDE 438
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
++ M+ P++ YN L D K ++ A F DM + Y ++R
Sbjct: 439 GAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMR 497
Query: 323 YYSATNEIDRAVEVLRDM 340
S +D ++++ +M
Sbjct: 498 ALSEAGRLDEMLKIVDEM 515
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 31/239 (12%)
Query: 198 AYNTLIYALCRVGNFARAKFLLEQMEL---PGFWCPPDAFTYTILISSYCRHGILTGCRK 254
AYN ++ AL G F A L + ++ P + T+ ++++ YC G
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGG------- 364
Query: 255 ATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNR 314
+ EA +FR M PD +++N L++ C + A +L+ +M++K P+
Sbjct: 365 ----KFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDE 420
Query: 315 VTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLV 374
TY L+ +ID + M N P+ + Y + L +AG++ +A SF
Sbjct: 421 YTYGLLMDTCFKEGKIDEGAAYYKTMVESNLR-PNLAVYNRLQDQLIKAGKLDDAKSFFD 479
Query: 375 ELVDGGNVPREYTYRLVCDKLCLAGE--------DGLLGD-------EVHERIKNGMRK 418
+V + E Y+ + L AG D +L D E+ E +K +RK
Sbjct: 480 MMVSKLKMDDE-AYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRK 537
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 48/272 (17%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++KL+ E L EA+L +CRP I NT++ A R + ++L G
Sbjct: 102 ILKLIRENDL-EEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGAL------LQLHG 154
Query: 227 F----WCPPDAFTYTILISSYCR---------------------------HGILTGCRKA 255
F P+ TY ++ +Y ++ G
Sbjct: 155 FINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGL--V 212
Query: 256 TRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK--GCAPN 313
+ L +A + M KGFV D V Y+ L+ GC K L+L++++K+K G +
Sbjct: 213 SNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDD 272
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSF 372
V Y L++ Y A+E + N + S+ +Y ++ AL E G+ EA
Sbjct: 273 GVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKL 332
Query: 373 LVELVDGGNVPREY-----TYRLVCDKLCLAG 399
+ N PR T+ ++ + C G
Sbjct: 333 FDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGG 364
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 32/194 (16%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
RP + LI LC+VG A A+ L + LP D T+T +I+ Y + G +
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDG--LP----ERDVVTWTHVITGYIKLGDMREA 96
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVP-----------------DVVTYNALIDGCCKTYRI 295
R+ R + + G++ +VV++N +IDG ++ RI
Sbjct: 97 RELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRI 156
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
+ALELF++M ++ N V+++S+++ ID A+ + M R + S+T
Sbjct: 157 DKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRD-----VVSWTA 207
Query: 356 IIHALCEAGRVAEA 369
++ L + G+V EA
Sbjct: 208 MVDGLAKNGKVDEA 221
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T + +I + G +A F +M+ +PD Y ++I A+ + AK++
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
+ + F T L+ Y + G + R +F +M + V
Sbjct: 462 GVVMRSCL--DKNVFVTTALVDMYAKCGAIMIAR-----------LIFDMMSER----HV 504
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
T+NA+IDG + ALELFE+M+K PN VT+ S+I S + ++ ++
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFY- 563
Query: 340 MQRLNHGIP-SSSSYTPIIHALCEAGRVAEAWSFLVEL 376
M + N+ I S Y ++ L AGR+ EAW F++++
Sbjct: 564 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 54/237 (22%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRR 258
YN LI+ + R N +L +E+ G PD T+ L+ HG + ++
Sbjct: 912 YNMLIFYMFRAKNHLEVNKVL--LEMQGRGVLPDETTFNFLV-----HGYSSSADYSSSL 964
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKG--------- 309
R A M+ KG P+ + A+ C +++AL+L++ M+ KG
Sbjct: 965 RYLSA------MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQ 1018
Query: 310 ----------------------------CAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
APN YD++I+ S +D AV +L M
Sbjct: 1019 TKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTML 1075
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+ N IP SSSY +I+ L ++ +A F E+V+ G P T+ + K C A
Sbjct: 1076 K-NQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEA 1131
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 179 EASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTI 238
E L+F +Y PD+ N ++++LCR RA +E++E GF D T+ I
Sbjct: 308 EDLLSFIGEVKYE--PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGF--KQDEVTFGI 363
Query: 239 LISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRA 298
LI C G R LY ++ KG+ PDV +YNA++ G + Q
Sbjct: 364 LIGWCCYEG------DIKRAVLY-----LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHT 412
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG-IPSSSSYTPII 357
+ ++MK+ G + T+ ++ Y + + A ++ M +G I +S P+
Sbjct: 413 HCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKM--FGYGLIEASKVEDPLS 470
Query: 358 HALCEAG 364
A G
Sbjct: 471 EAFSLVG 477
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
+P+ R+ + +LC G+ +A L + ME G W + T ++ + G +
Sbjct: 976 KPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKG-WNLGSSVVQTKIVETLISKGEIPKA 1034
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
L R+ P+ Y+ +I + A+ L M K P
Sbjct: 1035 EDF----------LTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIP 1081
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
+YDS+I N++D+A++ +M L PS S+++ ++H CEA +V E+
Sbjct: 1082 GSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLS-PSISTWSGLVHKFCEACQVLESERL 1140
Query: 373 LVELVDGGNVPREYTYRLVCDKL 395
+ +V G P + ++ V D+
Sbjct: 1141 IKSMVGLGESPSQEMFKTVIDRF 1163
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG 247
K++ +P YN L+ A C ++ R K L+++M+ G P+ T++ LI G
Sbjct: 518 KRFCFKPTTATYNILLKA-CGT-DYYRGKELMDEMKSLGL--SPNQITWSTLIDMCGGSG 573
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
+ G A R+ R M G PDVV Y I C + ++ A LFE+M++
Sbjct: 574 DVEG-----------AVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRR 622
Query: 308 KGCAPNRVTYDSLIRY---YSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEA 363
PN VTY++L++ Y + E+ + + + +DM+ + P+ +I CE
Sbjct: 623 YQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYK-PNDHFLKELIEEWCEG 680
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 19/216 (8%)
Query: 193 RPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGC 252
RP ++ A+ + G + +E GF D F T L+ Y + G L
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN-- 274
Query: 253 RKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAP 312
A +F LM K +V T+ ++ G R L M + G P
Sbjct: 275 ---------NAFSVFELMKVK----NVFTWTSMATGLALNGRGNETPNLLNRMAESGIKP 321
Query: 313 NRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSF 372
N +T+ SL+ Y ++ +E+ + M+ P Y I+ L +AGR+ EA+ F
Sbjct: 322 NEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQF 381
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAGEDGLLGDEV 408
++ + P R +C+ + GE ++G+E+
Sbjct: 382 ILAMPIK---PDAILLRSLCNACSIYGET-VMGEEI 413
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 26/191 (13%)
Query: 184 FYRMKQYH-CRPDIRAYNTLIYALCRVGNFARAKF---LLEQMELPGFWCPPDAFTYTIL 239
FY M +PD +LI G + ++ L+ +++L G DAF + L
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKG-----DAFLSSAL 409
Query: 240 ISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP-DVVTYNALIDGCCKTYRIQRA 298
I YC+ GI+ R F M+FK DV + ++I G Q+A
Sbjct: 410 IDMYCKCGIIE--------------RAF--MVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Query: 299 LELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIH 358
L+LF M+++G PN VT +++ S + ++ + V M+ P + Y ++
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 359 ALCEAGRVAEA 369
LC AGRV EA
Sbjct: 514 LLCRAGRVEEA 524
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 199 YNTLIYALCRVGNFARAKFLLEQM--ELPGFWCPPDAFTYTILISSYCRHGILTGCRKAT 256
YN + +L F R L+E+M E+ D TY+ +I+ A
Sbjct: 189 YNVTMKSL----RFGRQFQLIEEMALEMVKDGVELDNITYSTIITC------------AK 232
Query: 257 RRRLY-EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
R LY +A F M G +PD VTY+A++D K+ +++ L L+E G P+ +
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVE 375
+ L + + + D VL++M+ ++ P+ Y ++ A+ AG+ A S E
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVK-PNVVVYNTLLEAMGRAGKPGLARSLFNE 351
Query: 376 LVDGGNVPREYT 387
+++ G P E T
Sbjct: 352 MLEAGLTPNEKT 363
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 13/219 (5%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T + ++ + + G E + R +PD A++ L G++ +++L++
Sbjct: 257 VTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE 316
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVT 281
M+ P+ Y L+ + R G R LF ML G P+ T
Sbjct: 317 MK--SMDVKPNVVVYNTLLEAMGRAGKPGLARS-----------LFNEMLEAGLTPNEKT 363
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
AL+ K + AL+L+E+MK K + + Y++L+ + + A + DM+
Sbjct: 364 LTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Query: 342 RLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGG 380
P + SYT +++ G+ +A E++ G
Sbjct: 424 ESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 9/243 (3%)
Query: 158 PITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKF 217
P T+T +I L +G A + K ++ Y +L++ N A+
Sbjct: 170 PQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARR 229
Query: 218 LLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVP 277
+++ M+ G PD F + L++ C + + + EA + M P
Sbjct: 230 VIQDMKSAGI--TPDLFCFNSLLTCLCERNV----NRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 278 DVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVL 337
++YN L+ +T R++ + ++ E MK+ GC P+ +Y ++R T + +++
Sbjct: 284 TSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIV 343
Query: 338 RDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLC 396
+M + G P Y +I LC RV A ++ Y L+ KLC
Sbjct: 344 DEM--IERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLC 401
Query: 397 LAG 399
G
Sbjct: 402 KGG 404
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 31/267 (11%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
++++L E+ + + +++ + D + ++ + L +VG A + + ++
Sbjct: 109 VLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD--K 166
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLM-----LFKGFVPDVVT 281
F CP D FT T +IS+ C G R +M + G ++
Sbjct: 167 FSCPQDGFTVTAIISALCSRG--------------HVKRALGVMHHHKDVISG--NELSV 210
Query: 282 YNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNE-------IDRAV 334
Y +L+ G ++ A + +DMK G P+ ++SL+ N + A+
Sbjct: 211 YRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEAL 270
Query: 335 EVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDK 394
++ +M+ P+S SY ++ L RV E+ L ++ G P +Y V
Sbjct: 271 NIMLEMRSYKIQ-PTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRV 329
Query: 395 LCLAGEDGLLGDEVHERIKNGMRKRYK 421
L L G G V E I+ G R K
Sbjct: 330 LYLTGRFGKGNQIVDEMIERGFRPERK 356
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 156 NNPITTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARA 215
N + T + + + L + G +A F + ++ C D +I ALC G+ RA
Sbjct: 133 NRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRA 192
Query: 216 KFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGF 275
++ + D + L S Y +L G + +R + EA R+ + M G
Sbjct: 193 LGVMHHHK--------DVISGNEL-SVY--RSLLFGW--SVQRNVKEARRVIQDMKSAGI 239
Query: 276 VPDVVTYNALIDGCCK-------TYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATN 328
PD+ +N+L+ C+ + + AL + +M+ P ++Y+ L+ T
Sbjct: 240 TPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTR 299
Query: 329 EIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVP-REYT 387
+ + ++L M+R + P + SY ++ L GR + + E+++ G P R++
Sbjct: 300 RVRESCQILEQMKR-SGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFY 358
Query: 388 YRLV 391
Y L+
Sbjct: 359 YDLI 362
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
T LI + + G A + F M +I A+N+L+ L A+ L+ +ME
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACLLKDAEALMIRMEK 319
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
G PDA T+ L S Y AT + +A + M KG P+VV++ A
Sbjct: 320 EGI--KPDAITWNSLASGY-----------ATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEV 336
+ GC K + AL++F M+++G PN T +L++ + + EV
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 23/219 (10%)
Query: 162 ATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ 221
T L+ +GL+ +A RM+ +P + ++L+ A+ G+ K +
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY 250
Query: 222 MELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRR--------------------LY 261
+ W D + T LI Y + G L R L
Sbjct: 251 ILRNQLW--YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 262 EAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLI 321
+A L M +G PD +T+N+L G + ++AL++ MK+KG APN V++ ++
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 322 RYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHAL 360
S A++V MQ G P++++ + ++ L
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVG-PNAATMSTLLKIL 406
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 32/249 (12%)
Query: 132 RANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMKQYH 191
RAN + T+ E K HN + ++ EQ + +A + F RM +
Sbjct: 546 RANVSGTM-----EELEKMHNKRLQEMCVSWNSIISGYVMKEQ--SEDAQMLFTRMMEMG 598
Query: 192 CRPDIRAYNTLIYALCRVGNFARAKFLLEQM---ELPGFWCPPDAFTYTILISSYCRHGI 248
PD Y T++ + + K + Q+ EL D + + L+ Y + G
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQ-----SDVYICSTLVDMYSKCGD 653
Query: 249 LTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKK 308
L R LM K D VT+NA+I G + + A++LFE M +
Sbjct: 654 LHDSR---------------LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Query: 309 GCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVA 367
PN VT+ S++R + ID+ +E M+R ++G+ P Y+ ++ L ++G+V
Sbjct: 699 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR-DYGLDPQLPHYSNMVDILGKSGKVK 757
Query: 368 EAWSFLVEL 376
A + E+
Sbjct: 758 RALELIREM 766
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 51/209 (24%)
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG 247
+ CRP +R Y+ L AL GN +S+ H
Sbjct: 172 RNLECRPTMRTYHILFKALLGRGN-----------------------------NSFINHL 202
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
+ R LFR M+ G PDV N L+ G R EL +MK
Sbjct: 203 YMETVRS-----------LFRQMVDSGIEPDVFALNCLVKG-----RTINTRELLSEMKG 246
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
KG PN +Y+SL+ ++ + EID AV+ L +M N + SY ++ C G+
Sbjct: 247 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE-NGRVVDFISYRTLVDESCRKGKYD 305
Query: 368 EAWSFL-----VELVDGGNVPREYTYRLV 391
EA L +LVD + + Y++V
Sbjct: 306 EATRLLEMLREKQLVDIDSDDKLKMYQMV 334
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 51/209 (24%)
Query: 188 KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHG 247
+ CRP +R Y+ L AL GN +S+ H
Sbjct: 197 RNLECRPTMRTYHILFKALLGRGN-----------------------------NSFINHL 227
Query: 248 ILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKK 307
+ R LFR M+ G PDV N L+ G R EL +MK
Sbjct: 228 YMETVRS-----------LFRQMVDSGIEPDVFALNCLVKG-----RTINTRELLSEMKG 271
Query: 308 KGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVA 367
KG PN +Y+SL+ ++ + EID AV+ L +M N + SY ++ C G+
Sbjct: 272 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE-NGRVVDFISYRTLVDESCRKGKYD 330
Query: 368 EAWSFL-----VELVDGGNVPREYTYRLV 391
EA L +LVD + + Y++V
Sbjct: 331 EATRLLEMLREKQLVDIDSDDKLKMYQMV 359
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 29/258 (11%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
+T LI++ G +A F M D+ +N L+ +VG A+ LLE M
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
W + ++T +IS Y + G R EA +F+ ML + PD VT
Sbjct: 209 PC---WVRNEV-SWTCVISGYAKSG-----------RASEAIEVFQRMLMENVEPDEVTL 253
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQR 342
A++ C ++ + + +G +++I Y+ + I +A++V +
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE 313
Query: 343 LNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGEDG 402
N ++T II L G AEA + +V G P + T+ + G
Sbjct: 314 RN-----VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG--- 365
Query: 403 LLGDEVHERIKNGMRKRY 420
++ +R+ N MR +Y
Sbjct: 366 --WVDLGKRLFNSMRSKY 381
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 25/259 (9%)
Query: 118 HDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITTATITCLIKLLGEQGLA 177
HD+V+ M + A +G ++ +K T T +I L + L
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD----------GVTWTVMISGLVQNELF 447
Query: 178 SEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYT 237
+EA+ M + +P Y+ L+ + N + K + + PD
Sbjct: 448 AEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 238 ILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQR 297
L+S Y + G + +A +F M+ K D V++N++I G +
Sbjct: 508 SLVSMYAKCGAIE-----------DAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADK 552
Query: 298 ALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPII 357
AL LF++M G PN VT+ ++ S + I R +E+ + M+ P Y +I
Sbjct: 553 ALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMI 612
Query: 358 HALCEAGRVAEAWSFLVEL 376
L AG++ EA F+ L
Sbjct: 613 DLLGRAGKLKEAEEFISAL 631
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 28/252 (11%)
Query: 166 CLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELP 225
CL+ + + G+ EA+ F M D+ ++N ++ ++G F A L E+M+
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSV----KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
D T++ IS Y + G+ YEA + R ML G P+ VT ++
Sbjct: 325 KI--KMDVVTWSAAISGYAQRGLG-----------YEALGVCRQMLSSGIKPNEVTLISV 371
Query: 286 IDGCCKTYRIQRALELF-------EDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLR 338
+ GC + E+ D++K G + + LI Y+ ++D A +
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 339 DMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLA 398
+ + ++T +I + G +A L E+ + R + + C + A
Sbjct: 432 SLSPKERDV---VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 399 GEDGL-LGDEVH 409
L +G ++H
Sbjct: 489 SLAALRIGKQIH 500
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 182 LTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILIS 241
+ MK++ C+PD+ YN+++ L R G +L M+ + + ++ I
Sbjct: 198 MILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMK--------EDCSVSVNII 249
Query: 242 SYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALEL 301
+Y + +L G RKA R + ++ M+ G PD+++Y A+ID ++ ++ +L L
Sbjct: 250 TY--NTVLNGMRKACRFDMCLV--IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRL 305
Query: 302 FEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQ 341
F++MK++ P+ Y +LI + + A+++ +++
Sbjct: 306 FDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 234 FTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTY 293
F LI+ Y R G + EA R+FR+M K DV++YN +I G
Sbjct: 291 FVGNALINMYSRCGDIN-----------EARRVFRVMRDK----DVISYNTMISGLAMHG 335
Query: 294 RIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSY 353
A+ F DM +G PN+VT +L+ S +D +EV M+R+ + P Y
Sbjct: 336 ASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY 395
Query: 354 TPIIHALCEAGRVAEAWSFLVELVDGGNVPRE 385
I+ L GR+ EA+ F+ N+P E
Sbjct: 396 GCIVDLLGRVGRLEEAYRFI------ENIPIE 421
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 37/252 (14%)
Query: 149 KHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMK-QYHCRPDIRAYNTLIYALC 207
+ + +++N I T L +LG+ EA F+ M Q PD+ AY ++ L
Sbjct: 496 QRQDRYKSNKIRIIYTTAL-NVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLG 554
Query: 208 RVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLF 267
+ G+ ++++ M P P F T L R
Sbjct: 555 QAGHIKELFYVIDTMRSP----PKKKFKPTTLEKWDPR---------------------- 588
Query: 268 RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
PDVV YNA+++ C + + + A + + +K++G P+ VTY ++ A
Sbjct: 589 -------LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLAC 641
Query: 328 NEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
+ + E R MQ+ IP++ +Y +++ L + G+ EA + ++ G V
Sbjct: 642 EKYNLVHEFFRKMQK--SSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAAL 699
Query: 388 YRLVCDKLCLAG 399
Y + LC AG
Sbjct: 700 YYDLARCLCSAG 711
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 160 TTATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T TCL + GL EA L F RM+ RPD A+ T+I R+G A+ L
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILT-----------GCRKATRRRL-------- 260
+M PD + ++IS + + G T K+TR L
Sbjct: 285 GEMS------SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 261 ----YEAGRLFRLMLFK-GFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRV 315
+ G + K G ++ ++L+ K +++ A ++FE +++K N V
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----NDV 394
Query: 316 TYDSLIRYYSATNEIDRAVEVLRDMQRLNHGI 347
++++IR Y+ E + +E+ DM+ + I
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 37/252 (14%)
Query: 149 KHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRMK-QYHCRPDIRAYNTLIYALC 207
+ + +++N I T L +LG+ EA F+ M Q PD+ AY ++ L
Sbjct: 496 QRQDRYKSNKIRIIYTTAL-NVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLG 554
Query: 208 RVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLF 267
+ G+ ++++ M P P F T L R
Sbjct: 555 QAGHIKELFYVIDTMRSP----PKKKFKPTTLEKWDPR---------------------- 588
Query: 268 RLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSAT 327
PDVV YNA+++ C + + + A + + +K++G P+ VTY ++ A
Sbjct: 589 -------LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLAC 641
Query: 328 NEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYT 387
+ + E R MQ+ IP++ +Y +++ L + G+ EA + ++ G V
Sbjct: 642 EKYNLVHEFFRKMQK--SSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAAL 699
Query: 388 YRLVCDKLCLAG 399
Y + LC AG
Sbjct: 700 YYDLARCLCSAG 711
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 14/170 (8%)
Query: 184 FYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSY 243
F+R Q P+ AY L+ L + G A +E ME G A Y L
Sbjct: 650 FFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGI--VGSAALYYDLARCL 707
Query: 244 CRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFE 303
C G R E + + + P VVTY LI C + I+ A +F+
Sbjct: 708 CSAG-----------RCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFD 756
Query: 304 DMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSY 353
M KK C+PN VT + +++ Y + A E+ + M + I +SS +
Sbjct: 757 QM-KKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDF 805
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 194 PDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCR 253
PD+ YN ++ A + + A ++L+Q++ G P TY +++ ++ C
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRG--QKPSPVTYGLIME------VMLACE 642
Query: 254 KATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPN 313
K Y F + K +P+ + Y L++ K + A+ EDM+ +G +
Sbjct: 643 K------YNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGS 696
Query: 314 RVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEA 369
Y L R + + + +L+ + R+ + P +YT +I A ++G + A
Sbjct: 697 AALYYDLARCLCSAGRCNEGLNMLKKICRVANK-PLVVTYTGLIQACVDSGNIKNA 751
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 58/306 (18%)
Query: 163 TITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQM 222
T LIK E T ++ ++ + D+ N+L++ G A A + QM
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 223 ELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTY 282
GF D ++T +++ YC+ G++ R+ +F M + ++ T+
Sbjct: 179 ---GF---RDVVSWTSMVAGYCKCGMVENARE-----------MFDEMPHR----NLFTW 217
Query: 283 NALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR---YYSATNEIDRAVEVL-- 337
+ +I+G K ++A++LFE MK++G N S+I + A +RA E +
Sbjct: 218 SIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVK 277
Query: 338 --------------------RDMQRLNH---GIP--SSSSYTPIIHALCEAGRVAEAWSF 372
D+++ H G+P S S++ II L G +A +
Sbjct: 278 SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHY 337
Query: 373 LVELVDGGNVPREYTYRLVCDKLCLAG--EDGLLGDEVHERIK--NGMRKRYKQTMMVKP 428
+++ G +PR+ T+ V G E GL E++E +K +G+ R + +
Sbjct: 338 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL---EIYENMKKDHGIEPRLEHYGCIVD 394
Query: 429 VMTRKG 434
++ R G
Sbjct: 395 MLGRAG 400
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 165 TCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMEL 224
+ L+ L GL +A L F ++ R D+ ++N LI R +A L + M
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALES---RNDV-SWNALIAGHARRSGTEKALELFQGMLR 255
Query: 225 PGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNA 284
GF P F+Y L + G L K + ++G +L+ F G N
Sbjct: 256 DGF--RPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGE--KLVAFAG--------NT 302
Query: 285 LIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLN 344
L+D K+ I A ++F+ + K+ + V+++SL+ Y+ AV +M+R+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV- 357
Query: 345 HGI-PSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAGE 400
GI P+ S+ ++ A +G + E W + + G VP + Y V D L AG+
Sbjct: 358 -GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 57/257 (22%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I GL ++A +++M + PD+ + L+ A + NF FL + + G
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C + F + LI +Y +G ++ +LF +L K D V +N ++
Sbjct: 169 MDC--NEFVASSLIKAYLEYG-----------KIDVPSKLFDRVLQK----DCVIWNVML 211
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYD---------------------------- 318
+G K + ++ F M+ +PN VT+D
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 319 -------SLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWS 371
SL+ YS D A ++ R M R + + ++ +I ++G + E+ +
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD-----TVTWNCMISGYVQSGLMEESLT 326
Query: 372 FLVELVDGGNVPREYTY 388
F E++ G +P T+
Sbjct: 327 FFYEMISSGVLPDAITF 343
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
+I L E G E F MK+ P A++ I + +G + + Q+ G
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
F A LI+ Y + G++ EA ++FR M D V++NALI
Sbjct: 448 FDSSLSA--GNALITMYAKCGVVE-----------EARQVFRTMP----CLDSVSWNALI 490
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
+ A++++E+M KKG P+R+T +++ S +D+ + M+ +
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550
Query: 347 IPSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
P + Y +I LC +G+ ++A S + L
Sbjct: 551 PPGADHYARLIDLLCRSGKFSDAESVIESL 580
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 259 RLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYD 318
R +EA LF + K +PDVV + A+++ + + L++F M G +PN TY
Sbjct: 212 RTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYS 271
Query: 319 SLIRYYSATNEIDR-AVEVLRDMQRLNHGI-PSSSSYTPIIHALCEAGRVAEAWSFLVEL 376
LI+ +A + + A + L +M + +G+ P++++YT + A G+ A L E+
Sbjct: 272 VLIKGLAADGKTHKDAKKYLLEM--MGNGMSPNAATYTAVFEAFVREGKEESARELLQEM 329
Query: 377 VDGGNVPREYTYR 389
G VP E R
Sbjct: 330 KGKGFVPDEKAVR 342
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQ-MELP 225
+ L + G EA F ++K + PD+ A+ ++ A G +AK L+ M +
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAG---QAKETLKVFMRML 259
Query: 226 GFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNAL 285
P+A+TY++LI G K ++ L E M+ G P+ TY A+
Sbjct: 260 ASGVSPNAYTYSVLIKGLAADG---KTHKDAKKYLLE-------MMGNGMSPNAATYTAV 309
Query: 286 IDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRY 323
+ + + + A EL ++MK KG P+ + Y
Sbjct: 310 FEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEY 347
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
LI LG+ G + +K +PD +N L+ AL + + L + +
Sbjct: 325 LINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSEN 384
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
C + T ++S C+ G + + LYE M G +YN +I
Sbjct: 385 LCCLNEYLYNTAMVS--CQK---LGYWEKAVKLLYE-------MEGSGLTVSTSSYNLVI 432
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
C K+ + + AL ++E M ++ C PN TY SL+R + D ++L+ ++
Sbjct: 433 SACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVE----- 487
Query: 347 IPSSSSYTPIIHALC 361
P S Y IH +C
Sbjct: 488 -PDVSLYNAAIHGMC 501
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 42/318 (13%)
Query: 91 RDPHRVDLGLRKSLEFFRWVEAHSGFTHDEVTCRE-MACVLVRANATK--TLWGFLKETA 147
R R+D +R +LE F + G + C ++C+L + K T++ F+++
Sbjct: 115 RKLSRLD-KVRSALELFDSMR-FLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE 172
Query: 148 NKHHNNHRNNPITTATITCLIKLLGEQGLASEASLTFYRM-----KQYHCRPDIRAYNTL 202
N +T T + ++K + E E++L +R K+ C D+ YNT
Sbjct: 173 N----------VTGHTYSLMLKAVAEVK-GCESALRMFRELEREPKRRSC-FDVVLYNTA 220
Query: 203 IYALCRVGNFARAKFLLEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYE 262
I R+ N + + M+ G TY++L+S + R G R +Y+
Sbjct: 221 ISLCGRINNVYETERIWRVMKGDGH--IGTEITYSLLVSIFVRCG-----RSELALDVYD 273
Query: 263 AGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
++ K + + Y A+I C K + AL++F+ M KKG PN V ++LI
Sbjct: 274 -----EMVNNKISLREDAMY-AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLIN 327
Query: 323 YYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNV 382
++ +V ++ L H P ++ ++ AL +A R + L +++ N+
Sbjct: 328 SLGKAGKVGLVFKVYSVLKSLGHK-PDEYTWNALLTALYKANRYEDVLQ-LFDMIRSENL 385
Query: 383 --PREYTYR---LVCDKL 395
EY Y + C KL
Sbjct: 386 CCLNEYLYNTAMVSCQKL 403
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLE 220
T T LIK+ E L M+ HCR DI A+N +I A V + RA L
Sbjct: 302 TEVATALIKVYSEM-LEDYTDCYKLFMEMSHCR-DIVAWNGIITAFA-VYDPERAIHLFG 358
Query: 221 QMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVV 280
Q+ PD +T++ +L C R A + ++ GF+ D V
Sbjct: 359 QLRQEKL--SPDWYTFS---------SVLKACAGLVTAR--HALSIHAQVIKGGFLADTV 405
Query: 281 TYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDM 340
N+LI K + + +F+DM + + V+++S+++ YS ++D + V + M
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSR----DVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 341 QRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDG-GNVPREYTYRLVCDKL 395
+N P S+++ ++ A AGRV E + + +P+ Y V D L
Sbjct: 462 D-IN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDML 513
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 29/224 (12%)
Query: 106 FFRWVEAHSGFTHDEVTCREMACVLVRANATKTLWGFLKETANKHHNNHRNNPITT--AT 163
FF WV GFTHD T M +L R E +K + R I +T
Sbjct: 397 FFCWVAIQPGFTHDAYTIERMMAMLARNGQV--------ELVDKLISKVRIEGIKLPFST 448
Query: 164 ITCLIKLLGEQGLASEASLTFYRMKQYHCRPD-----IRAYNTLIYALCRVGNFARAKFL 218
I +I L G EA++ + + C + Y++L+ L + A A
Sbjct: 449 IRLIIDLYGISK-KPEAAIKVFNEDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALET 507
Query: 219 LEQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPD 278
LE M L G PD T++ L+ + G + RLF ++ G PD
Sbjct: 508 LEDMMLTG--VSPDIQTFSGLMYHFALQG-----------EIQTVERLFSMVRQIGLEPD 554
Query: 279 VVTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIR 322
L+ C+ R A +F+DMK P+R T + L++
Sbjct: 555 PYMLKLLVQAYCRCERSVLAYRVFQDMKDSNLMPDRETKELLVK 598
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 16/224 (7%)
Query: 179 EASLTFYRM--KQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPGFWCPPDAFTY 236
E+++ + + +Q +P++ Y LI L + +A L ++M G C + Y
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEG--CVVNHEVY 188
Query: 237 TILISSYCRHGILTGCRKATRRRLYEAGRLF-RLMLFKGFVPDVVTYNALIDGCCKTYRI 295
T L+S+Y R G R A L R+ PDV TY+ LI + +
Sbjct: 189 TALVSAYSRSG-----------RFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAF 237
Query: 296 QRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTP 355
+ +L DM+++G PN +TY++LI Y L M + P S +
Sbjct: 238 DKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNS 297
Query: 356 IIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
+ A G++ + + G P T+ ++ D +G
Sbjct: 298 TLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSG 341
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 246 HGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALIDGCCKTYRIQRALELFEDM 305
H +T R + +++E L R L+ + P+V Y LI K + ++A ELF++M
Sbjct: 122 HERITALRWESAIQVFE---LLREQLW--YKPNVGIYVKLIVMLGKCKQPEKAHELFQEM 176
Query: 306 KKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHGIPSSSSYTPIIHALCEAGR 365
+GC N Y +L+ YS + D A +L M+ ++ P +Y+ +I + +
Sbjct: 177 INEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFA 236
Query: 366 VAEAWSFLVELVDGGNVPREYTYRLVCD 393
+ L ++ G P TY + D
Sbjct: 237 FDKVQDLLSDMRRQGIRPNTITYNTLID 264
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 15/240 (6%)
Query: 161 TATITCLIKLLGEQGLASEASLTFYRM-KQYHCRPDIRAYNTLIYALCRVGNFARAKFLL 219
T T LI G+ + E T +M + C+PD N+ + A G +
Sbjct: 256 TITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCY 315
Query: 220 EQMELPGFWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDV 279
E+ + G P+ T+ IL+ SY + G + + M + +
Sbjct: 316 EKFQSSGI--EPNIRTFNILLDSYGKSG-----------NYKKMSAVMEYMQKYHYSWTI 362
Query: 280 VTYNALIDGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRD 339
VTYN +ID + +++ LF M+ + P+ VT SL+R Y ++ D+ VLR
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 340 MQRLNHGIPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNVPREYTYRLVCDKLCLAG 399
++ + + + ++ A + AE L + G P + TYR + ++G
Sbjct: 423 IENSDIRL-DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 22/235 (9%)
Query: 167 LIKLLGEQGLASEASLTFYRMKQYHCRPDIRAYNTLIYALCRVGNFARAKFLLEQMELPG 226
L+ L G + A F +M + D+ A+N++I G A L +M G
Sbjct: 29 LLHLYANCGDVASAYKVFDKMPE----KDLVAWNSVINGFAENGKPEEALALYTEMNSKG 84
Query: 227 FWCPPDAFTYTILISSYCRHGILTGCRKATRRRLYEAGRLFRLMLFKGFVPDVVTYNALI 286
PD FT L+S+ + G LT + R+ M+ G ++ + N L+
Sbjct: 85 I--KPDGFTIVSLLSACAKIGALTLGK-----------RVHVYMIKVGLTRNLHSSNVLL 131
Query: 287 DGCCKTYRIQRALELFEDMKKKGCAPNRVTYDSLIRYYSATNEIDRAVEVLRDMQRLNHG 346
D + R++ A LF++M K N V++ SLI + A+E+ + M+
Sbjct: 132 DLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 347 IPSSSSYTPIIHALCEAGRVAEAWSFLVELVDGGNV-PREYTYRLVCDKLCLAGE 400
+P ++ I++A G V E + + + + + PR + + D L AG+
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242