Miyakogusa Predicted Gene
- Lj0g3v0034169.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0034169.1 tr|G7JGD6|G7JGD6_MEDTR Transcription factor
bHLH19 OS=Medicago truncatula GN=MTR_4g097940 PE=4
SV=1,57.58,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; CIRCADIAN PROTEIN
CLOCK/ARNT/BMAL/PAS,NULL; HLH,Helix-loop-helix,CUFF.1500.1
(349 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 178 4e-45
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 171 6e-43
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 158 5e-39
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 154 7e-38
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 150 1e-36
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 83 3e-16
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 82 5e-16
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 80 2e-15
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 79 4e-15
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 2e-12
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 4e-12
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 1e-11
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 67 1e-11
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 67 1e-11
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 67 1e-11
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 67 1e-11
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 67 2e-11
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 4e-11
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 4e-11
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 6e-11
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 65 6e-11
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 1e-10
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 64 2e-10
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 64 2e-10
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 63 3e-10
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 60 2e-09
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 60 2e-09
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 60 2e-09
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 57 2e-08
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 57 2e-08
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 57 2e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 57 2e-08
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 57 2e-08
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 56 5e-08
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 55 9e-08
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 54 1e-07
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 54 1e-07
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 1e-07
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 3e-07
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 53 4e-07
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 52 5e-07
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 52 6e-07
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 7e-07
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 51 1e-06
AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic helix-loo... 51 1e-06
AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-12896... 51 1e-06
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 51 1e-06
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 51 1e-06
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 51 1e-06
AT4G14410.2 | Symbols: bHLH104 | basic helix-loop-helix (bHLH) D... 50 2e-06
AT4G14410.1 | Symbols: bHLH104 | basic helix-loop-helix (bHLH) D... 50 2e-06
AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT1G49770.1 | Symbols: RGE1, ZOU | basic helix-loop-helix (bHLH)... 49 5e-06
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 160/234 (68%), Gaps = 16/234 (6%)
Query: 127 VKPKMESGFGENL---DFAA-VISQGAYD----DKSFLYNENKLAATATIRNQVQARDHV 178
VKP M+ + L DF++ VIS A + DK + + R+ V A++HV
Sbjct: 62 VKPMMKINNKQQLISFDFSSNVISSPAAEEIIMDKLVGRGTKRKTCSHGTRSPVLAKEHV 121
Query: 179 LAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL-EEQVADKTV 237
LAERKRREKLS++FIALSA+LPGLKK DK T+L+DAIS +KQL+EQ++TL EE+ A + +
Sbjct: 122 LAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM 181
Query: 238 ETAIFLKRSVVFGDDDGSFSDENS-----DQSLPEIEARVSGKDILIRIHCEKHHGKAVS 292
E+ I +K+S VF D++ + S S DQ+LPEIEA++S DILIRI CEK G ++
Sbjct: 182 ESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCMIN 241
Query: 293 AILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTT-KELIKSLSQSL 345
IL +E L ++++ +LPFG++TLDIT++ QM K+++++ K+L+++L ++
Sbjct: 242 -ILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVRNLRLAM 294
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 135/182 (74%), Gaps = 7/182 (3%)
Query: 169 RNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
RNQ A+DH++AERKRREKL+QRF+ALSA++PGLKKMDKA+VL DA+ ++K L+E+V L
Sbjct: 145 RNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEL 204
Query: 229 EEQVADKTVETAIFLKRS-VVFGDDDGSFS----DENSDQSLPEIEARVSGKDILIRIHC 283
EEQ ++ +E+ + +K+S ++ D++ SFS D SD LPEIE R S +D+LI+I C
Sbjct: 205 EEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILC 264
Query: 284 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKELIKSLSQ 343
EK G ++ I+ E+EK H+ + ++S+L FG TLDITI+ + + ++++T +++KSL
Sbjct: 265 EKQKGH-LAKIMAEIEKLHILITNSSVLNFG-PTLDITIIAKKESDFDMTLMDVVKSLRS 322
Query: 344 SL 345
+L
Sbjct: 323 AL 324
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 129/189 (68%), Gaps = 19/189 (10%)
Query: 175 RDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQ--V 232
++HVLAERKRR+KL++R IALSA+LPGLKK DKATVLEDAI +LKQL+E+VK LEE+ V
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190
Query: 233 ADKTVETAIFLKRSVVF--------------GDDDGSFSDENS--DQSLPEIEARVSGKD 276
K ++ I +KRS V+ S SDE S Q++P IEARVS +D
Sbjct: 191 TKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRD 250
Query: 277 ILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKE 336
+LIR+HCEK+ G + IL LEK L V ++ LPFGN+TL ITI+T+M +++ +E
Sbjct: 251 LLIRVHCEKNKGCMIK-ILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNKFSRPVEE 309
Query: 337 LIKSLSQSL 345
++K++ +L
Sbjct: 310 VVKNIRVAL 318
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 133/190 (70%), Gaps = 10/190 (5%)
Query: 164 ATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKE 223
A + R+Q A+DH+LAERKRREKL+QRF+ALSA++PGLKKMDKA+VL DAI ++K L+E
Sbjct: 114 AQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQE 173
Query: 224 QVKTLEEQVADKTVETAIFLKRSVVFGDDD--------GSFSDENSDQSLPEIEARVSGK 275
VK EEQ +KT+E+ + +K+S + D++ + +S +LPEIE RVSGK
Sbjct: 174 SVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGK 233
Query: 276 DILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTK 335
D+LI+I CEK G + I+ E+EK L++ ++++LPFG T DI+I+ Q +++ +
Sbjct: 234 DVLIKILCEKQKGNVIK-IMGEIEKLGLSITNSNVLPFG-PTFDISIIAQKNNNFDMKIE 291
Query: 336 ELIKSLSQSL 345
+++K+LS L
Sbjct: 292 DVVKNLSFGL 301
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 133/190 (70%), Gaps = 11/190 (5%)
Query: 164 ATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKE 223
A + R+Q A+DH+LAERKRREKL+QRF+ALSA++PGLKKMDKA+VL DAI ++K L+E
Sbjct: 114 AQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQE 173
Query: 224 QVKTLEEQVADKTVETAIFLKRSVVFGDDD--------GSFSDENSDQSLPEIEARVSGK 275
VK EEQ +KT+E+ + +K+S + D++ + +S +LPEIE RVSGK
Sbjct: 174 SVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGK 233
Query: 276 DILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTK 335
D+LI+I CEK G + I+ E+EK L++ ++++LPFG T DI+I+ Q +++ +
Sbjct: 234 DVLIKILCEKQKGNVIK-IMGEIEKLGLSITNSNVLPFG-PTFDISIIAQ-NNNFDMKIE 290
Query: 336 ELIKSLSQSL 345
+++K+LS L
Sbjct: 291 DVVKNLSFGL 300
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 86/139 (61%), Gaps = 10/139 (7%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQ-VKTLEE--QV 232
+HV AER+RREKL+QRF AL AV+P + KMDKA++L DAI+Y+ +LK + VKT E Q+
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQI 511
Query: 233 ADKTVETAIFL--KRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCEKHH--- 287
++ E + L +++ G D S + EIE ++ G D +IR+ K +
Sbjct: 512 KNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGM-EIEVKIIGWDAMIRVESSKRNHPA 570
Query: 288 GKAVSAIL-VELEKHHLTV 305
+ +SA++ +ELE +H ++
Sbjct: 571 ARLMSALMDLELEVNHASM 589
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 235
+HV AER+RREKL+QRF +L AV+P + KMDKA++L DAISY+ +LK +++ E +
Sbjct: 416 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEEL 475
Query: 236 TVETAIFLKRSVVFGDDDGSFSDE---NSDQSL---PEIEARVSGKDILIRIHCEK--HH 287
+ + K + G+ S D N + S+ E++ ++ G D +IRI C K H
Sbjct: 476 QKQIDVMNKEA---GNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHP 532
Query: 288 GKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKELIKSLSQSLKQ 347
G L EL+ L V S L N+ + +M ++ T +L +L++ + +
Sbjct: 533 GAKFMEALKELD---LEVNHAS-LSVVNDLMIQQATVKMGNQF-FTQDQLKVALTEKVGE 587
Query: 348 C 348
C
Sbjct: 588 C 588
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 31/182 (17%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLK---EQVKTLEEQV 232
+HV AER+RREKL+QRF +L AV+P + KMDKA++L DAISY+ +LK +Q ++ +E++
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEI 474
Query: 233 ADKTVETAIFLKRSVVFGDDDGSFSDE----NSDQSLP----EIEARVSGKDILIRIHCE 284
K + + G GS + E N D + EI+ ++ G D++IR+ C
Sbjct: 475 QKKL----DGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCG 530
Query: 285 K--HHGKAVSAIL--VELEKHH--------LTVQSTSILP----FGNNTLDITIVTQMKK 328
K H G L ++LE +H L +Q ++ F ++ L + ++T++ +
Sbjct: 531 KKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFNHDQLKVALMTKVGE 590
Query: 329 EY 330
Y
Sbjct: 591 NY 592
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 70/108 (64%), Gaps = 19/108 (17%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 235
+HV AER+RREKL+QRF AL +V+P + KMDKA++L DAISY+K+L+E+VK +E D+
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIME----DE 450
Query: 236 TVETAIFLKRSVVFGDDDGSFSDENSD--QSLPEIEARVSGKDILIRI 281
V T D S S+ N+ + PE++ + +++++R+
Sbjct: 451 RVGT-------------DKSLSESNTITVEESPEVDIQAMNEEVVVRV 485
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 28/175 (16%)
Query: 171 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 230
+ +A +HV AER+RREKL+QRF AL +V+P + KMDKA++L DA+SY+ +L ++K +E
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 231 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHC--EKHHG 288
+ E + + D D I + SG+D+ +RI+C E H
Sbjct: 488 E-----RERLGYSSNPPISLDSD--------------INVQTSGEDVTVRINCPLESH-- 526
Query: 289 KAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKELIKSLSQ 343
S I E+ + V ++++ + D + T + K LT ++LI +LS+
Sbjct: 527 -PASRIFHAFEESKVEVINSNL----EVSQDTVLHTFVVKSEELTKEKLISALSR 576
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 28/175 (16%)
Query: 171 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 230
+ +A +HV AER+RREKL+QRF AL +V+P + KMDKA++L DA+SY+ +L ++K +E
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 231 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHC--EKHHG 288
+ E + + D D I + SG+D+ +RI+C E H
Sbjct: 488 E-----RERLGYSSNPPISLDSD--------------INVQTSGEDVTVRINCPLESH-- 526
Query: 289 KAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKELIKSLSQ 343
S I E+ + V ++++ + D + T + K LT ++LI +LS+
Sbjct: 527 -PASRIFHAFEESKVEVINSNL----EVSQDTVLHTFVVKSEELTKEKLISALSR 576
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 28/175 (16%)
Query: 171 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 230
+ +A +HV AER+RREKL+QRF AL +V+P + KMDKA++L DA+SY+ +L ++K +E
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 231 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHC--EKHHG 288
+ E + + D D I + SG+D+ +RI+C E H
Sbjct: 488 E-----RERLGYSSNPPISLDSD--------------INVQTSGEDVTVRINCPLESH-- 526
Query: 289 KAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKELIKSLSQ 343
S I E+ + V ++++ + D + T + K LT ++LI +LS+
Sbjct: 527 -PASRIFHAFEESKVEVINSNL----EVSQDTVLHTFVVKSEELTKEKLISALSR 576
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 161 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 220
++AA ++ HV AE++RREKL+ RF AL A++P + +MDKA++L DA+SY++
Sbjct: 234 RVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIES 293
Query: 221 LKEQVKTLEEQV-------ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVS 273
LK ++ LE ++ DK ++ S V + S N L E++ ++
Sbjct: 294 LKSKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDL-EVQVKIV 352
Query: 274 GKDILIRIHCE--KHHGKAVSAILVELE 299
G++ +IR+ E H A+ + L+E++
Sbjct: 353 GEEAIIRVQTENVNHPTSALMSALMEMD 380
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 46/57 (80%)
Query: 173 QARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLE 229
+A +HV AER+RREKL+QRF AL AV+P + KMDKA++L DAI+Y+ ++++++ E
Sbjct: 317 EALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYE 373
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 13/156 (8%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 236
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++ +
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE-- 112
Query: 237 VETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSG---KDILIRIHCEKHHGKAVSA 293
L+ ++ +S + +E +V+ K +++ I C K V
Sbjct: 113 ------LESRSTLLENPMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQL 166
Query: 294 ILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKE 329
V LE +L + +T+ F + L T+ Q +E
Sbjct: 167 CKV-LESLNLNILTTNFSSFTSR-LSTTLFLQADEE 200
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 236
HV+AER+RREKL+++FI L +++P + KMDK ++L D I+Y+ L+++V LE ++
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423
Query: 237 VETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCEKHHGKAVSAILV 296
+ KR ++ E+E + D+L+ + CE G + + V
Sbjct: 424 HKRTRTCKR-----------------KTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQV 466
Query: 297 ELEKHHLTVQSTSI 310
H L +++T++
Sbjct: 467 ---LHELGIETTAV 477
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 27/196 (13%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 235
+H L+E+KRREKL++RF+ L +++P + K+DK ++L+D I YL+ L+++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESA 464
Query: 236 TVETAI-FLKR----------------SVVFGDDDGSFSDENSDQSLPEI--EARVS--G 274
ET I +KR S G D DE +D + R+S G
Sbjct: 465 DTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLG 524
Query: 275 KDILIRIHCEKHHG--KAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNL 332
+++I + C G + ++ +L +VQS++ G+ L +T+ + K
Sbjct: 525 NEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSST----GDGLLCLTVNCKHKGTKIA 580
Query: 333 TTKELIKSLSQSLKQC 348
TT + ++L + C
Sbjct: 581 TTGMIQEALQRVAWIC 596
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 27/196 (13%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 235
+H L+E+KRREKL++RF+ L +++P + K+DK ++L+D I YL+ L+++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESA 464
Query: 236 TVETAI-FLKR----------------SVVFGDDDGSFSDENSDQSLPEI--EARVS--G 274
ET I +KR S G D DE +D + R+S G
Sbjct: 465 DTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLG 524
Query: 275 KDILIRIHCEKHHG--KAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNL 332
+++I + C G + ++ +L +VQS++ G+ L +T+ + K
Sbjct: 525 NEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSST----GDGLLCLTVNCKHKGTKIA 580
Query: 333 TTKELIKSLSQSLKQC 348
TT + ++L + C
Sbjct: 581 TTGMIQEALQRVAWIC 596
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 27/196 (13%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 235
+H L+E+KRREKL++RF+ L +++P + K+DK ++L+D I YL+ L+++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESA 464
Query: 236 TVETAI-FLKR----------------SVVFGDDDGSFSDENSDQSLPEI--EARVS--G 274
ET I +KR S G D DE +D + R+S G
Sbjct: 465 DTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLG 524
Query: 275 KDILIRIHCEKHHG--KAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNL 332
+++I + C G + ++ +L +VQS++ G+ L +T+ + K
Sbjct: 525 NEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSST----GDGLLCLTVNCKHKGTKIA 580
Query: 333 TTKELIKSLSQSLKQC 348
TT + ++L + C
Sbjct: 581 TTGMIQEALQRVAWIC 596
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Query: 176 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 235
+HV AER RREKL+ RF AL AV+P + KMDK ++LEDA+ Y+ +LK + + +E +K
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVE---LEK 399
Query: 236 TVETAIFLKRSVVFGDDDGSFSD---ENSDQSLPEIEARV-SGKDILIRIHCEKHH---G 288
F + + G + S E + +IE ++ D ++R+ K H
Sbjct: 400 HAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGA 459
Query: 289 KAVSAIL-VELEKHHLTV 305
+ ++A++ +ELE +H ++
Sbjct: 460 RLMNALMDLELEVNHASI 477
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 46/56 (82%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 232
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 46/56 (82%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 232
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 46/56 (82%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 232
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVAD-- 234
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTP 327
Query: 235 ----------KTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARV-SGKDILIRIHC 283
T +T + + + S Q P +E R+ GK + I + C
Sbjct: 328 PSSSSLHPLTPTPQTLSYRVKEELC--PSSSLPSPKGQQ--PRVEVRLREGKAVNIHMFC 383
Query: 284 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKEL 337
+ G +S + L+ L VQ I F LD+ Q ++++++ +++
Sbjct: 384 GRRPGLLLSTMRA-LDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQI 436
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 174 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 232
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 111
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 174 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 232
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 111
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 77/137 (56%), Gaps = 25/137 (18%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 236
+++AER+RR+KL+ R AL +++P + K+D+A++L DAI+Y+K+L+ + K L++++ + +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
Query: 237 --------VETAIFLKRSVVFG----------------DDDGSFSDENSDQSLPEIE-AR 271
+ + L +VV G D D S++ + P+++ A+
Sbjct: 375 ETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQ 434
Query: 272 VSGKDILIRIHCEKHHG 288
+ G++ +++ CE G
Sbjct: 435 LDGREFFVKVICEYKPG 451
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 174 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 232
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 52 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 110
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
Query: 107 SNVSSVTSSQPFHNMGAANVVKPKMESGFGENLDFAAVISQGAYDDKSFLYNENKLAATA 166
+NVSS + P + GA + V G+G +S+ D +F + +
Sbjct: 42 TNVSSAETFFPSVSGGAVSSV------GYG--------VSETGQDKYAFEHKRSGAKQRN 87
Query: 167 TIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVK 226
+++ + A+ H L+E+KRR K++++ AL ++P K DKA++L++AI YLKQL+ QV+
Sbjct: 88 SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
Query: 227 TL 228
TL
Sbjct: 148 TL 149
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 47/61 (77%)
Query: 174 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVA 233
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIR 112
Query: 234 D 234
+
Sbjct: 113 E 113
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 173 QARDHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAISYLKQLKEQVKTLE- 229
Q +H+ ER RR ++++ +L A+LP +++ D+A+++ AI+Y+K L++ +++LE
Sbjct: 125 QRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES 184
Query: 230 -----EQVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCE 284
+Q + VE A+ + D + D+ +P+IEA V + +++ CE
Sbjct: 185 QKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTC---IPKIEATVIQNHVSLKVQCE 241
Query: 285 KHHGKAVSAILVELEKHHLTV 305
K G+ + I + LEK LTV
Sbjct: 242 KKQGQLLKGI-ISLEKLKLTV 261
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Query: 173 QARD----HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
+ARD H + E+KRREKL++RF+ L ++P + K+DK ++L+D I YL++L+ +V+ L
Sbjct: 434 EARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
Query: 229 E 229
E
Sbjct: 494 E 494
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 173 QARDHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAISYLKQLKEQVKTLE- 229
Q +H+ ER RR ++++ +L A+LP +++ D+A+++ AI+Y+K L++ +++LE
Sbjct: 176 QRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES 235
Query: 230 -----EQVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCE 284
+Q + VE A+ + D + D+ +P+IEA V + +++ CE
Sbjct: 236 QKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTC---IPKIEATVIQNHVSLKVQCE 292
Query: 285 KHHGKAVSAILVELEKHHLTVQSTSI 310
K G+ + I + LEK LTV +I
Sbjct: 293 KKQGQLLKGI-ISLEKLKLTVLHLNI 317
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV---- 232
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 233 -ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLP-------EIEARV-SGKDILIRIHC 283
++ F + +E SLP +E R+ G+ + I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 284 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKK 328
+ G + A + L+ L VQ I F LD+ Q ++
Sbjct: 428 GRRPGLLL-ATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQE 471
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV---- 232
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 233 -ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLP-------EIEARV-SGKDILIRIHC 283
++ F + +E SLP +E R+ G+ + I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 284 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKK 328
+ G + A + L+ L VQ I F LD+ Q ++
Sbjct: 428 GRRPGLLL-ATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQE 471
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV---- 232
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 233 -ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLP-------EIEARV-SGKDILIRIHC 283
++ F + +E SLP +E R+ G+ + I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 284 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKK 328
+ G + A + L+ L VQ I F LD+ Q ++
Sbjct: 428 GRRPGLLL-ATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQE 471
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 161 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 220
+++ T+T R++ A H L+ERKRR+++++R AL ++P K DKA++L++AI Y+K
Sbjct: 274 RVSTTSTKRSRA-AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKS 332
Query: 221 LKEQVKTL 228
L+ Q++ +
Sbjct: 333 LQLQIQMM 340
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 161 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 220
+++ T+T R++ A H L+ERKRR+++++R AL ++P K DKA++L++AI Y+K
Sbjct: 274 RVSTTSTKRSRA-AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKS 332
Query: 221 LKEQVKTL 228
L+ Q++ +
Sbjct: 333 LQLQIQMM 340
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 161 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 220
+++ T+T R++ A H L+ERKRR+++++R AL ++P K DKA++L++AI Y+K
Sbjct: 203 RVSTTSTKRSRA-AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKS 261
Query: 221 LKEQVKTL 228
L+ Q++ +
Sbjct: 262 LQLQIQMM 269
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 236
H L+ER+RR++++++ AL ++P K+DKA++L++AI YLK L+ QV+ + +
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM-------S 400
Query: 237 VETAIFLKRSVVF 249
+ + +L +V+F
Sbjct: 401 MASGYYLPPAVMF 413
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 236
H L+ER+RR++++++ AL ++P K+DKA++L++AI YLK L+ QV+ + +
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM-------S 400
Query: 237 VETAIFLKRSVVF 249
+ + +L +V+F
Sbjct: 401 MASGYYLPPAVMF 413
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 129 PKMESGFGENL---DFAAVISQGAYDDKSFLYNENKLAAT----ATIRNQVQARDHVLAE 181
P ++S E+ D +V + G D++ + ++ A T T + + +++E
Sbjct: 77 PDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISE 136
Query: 182 RKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVA 233
R+RR ++ + AL +++P + KMDKA+++ DA+ Y+++L+ Q K L+ +A
Sbjct: 137 RRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIA 188
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 162 LAATATIRNQVQAR------DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAI 215
+AA R +++AR H +AER RRE++++R AL ++P K DKA++L++ I
Sbjct: 128 VAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEII 187
Query: 216 SYLKQLKEQVKTL 228
Y+K L+ QVK L
Sbjct: 188 DYVKFLQLQVKVL 200
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
H +ERKRR+K++QR L ++P K DKA++L++ I YLKQL+ QV +
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 40/52 (76%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
H L+E++RR +++++ AL +++P K DKA++L++AI YLKQL+ QV+ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLE 229
+A R+RRE++S++ L ++PG KMD A++L++A +YLK L+ QVK LE
Sbjct: 280 QTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 173 QARDHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAISYLKQLKEQVKTLEE 230
Q H+ ER RR +++ +L +++P +++ D+A+++ AI ++K L++Q+++LE
Sbjct: 191 QRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEA 250
Query: 231 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLP----------------EIEARVSG 274
Q KRS D+ ++NS +++ +IEA V
Sbjct: 251 Q------------KRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIE 298
Query: 275 KDILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTT 334
+ ++I C + G+ + +I++ LEK TV +I N ++ + +M+ E NL +
Sbjct: 299 SHVNLKIQCTRKQGQLLRSIIL-LEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGS 357
Query: 335 KELI 338
+ I
Sbjct: 358 ADEI 361
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 169 RNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKK-MDKATVLEDAISYLKQLKEQVKT 227
R Q R H LAER RREK+S++ AL ++PG K + KA VL++ I+Y++ L+ QV+
Sbjct: 157 RGQATDR-HSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
Query: 228 L 228
L
Sbjct: 216 L 216
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKM-DKATVLEDAISYLKQLKEQVKTLEEQVADK 235
H LAER RREK+S+R L ++PG K+ KA +L++ I+Y++ L++QV+ L ++A
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 276
Query: 236 TVETAIFLKR 245
E I + R
Sbjct: 277 NPEINIDIDR 286
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 173 QARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 232
Q +++AER+RR++L+ R L +++P + KMD+ ++L DAI Y+K+L +++ L+++
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE- 233
Query: 233 ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSL----PEIEARVSGKDILIRIHCEKHHG 288
++ + + S +FGD D N+++ L P+ E +D + I C G
Sbjct: 234 -EQELGNSNNSHHSKLFGD----LKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPG 288
Query: 289 KAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQMKKEYNLTTKELIK 339
+S + LE L ++ I F + +L + ++ ++ + T E IK
Sbjct: 289 LLLSTVNT-LETLGLEIEQCVISCFSDFSLQAS-CSEGAEQRDFITSEDIK 337
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 180 AERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 230
AER+RREKL R +AL + +P + M KA+++EDAI+Y+ +L+ VK L E
Sbjct: 36 AERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLE 86
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 173 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
QA D H +AER RRE++++R +L ++P K DKA++L++ I Y+K L+ QVK L
Sbjct: 136 QATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 173 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKM-DKATVLEDAISYLKQLKEQVKTLEE 230
QA D H LAER RREK+S+R L ++PG ++ KA +L++ I+Y++ L+ QV+ L
Sbjct: 197 QATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM 256
Query: 231 QVA 233
++A
Sbjct: 257 KLA 259
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
H LAER+RREK++++ L ++P K K + L+DAI Y+K L+ Q++ +
Sbjct: 260 HNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 163 AATATIRNQVQARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQL 221
A +T R + +A + H LAER+RREK+++R L ++P K K ++LED I Y+K L
Sbjct: 140 ARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSL 199
Query: 222 KEQVKTLEEQVA 233
+ Q+ +A
Sbjct: 200 EMQINQFMPHMA 211
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 173 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
QA D H +AER RRE++++R +L ++P K DKA++L++ I Y++ L+ QVK L
Sbjct: 105 QATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
| chr4:42601-43197 REVERSE LENGTH=198
Length = 198
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 179 LAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLE 229
+ R+RRE++S++ L ++PG KMD A++L++AI Y K LK QV+ L+
Sbjct: 125 VVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-128960
FORWARD LENGTH=912
Length = 912
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 153 KSFLYNENKLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLE 212
KS N + +T+T+ Q+ +A R RR ++S RF L +++PG KMD ++L+
Sbjct: 28 KSETGNTKRSRSTSTLSTDPQS----VAARDRRHRISDRFKILQSMVPGGAKMDTVSMLD 83
Query: 213 DAISYLKQLKEQV 225
+AISY+K LK Q+
Sbjct: 84 EAISYVKFLKAQI 96
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 97/203 (47%), Gaps = 38/203 (18%)
Query: 173 QARDHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAISYLKQLKEQVKTLEE 230
Q H+ ER RR+++++ L +++PG +++ D+A+++ AI ++++L++ ++ LE
Sbjct: 195 QRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLES 254
Query: 231 QVADKTV-ETA-----------------------IFLKRSVVFGDDDGSFSDENSDQ--S 264
Q + + ET + + +V + G +E ++
Sbjct: 255 QKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSC 314
Query: 265 LPEIEARVSGKDILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIV- 323
L ++E ++ G D +I+I + G+ + I LE HL++ T+I T++ T++
Sbjct: 315 LADVEVKLLGFDAMIKILSRRRPGQLIKTI-AALEDLHLSILHTNI-----TTMEQTVLY 368
Query: 324 ---TQMKKEYNLTTKELIKSLSQ 343
++ E T +++ S+ Q
Sbjct: 369 SFNVKITSETRFTAEDIASSIQQ 391
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 173 QARD-HVLAERKRREKLSQRFIALSAVLPGLKK-MDKATVLEDAISYLKQLKEQVKTL 228
QA D H LAER RREK+S+R L ++PG K + KA VL++ I+Y++ L+ QV+ L
Sbjct: 142 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 173 QARD-HVLAERKRREKLSQRFIALSAVLPGLKK-MDKATVLEDAISYLKQLKEQVKTL 228
QA D H LAER RREK+S+R L ++PG K + KA VL++ I+Y++ L+ QV+ L
Sbjct: 142 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>AT4G14410.2 | Symbols: bHLH104 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:8300418-8301503
FORWARD LENGTH=277
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 181 ERKRREKLSQRFIALSAVL-PG-LKKMDKATVLEDAISYLKQLKEQVKTLEE 230
ER RREKL++RF+ LS+VL PG K DK +L+DAI L QL+++ LEE
Sbjct: 133 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE 184
>AT4G14410.1 | Symbols: bHLH104 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:8300077-8301503
FORWARD LENGTH=283
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 181 ERKRREKLSQRFIALSAVL-PG-LKKMDKATVLEDAISYLKQLKEQVKTLEE 230
ER RREKL++RF+ LS+VL PG K DK +L+DAI L QL+++ LEE
Sbjct: 139 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE 190
>AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=379
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 173 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDK-ATVLEDAISYLKQLKEQVKTLEE 230
QA D H LAER RREK++ R L ++PG K+ A VL++ I++++ L+ QV+ L
Sbjct: 210 QATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSM 269
Query: 231 QVADKTVETAIFLKRSVVFGDDDGSFSD 258
++A V I + ++GS D
Sbjct: 270 RLA--AVNPRIDFNLDTILASENGSLMD 295
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVK 226
H L+ER+RR+K+++ AL +LP K D++++L+D I Y+K L+ Q++
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVK 226
H L+ER+RR+K+++ AL +LP K D++++L+D I Y+K L+ Q++
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 171 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 228
+V A+ H AER+RR +++ +F L +LP L K DKA+VL + + Y +LK+ V+ +
Sbjct: 1347 EVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 1404
>AT1G49770.1 | Symbols: RGE1, ZOU | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:18424578-18426531
FORWARD LENGTH=308
Length = 308
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 177 HVLAERKRREKLSQRFIALSAVLPGLK-KMDKATVLEDAISYLKQLKEQVKTLEEQVADK 235
H+ ER+RR+K+ F L A+LP L K DK+T++++A+S +K L++ ++ LE Q +K
Sbjct: 74 HIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEK 133